mRNA_H-canaliculatus_F_contig13536.2865.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13536.2865.1
Unique NamemRNA_H-canaliculatus_F_contig13536.2865.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: D8LQV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV3_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.150e-79
Identity = 139/171 (81.29%), Postives = 143/171 (83.63%), Query Frame = 1 
Query:    1 QERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLA--------------RAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHV 471
            ++RIAMLVEAGVDVLVIDERNGDTTEQI+Q+RHIKAKYPKVDVIGGNVVTR QALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRA                          RAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYH 
Sbjct:  260 RDRIAMLVEAGVDVLVIDERNGDTTEQIDQVRHIKAKYPKVDVIGGNVVTRSQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAXXXXXXXXXXXXXXXXXXXXXXXXXXRAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHA 430
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A835ZPD2_9STRA (IMP dehydrogenase/GMP reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPD2_9STRA)

HSP 1 Score: 211 bits (537), Expect = 4.040e-63
Identity = 115/169 (68.05%), Postives = 131/169 (77.51%), Query Frame = 1 
Query:    7 RIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQV-------------RAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVS 474
            RI  L  AGVDVLVIDERNG T+ Q+EQI+++K K+P+V+V+ GNVVT  QA  LLDAG DA+RVGMGAGSVSTTQQV             RAVGRAQISAVY+VSKLA   GVPVIADGGIMNTGC  KAL +GASV+MMG +LA TEEAPG YFYQ G+RLKHY  +
Sbjct:  264 RIDALAAAGVDVLVIDERNGSTSAQVEQIKYVKRKHPEVEVVAGNVVTCAQARVLLDAGADALRVGMGAGSVSTTQQVKTILVTVCALLFVRAVGRAQISAVYYVSKLAAERGVPVIADGGIMNTGCATKALSLGASVVMMGGMLAATEEAPGAYFYQDGVRLKHYQAT 432
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A835ZCF6_9STRA (IMP dehydrogenase/GMP reductase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF6_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.370e-62
Identity = 112/169 (66.27%), Postives = 130/169 (76.92%), Query Frame = 1 
Query:    7 RIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQV-------------RAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVS 474
            RI  L  AGVDV VIDERNG T  Q++Q+R+IK K+P VDV+ GNVVT  QA  LL+AG DA+RVGMGAGSVSTTQQV             RAVGRAQISAVY+VS+LA   G+PVIADGGIMNTGC  KAL +GASV+MMG +LA TEEAPG+YFYQ G+R+KHYH +
Sbjct:  265 RIDALAAAGVDVFVIDERNGSTDAQVKQLRYIKEKHPGVDVVAGNVVTCAQARVLLEAGADALRVGMGAGSVSTTQQVFMIESAVPCIIHVRAVGRAQISAVYYVSRLAAEQGIPVIADGGIMNTGCATKALSLGASVVMMGGMLAATEEAPGDYFYQDGVRMKHYHAT 433
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: K3WPY9_GLOUD (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPY9_GLOUD)

HSP 1 Score: 204 bits (519), Expect = 9.300e-61
Identity = 102/159 (64.15%), Postives = 130/159 (81.76%), Query Frame = 1 
Query:    4 ERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVSGT 480
            ER+  LV AG DV+V+D+R GD+ EQ+E +++IKA +P V+V+GGN+VT  Q   LL+AGVD+VRVGMG GSVST+Q V+AVGRAQ+SA+Y+ +  ARAYGVPVIADGGI N+GC IKAL +GAS +MMGS LAGT EAPG+YF+Q G RLK Y+ SG+
Sbjct:  246 ERVNALVSAGADVIVLDDRQGDSQEQVELVKYIKATHPSVEVVGGNIVTMKQLHHLLEAGVDSVRVGMGVGSVSTSQMVKAVGRAQLSAIYNTALAARAYGVPVIADGGISNSGCAIKALALGASCVMMGSSLAGTSEAPGDYFFQDGQRLKRYYGSGS 404
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A8K1CU65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU65_PYTOL)

