mRNA_H-canaliculatus_F_contig13463.2815.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13463.2815.1
Unique NamemRNA_H-canaliculatus_F_contig13463.2815.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 4.250e-135
Identity = 228/258 (88.37%), Postives = 234/258 (90.70%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQ-----------------------MMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            +VFFMTAGGVSKAS+GINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLG+RLDFFRL+SFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQ                       MMLAGMGLLNTMPMLATL VEKGLLVALGEV+QVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFE+
Sbjct: 1577 KVFFMTAGGVSKASRGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRRLSTSAAPGALSMKYMHQLALMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEL 1834          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA)

HSP 1 Score: 385 bits (990), Expect = 3.370e-120
Identity = 197/235 (83.83%), Postives = 216/235 (91.91%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            +VFFMT GG+SKASKGINLSEDIFAGYN TIRGGQ+ F EY QVGKGRDVGMQQIYKFEAKL+QGAAEQ+LSRDVNRLG RLDFFRL+SFYFGGLGYY+GNFIT++T+ FVVYF+LAL+VF  E IG+RK+ PEG LQM+LAGMG+LNT+PMLATLMVEKGL  AL  V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHS FDDLYRFFA SHFYLGFE+
Sbjct: 1287 KVFFMTRGGMSKASKGINLSEDIFAGYNNTIRGGQVVFCEYAQVGKGRDVGMQQIYKFEAKLAQGAAEQSLSRDVNRLGARLDFFRLVSFYFGGLGYYIGNFITIVTIVFVVYFMLALSVFQAEKIGERKITPEGTLQMLLAGMGVLNTLPMLATLMVEKGLRAALITVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFDDLYRFFATSHFYLGFEL 1521          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A7S0GHQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHQ8_9STRA)

HSP 1 Score: 310 bits (795), Expect = 3.090e-101
Identity = 158/235 (67.23%), Postives = 194/235 (82.55%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            ++FFMT GGVSKASKGINLSEDIFAGY+  IRGGQ+ FKEY+QVGKGRDVGM QIYKFEAKLSQGAAEQ+LSRDV R+  RLDF RL +FYFGG+G+Y  N +TVLTV  V Y V  LA++D E IGD+K+ P G LQM+L G+GLL T+P++ATL VE+G L A+ ++  VF++GGP++FMFHIQT+AHY  QT+L GGA+YR TGRGFVT H+  D+ +RFFA+SH YLGFE+
Sbjct:   79 KLFFMTRGGVSKASKGINLSEDIFAGYSNVIRGGQVGFKEYLQVGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMSHRLDFCRLFTFYFGGIGHYFSNVLTVLTVYVVTYLVALLAIYDIEVIGDQKVTPVGTLQMLLGGLGLLQTIPLIATLGVERGWLAAVQDIFSVFVTGGPLHFMFHIQTKAHYMAQTILVGGAKYRPTGRGFVTQHTPMDEQFRFFASSHLYLGFEL 313          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA)

HSP 1 Score: 326 bits (835), Expect = 2.900e-99
Identity = 166/235 (70.64%), Postives = 201/235 (85.53%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            ++FFMT GG+SKASKGINLSEDIFAG+N  +RGG + FKEYVQVGKGRDVGMQQIYKFEAKL+QG AEQ+LSRDV+RL  R+DF RL+S YFGGLG+Y+ +F+TV TV FVVY +  LA+F  E+IGDRK+IPEG +QM L GMG+L T+PM +TL VEKG+  A+G V+QVF SGGP+YFMFHIQT+++YF QTLLAG A+YR TGRGFVT HS FD+ +RFFA+SHFYLGFE+
Sbjct: 1064 KLFFMTRGGISKASKGINLSEDIFAGFNNQLRGGNVEFKEYVQVGKGRDVGMQQIYKFEAKLAQGNAEQSLSRDVHRLAARVDFGRLLSLYFGGLGFYINSFLTVFTVFFVVYLMTYLALFGLEAIGDRKVIPEGVVQMCLGGMGILQTVPMFSTLAVEKGVASAVGTVLQVFFSGGPLYFMFHIQTKSYYFIQTLLAGNAKYRPTGRGFVTRHSSFDENFRFFASSHFYLGFEL 1298          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A7S3LH45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH45_9STRA)

HSP 1 Score: 302 bits (774), Expect = 6.200e-99
Identity = 155/235 (65.96%), Postives = 190/235 (80.85%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            ++FF+T GG+SKASKGINLSEDIFAGYN   RGG + FKEYVQ+GKGRDVGM QIYKFEAKLSQGAAEQ+LSRDV R+  RLDFFRL+SFY+GG+G+Y  N +T+LTV  VVY +  LAVF+ E IGDR + P G +QM+L G+GLL T+P+ ATL VE+G   +L E+I +F++GGP++FMFHIQT+A Y  QT+L GGA YR TGRGFVT H+ FD+ YRFFA SH YLG E+
Sbjct:   60 KLFFITRGGISKASKGINLSEDIFAGYNNVNRGGTVGFKEYVQIGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMCNRLDFFRLLSFYYGGIGHYFSNVLTILTVYVVVYLMTVLAVFNLEKIGDRMITPMGTIQMLLGGLGLLQTIPLFATLGVERGWWASLQEIIVIFVTGGPLHFMFHIQTKATYMAQTILVGGAIYRPTGRGFVTQHAPFDEQYRFFAGSHLYLGVEL 294          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA)

