mRNA_H-canaliculatus_F_contig13594.2900.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE) HSP 1 Score: 324 bits (831), Expect = 2.740e-103 Identity = 170/197 (86.29%), Postives = 178/197 (90.36%), Query Frame = 1
Query: 7 SFRACVTLFVRLSAKVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAATGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
+F V +F+R +VLVLAGPGVMAATI+MA FSK++ PY WDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDA+TG GSTS VV QFVRLGLGGP VGF TGMIGSF IGYILEDHLSEITCTVVVCFSAFLLAEAT LRVSGILSVVIAGLYMSFYGRPRISPSVQ
Sbjct: 130 AFFTDVHIFLREMWQVLVLAGPGVMAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDASTGIGSTSVGHVVAQFVRLGLGGPAVGFFTGMIGSFAIGYILEDHLSEITCTVVVCFSAFLLAEATILRVSGILSVVIAGLYMSFYGRPRISPSVQ 326
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI) HSP 1 Score: 279 bits (713), Expect = 2.410e-83 Identity = 145/172 (84.30%), Postives = 154/172 (89.53%), Query Frame = 1
Query: 7 SFRACVTLFVRLSAKVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAATGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVS 522
+F V +F+R +VLVLAGPGV+AATI+MA FSK++ PY WDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDA+TG GSTS VVTQFVRLGLGGP VGF TGMIGSF IGYILEDHLSEITCTVVVCFSAFLLAEATPLR S
Sbjct: 63 AFFTDVHIFLREMWQVLVLAGPGVLAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDASTGIGSTSVGHVVTQFVRLGLGGPAVGFFTGMIGSFAIGYILEDHLSEITCTVVVCFSAFLLAEATPLRES 234
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI) HSP 1 Score: 219 bits (558), Expect = 3.030e-64 Identity = 114/197 (57.87%), Postives = 143/197 (72.59%), Query Frame = 1
Query: 7 SFRACVTLFVRLSAKVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAATGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
+F V +F R +V+ LAGPGV ATI+ A+ K++ PYGWDWN L G + SATDPVAVVAL+K+LGVSERL VLIEGESLLND T IVVF VF DA G +S + V+ VR+ GGP VG GM GSF++GYI++D ++EIT TV+VCFS+F+++EAT L VSG+L+ V AGL MSFY RISP V+
Sbjct: 26 AFETDVHIFQREFWQVVTLAGPGVAIATIITASIVKYVFPYGWDWNLSLMLGGILSATDPVAVVALLKDLGVSERLNVLIEGESLLNDATGIVVFIVFRDAFVGVADSSPAQVLVTAVRMSFGGPMVGLALGMFGSFLLGYIIDDAMTEITVTVIVCFSSFIISEATTLHVSGVLAAVTAGLVMSFYAGGRISPGVE 222
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: A0A6H5LPB6_9PHAE (Na_H_Exchanger domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LPB6_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.500e-56 Identity = 100/196 (51.02%), Postives = 139/196 (70.92%), Query Frame = 1
Query: 7 SFRACVTLFVRLSAKVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAATGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSV 594
+F A + R +++ LAGPGV+ L A F KF+LPY WDWN + FG+M +ATDPVAVVAL++ELGVSE+L LIEGESLLNDG++IVVF VF +A G S + V+ RL LGGP +G + G++G+FV+GY++ D L E++ TV++ FS F L EAT ++VSG+L +V G+ +S+YG+PR+S V
Sbjct: 114 AFNAQFHILERRLGQIIFLAGPGVILGAGLTAVFMKFVLPYDWDWNLSMVFGSMVAATDPVAVVALLEELGVSEKLGTLIEGESLLNDGSAIVVFEVFLEAVEGH-SRNWHEVIEFGARLALGGPAIGAVIGIMGAFVLGYVINDALVEVSLTVLLAFSTFALCEATRVKVSGVLGIVACGVVLSYYGKPRVSSPV 308
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: A0A7S1UK40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK40_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.130e-53 Identity = 106/190 (55.79%), Postives = 133/190 (70.00%), Query Frame = 1
Query: 28 LFVRLSAKVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAATGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
+F R +++VLVLA PGV+ AT+L A +LPY + +N + FGAM SATDPVAVVALMKELGVSERLA L+EGESL NDGTSIV+F VF DA TGA + +A ++ F+RL LGG G G I YIL D +SEIT T++ F AFL+AEAT L VSG+++VV+ G MS G+ R SP V+
Sbjct: 115 IFAREASQVLVLAVPGVIMATLLTALIVWRVLPYNFPFNASMMFGAMLSATDPVAVVALMKELGVSERLATLMEGESLFNDGTSIVLFEVFRDALTGAANRNAGELIAFFLRLALGGAVAGIAVGAACVIAISYILHDGMSEITITIIGAFGAFLVAEATGLHVSGVIAVVMVGFLMSHVGKARFSPGVE 304
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: A0A7S2SQN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQN5_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.120e-52 Identity = 96/187 (51.34%), Postives = 125/187 (66.84%), Query Frame = 1
Query: 49 KVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAA----TGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
+VL LAGPGV+ +T L A F K++ YGW W CL FG+M SATDPVAVVAL K+LGV++RL LIEGE L+NDG++IV+F++ A T SA VVT ++L LGGP VG + + D SE+T TVV C++ FL+AE + L VSG+L+VV AGLY+SFYGR +IS V+
Sbjct: 163 QVLFLAGPGVIVSTFLTALFVKYVFNYGWSWTLCLLFGSMMSATDPVAVVALFKDLGVNQRLGTLIEGEGLMNDGSAIVIFNICLAAIEKRRTNNAGLSAGDVVTTALQLSLGGPVVGLVLXXXXXXXXXXXINDLKSEVTLTVVGCYACFLVAEGSKLHVSGVLAVVFAGLYLSFYGRGKISIKVE 349
