mRNA_H-canaliculatus_F_contig1355.2872.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 796 bits (2056), Expect = 4.470e-272 Identity = 417/728 (57.28%), Postives = 498/728 (68.41%), Query Frame = 2
Query: 590 NGYECMDPDAACAGEADILCGSPQ-----DIGNGYCDIENNKEDCAYDGGDCCECTCVG-------EIFSDEFFSYSSCANNFACIDPEAPCVNDDDITVDTPAICDRV-GMGNAICNDYNNNAECGYDGGDCCECTCI----------DRLXXXXXXXXXXFACVDPDAACVNDDDVTIDMIDICDTATLGDSLCDEVNNNAECNYDDGDCCECTCIPDDSKEDDYYGCGQNNGFACIDPDAPCVDDDDITVDMGDSCDTTY-IGNGWCDPSNNKAECGFDGGDCCECTCTVDGPQGDDDDRCGQDSGFACIDPSAPCVDDSSITVGMIDICNTA-DMGNGFCDDENNNGDCAYDGGDCCECTCDGP-EDDSCMYGFACIDPDAACVNDDDITADMLENCGFVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLRSYTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAG-FDCKDEAAPCFGEESTINGYDD---DDDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEVHFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEVLIFVTP 2683
+G+ C+DPDA+C + DI Q ++G+GYCD +NN E C YDGGDCCECTCV D+ + SS + FACIDP APCV DDDIT D C V G+G+ C++ NNN CGYDGGDCCECTC+ XXX FAC+DP AACV+DD+VT+ M++ CDT ++GD C+ NNN C YD GDCCECTC ++ CG+ + FACIDP APCVDDD TVDM D+C+ IGNGWCD NN C +DGGDCCECTC DDD C + FAC+DP+APCVDD S+T+ M++ C A +G+G+C ++ N +CAYDGGDCC CTC +DD FACIDP+AACVNDDDIT DM NC + + +G+ +CD+ NNN CGYDGGDCCECTC D Y+ C +F+CIDP APCVNDDDVT DM ENCGYV G GNG CD +NN EECG+DGGDCCSCTC ++ DDDY C E G FDC+D +A CFGE +T G DD DD + +SY FV WE+ LPTV AVEVG KTEV V ATA+D+RPG+S G VGCGE GG GC N+RDG+ S+IESRWSCAT +V DEGPCQIE+TFAEPQNIVDIQVAFW NER+ TLEVH +G L HTHESY TFNTLGV T +TVMLES+ LL DEWIS++EV IFVTP
Sbjct: 29 SGFACIDPDASCVDDDDITIEMAQNCDTSELGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTC-----EDTPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCES---LEDDDWACRNN--FACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCE----NERDEDYR-CMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC--QSAYDDDYSCSSEYGYFDCQDPSASCFGEGTT--GSDDFSFHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVTP 736
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 672 bits (1733), Expect = 4.780e-227 Identity = 343/529 (64.84%), Postives = 394/529 (74.48%), Query Frame = 2
Query: 1118 NNNAECNYDDGDCCECTCIPDDSKEDDYYGCGQNNGFACIDPDAPCVDDDDITVDMGDSCDTTY-IGNGWCDPSNNKAECGFDGGDCCECTCTVDGPQGDDDDRCGQDSGFACIDPSAPCVDDSSITVGMIDICN-TADMGNGFCDDENNNGDCAYDGGDCCECTCDGPEDDS--CMYGFACIDPDAACVNDDDITADMLENCGFVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLRS-YTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAG-FDCKDEAAPCFGEESTINGYDD-DDDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEVHFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEVLIFVTP 2683
NNNA C YD GDCCECTC + + CG+ +GFACIDP+APCVDDD TVDM D+CD IG+GWCD NN C +DGGDCCECTC +G + DDD C FAC+DP+APCVDD S+T+ MI+ C+ + +G+G+C + N +CAYDGGDCC CTC+ P DD CM+ FACIDP+AACV+DDDIT DM ENC + + IGN +CDE NN CGYDGGDCCECTC S Y D C +FACIDP APCV+DDD+T DM ENCGYV G GNG CD +NN EECG+DGGDCCSCTC E+ DDDY C E G FDCKD A CFGEE T G DD DD+ +SY FVPWE+ LPTVDGAVEVG KTEV V +TA+DVRPG SSG GCGE GG GC N+RDG+ SEIESRWSCATK+V DEGPCQIE+TFAEPQ I+DIQVAFWKGNER RTLEVH +G + HTHESYA +TFNTLGV T V+TVMLES+ LL DEWIS+IEVLIFVTP
