mRNA_H-canaliculatus_F_contig13759.2999.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13759.2999.1
Unique NamemRNA_H-canaliculatus_F_contig13759.2999.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 3.930e-73
Identity = 112/142 (78.87%), Postives = 128/142 (90.14%), Query Frame = 1 
Query:   10 QGTLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQ 435
            +G LYLSG GY+ERM V+ LHSEP+GV++ LNCF+LHDEHLLP+ E+FC ALNET+SRHEYEDLMNTTFGLV AGR PATYRLAEVMSAGAIPVFV+RD+V+PFPERVDW + SFSFPPEEVGPAM+ TLR+V PAELL MQ
Sbjct:  359 KGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQ 500
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 6.250e-55
Identity = 87/145 (60.00%), Postives = 111/145 (76.55%), Query Frame = 1 
Query:    1 MENQGTLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQ 435
            +  +GTLYLSG G  ERM ++ L  E +GV+++L+CF++HDEHLLP+  ++C AL++    H YE LMN+TFGLV AGRSP TYRL EVMSAG+IPVFV  D+V PF E +DWSSFSF+F P++VGP M+ TLRAV  AEL  MQ
Sbjct:   43 LTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQ 187
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BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 6.910e-51
Identity = 86/153 (56.21%), Postives = 113/153 (73.86%), Query Frame = 1 
Query:    1 MENQGTLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQVRRKKGGR 459
            +  +G+LYLS  G  ERM ++ L  E +GV+++L+CF+LH+EHLLP+  ++C AL++    H YE LMN+TFGLV AGRSP T+RL EVMSAG+IPVFV  D+V PF E +DWSSFSF+F P++VGP M+ TLRAV  AEL  MQ +  K  R
Sbjct:  152 LTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHR 304
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 5.080e-50
Identity = 82/140 (58.57%), Postives = 104/140 (74.29%), Query Frame = 1 
Query:   16 TLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQ 435
            TLY+SG G EER+ +L L  E +GVVV ++CF+ H EHLLP+  +FC AL +    ++Y  LMN+TFGLV AGR PATYRL EVMSAG+IPVFV RD+V PF E++DW S SF+F P+EV   M++TL AV PA+L  MQ
Sbjct:   65 TLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQ 204
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.000e-48
Identity = 83/145 (57.24%), Postives = 108/145 (74.48%), Query Frame = 1 
Query:    1 MENQGTLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQ 435
            +  +G+LYLSG G  ERM ++ L  E +GV+++L+CF++H+EHLLP+  ++C AL++    H Y  LMNTTFGLV AGRSP TYRL EVMSAG+IPVFV  D+V PF E +DWSSFSF+F P++V   M+ TLRAV  AEL  MQ
Sbjct:  248 LTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQ 392
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.340e-48
Identity = 80/143 (55.94%), Postives = 101/143 (70.63%), Query Frame = 1 
Query:   10 QGTLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQV 438
            +GTLYL G G EER  V   H   +GVV  + C ++H + +LP+ +D+C    +    ++YE LMNTTF LV AGRSP ++RL EVMSAGAIPVFV RD +KPF E++DW SFSF F P++VGP M+ TLRAV PA LL MQV
Sbjct:   46 KGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQV 188
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 8.600e-46
Identity = 81/140 (57.86%), Postives = 100/140 (71.43%), Query Frame = 1 
Query:   16 TLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQ 435
