mRNA_H-canaliculatus_F_contig138.3024.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: D7FQY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY9_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 1.330e-148 Identity = 289/651 (44.39%), Postives = 368/651 (56.53%), Query Frame = 1
Query: 226 MGKKGKGTKKEEKPKKDPVSSKDKLREAPAKSRRLYTSPFAVAVCCGISKKNERSD--VIKVGWTQSFRWDNNEARLASTPVLPPMPRRM-----EQTRIGMLTGASKQPRTALLVDLECLRRGWGRYLDWRCHEDPASLAVVRKSKTLKDGLSGPLTIASMVTKWVSLRSIPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSGRKVHLYLTGPEMSGKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQRGRLDLFQKEETVVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSSVADSRGFNHVWQQVVGAYIVHEAAPSKTPFETSIRPAQAALGKEVCANSYFSIVQGQQPNYSFASQELEEHGGSDDFDGRIMSFRKLCMV--PAGTWPKHVSIRKAGQQSYSIKERAPPLVPLKKYGNYPPEKKEEQAVPIAASSDREASKAGASTAEPTNEDAAESESDPLAVEGSGGTAALAEDGLLSPSXXXXXXXXX--PEKVKLEHSVSRTVDGGSDALEMIVEGVLMTDPATARVGVKRDSIALYYFDCGSLRDVVFEAALPKPVDHSTSKVVFHRSKHSITLVVRLLESNK 2145
MGKKGKGTKKEEKPKK+P+SS+D+L+EA + T+ A A SKK++RS V K+G T+SFRWDN+E PVLPPMP + E RI L+ + +L + LR GW +Y WRC + + + + KSKTLKDGLS PL IA MV+ W+ + +R D E+G PLHIVV+GATAVNEEKILRE++YWDEL + SGR++HLYLTGPEMSGKDGVF K R GQ R RVECWKANG++FFLQ+GRL F+KE+TVVVGLN GFG+A HV + Q SN VLWKWIPTL+F AALDLPLM T SS+AD+ + Q VVG Y + S PF++++ Q V ANS+ +V+GQ+P ++F+ Q L D D R RK P +P H S+RKAG + +E+ LVPLKKYGNYPPEK ++ +DG P KV L++ R DG SD LEM ++ V MT+PA AR+G +R S+ L+Y+DC DVVFEAALP VDH+ +K+VF RS S +V RL ES+K
Sbjct: 1 MGKKGKGTKKEEKPKKEPLSSRDRLKEALEATN--VTTSSASAPRTSSSKKSDRSSSVVTKIGCTESFRWDNSE----EAPVLPPMPTTVHVGGQEGLRIFALSHMMVERSVPILYN-NILRHGWNKYFSWRCGTNALTKSAM-KSKTLKDGLSAPLVIAFMVSVWIHAEAQAKGSSRMDAAENGNPLHIVVIGATAVNEEKILRETNYWDELSNFFSGRELHLYLTGPEMSGKDGVF----HTKPGREEGQAD-------------GPRMRVECWKANGVDFFLQKGRLATFRKEDTVVVGLNCGFGMAGHHVIKNQSPKQALPSNEVLWKWIPTLYFFAALDLPLMITASSLADATTARSMLQYVVGTYELVRITLSPVPFQSTVPGDQV-----VQANSHCILVRGQRPGFNFSVQVLP------DIDPRTEILRKALTNNDPKDNFPLHASVRKAGSHN-DTREQGSELVPLKKYGNYPPEK----------------------------------------------VTSIDDDGATDTHVPAPGTRAGEGPMKVNLKYKFLRMSDGASDTLEMTLQDVFMTEPAQARLGARRRSVVLFYYDCQKFCDVVFEAALPDEVDHTKTKIVFRRSDCSAKVVFRLKESDK 568
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: A0A485LK42_9STRA (Aste57867_20630 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK42_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.680e-11 Identity = 77/311 (24.76%), Postives = 126/311 (40.51%), Query Frame = 1
Query: 565 LRRGWGRYLDWRCHEDPASLAVVRKSKTLKDGLSGPLTI--ASMVTKWVSLRS-IPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSGRKVHLYLTGPEMSGKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQRGRLDLFQKEETVVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSS-VADSRGFNHVWQQVVGAYIVHEAAPSKTPFETSIRPAQAALGKEVC--ANSYFSIVQGQQPNYSFASQELEEHG 1479