Sbjct: 3 NNNAACAYDGGDCCECTCEDTPNNK-----CGRWSGFACIDPEAPCVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTC--EGSE-DDDWHCRN---FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMW-FACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC--ESPYDDDYSCSSEYGSFDCKDPNASCFGEEPT--GSDDFSTDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFVTP 515
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 664 bits (1712), Expect = 1.120e-218 Identity = 396/848 (46.70%), Postives = 484/848 (57.08%), Query Frame = 2
Query: 524 GFDGGDCCSCTCEST----QDHTCGENG--YECMDPDAACAGEADILCGSPQD-----IGNGYCDIENNKEDCAYDGGDCCECTCVGEIFSDEFFSYSSCANNFACIDPEAPCVNDDDITVDTPAICDRV-GMGNAICNDYNNNAECGYDGGDCCECTCI--------DRLXXXXXXXXXXFACVDPDAACVNDDDVTIDMIDICDTATLGDSLCDEVNNNAECNYDDGDCCECTCIPDDSKEDDYYGCGQNNGFACIDPDAPCVDDDDITVDMGDSCDTTYIGNGWCDPSNNKAECG---FDGGDCC--------------ECTCTVDGPQGDDDDRCGQDSG-FACIDPSAPCVDDSSITVGMIDICN-TADMGNGFCDDENNNGDCA--------------------------YDGGDCCECTCDGPEDDSCMYGFACIDPDAACVNDDDITADMLENCGFVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLRS-YTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAG-FDCKDEAAPCFGEESTINGYDD-DDDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEV------------------------------------------------------------------HFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEV 2665
G+DGGDCC CTC + D C ++G + C+DPDA+C + DI Q+ +G+G+CD +NN E C YDGGDCCECTCV D+ ++ C N ACIDP+APCV+DDDIT C V G+G+ C++ NNN CGYDGGDCCECTC D FAC+DP+A CVNDDD+T+D+ + CD +GD CD NN C G C +C + + CG+ +GFACIDP+APCVDDD TVDM D+CD IG+GWCD NN CG +G + C +V + + G+ F A ++TV MI+ C+ + +G+G+C + N +CA YD +D SC FACIDP+AACV+DDDIT DM+ENC + L +G+ +CD+ NNN CGYDGGDCCECTC S Y D C++F+CIDP+A CV+DDD+T DM+ENCGYV G GNG CD +NN EECG+DGGDCCSCTC ++ DDDY C E G FDC+D A CFGEEST G DD DDE +SY FVPWE+ LPTVDGAVEVG KTEV V ATA+DVR G SSG VGCGE GG GC N+RDG+ SEIESRWSCATK+V DEGPCQIE+TFAEPQ I+DIQVAFWKGNER RTLEV H +G + HTHESY +TFN LGV T V+TVMLES+ LL DEWIS+IEV
Sbjct: 20 GYDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCDTWGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWA---CRNYNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESCDAVNMGDGYCDISNNIEAC----GACSWLSCTDTPNNK-----CGRWSGFACIDPEAPCVDDDSFTVDMIDNCDWG-IGDGWCDEDNNNELCGDRVIEGWESIVNATAERVVRTTVVRCGVSVKWLDNELKEEIGERREVFKQFLSEAFEESWENVTVDMIENCSWSTGIGDGYCSENLNTPECATAPFVSLETVETRISLHLPLALRQNIYD------------DDWSCTR-FACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC--QSPYDDDYLCSSEYGSFDCQDPNASCFGEEST--GSDDYSTDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 837
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 645 bits (1663), Expect = 7.060e-215 Identity = 337/608 (55.43%), Postives = 406/608 (66.78%), Query Frame = 2
Query: 899 CNDYNNNAECGYDGGDCCECTCIDRLXXXXXXXXXXFACVDPDAACVNDDDVTIDMIDIC-DTATLGDSLCDEVNNNAECNYDDGDCCECTC-IPDDSKEDDYYGCGQNNGFACIDPDAPCVDDDDITVDMGDSCDTTYIGN------GWCDPSNNKAECGFDGGDCCECTCTVDGPQGDDDDRCGQDSGFACIDPSAPCVDDSSITVGMIDICNTADMGNGFCDDENNNGDCAYDGGDCCECTCDGPEDDSCMYG--------FACIDPDAACVNDDDITADMLENCG-FVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLRSYTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAGFDCKDEAAPCFGEESTINGYDDDDDDEALSYGFVPWEQDGDLPTVD-GAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEVHFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEVL 2668