HSP 1 Score: 204 bits (519), Expect = 1.040e-60
Identity = 105/160 (65.62%), Postives = 128/160 (80.00%), Query Frame = 1 
Query:    1 QERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVSGT 480
            Q RI  LVEAG DV+V+D R GD+ EQI+ ++ IK  +P VDVIGGNVVT+ Q   LLDAGVDAVRVGMG  SVST+Q ++AVGRAQ+SA+Y+ + +A+ YG+PVIADGGI N+G  IKAL +GAS  MMGS LAGT EAPGEYF+Q GMRLKHY+ SG+
Sbjct:  250 QARITALVEAGADVIVLDARQGDSIEQIKLVKFIKTTHPSVDVIGGNVVTQQQLRHLLDAGVDAVRVGMGVASVSTSQMIKAVGRAQLSAIYNTALVAKEYGIPVIADGGISNSGSAIKALSLGASCCMMGSSLAGTSEAPGEYFFQDGMRLKHYYGSGS 409
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A7R9WK95_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WK95_9STRA)

HSP 1 Score: 196 bits (497), Expect = 5.420e-60
Identity = 103/160 (64.38%), Postives = 124/160 (77.50%), Query Frame = 1 
Query:    1 QERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVSGT 480
            ++R A LVEAGVDV+V+D   GD+  QIE I H+K+ +P +DVIGGNVVT  QA  L+ AG D +RVGMG GS+ TTQ+V AVGRAQ SAVYHVSK AR +GVPV+ADGGI +TG   KAL  GAS +MMGS+LAGT+EAPGEYFYQ G+RLK Y   G+
Sbjct:    3 RDRAAALVEAGVDVIVVDSSQGDSKYQIETIAHLKSAHPSLDVIGGNVVTPSQAAHLIQAGADGLRVGMGIGSICTTQEVCAVGRAQASAVYHVSKYARKHGVPVVADGGIKSTGHITKALCFGASAVMMGSMLAGTDEAPGEYFYQDGVRLKRYRGMGS 162
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A7S2RJY9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJY9_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.940e-59
Identity = 102/155 (65.81%), Postives = 126/155 (81.29%), Query Frame = 1 
Query:    1 QERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHY 465
            QER   LV AGVD++V+D R+GDT EQ++ I+ +KA +P ++V+GGNV T  QA  LL+AGVD +RVGMG GS+ST+QQV+A GRAQ+SA+YH + LAR Y VPVIADGGI NTGC IKAL MGAS +MMGSLLAG EE+PGEY++Q GMRLK Y
Sbjct:  294 QERAQALVAAGVDIIVVDSRHGDTQEQVDMIQWLKATFPTLEVVGGNVATFSQARNLLEAGVDGLRVGMGVGSISTSQQVKAGGRAQLSAIYHSALLARKYDVPVIADGGIANTGCAIKALTMGASCVMMGSLLAGVEESPGEYYFQDGMRLKRY 448
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A7S2I8F9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8F9_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.460e-59
Identity = 101/160 (63.12%), Postives = 128/160 (80.00%), Query Frame = 1 
Query:    1 QERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVSGT 480
            ++R A+LVEAGVDV+V+D   GD+  Q+E I+HIK  +P+VDV+GGNVVT  QA+ L+ AGVD +RVGMG GS+ TTQ+V AVGRAQ SAV+HV+K AR +G+P+IADGGI +TG   KAL  GAS +MMGS+LAGT+EAPGEYFYQ G+RLK Y   G+
Sbjct:  116 RDRAALLVEAGVDVIVVDSSQGDSLYQLEIIQHIKENFPQVDVVGGNVVTPSQAMHLIQAGVDGLRVGMGIGSICTTQEVCAVGRAQASAVFHVAKFARKHGIPIIADGGIKSTGHITKALCCGASCVMMGSMLAGTDEAPGEYFYQDGVRLKRYRGMGS 275
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BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A5D6XM84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM84_9STRA)

HSP 1 Score: 200 bits (508), Expect = 5.020e-59
Identity = 101/159 (63.52%), Postives = 129/159 (81.13%), Query Frame = 1 
Query:    4 ERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVSGT 480
            ERI  LVEAG DV+V+D R GDT EQ++ I++IK  +P V+V+GGNVVT  Q  +LLDAGVD+VRVGMGA SVST+Q V+AVGRAQ+SA+Y+ + +AR YGVPVIADGG+ N+GC +KAL +GAS +MMGS LAGT EAPG+YF++ G RLK Y+  G+
Sbjct:  259 ERIVALVEAGADVIVLDARQGDTDEQLKLIQYIKTTHPSVEVMGGNVVTAKQLRSLLDAGVDSVRVGMGAASVSTSQMVKAVGRAQLSAIYNTAAIAREYGVPVIADGGVSNSGCAMKALALGASSVMMGSSLAGTSEAPGDYFFEDGQRLKRYNGVGS 417