            TLY+SG G EER+ +L L  E  GVVV ++CF+ H EHLLP+  +FC AL +    ++Y  LMN+TFGLV AGR PATYRL EVMSAG IPVFV RD+V PF E++DW S SF+F P+EV   M+ TL AV  A+L  MQ
Sbjct:  250 TLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQ 389
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.520e-45
Identity = 79/142 (55.63%), Postives = 101/142 (71.13%), Query Frame = 1 
Query:   10 QGTLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQ 435
            +GTLYL G G EER  V  +H   +GVV  + C ++H +  LP+ +D+C    +    ++YE LMNTTF LV AGRSP ++RL EVMSAGAIPVFV RD +KPF E++DW SFSF F P++VGP M+ TLRAV PA+LL MQ
Sbjct:  351 KGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQ 492
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 5.060e-34
Identity = 84/170 (49.41%), Postives = 97/170 (57.06%), Query Frame = 1 
Query:   10 QGTLYLSGSGYEERMEVLGL---------------------------HSEPDGVVVALNCFDLHDEHLLPQYEDFC-AALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQ 435
            +G LYLSG+G  ER  VL L                            S PD V+V   C + H E LL   +  C A+  E  S   Y DLMNTTF L+ AGRSPATYRLAE +SAGA+PVF+ +D VKPFP ++ WS FSFSFPPEEV P ML TLRAV   EL  MQ
Sbjct:  386 KGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPD-VLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEV-PRMLKTLRAVPDRELAQMQ 553
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Match: D7FXN9_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN9_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.940e-31
Identity = 77/170 (45.29%), Postives = 90/170 (52.94%), Query Frame = 1 
Query:   10 QGTLYLSGSGYEERMEVLGLHS---------------------------EPDGVVVALNCFDLHDEHLLPQYEDFCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVARDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQV 438
            +G+LYL+G+G  ER  VL L                                       C  LH E LL   +  C A         YEDLMNTTF L+ AGRSPATYRLAE +SAGA+PVF+ +D VKPFP +V WS FSFSFPPEE  P +L TLRAV   +L  MQV
Sbjct:  353 KGSLYLTGNGMLERSAVLNLRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCHHLHHEQLLSWNKGLCDASERDFDSVSYEDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGQVPWSEFSFSFPPEEA-PRILETLRAVPDKKLAQMQV 521
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13759.2999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRU9_9PHAE3.930e-7378.87GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G4H3_ECTSI6.250e-5560.00Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H1_ECTSI6.910e-5156.21Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H7_ECTSI5.080e-5058.57Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JGQ8_9PHAE1.000e-4857.24GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LQY4_ECTSI1.340e-4855.94Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5KKV6_9PHAE8.600e-4657.86GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5L9T2_9PHAE3.520e-4555.63GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LNT2_ECTSI5.060e-3449.41Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7FXN9_ECTSI1.940e-3145.29Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13759contigH-canaliculatus_F_contig13759:96..2925 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.9
Seed ortholog evalue6.3e-60
