mRNA_H-canaliculatus_F_contig13771.3007.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI) HSP 1 Score: 313 bits (802), Expect = 7.960e-103 Identity = 181/203 (89.16%), Postives = 188/203 (92.61%), Query Frame = 1
Query: 157 PPPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNEEXXXXXXXXXXXXXXXXXXXXXPP--------QKGVDAVLDLGPRE 741
P PP YVCRRCF+PGHFIQ CPTN+DSSYDNTRLKRVVGIPTSMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQ+RGVGPDSLLPNEEXXXXXXXXXXXXXXXXXXXXX QKGVDA+LDL PRE
Sbjct: 50 PLPPNYVCRRCFKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKGVDAILDLEPRE 252
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE) HSP 1 Score: 303 bits (776), Expect = 1.190e-98 Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 1
Query: 157 PPPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
P PP YVCRRC +PGHFIQ CPTN+DSSYDNTRLKRVVGIPTSMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQSRGVGPDSLLPNE
Sbjct: 60 PLPPNYVCRRCCKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNE 216
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.280e-50 Identity = 86/156 (55.13%), Postives = 120/156 (76.92%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEF-GGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPN 624
PPP YVC+RC +PGH+++ CPTN D +YDNTR KR++G+P++M+++A+ +++GGGLV+A G+ V +++N +AF KLK+ GGG LLD+LS +AP HLKCP+C I+ DAV++PCC S CDSCVR AL A++ M CPLC GV PD L+PN
Sbjct: 243 PPPAYVCKRCSKPGHYVKDCPTNGDPNYDNTRRKRILGVPSTMLQVAE-EQKGGGLVDAMGRRVVLKSNKEAFAKLKDLKGGGGGGAQLLDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALAANS-MQCPLCSRPGVTPDQLIPN 396
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A2D4BX16_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX16_PYTIN) HSP 1 Score: 138 bits (348), Expect = 3.890e-35 Identity = 71/162 (43.83%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
PPP YVC RC PGHFIQ+CPTN D YD R+K+ GIP S +K + G VNA G L + ++ F KL GG + LDRL + P HL CP+C ++M+DAV++PCC +S C+ C+R AL ++CPLC + + P+ LLPN+
Sbjct: 107 PPPNYVCFRCGTPGHFIQNCPTNGDPEYDQHRVKKKPGIPKSFMKAVSDPGEISVGAGKTAVNAPWGGLAVLELQNRNFSKLMAKSGGSAT---LDRLISNPPDHLACPLCKRLMNDAVLIPCCQESACEECLRSAL-IDRKLTCPLCSAPNMSPEKLLPNK 264
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A2D4C9F9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9F9_PYTIN) HSP 1 Score: 141 bits (355), Expect = 2.200e-34 Identity = 72/162 (44.44%), Postives = 97/162 (59.88%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
PPP YVC RC PGHFIQ+CPTN D YD R+K+ GIP S +K + G +VNA G L I ++ F KL GG + LD+L + P HL CP+C ++M+DAV++PCC +S CD C+R AL ++CPLC + + P+ LLPN+
Sbjct: 90 PPPNYVCFRCGTPGHFIQNCPTNGDPEYDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMAKSGGSAT---LDQLISNPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IDRKLTCPLCSAPNMSPEKLLPNK 247
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A8K1C5H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H0_PYTOL) HSP 1 Score: 141 bits (355), Expect = 2.740e-34 Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
PPP YVC RC PGHFIQ+CPTN D +D+ R+KR GIP S +K + G +VNA G L I ++ F KL GG + LD+L + P HL CP+C ++M+DAV++PCC +S CD C+R AL ++CPLC + + P+ LLPN+
Sbjct: 243 PPPSYVCFRCGTPGHFIQNCPTNGDPEFDHHRVKRRTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIETQNKNFSKLMTKSGGSAT---LDQLISNPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IDHNLTCPLCNTPNMSPEKLLPNK 400
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A484DZX4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZX4_BRELC) HSP 1 Score: 140 bits (352), Expect = 6.460e-34 Identity = 72/162 (44.44%), Postives = 97/162 (59.88%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQ---GGG--LVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
PPP YVC RC PGH+IQ+CPTN D +D R+K+ GIP S +K + GGG +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+
Sbjct: 249 PPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGGGKTVVNAPWGGLAVIEPQNKNFSKLMAQSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IDRKLTCPLCSVNNMSPEKLLPNK 406
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD) HSP 1 Score: 139 bits (350), Expect = 7.200e-34 Identity = 70/162 (43.21%), Postives = 97/162 (59.88%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
PPP YVC RC PGH+IQ+CPTN D YD R+K+ GIP S +K + + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++M+DAV++PCC +S CD C+R AL ++CPLC + + P+ LLPN+
Sbjct: 245 PPPNYVCYRCGTPGHYIQNCPTNGDPEYDQHRVKKKTGIPKSFMKAVNDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMAKSGGSAT---LDQFIANPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IEKKLTCPLCNTTNMSPEKLLPNK 402
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA) HSP 1 Score: 137 bits (346), Expect = 8.530e-34 Identity = 70/162 (43.21%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
PPP YVC RC PGH+IQ+CPTN D +D R+K+ GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+
Sbjct: 248 PPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 405
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Match: A0A3R7NI29_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NI29_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.080e-33 Identity = 71/162 (43.83%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 160 PPPGYVCRRCFQPGHFIQHCPTNDDSSYDNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASATMSCPLCQSRGVGPDSLLPNE 627
PPP YVC RC PGH+IQ+CPTN D YD R+K+ GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+
Sbjct: 251 PPPNYVCYRCGTPGHYIQNCPTNGDPEYDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVTNMSPEKLLPNK 408 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13771.3007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13771.3007.1 >prot_H-canaliculatus_F_contig13771.3007.1 ID=prot_H-canaliculatus_F_contig13771.3007.1|Name=mRNA_H-canaliculatus_F_contig13771.3007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=264bp GIGGASAGGPAGGPPGMVMDGMGAGRGGGRGGPGRGGGFFGGGRGGAGGPback to top mRNA from alignment at H-canaliculatus_F_contig13771:14..2848- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13771.3007.1 ID=mRNA_H-canaliculatus_F_contig13771.3007.1|Name=mRNA_H-canaliculatus_F_contig13771.3007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2835bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13771:14..2848- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13771:14..2848- >mRNA_H-canaliculatus_F_contig13771.3007.1 ID=mRNA_H-canaliculatus_F_contig13771.3007.1|Name=mRNA_H-canaliculatus_F_contig13771.3007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1584bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13771:14..2848- (Hapterophycus canaliculatus Oshoro5f female)back to top |