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Match: A0A7S4J1P0_9STRA (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1P0_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.510e-58
Identity = 105/160 (65.62%), Postives = 126/160 (78.75%), Query Frame = 1 
Query:    1 QERIAMLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQALALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPVIADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHYHVSGT 480
            ++R A LVEAGVDV+V+D   GD+  QI+ I+H+K  +P VDVIGGNVVT  QAL L+ AGVD +RVGMG GS+ TTQ+V AVGRAQ SAVYHVSK AR +GVPV+ADGGI +TG   KAL  GAS +MMGS+LAGT+EAPGEYFYQ G+RLK Y   G+
Sbjct:  272 RDRAAALVEAGVDVIVVDSSQGDSKYQIDIIQHLKEAHPSVDVIGGNVVTPSQALHLIQAGVDGLRVGMGIGSICTTQEVCAVGRAQASAVYHVSKFARRHGVPVVADGGIKSTGHITKALCFGASAVMMGSMLAGTDEAPGEYFYQDGVRLKRYRGMGS 431
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13536.2865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV3_ECTSI1.150e-7981.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPD2_9STRA4.040e-6368.05IMP dehydrogenase/GMP reductase n=1 Tax=Tribonema ... [more]
A0A835ZCF6_9STRA2.370e-6266.27IMP dehydrogenase/GMP reductase (Fragment) n=1 Tax... [more]
K3WPY9_GLOUD9.300e-6164.15Inosine-5'-monophosphate dehydrogenase n=1 Tax=Glo... [more]
A0A8K1CU65_PYTOL1.040e-6065.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9WK95_9STRA5.420e-6064.38Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A7S2RJY9_9STRA1.940e-5965.81Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2I8F9_9STRA2.460e-5963.13Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A5D6XM84_9STRA5.020e-5963.52Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S4J1P0_9STRA2.510e-5865.63Inosine-5'-monophosphate dehydrogenase n=1 Tax=Odo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13536contigH-canaliculatus_F_contig13536:750..2836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.0
Seed ortholog evalue7.3e-64
Seed eggNOG ortholog2880.D8LQV3
Preferred nameIMPDH2
KEGG rclassRC00143,RC02207
KEGG koko:K00088
KEGG ReactionR01130,R08240
KEGG Pathwayko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110
KEGG ModuleM00050
GOsGO:0000166,GO:0000323,GO:0000785,GO:0000902,GO:0000904,GO:0001654,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003723,GO:0003729,GO:0003824,GO:0003938,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0007154,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007623,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009267,GO:0009409,GO:0009605,GO:0009607,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0009991,GO:0010033,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0022008,GO:0022607,GO:0030030,GO:0030141,GO:0030154,GO:0030182,GO:0030447,GO:0031175,GO:0031347,GO:0031349,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032940,GO:0032943,GO:0032989,GO:0032990,GO:0033554,GO:0034097,GO:0034404,GO:0034641,GO:0034654,GO:0034774,GO:0035578,GO:0035690,GO:0035821,GO:0036094,GO:0036170,GO:0036180,GO:0036230,GO:0040007,GO:0040011,GO:0042119,GO:0042221,GO:0042278,GO:0042330,GO:0042451,GO:0042455,GO:0042493,GO:0042582,GO:0042594,GO:0043010,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043473,GO:0043933,GO:0044003,GO:0044085,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044416,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0046903,GO:0048066,GO:0048468,GO:0048511,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052251,GO:0052255,GO:0052509,GO:0052510,GO:0055086,GO:0055114,GO:0060041,GO:0060205,GO:0061564,GO:0065003,GO:0065007,GO:0070013,GO:0070661,GO:0070670,GO:0070887,GO:0071310,GO:0071345,GO:0071353,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0075136,GO:0080134,GO:0090407,GO:0097159,GO:0097485,GO:0097708,GO:0099503,GO:0101002,GO:0120036,GO:0120039,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1904813
