mRNA_H-canaliculatus_F_contig1363.2923.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: D7FPI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI4_ECTSI) HSP 1 Score: 150 bits (379), Expect = 2.770e-41 Identity = 81/84 (96.43%), Postives = 84/84 (100.00%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQLLLSDDH 252
MD+FNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRT+IMRSSGLRVEQLKAELDQLL+SDDH
Sbjct: 1 MDEFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTEIMRSSGLRVEQLKAELDQLLISDDH 84
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: A0A7S2CH79_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH79_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 7.150e-20 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQLLLSDDH 252
+D NDLFV AREE+E AEESKETTY+DEEA A+EAVE A+A + ++L S++E R + R +GL++EQLKAEL+ LL SDDH
Sbjct: 16 VDSLNDLFVEAREEIEMAEESKETTYYDEEAEIAQEAVEAALAEYGDILNSLEEPARGEFQRGNGLKMEQLKAELEILLHSDDH 99
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: A0A836C9H1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9H1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 4.580e-19 Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQLLLSDDH 252
MD+FNDLFV AREE++YA ESKETTYF++E AA+ AVE A+ F E+L V+E+++ IMRS+GL+VEQLK EL L++ +H
Sbjct: 72 MDEFNDLFVEAREEIQYAGESKETTYFNDEVKAAQAAVESALECFSELLNGVEEEQKQAIMRSNGLKVEQLKQELQLLMIEHEH 155
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: A0A484LV25_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LV25_9ASTE) HSP 1 Score: 77.8 bits (190), Expect = 3.640e-14 Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQL 234
+D+ N F AREE+E A ESKET YFDEEA A++AV E + L+E +L + EK+R I RS GL++EQLKAEL+QL
Sbjct: 10 VDEINLKFAEAREEIESAMESKETLYFDEEAECARKAVNEVLELYEGLLEKLPEKEREAIQRSMGLKIEQLKAELEQL 87
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: A0A328DSJ9_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DSJ9_9ASTE) HSP 1 Score: 78.2 bits (191), Expect = 1.440e-13 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQL 234
+D+ N F AREE+E A ESKET YFDEEA A++AV E + L+E +L+ + EK+R I RS GL++EQLKAEL+QL
Sbjct: 75 VDEINLKFAEAREEIESAMESKETLYFDEEAECARKAVNEVLELYEGLLQKLPEKEREAIQRSMGLKIEQLKAELEQL 152
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: UPI00053C3B28 (uncharacterized protein LOC104810483 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3B28) HSP 1 Score: 78.2 bits (191), Expect = 1.860e-13 Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQL 234
+D+ N F AREE+E A ESKET YFDEEA A+ AV E V +FE +LR + E +R + RS GL++EQLKAEL QL
Sbjct: 86 VDEINMKFAEAREEIEMAMESKETVYFDEEAECARAAVAEVVEMFERLLRRLPEGQRAAVQRSMGLKIEQLKAELQQL 163
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: A0A7S4JN07_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JN07_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.090e-13 Identity = 44/84 (52.38%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQLLLSDDH 252
+D+F DLFV AR +E +S +TTYFDEEA AAKEAV+EAV+ F+ ++ +DE+ + +MR +GL+V QLK ELD L+L+ H
Sbjct: 86 LDEFQDLFVEARLSIEDCADSADTTYFDEEAEAAKEAVDEAVSAFDTLIGELDEETKGRVMRQNGLKVAQLKGELD-LVLNGGH 168
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: A0A8B8MI30_ABRPR (uncharacterized protein LOC113873100 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8MI30_ABRPR) HSP 1 Score: 77.0 bits (188), Expect = 3.940e-13 Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQL 234
+D N F AREE+E A ESK+T YFDEEA A+ AV E V LFEE+L + E++R + RS GL++EQLKAEL QL
Sbjct: 78 VDTINLKFAEAREEIEMALESKDTVYFDEEAECARAAVNEVVGLFEELLAKLPERERGALQRSMGLKIEQLKAELQQL 155
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: UPI001C4FFF6E (embryogenesis-like protein n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FFF6E) HSP 1 Score: 73.2 bits (178), Expect = 1.400e-12 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQL 234
+D+ N F AREE+E A ESKET YFDEEA +A+EA + + +F+ +L + E +R + RS GL++EQLKAEL+QL
Sbjct: 5 IDEINLKFAEAREEIEMALESKETVYFDEEAESAREAAKVVLDMFQGLLAKLPENERASLQRSMGLKIEQLKAELEQL 82
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Match: UPI000B8CE0DF (uncharacterized protein LOC110818135 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CE0DF) HSP 1 Score: 75.9 bits (185), Expect = 1.760e-12 Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 1 MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTDIMRSSGLRVEQLKAELDQL 234
+D N FV AREE+E A ESKET YF+EEA A+ AV+E V LFE +L + E ++T I RS GL++EQLKAEL QL
Sbjct: 103 VDMINLKFVEAREEIEMAMESKETVYFNEEAECARAAVKEVVELFEGLLGKLPESEKTAIQRSMGLKIEQLKAELQQL 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1363.2923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1363.2923.1 >prot_H-canaliculatus_F_contig1363.2923.1 ID=prot_H-canaliculatus_F_contig1363.2923.1|Name=mRNA_H-canaliculatus_F_contig1363.2923.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=85bp MDDFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRback to top mRNA from alignment at H-canaliculatus_F_contig1363:11846..14665- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1363.2923.1 ID=mRNA_H-canaliculatus_F_contig1363.2923.1|Name=mRNA_H-canaliculatus_F_contig1363.2923.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2820bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1363:11846..14665- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1363:11846..14665- >mRNA_H-canaliculatus_F_contig1363.2923.1 ID=mRNA_H-canaliculatus_F_contig1363.2923.1|Name=mRNA_H-canaliculatus_F_contig1363.2923.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=510bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1363:11846..14665- (Hapterophycus canaliculatus Oshoro5f female)back to top |