L GW YL+ RCH +A+ + + D LS P+T A+ + + +L S +PP + LH++VVGAT E++IL++++YW+EL + L+ GPE+S D R +V ++ F L +V+G N+GFG E +LW W+P L+ +A + +F C++ AD G V +VVGA ++ P + PF + + ANS+ ++QG P + + HG
Sbjct: 85 LALGWQGYLE-RCHSGRNLVAMATQDPSFLDALSFPMTFIYAATLLRLAALNSHLPP-----------DCLHVLVVGATVKAEQRILQQTNYWNELAAFFPHVPLKLWFIGPEVSA------------DTR---------------PSPLPPSMQVGTFRGTAGAFLAAHPFLT---PRHAIVIGYNTGFG-----------NFVESDRFDLLWSWLPDLYAIADSGIAAVFACANDYADLNGEFAVQTRVVGARML--LFPKENPFSAASHLHEEGKKNTAWSRANSFLYVIQGCDPTRRHRLRSGDMHG 340
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: A0A6G0XJT5_9STRA (PIH1_CS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJT5_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.400e-11 Identity = 82/351 (23.36%), Postives = 141/351 (40.17%), Query Frame = 1
Query: 409 WTQSFRWDNNEARLASTPVLPPMPRRMEQTRIGMLTGASKQPRTALLVDLECLRRGWGRYLDWRCHEDPASLAVVRKSKTLKDGLSGPLTIASMVTKWVSLRSIPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSG-RKVHLYLTGPEMSGKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQRGRLDLFQKEETVVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSS-VADSRGFNHVWQQVVGAYIVHEAAPSKTPFETSIRPAQAALGKEVCA----NSYFSIVQGQQPN 1443
++ +FRW + + PP+P+R T +E L +GW YL+ +CH + + + + D LS P+T+ T + L E E +H++++GAT E+++LR++ YWDE+ K++L+ GPE+S + T+ R +V + EF F + V++G N+GFG E S + W W+P L +A LP +F C++ AD G + +V+G+ ++ P + PF + + GK+ A NS+ VQG P+
Sbjct: 19 YSGTFRWTDQKR-------FPPLPQR-----------------TPRRPSVEPLSQGWKGYLE-KCHSVNL-IPLASQDPSFLDALSFPMTLVYAATA-LQLHK-----------EWEESVHVLIIGATVKAEQRVLRQTRYWDEIAAFFPDVSKINLWFIGPEVSTE---------------------------LDLPATSPRLKVRFVHSTAGEFLAAHS--GEFTSKNAVIIGYNTGFG-----------NFVESSRYDLFWSWLPDLMAIADSGLPGIFACANDYADLNGEFAIHTRVIGSKML--LLPKENPFSAASHLHEE--GKKDTAWSRANSFMYAVQGFDPS 287
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: A0A7S2JE84_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JE84_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 3.140e-10 Identity = 67/265 (25.28%), Postives = 111/265 (41.89%), Query Frame = 1
Query: 574 GWGRYLDWRCHEDPASLAVVRKSKTLKDGLSGPLTIASMVTKWVSLRSIPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSGRKVHLYLTGPEMS-GKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQRGRLDLFQKEETVVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSS-VADSRGFNHVWQQVVGAYIVHEAAPSKTPFETS 1362
GW YL+ R D + +R + DGLS LT+ + + L PP PL ++V+GA++ EE+++R+S YW EL L G + L GPE++ G R G +R C+ E + E+T+ VG N+G G A+ ++ +++ W+P L L + L +FTC++ +D RG ++ Q++ A V P K+PF+ +
Sbjct: 7 GWRSYLEMRLPPDASG--TIRVQPPMLDGLSYVLTLLFALQQ---LNLQPPKPG---------PLTLLVIGASSKAEERLMRDSTYWQELRHFLPGTSLELVFVGPEIALAAHGRISRHGPRLTSR--------------------------CFHGTLGELLRKEPH---HTAEDTIAVGFNTGMGNASA--------GMKKGGFSLMKSWLPDLMALLEMGLVGIFTCANDYSDLRGEMAIFSQLLDASFV--LPPCKSPFKAA 218