EggNOG free text desc.IMP dehydrogenase activity
EggNOG OGsCOG0516@1,KOG2550@2759
EC1.1.1.205
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size480
Cds size465
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13536.2865.1prot_H-canaliculatus_F_contig13536.2865.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13536 765..2836 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929097.3123195-UTR-H-canaliculatus_F_contig13536:749..7641622929097.3123195-UTR-H-canaliculatus_F_contig13536:749..764Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13536 750..764 +
1696845677.5466282-UTR-H-canaliculatus_F_contig13536:749..7641696845677.5466282-UTR-H-canaliculatus_F_contig13536:749..764Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13536 750..764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929097.3308034-CDS-H-canaliculatus_F_contig13536:764..8391622929097.3308034-CDS-H-canaliculatus_F_contig13536:764..839Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13536 765..839 +
1696845677.5593095-CDS-H-canaliculatus_F_contig13536:764..8391696845677.5593095-CDS-H-canaliculatus_F_contig13536:764..839Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13536 765..839 +
1622929097.3670704-CDS-H-canaliculatus_F_contig13536:1882..20291622929097.3670704-CDS-H-canaliculatus_F_contig13536:1882..2029Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13536 1883..2029 +
1696845677.5678697-CDS-H-canaliculatus_F_contig13536:1882..20291696845677.5678697-CDS-H-canaliculatus_F_contig13536:1882..2029Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13536 1883..2029 +
1622929097.3852715-CDS-H-canaliculatus_F_contig13536:2593..28361622929097.3852715-CDS-H-canaliculatus_F_contig13536:2593..2836Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13536 2594..2836 +
1696845677.5772457-CDS-H-canaliculatus_F_contig13536:2593..28361696845677.5772457-CDS-H-canaliculatus_F_contig13536:2593..2836Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13536 2594..2836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13536.2865.1

>prot_H-canaliculatus_F_contig13536.2865.1 ID=prot_H-canaliculatus_F_contig13536.2865.1|Name=mRNA_H-canaliculatus_F_contig13536.2865.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=155bp
MLVEAGVDVLVIDERNGDTTEQIEQIRHIKAKYPKVDVIGGNVVTRGQAL
ALLDAGVDAVRVGMGAGSVSTTQQVRAVGRAQISAVYHVSKLARAYGVPV
IADGGIMNTGCGIKALGMGASVLMMGSLLAGTEEAPGEYFYQQGMRLKHY
HVSGT
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mRNA from alignment at H-canaliculatus_F_contig13536:750..2836+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13536.2865.1 ID=mRNA_H-canaliculatus_F_contig13536.2865.1|Name=mRNA_H-canaliculatus_F_contig13536.2865.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2087bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13536:750..2836+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGAACGCATCGCTATGCTGGTGGAGGCCGGCGTGGATGTCCTGGTTAT
CGACGAGAGGAACGGAGACACAACCGAGCAGATCGAACAGGTTCGTCCAC
AAGCAGTCCACAAGCAGGGAAACAAAACAAAATCGAAAGAAAGGCAGCAG