Seed eggNOG ortholog2880.D7FYQ6
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlycosyltransferase, family GT47
Ec32 orthologEc-26_004330.1
Exons2
Model size459
Cds size459
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929115.6506104-CDS-H-canaliculatus_F_contig13759:95..3511622929115.6506104-CDS-H-canaliculatus_F_contig13759:95..351Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13759 96..351 -
1696845684.8596644-CDS-H-canaliculatus_F_contig13759:95..3511696845684.8596644-CDS-H-canaliculatus_F_contig13759:95..351Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13759 96..351 -
1622929115.6722934-CDS-H-canaliculatus_F_contig13759:2722..29251622929115.6722934-CDS-H-canaliculatus_F_contig13759:2722..2925Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13759 2723..2925 -
1696845684.8716779-CDS-H-canaliculatus_F_contig13759:2722..29251696845684.8716779-CDS-H-canaliculatus_F_contig13759:2722..2925Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13759 2723..2925 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13759.2999.1prot_H-canaliculatus_F_contig13759.2999.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13759 96..2925 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13759.2999.1

>prot_H-canaliculatus_F_contig13759.2999.1 ID=prot_H-canaliculatus_F_contig13759.2999.1|Name=mRNA_H-canaliculatus_F_contig13759.2999.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=153bp
MENQGTLYLSGSGYEERMEVLGLHSEPDGVVVALNCFDLHDEHLLPQYED
FCAALNETSSRHEYEDLMNTTFGLVAAGRSPATYRLAEVMSAGAIPVFVA
RDIVKPFPERVDWSSFSFSFPPEEVGPAMLATLRAVAPAELLVMQVRRKK
GGR
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mRNA from alignment at H-canaliculatus_F_contig13759:96..2925-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13759.2999.1 ID=mRNA_H-canaliculatus_F_contig13759.2999.1|Name=mRNA_H-canaliculatus_F_contig13759.2999.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2830bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13759:96..2925- (Hapterophycus canaliculatus Oshoro5f female)
ATGGAAAACCAGGGCACTCTCTATCTCTCTGGGTCTGGGTACGAAGAGCG
GATGGAGGTGCTTGGGCTGCACTCGGAGCCGGACGGAGTCGTCGTGGCGC
TGAACTGCTTCGACCTCCACGACGAGCACCTGCTCCCGCAGTACGAGGAC
TTCTGCGCGGCGCTGAACGAGACGTCCTCGCGGCACGAGTACGAAGACCT
CATGTGAGCGCACGAGAAGCACCCTCAACTTGTGTCCGTTGTGCCTGCAA
GGTTTCCCGCGGCTCCCGCCCGCCGCCTCACACACACGCCACGCTCGGCG
AGGCGATGCCCAAGATGCATTGCCGCGGGGCACGCCGTCGTCGCGTGTGT
GTGAGGCCAGAGCGATGTGCGCGTCCGCACCCGCCATGAAAGGCTGCCCG
GAAGAGTAGACAGAGGTGGAACGCACCTCGGCCAGTGCGTAACGGACGAA
GAGTTCGCCGGGCGCCCGGCAGACTAGGTTTGACGGATAGGTTCGGGATG
AACAAAGTATTTCGTACGATGCCCTGCAGAGGAGGAGTTGAAAGGTCCGG
AAAGAACGAAGCGAACCGCGCCTGGGCGTGAAATGCAGTTGCGCGCACCC
GCCCCCCCGGAACAGCCTCTGGTCATCACCGCTGGTGAAGGGCTGCACAA
TAGAGAGAGACGACCGACAAACTCTGAGAACCAACCCAAGATTCGCGAAA
TAAAGTCGAGATTGGGCGGGTTGATTCGGAACGAACGTAGAGTCTCCTCA
CAATTCCCTGAAGAGGAGGAACTGGAAGATTCAGGACGAGCATAGCATTA
ACACGCGCCCGCATTCGAAAGAGATTTATTTCACTGCGTGCCCTTTTGGA
AGAATCTCCTGATTGAAAGTGGAGTGACCGCCCAGAGTAGGAGAGGTTGT
GCCGGCAAGGTGAAAGCAGAGCTCAAGGGATTGCCCAGCAGCAGAGACGT
CGCCGGGTTGGGCACTAAGCCTCCTGCACAGATAGCACTCTCAACCTGAT
CGAAGTGATATGGAACATGGCTTCAACGCGAAAGAGAAGTGGGCTCGCCC
GCCCGGGTTACCATTGCCATCGAAACCGACTGTGGCAGCAGACAGGGAAA