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: A0A0P1B1J6_PLAHL (Mynd finger family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1J6_PLAHL) HSP 1 Score: 71.6 bits (174), Expect = 2.560e-9 Identity = 73/334 (21.86%), Postives = 133/334 (39.82%), Query Frame = 1
Query: 409 WTQSFRWDNNEARLASTPVLPPMPRRMEQTRIGMLTGASKQPRTALLVDLECLRRGWGRYLDWRCHEDPASLAVVR--KSKTLKDGLSGPLTIASMVTKWVSLRSIPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSGRKVHLYLTGPEMSGKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQ----RGRLDLFQKEE---------TVVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSS-VADSRGFNHVWQQVVGAYIVHEAAPSKTPFETS 1362
++ +FRW ++ P+LPP P R VDL C GW +L R + + V + ++ D LS P+T+ ++ + EL L ++++G++ E+++LR ++YW+E+ + KV L+ GPE+ D R+ N + F L+ +G FQK + +V+VG N+GFG + + +L+ W+P L+ +A ++P +FTC++ AD G V +++GA ++ P + PF +
Sbjct: 42 YSGTFRWLESK----EFPLLPPFPNRS--------------------VDLSC---GWKEFLVSRSSPNSNADLVAKAVNDPSMLDALSFPITLLHVLQQL--------------ELSVDSDLRVLIIGSSRKAEQRVLRITNYWNEISSFFAKAKVTLFFIGPEVDEPDAD----------------------------------RIN----NALPFNLKVHHFKGTFGSFQKSQLYGECAPQASVIVGYNTGFG-----------NFVDSHRHELLFSWLPDLYRIAESNIPAIFTCANDYADMNGEFAVQSRIIGAKML--LLPKQNPFSAA 283
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: A0A7S4BE74_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BE74_CHRCT) HSP 1 Score: 64.3 bits (155), Expect = 6.860e-7 Identity = 71/295 (24.07%), Postives = 114/295 (38.64%), Query Frame = 1
Query: 592 DWRCHED----PASLAVVRKSKTLKDGLSGPLTIASMVTKWVSLRSIPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSGRKVHLYLTGPEMSGKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQRGRLDLFQKEET-------VVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSSV-ADSRGFNHVWQQVVGAYIVHEAAPSKTPFETSI---RPAQAALGKEVCANSYFSIVQG 1431
DWR + + P + +R DGLS PL S++ LR PPS PL+++V+GA++ EE++ RES+YW EL L HLY GPE+S A R RV ++ + +G + +EE+ VVVG N+G G ++ W+P L L +FTC++ +D RG V++ + + + P + PF+ + P + C++ + V G
Sbjct: 133 DWRSYVEARFEPDAHGTIRLDPLALDGLSYPL---SLLRALQVLRLRPPSPG---------PLNLLVIGASSKAEERVWRESNYWQELQHFLPA--THLYFVGPEIS-----------------------------------ADRHRVVDERSATLRATSYKGTVGQLLEEESHLTPANSVVVGFNTGMGSGLW---------------PLMKSWLPDLLLLVRSRFVAIFTCANDWSDLRGEVEVFKTLHAHFALK---PQRNPFKAATIVHEPGDGPRSEWSCSSCFVYAVHG 360
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: A0A7S0PV55_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PV55_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 7.190e-6 Identity = 73/331 (22.05%), Postives = 129/331 (38.97%), Query Frame = 1
Query: 487 MEQTRIGMLTGASKQPRTALLVDLE------------CLRRGWGRYLDWRCHEDPASLAVVRKSKTLKDGLSGPLTIASMVTKWVSLRSIPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSGRKVHLYLTGPEMSGKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQRGRLDLFQKEETVVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSS-VADSRGFNHVWQQVVGAYIVHEAAPSKTPFETSI---RPAQAALGKEVCANSYFSIVQG 1431