C+ +NNNAEC YDGGDCC CTC + F CVDP A CV+DDD+ + + C D +GD CD+ NN EC+YD GDCC CTC +PDD DD CG++ FACIDPDAPCV+DDD T + + T GN G CD NN ECG+DGGDCC CTC DD CG GFACIDPSA C DD +TV ++ C +G+G CD +NN +C YDGGDCC CTC P+DDS G FACIDPDA CVNDDDIT DM++ CG + G+ +CD+DNNN ECGYD GDCC CTCV +Y + + C+DP A CV+DD + + ++CG G NG CD DNN EEC +DGGDCC CTC + D C +GFDC+D APCF EE T+ + +DDD ++SY F+ + DL TV AVEVG KT+V+V ATAYD RPG+SSG VGCGEAGGNGC P N+RDG+S+E ESRWSCA+KIV GPCQIEY F EPQ+I DI+VAFW G+ER+RTLEV+FDGTLH THESYAGSTFN+LGV TG+ TVMLES+DLL +EWIS+IEV+
Sbjct: 42 CDTHNNNAECEYDGGDCCSCTCQNDTYDCGVSG---FDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCL------DDFYECGI-RGFACIDPSAECADDDDVTVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCVDGTYECGIVGFD------CVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSC--TSGFDCQDPTAPCFDEEPTLP--EKEDDDGSMSYDFL---DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEVV 626
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 588 bits (1516), Expect = 3.250e-193 Identity = 322/592 (54.39%), Postives = 374/592 (63.18%), Query Frame = 2
Query: 1091 LGDSLCDEVNNNAECNYDDGDCCECTCIPDDSKEDDYYGCGQNNGFACIDPDAPCVDDDDITVDMGDSCDTTYIGNGWCDPSNNKAECGFDGGDCCECTCTVDGPQGDDDDRCGQD-SGFACIDPSAPCVDDSSITVGMIDICN-TADMGNGFCDDENNNGDCAYDGGDCCECTCDGP--EDD-------------------SCMYGFACIDPDAACVNDDDITA--------------------------------DMLENCGFVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLRSYTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDN--NTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAG-FDCKDEAAPCFGEESTINGYDD---DDDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEVHFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEVLIFVTP 2683
GD C NNNAEC YD GDCCECTC +D+++ GFACIDPDAPCVDDDDIT+++ +C T+ +GNG+CD NN CG+D GDCCECTC P DDD C D SGFACIDP+APCVDD +T+ M++ C +G+G+CDD NNN C YDGGDCCECTC P DD +C GFACIDP+AACVNDDDIT DM+ENC + G+G+ +C++ NNN C YDGGDCC CTC D + C FACIDP+A CVNDDD+T DM+ NC Y GNG G+DGGDCCSCTC DDDY C E DCKD A CFGE +T G DD DD + SY FV WE+ LPTV AVEVG KTEV V ATA+DVRP +SS VGCG+ GG GC N+RDG+ S+IESRWSCAT +V DEG CQIE++FAEPQN+VDIQVAFWKGNER RTL VH +G L HTHESYA STFNTLGV T +TVMLES+ LL DEWIS++EVLIFVTP
Sbjct: 29 FGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTSDLGNGYCDEDNNNEICGYDFGDCCECTCVS--PWDDDDWYCSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQ----NDFDDDW-ACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTT--GSDDFTFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEVLIFVTP 611
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 555 bits (1429), Expect = 3.800e-182 Identity = 292/475 (61.47%), Postives = 338/475 (71.16%), Query Frame = 2
Query: 1295 CDTTYIGNGWCDPSNNKAECGFDGGDCCECTCTVDGPQGDDDDR-CGQD-SGFACIDPSAPCVDDSSITVGMIDICNTADMGNGFCDDENNNGDCAYDGGDCCECTCDGPEDD--------SCMYGFACIDPDAACVNDDDITADMLENCGFVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLRSYTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAG-FDCKDEAAPCFGEESTINGYDD-DDDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEVHFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEVLIFVTP 2683