AGGGCTAAAGGGACTGCCCAGTAGAGGCGTCGCCGAGTCAAATACTTTGA
CCTGCTGCGCGAATAGCAGGTCTCAAGTTAAGCCAAATGGCACATAAGAA
CATGCGTCTGATTCCAAGTGAAACACGACCTGGGAATACTGCGCTCAAAG
CGCTCTCGCCAAGCGAACGCTGGCCTGTGAGCCGCCTAGAGAGTTTTCGT
GTTGAACCCAGCAAAAACGATAAACGAAAAAATTGTTACGGAAAAAGTAG
CATTTTGTTGGTCCCCCTCTTGTTGATTTTTCTCTGACATGGGGAGCAAG
AAAGTCACCGTTGCGGACAGACACACGGGGCACGGCAGAATTCCCAGTGC
CTACTTGTAGTGCTACCGACGTGGGGGAGAGGGACTTTCCCCTCTTCACG
CTTTTCTTGCGTTTTGTTCCAAGAGTTAACCCAAGTGGTACATGCGCAGT
CGACTTGACCAAAACTTCAGCAAAACCTGACGGGAATTCGTGTGCAGCGT
TGAGGATCAGCTGCATCTTCTCTAGAATCGAACGTAGATCGAGAGGGGCA
GGAGCGGCGGACGGGGGAACTGCTGAAGTTGAAGCCGCGGACGCGATAGC
GGCGGGGCTCTATGCGTCTGAGACACCGGCGGGGTTGACGGCACCGCCAC
CGAAAGAAGCGGGCGTCTCGCTGAGGTTGAGGTTGGGTAGCTGGGGAGGG
CCAGCATCGGTAGCCCTGCCGTCCTCGGCAGCGTGCGGGGGTATGGTGGG
GTCGTCTCCCCGACGTTCCTCGACCGTTGCAGAGAAACGCTTTGCTGAGC
TTGAAATCATGTCTCAACGCGCAAATCGAGGTTACGATTGCAGTCGACGC
CAAATAAGAGTGGGACACGCCAGCAAGGAAGCCGTCGGAGGGACAGGATC
CCTCTTCGCTCTACCGACGACAGACTACTCTGACAATTGAGGCCGCGACG
ACGCGTTGTGGACGGGCTCGGGACGAGCGGGACCGGAATAGATCACGACG
AAGAGTGGGGGCGAGGGTCGACGCCTTGCTCCATGTCGCATCACGGCTAT
CCATCGTTGCTATCGCCAAGGGGAGAGTTCGTGGAGCATGCCCCAGAGCG
GTTGTTGTGTGGCGTGCGAAGTCGGAGAGTCGACATCTCACCGAAGCCGC
ACGGGCAAGACAAGGCCCCGAGATGCCTCTGATGTCTCTAGAGGAGAACG
TGGAGAGCATTTTTTGGCTCAATAGAACTTTGCAGCGAGAGGGACGTACG
GAGGCGTGTTAGTTGAGCAGGGGTTCGGATCCCCAGCACAGACAAACATG
AACCGACGCGCGCCAGGGTGCATGCATGAAAGGCACGAAGTGCTGACAAA
AACCCTTGATTTCGATCCTCTTATTAAAAAAAAACACATAGCAACACCGC
AGGAACTCCTCCTAAGGTACTTCCCCCCCTTCCCCCACCCAAAAACCCGT
GGCCGCGGCGCGCGCTCCGTTCAGGAACACGACGTTCGGCCTGGTTGCCG
CGGGGCGGTCCCCCGCGACGTACCGCCTGGCCGAGGTCATGAGCGCCGGC
GCCATCCCCGTGTTCGTGGCCAGGGACATCGTCAAGCCCTTCCCGGAGAG
GGTGGACTGGTCGTCGTTCTCCTTCTCGTTCCCGCCCGAAGAGGTCGGGC
CGGCCATGCTGGCGACCCTAAGGGCGGTCGCGCCGGCGGAATTGCTGGTG
ATGCAGGTGAGGAGAAAGAAGGGGGGACGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13759:96..2925-

>mRNA_H-canaliculatus_F_contig13759.2999.1 ID=mRNA_H-canaliculatus_F_contig13759.2999.1|Name=mRNA_H-canaliculatus_F_contig13759.2999.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=918bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13759:96..2925- (Hapterophycus canaliculatus Oshoro5f female)
ATGGAAAACCAGGGCACTCTCTATCTCTCTGGGTCTGGGTACGAAGAGCG
GATGGAGGTGCTTGGGCTGCACTCGGAGCCGGACGGAGTCGTCGTGGCGC
TGAACTGCTTCGACCTCCACGACGAGCACCTGCTCCCGCAGTACGAGGAC
TTCTGCGCGGCGCTGAACGAGACGTCCTCGCGGCACGAGTACGAAGACCT
CATATGGAAAACCAGGGCACTCTCTATCTCTCTGGGTCTGGGTACGAAGA
GCGGATGGAGGTGCTTGGGCTGCACTCGGAGCCGGACGGAGTCGTCGTGG
CGCTGAACTGCTTCGACCTCCACGACGAGCACCTGCTCCCGCAGTACGAG
GACTTCTGCGCGGCGCTGAACGAGACGTCCTCGCGGCACGAGTACGAAGA
CCTCATGAACACGACGTTCGGCCTGGTTGCCGCGGGGCGGTCCCCCGCGA
CGTACCGCCTGGCCGAGGTCATGAGCGCCGGCGCCATCCCCGTGTTCGTG
GCCAGGGACATCGTCAAGCCCTTCCCGGAGAGGGTGGACTGGTCGTCGTT
CTCCTTCTCGTTCCCGCCCGAAGAGGTCGGGCCGGCCATGCTGGCGACCC
TAAGGGCGGTCGCGCCGGCGGAATTGCTGGTGATGCAGGTGAGGAGAAAG
AAGGGGGGACGAGAACACGACGTTCGGCCTGGTTGCCGCGGGGCGGTCCC
CCGCGACGTACCGCCTGGCCGAGGTCATGAGCGCCGGCGCCATCCCCGTG
TTCGTGGCCAGGGACATCGTCAAGCCCTTCCCGGAGAGGGTGGACTGGTC
GTCGTTCTCCTTCTCGTTCCCGCCCGAAGAGGTCGGGCCGGCCATGCTGG
CGACCCTAAGGGCGGTCGCGCCGGCGGAATTGCTGGTGATGCAGGTGAGG
AGAAAGAAGGGGGGACGA
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