ME+ G+ G + + AL L + GW Y++ R D AS + KTL DGLS P+++ S + + LR PP + G PL+I+++GA++ EE++LR+SDYW E+ + + L GPE+ R EC+K + ++ L +++VG N+G G ++ W+P L + +FTC++ +D +G V++ + +++ P F+ + P + C++S+ VQG
Sbjct: 121 MEEPEAGLCVGTLRWDKDALFPPLPKWPGTPPSFSTPLVLTGWRDYIEVRFPAD-ASGTIRVDPKTL-DGLSYPVSLLSAMQR---LRLRPP--------QPG-PLNILIIGASSKAEERLLRDSDYWQEIEHFIPSAR--LIFVGPEID-------------------------RPRHRAVEQCGDALRAECFKGTLGDLLREQSHLS---PANSLIVGFNTGMGSGLW---------------PLMQSWLPDLLTILRGGFVAVFTCANDYSDLKGETQVFKLLRAKFVL---PPQPNAFKAASIVHEPGNGPRPEWSCSSSFVYAVQG 389
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Match: A0A061SFL9_9CHLO (Mitochondrial splicing suppressor protein 51 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SFL9_9CHLO) HSP 1 Score: 59.3 bits (142), Expect = 2.360e-5 Identity = 68/293 (23.21%), Postives = 113/293 (38.57%), Query Frame = 1
Query: 574 GWGRYLDWRCHEDPASLAVVRKSKTLKDGLSGPLTIASMVTKWVSLRSIPPSGTRGDELESGEPLHIVVVGATAVNEEKILRESDYWDELFDLLSGRKVHLYLTGPEMSGKDGVFKRTGKNKDARNNGQXXXXXXXXXXXXXDTAARRRVECWKANGIEFFLQRGRLDLFQKE----ETVVVGLNSGFGVAAMHVCHDDVQSQEESSNAVLWKWIPTLFFLAALDLPLMFTCSSV-ADSRGFNHVWQQVVGAYIVHEAAPSKTPFE--TSIRPAQAALGKEVCANSYFSIVQG 1431
GW + R V L DGLS PLT +LR + +G + S + + I V+GA+ E+++LR++ YWDE+ + G +V L+L GPE+S D+ R + E ++G+ RG F K+ ++VG N+G G + W+ L + +L ++ TC++ D R V ++ +GA+ + P ++PF T+ CANS +QG
Sbjct: 97 GWSDFFSVRLEGAKEKDGRVVVEPPLLDGLSFPLTFL------FALRELLRTGGADKAILSRKTILIGVLGASERAEQRLLRDTSYWDEVGHMFPGSRVELWLVGPEVSA--------------------------------DSPMRPQGE---SSGMAAGCMRGTTGDFLKKMEGRSPILVGFNTGLG---------------SGDGPLRSSWLGDLRMVLERNLLMVLTCANDHTDLRAEREVIEKDLGAH--YALFPRRSPFNAVTTTHLPGRQDDTWACANSIVYAIQG 331 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig138.3024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig138.3024.1 >prot_H-canaliculatus_F_contig138.3024.1 ID=prot_H-canaliculatus_F_contig138.3024.1|Name=mRNA_H-canaliculatus_F_contig138.3024.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=641bp MGKKGKGTKKEEKPKKDPVSSKDKLREAPAKSRRLYTSPFAVAVCCGISKback to top mRNA from alignment at H-canaliculatus_F_contig138:29499..45907- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig138.3024.1 ID=mRNA_H-canaliculatus_F_contig138.3024.1|Name=mRNA_H-canaliculatus_F_contig138.3024.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=16409bp|location=Sequence derived from alignment at H-canaliculatus_F_contig138:29499..45907- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig138:29499..45907- >mRNA_H-canaliculatus_F_contig138.3024.1 ID=mRNA_H-canaliculatus_F_contig138.3024.1|Name=mRNA_H-canaliculatus_F_contig138.3024.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3846bp|location=Sequence derived from alignment at H-canaliculatus_F_contig138:29499..45907- (Hapterophycus canaliculatus Oshoro5f female)back to top |