C G+G+C P NN AECG+DGGDCCECTC PQG D C ++ SGFAC+DP APC + +TV C+ D+G+G+CD NNN C YDGGDCCECTC+ P DD +C GFACIDP A CVNDDDIT D+ E+C V G+G+ +CD DNNNA C YDGGDCCECTC + + G FACIDP APCV+DD VT DM +NC Y+ GNG CD +NN E C +DGGDCC CTC E+ +DDY C E G F+CKD A CFGEE+T G DD DD+ +SY FVPWE+ LPTVDGAVEVG KTEV V +TA+DVRPG GCGE GG GC N+RDG+ SEIESRWSCATK+V DEGPCQIE+TFAEPQ IVDIQVAFWKGNER RTLEV+ +G + HTHESYA +TFNTLGV T V+TVMLES+ LL DEWIS+IEVLIFVTP
Sbjct: 31 CWDALYGDGYCTPPNNNAECGYDGGDCCECTCQ--NPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDAV-GMGDGYCDMDNNNAACAYDGGDCCECTCEPNN------KCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTC--ESAWNDDYTCSSEHGTFNCKDPNASCFGEETT--GSDDFSTDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGDD----GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFVTP 488
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 487 bits (1254), Expect = 3.100e-155 Identity = 267/474 (56.33%), Postives = 311/474 (65.61%), Query Frame = 2
Query: 1412 DDDDRCGQDSGFACIDPSAPCVDDSSITVGMIDICN-TADMGNGFCDDENNNGDC---AYDGGDCCECTCDGPEDDSCMYGFACIDPDAACVNDDDITADMLENCGFVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLRS-YTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAG-FDCKDEAAPCFGEESTINGYDD-DDDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEV-------------------------------------------------HFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEV 2665
DDD C FAC+DP+APCVDD S+TV MI+ C+ + +G+G+C + N +C YD +D SC FACIDP+AACV+DDDIT DM ENC + L +G+ +CDE NNN CGYDGGDCCECTC S Y D C++F+CIDP+A CV+DDD+T DM+ENCGYV G GNG CD +NN EECG+DGGDCCSCTC ++ DDDY C E G FDC+D A CFGEEST G DD DDE +SY FVPWE+ LPTVDGAVEVG KTEV V ATA+DVR G SSG VGCGE GG GC N+RDG+ SEIESRWSCATK+V DEGPCQIE+TFAEPQ I+DIQVAFWKGNER RTLEV H +G + HTHESYA +TFN LGV T V+TVMLES+ LL DEWIS+IEV
Sbjct: 5 DDDWHCRN---FACVDPNAPCVDDDSVTVDMIENCSWSTGIGDGYCSENLNTPECEVGVYD------------DDWSCTR-FACIDPEAACVDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC--QSPYDDDYLCSSEYGSFDCQDPNASCFGEEST--GSDDYSTDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 458
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 417 bits (1073), Expect = 1.500e-132 Identity = 208/306 (67.97%), Postives = 238/306 (77.78%), Query Frame = 2
Query: 1775 GYDGGDCCECTCVLRSYTTSDIRYQGCQDFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAGFDCKDEAAPCFGEESTINGYDDD---DDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEVHFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEVLIFVTP 2683
GYDGGDCCECTC D Y+ C F+CIDP+APCVNDDD+T DM++NCGYV G G+G CD +NN E CG+DGGDCCSCTC E+V DDDY CG +A FDCKD +A CFGEE+ + DD D Y FVPWEQ LPTVD AVEVG KTEV+V ATA+DVR G SSG+VGCGEAGGNGC N+RDG+S+EIESRWSCA K++ DEGPCQIE++FAEPQNIVDIQVAFWKGNER+RTLEV+ +G L HTHESYA STFNTLGV TVMLES+ LL +EWIS+IEVLIFVTP
Sbjct: 9 GYDGGDCCECTCE-----GDDDDYK-CMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTC--ESVWDDDYTCGEDAFFDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFVTP 306
