mRNA_H-canaliculatus_F_contig1373.2983.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1373.2983.1 vs. uniprot
Match: D7FZR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI) HSP 1 Score: 775 bits (2002), Expect = 1.090e-276 Identity = 424/502 (84.46%), Postives = 455/502 (90.64%), Query Frame = 1
Query: 520 MDFTFARFALNMAMASSRTKPEVMLDAGAPAFLVGMLSNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTCRSPAVLVQACISIAQLSRYAPNRAIIAGKGGVAAMVRLLEGFRKEDRVTVQVIGHALSALVNLMFRSDANRGLAEECGATDPTITIMDAVDDEEVLVQACLALANMAYVNPFAALRLLEAGADKAACDLIKDSDKTRHSDVLEAAFICLANLANNPLNQAHVGAGGSVELALTVCKHCESARVVRAAALTLCSLTLKNQANKTRCASLGAVPILLDIATMWGIADDGSNXXXXXXXXXXXXXXXXXXXXXX---------AASCVAILMQHPTNAHAMNRAGGLKQLAELIFDSEHSGVITATSKAIVVLIPEPSELIRTFRNGQVSQAEEAGAHEALMRCREWAFGRTAPPSWLAYALDLLGCEVSALEARLHQEGASAFRKPEEFFVSTEFFVERETAIPPDITLTQDEDLGGMLFHVF 1998
MDFTFARFALNMA+ASSRT+PEVML AGAPAFLVGML+NPNELVTGPAVLALSQMAHHEACQRALGLAGG+PPLVLLCFT +SPAVLVQACISIAQLSRY PNRAIIA KGGVAAMVRLLEGFR+ED VT QVIG AL+ALVN+ +RSDANRGL EECGAT PTITIMDA+D+E VLVQACLALANMAY+N FAALRLLEAGADKAACDLI+DSDKTRHSDV+EAAFICLANLANNPLNQAHVGAG SVELAL+VCKHC+SARVVR+AA LCSLTLKNQANKTRCASL AV ILL++A WG+A+D XXXXXXXXXXXXXXXXXXXXXX AASCVAILMQHPTNA AM RAGGLK+LAELIFDSEHS VITAT+KAIVVL+P+P EL+RTFRNGQVSQAEEAGA+EAL+RCREWAFGR APPSWLAY LDLLG E+ LEARL QEG FRKPEEFFV T+FF ERETAIPPD+TL QDEDLGGMLFHVF
Sbjct: 1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYLNQFAALRLLEAGADKAACDLIRDSDKTRHSDVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKELAELIFDSEHSEVITATAKAIVVLLPDPEELVRTFRNGQVSQAEEAGAYEALVRCREWAFGRRAPPSWLAYGLDLLGAEIEGLEARLKQEGGGQFRKPEEFFVPTDFFEERETAIPPDVTLAQDEDLGGMLFHVF 502 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1373.2983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1373.2983.1 >prot_H-canaliculatus_F_contig1373.2983.1 ID=prot_H-canaliculatus_F_contig1373.2983.1|Name=mRNA_H-canaliculatus_F_contig1373.2983.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=667bp MDTSSPITRDRKVSQGPAWGLKEQLRRRGKDAKGMCSTTVEQTRKDPTSPback to top mRNA from alignment at H-canaliculatus_F_contig1373:1767..13094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1373.2983.1 ID=mRNA_H-canaliculatus_F_contig1373.2983.1|Name=mRNA_H-canaliculatus_F_contig1373.2983.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=11328bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1373:1767..13094- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1373:1767..13094- >mRNA_H-canaliculatus_F_contig1373.2983.1 ID=mRNA_H-canaliculatus_F_contig1373.2983.1|Name=mRNA_H-canaliculatus_F_contig1373.2983.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4002bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1373:1767..13094- (Hapterophycus canaliculatus Oshoro5f female)back to top |