mRNA_H-canaliculatus_F_contig1376.3001.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: A4S0W7_OSTLU (Histone H3 n=6 Tax=Eukaryota TaxID=2759 RepID=A4S0W7_OSTLU) HSP 1 Score: 238 bits (608), Expect = 3.190e-79 Identity = 127/131 (96.95%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTA+LALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 6 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: E1ZR66_CHLVA (Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1ZR66_CHLVA) HSP 1 Score: 238 bits (607), Expect = 4.540e-79 Identity = 127/131 (96.95%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 6 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: A0A7S3FY28_9SPIT (Histone H3 (Fragment) n=7 Tax=Eukaryota TaxID=2759 RepID=A0A7S3FY28_9SPIT) HSP 1 Score: 238 bits (606), Expect = 6.660e-79 Identity = 126/131 (96.18%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct: 6 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: C1BU06_LEPSM (Histone H3 n=6 Tax=Protostomia TaxID=33317 RepID=C1BU06_LEPSM) HSP 1 Score: 237 bits (605), Expect = 9.160e-79 Identity = 126/131 (96.18%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A++ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 6 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: H33_ARATH (Histone H3.3 n=266 Tax=cellular organisms TaxID=131567 RepID=H33_ARATH) HSP 1 Score: 237 bits (604), Expect = 1.300e-78 Identity = 127/131 (96.95%), Postives = 129/131 (98.47%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 6 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: B8CC53_THAPS (Histone H3 n=8 Tax=cellular organisms TaxID=131567 RepID=B8CC53_THAPS) HSP 1 Score: 237 bits (604), Expect = 1.300e-78 Identity = 126/131 (96.18%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIR+YQKST+LLIRK PFQRLVREIAQDFKTDLRFQSTA+LALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 6 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKAPFQRLVREIAQDFKTDLRFQSTAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: A7RJG4_NEMVE (Predicted protein n=6 Tax=Eumetazoa TaxID=6072 RepID=A7RJG4_NEMVE) HSP 1 Score: 237 bits (604), Expect = 1.300e-78 Identity = 126/131 (96.18%), Postives = 129/131 (98.47%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAP GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL+REIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 6 QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLIREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: A5BX39_VITVI (Histone H3 n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A5BX39_VITVI) HSP 1 Score: 237 bits (604), Expect = 1.340e-78 Identity = 127/131 (96.95%), Postives = 129/131 (98.47%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 7 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 137
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: A0A7S0JMT0_9EUKA (Histone H3 n=12 Tax=Eukaryota TaxID=2759 RepID=A0A7S0JMT0_9EUKA) HSP 1 Score: 237 bits (604), Expect = 1.390e-78 Identity = 127/131 (96.95%), Postives = 129/131 (98.47%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 8 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Match: A0A6A4NAB8_LUPAL (Histone H3 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6A4NAB8_LUPAL) HSP 1 Score: 237 bits (604), Expect = 1.490e-78 Identity = 127/131 (96.95%), Postives = 129/131 (98.47%), Query Frame = 1
Query: 1 QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 393
QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 10 QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1376.3001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1376.3001.1 >prot_H-canaliculatus_F_contig1376.3001.1 ID=prot_H-canaliculatus_F_contig1376.3001.1|Name=mRNA_H-canaliculatus_F_contig1376.3001.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=132bp QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYback to top mRNA from alignment at H-canaliculatus_F_contig1376:14173..15352+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1376.3001.1 ID=mRNA_H-canaliculatus_F_contig1376.3001.1|Name=mRNA_H-canaliculatus_F_contig1376.3001.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1180bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1376:14173..15352+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1376:14173..15352+ >mRNA_H-canaliculatus_F_contig1376.3001.1 ID=mRNA_H-canaliculatus_F_contig1376.3001.1|Name=mRNA_H-canaliculatus_F_contig1376.3001.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=792bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1376:14173..15352+ (Hapterophycus canaliculatus Oshoro5f female)back to top |