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 363 bits (933), Expect = 8.810e-113 Identity = 187/279 (67.03%), Postives = 212/279 (75.99%), Query Frame = 2
Query: 1859 DFACIDPDAPCVNDDDVTADMYENCGYVGGFGNGSCDPDNNTEECGFDGGDCCSCTCGVENVLDDDYGCGPEAG-FDCKDEAAPCFGEESTINGYDD---DDDDEALSYGFVPWEQDGDLPTVDGAVEVGDKTEVAVVATAYDVRPGASSGQVGCGEAGGNGCEPLNSRDGVSSEIESRWSCATKIVADEGPCQIEYTFAEPQNIVDIQVAFWKGNERIRTLEVHFDGTLHHTHESYAGSTFNTLGVEGTGVTTVMLESIDLLPDEWISIIEVLIFVTP 2683
+FACIDP APCV+DDDVT DM ENCGYV G GNG CD +NN EECG+DGGDCCSCTC ++ DDDY C E G FDC+D A CFGE +T G DD DD + +SY F+ WE+ LPTV AVEVG KTEV V ATA+DVRPG+S VGCGE GG GC N+RDG+ S+IESRWSCAT +V DEGPCQIE+TFAEPQNIVDIQVAFW NER+ TLEVH +G L HTHESY TFNTLGV T +TVMLES+ LL DEWIS++EV IFVTP
Sbjct: 2 EFACIDPSAPCVDDDDVTVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC--QSAYDDDYSCSSEYGYFDCQDPTASCFGEGTT--GSDDFSFHDDYQPMSYEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVTP 275
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 340 bits (873), Expect = 9.260e-104 Identity = 169/306 (55.23%), Postives = 206/306 (67.32%), Query Frame = 2
Query: 929 GYDGGDCCECTCIDRLXXXXXXXXXX--FACVDPDAACVNDDDVTIDMIDICDTATLGDSLCDEVNNNAECNYDDGDCCECTCIPDDSKEDDYYGCGQNNGFACIDPDAPCVDDDDITVDMGDSCDTT-YIGNGWCDPSNNKAECGFDGGDCCECTCT-VDGPQGDDD---DRCGQDSGFACIDPSAPCVDDSSITVGMIDICNTADMGNGFCDDENNNGDCAYDGGDCCECTCDGPEDDSC--MYGFACIDPDAACVNDDDITADMLENCGFVLGIGNSFCDEDNNNAECGYDGGDCCECTCVLR 1819
G+DGGDCCECTC+ FACVDP A CV+DDD+TI+ C GD CD+ NNN C YD GDCCECTC+ + DD Y C N+ ACIDP APCVDDDD+TVDM ++C +GNGWCD NN CG+DGGDCCECTC +D G DD + CG +GFACIDP+APCV+D IT+ +++ C++ +GNGFCD +NNN CAYDGGDCCECTC+ + C GFACIDP+A CV++D T DM+E+C + GN +CDEDNN EC YDGGDCCECTC +R
Sbjct: 5 GFDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNCFPREFGDGWCDQENNNEICGYDGGDCCECTCV---NAWDDDYSCAANS--ACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCG--NGFACIDPNAPCVNDDDITLDIVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTCEVR 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1355.2872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1355.2872.1 >prot_H-canaliculatus_F_contig1355.2872.1 ID=prot_H-canaliculatus_F_contig1355.2872.1|Name=mRNA_H-canaliculatus_F_contig1355.2872.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=869bp MIQQYRQDGHGNTYFFVVRSRVHQKASGKRKHKVGNKKLETRGQDVFCTLback to top mRNA from alignment at H-canaliculatus_F_contig1355:285..20370+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1355.2872.1 ID=mRNA_H-canaliculatus_F_contig1355.2872.1|Name=mRNA_H-canaliculatus_F_contig1355.2872.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=20086bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1355:285..20370+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1355:285..20370+ >mRNA_H-canaliculatus_F_contig1355.2872.1 ID=mRNA_H-canaliculatus_F_contig1355.2872.1|Name=mRNA_H-canaliculatus_F_contig1355.2872.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5214bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1355:285..20370+ (Hapterophycus canaliculatus Oshoro5f female)back to top |