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: A0A836CJL4_9STRA (Cation/H+ exchanger (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL4_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.060e-50 Identity = 90/183 (49.18%), Postives = 124/183 (67.76%), Query Frame = 1
Query: 49 KVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAATGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
+VL LA P V+ + L A F K+ LPY W W CL G++ S TDPVA VAL+KELGVSE L+ L+E SL NDG++ V+F +F A G T+ V F+R LGGP +GF+ G+ + + I+ D L+EIT T+V+C+S +L+AE TP+ VSG+L+VV+ GL +S +GRP +SPSVQ
Sbjct: 31 QVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGD-VPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQ 212
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: A0A7S3JZM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM7_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.850e-50 Identity = 100/195 (51.28%), Postives = 133/195 (68.21%), Query Frame = 1
Query: 28 LFVRLSAKVLVLAGPGVMAATILMATFSKFI-LPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAAT----GAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
+F R+ ++L LAGPGV+ AT+L A F+K++ + Y WDW TCL FGA+ SATDPVAVVAL+KELGVSERL LIEGESLLNDGT+IV+F VFF+A A ++ RL GP VG + G I + ++G +L D +EI T++ C+++F +A+ + SG+LSVV GLYMS YGR RIS V+
Sbjct: 91 IFARIRTQILSLAGPGVLVATVLTAIFTKYVFVAYEWDWPTCLMFGAILSATDPVAVVALLKELGVSERLGTLIEGESLLNDGTAIVIFDVFFEALEKRPCSPSMPQALHIIELIFRLAALGPIVGVIIGFICTSLLGAVLNDPYNEIAITLLACYASFGIAQGV-INTSGVLSVVCCGLYMSRYGRGRISADVE 284
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: F0Y140_AURAN (Na_H_Exchanger domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y140_AURAN) HSP 1 Score: 181 bits (459), Expect = 7.180e-50 Identity = 106/195 (54.36%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 28 LFVRLSAKVLVLAGPGVMAATILMATFSKFILP-YGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAAT----GAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
+F R ++L LAGPGV+ A+IL F K + YGWDW T L FGAM SATDPVAVVAL+KELGVSERL LIEGESLLNDGT+IVVF VF A A S V+ RLG GP VG G + ++GY+L D L+EIT T++ C++AF +AE + SG+LSVV AG+Y+S YGR RIS V+
Sbjct: 83 IFSRQKWQILTLAGPGVLVASILTGGFVKAVFTDYGWDWPTVLMFGAMMSATDPVAVVALLKELGVSERLGTLIEGESLLNDGTAIVVFDVFKHALEHKPCDAEMPSWQSVLRMLFRLGALGPVVGTAIGWCAATLLGYVLNDPLNEITITLITCYAAFAVAEGI-VGTSGVLSVVFAGMYLSRYGRGRISADVE 276
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Match: A0A835Z8G2_9STRA (Sodium/hydrogen exchanger family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G2_9STRA) HSP 1 Score: 180 bits (457), Expect = 6.290e-49 Identity = 94/192 (48.96%), Postives = 131/192 (68.23%), Query Frame = 1
Query: 22 VTLFVRLSAKVLVLAGPGVMAATILMATFSKFILPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDAATGAGSTSASFVVTQFVRLGLGGPCVGFLTGMIGSFVIGYILEDHLSEITCTVVVCFSAFLLAEATPLRVSGILSVVIAGLYMSFYGRPRISPSVQ 597
V +F+R V V+A G A +L A F+ ++LPYGWDW T L+FGA+ SATDPVAVVA ++E G RL++L+E E+LLN+ +V+FS+FF+A+ S F V Q +RL GG +G G I + +IGYILED +SE++ +V ++AFLL +ATPL VSG+ +++ GLY+S YG PRIS SVQ
Sbjct: 108 VNMFMREVWHVSVVAVIGATVAALLTALFAHYMLPYGWDWYTALYFGAICSATDPVAVVAKLREKGSCMRLSILVEAEALLNNALMVVLFSIFFNASAAIHDISGGFFVVQSIRLLGGGVVLGICVGAISASIIGYILEDPVSELSVVIVAGYAAFLLGDATPLHVSGVTALITCGLYLSVYGMPRISLSVQ 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13594.2900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13594.2900.1 >prot_H-canaliculatus_F_contig13594.2900.1 ID=prot_H-canaliculatus_F_contig13594.2900.1|Name=mRNA_H-canaliculatus_F_contig13594.2900.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=199bp MPSFRACVTLFVRLSAKVLVLAGPGVMAATILMATFSKFILPYGWDWNTCback to top mRNA from alignment at H-canaliculatus_F_contig13594:410..2042+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13594.2900.1 ID=mRNA_H-canaliculatus_F_contig13594.2900.1|Name=mRNA_H-canaliculatus_F_contig13594.2900.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1633bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13594:410..2042+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13594:410..2042+ >mRNA_H-canaliculatus_F_contig13594.2900.1 ID=mRNA_H-canaliculatus_F_contig13594.2900.1|Name=mRNA_H-canaliculatus_F_contig13594.2900.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1194bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13594:410..2042+ (Hapterophycus canaliculatus Oshoro5f female)back to top |