ATGGGACGGGGTGTCGAGACGAAAGGGGAGGGAAAGAGTGGGCAGCAGGG
CGCAAGCAGCCTCGTCGGCTAGAGGTGTGGAGAAGGAGCCGGTCCAGAGG
TTTGTCGGCGTAAGAGGCGGGGGGGAGGGGGGTGGGGGGGGGCGGAGGAG
GGGAGTTGCACATCTTGCGTACGTACGGGCTTGTCAAGAAGACGGGGAAA
ACGGAGGAGAGAACGCCCGAGAGAGCATGCGATGCGTGACACAGCAGTGG
TAGTACCGATGGCGGACGTACCACCTTGTTCATGGGGACGGGACGGGGTG
CGGATTGTCGGCGACAAACACACCGAGACAGGCAGACAGACAGACAGAGA
GAGAGAGAGGTTGCGGCCTTTTTTTATGTGATGGCCGGGGTTTGCGGTGT
ACGATGCTTGCTCGACGCGGGGCAAGCCTGACGGGGGGCGCAGTGGAATC
GTGGAACGGGGGTCGTGGCAGCGGGCGAACTTGAGCGAGGATGCTGCCAA
TTCTTCCAGGAGGGAGGGAGGGTGGTCAGCGGTCAGGGACGAGGAGGAAA
GGGCCTGTGTGTGTCTGTGTGTGTGTCTGTGTGTGTCTGTGTGCCTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGCGTGGCTGC
GTGTGCGTACGTGTGCGTGTGTGTGTGCTGTCGCCTGGGAGAGGACGGAG
TTGTACAAGAGTGCAAGGGATGGATCAGACGCGGGAGCGGAGATGGAAGG
CGCCGGGAGCGAAGCGTGCCAGGAGGAAGCAGGCTTGGACCACACCATCT
CAAATACATGTATACGAAGTTTTTTTTTTCTCGTTCCTTGAGTGTTTTCC
GCTCGCAGTACAGTGCGTACGTGCTCGTGTTTGTGTTGCGCATCCTCTCC
TGTCTCAACGGTGACCCCCTCCCCCCCCCTCCCCTCCCGTTCCCCGCCGC
CCGGCGTACGGCAAACGCACAAACGCTTTCCAGATCCGCCACATCAAGGC
CAAGTACCCGAAGGTGGACGTTATCGGAGGAAACGTGGTTACCCGCGGCC
AGGCGTTGGCCCTGCTGGACGCCGGCGTCGACGCCGTGCGGGTGGGCATG
GGCGCTGGTTCGGTCTCGACGACGCAGCAGGTGCGGGCGCGTGCTCTTGC
TGCAAGAGGGTTGTGGTGGACGGGCGCGCGGCAGCAAGAGTGGTCGTGGG
AATGAATGAATTAGCTCTGCATCTTCTTCATCCGGGTTGCCAGAAGTCGG
CGCCAGAATATGTTGCTTTTTGTTGTCTACAAGCATGTGCTCGATTCTTG
TGTGTACCTGATTCTTTTTGCCCATTGTCCCTCAGGTGTGACACGTCGAC
TCGAAGAATCTTCTGATTCGGTCGTTCGTTGGTTTGCCCGGGCGGGTTCG
TTGTGACTGCGTTCGTCCTCGTCGTGCGACGATCGCGACGATCATGGCGG
ATGGCAGTCGATTCGTCGTCGGTCTGCCTCCTTGCCACCGGACATTATCA
TTGTCTACTCACGGAGAATCCTCCCCCCCCCCTATCCCCAACCGCCACCA
TCCGAAACGAAAACCGAAGCCTCACTGCATGGAGCTCCACTCAAGTAGAA
TCTCCCGCAATTCCCGTCTCACGGGTCGTGCCTGCAGTACGATATCAACG
ACTCTTCTTCATTGAAAAAAAACGAAAACCGGGGTAAAAAATAGGTGAGA
GCCGTTGGGCGAGCGCAAATCTCGGCGGTCTACCACGTTAGCAAGCTCGC
GCGTGCCTACGGAGTCCCCGTAATCGCGGACGGTGGGATCATGAACACGG
GATGCGGGATCAAGGCGCTGGGGATGGGCGCTAGCGTGCTGATGATGGGC
TCCCTCCTGGCGGGGACGGAGGAAGCCCCTGGGGAGTACTTCTACCAGCA
GGGCATGCGGCTCAAGCACTACCACGTGAGTGGGACG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13536:750..2836+

>mRNA_H-canaliculatus_F_contig13536.2865.1 ID=mRNA_H-canaliculatus_F_contig13536.2865.1|Name=mRNA_H-canaliculatus_F_contig13536.2865.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=930bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13536:750..2836+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCTGGTGGAGGCCGGCGTGGATGTCCTGGTTATCGACGAGAGGAACGG
AGACACAACCGAGCAGATCGAACAGATGCTGGTGGAGGCCGGCGTGGATG
TCCTGGTTATCGACGAGAGGAACGGAGACACAACCGAGCAGATCGAACAG
ATCCGCCACATCAAGGCCAAGTACCCGAAGGTGGACGTTATCGGAGGAAA
CGTGGTTACCCGCGGCCAGGCGTTGGCCCTGCTGGACGCCGGCGTCGACG
CCGTGCGGGTGGGCATGGGCGCTGGTTCGGTCTCGACGACGCAGCAGATC
CGCCACATCAAGGCCAAGTACCCGAAGGTGGACGTTATCGGAGGAAACGT
GGTTACCCGCGGCCAGGCGTTGGCCCTGCTGGACGCCGGCGTCGACGCCG
TGCGGGTGGGCATGGGCGCTGGTTCGGTCTCGACGACGCAGCAGGTGAGA
GCCGTTGGGCGAGCGCAAATCTCGGCGGTCTACCACGTTAGCAAGCTCGC
GCGTGCCTACGGAGTCCCCGTAATCGCGGACGGTGGGATCATGAACACGG
GATGCGGGATCAAGGCGCTGGGGATGGGCGCTAGCGTGCTGATGATGGGC
TCCCTCCTGGCGGGGACGGAGGAAGCCCCTGGGGAGTACTTCTACCAGCA
GGGCATGCGGCTCAAGCACTACCACGTGAGTGGGACGGTGAGAGCCGTTG
GGCGAGCGCAAATCTCGGCGGTCTACCACGTTAGCAAGCTCGCGCGTGCC
TACGGAGTCCCCGTAATCGCGGACGGTGGGATCATGAACACGGGATGCGG
GATCAAGGCGCTGGGGATGGGCGCTAGCGTGCTGATGATGGGCTCCCTCC
TGGCGGGGACGGAGGAAGCCCCTGGGGAGTACTTCTACCAGCAGGGCATG
CGGCTCAAGCACTACCACGTGAGTGGGACG
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