HSP 1 Score: 323 bits (828), Expect = 3.620e-98
Identity = 166/201 (82.59%), Postives = 181/201 (90.05%), Query Frame = 1
Query:  103 QIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            ++ F+EY QVGKGRDVGMQQIYKFEAKL+QGAAEQ+LSRD NRLG RLDFFRL SFYFGGLGYY+GNFITV+T+ FVVYF+LA AVF  E IG+RK+ P G LQMMLAGMG+LNT+PMLATLMVEKGL  AL  V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHS FDDLYRFFA SHFYLGFE+
Sbjct: 1720 KVVFREYAQVGKGRDVGMQQIYKFEAKLAQGAAEQSLSRDTNRLGARLDFFRLWSFYFGGLGYYIGNFITVVTIVFVVYFMLAEAVFQVEKIGERKITPVGTLQMMLAGMGVLNTLPMLATLMVEKGLRAALVVVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSTFDDLYRFFATSHFYLGFEL 1920          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA)

HSP 1 Score: 313 bits (802), Expect = 1.120e-94
Identity = 160/235 (68.09%), Postives = 195/235 (82.98%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            ++FFMT GGVSKASKGINLSEDIFAGYN  +RGG + FKEYVQ GKGRDVG QQIYKFEAKLSQG AEQ+LSRDV R+ +R+DFFRL+S YFGG+G+Y GN +TV TV  V Y +L LA++D E IGDRK+ P G LQM+L GMGL+NT+P+ ATL VE+G   ++ E+ QVF++GGP++FMFHIQT+AHYF QT+L GGA+YRATGRGFVT HS F + +RFFA+SH YLG E+
Sbjct: 1510 KLFFMTRGGVSKASKGINLSEDIFAGYNNLVRGGGVDFKEYVQCGKGRDVGGQQIYKFEAKLSQGNAEQSLSRDVYRVAQRVDFFRLLSTYFGGIGHYCGNVLTVFTVYLVCYLMLGLALYDCEKIGDRKITPSGTLQMLLGGMGLMNTIPLFATLGVERGWWASMMEIFQVFVTGGPLHFMFHIQTKAHYFAQTILVGGAKYRATGRGFVTQHSPFAENFRFFASSHLYLGVEL 1744          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: B8CDT6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDT6_THAPS)

HSP 1 Score: 298 bits (763), Expect = 8.910e-94
Identity = 151/235 (64.26%), Postives = 191/235 (81.28%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            ++FF+T GG+SK+SKGINLSEDIFAGYN  IRGGQ+ FKEY+QVGKGRDVGM QIY+FEAKLSQGA EQ+LSRDV RL  RLDF RL+S+YFGG+G+Y  N +TV+TV  VVY +  LA++D E IGDR + P G +QM+L G+GLL T+P+ +TL VE+G   +  E++QVF +GGP++FMFHIQT+A+Y  QT+L GGA+YR TGRGFVT H+  D+ YRFFA+SH YLG E+
Sbjct:  330 KLFFITRGGISKSSKGINLSEDIFAGYNNAIRGGQVAFKEYIQVGKGRDVGMSQIYQFEAKLSQGAGEQSLSRDVYRLCHRLDFSRLLSYYFGGIGHYFSNVLTVITVYVVVYLMAILALYDLEKIGDRLITPMGTIQMLLGGLGLLQTVPLFSTLGVERGWWESFRELVQVFATGGPLHFMFHIQTKANYMTQTILVGGAKYRPTGRGFVTQHTPMDEQYRFFASSHLYLGVEM 564          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: F0YA81_AURAN (1,3-beta-glucan synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA81_AURAN)

HSP 1 Score: 307 bits (786), Expect = 1.600e-92
Identity = 158/235 (67.23%), Postives = 192/235 (81.70%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            +++F T GGVSKASKGINLSEDIFAGY   IRGG +  KEY QVGKGRDVGMQQIYKFEAKLSQG AEQ LSRDV+R+  RLDF RL+S+YFGG+G+Y+ + +T++T+    Y  L LAV+  ESIG R ++P G++Q++LAG+GLLNT+P+LATL VE+GL  A  +V QVF SGGP+YF+FHIQTRAHYF QT+LAGGA YRATGRGFVT HS FD+ YRFFA SH +LG E+
Sbjct: 1762 KLWFATRGGVSKASKGINLSEDIFAGYTAMIRGGGVTMKEYAQVGKGRDVGMQQIYKFEAKLSQGNAEQCLSRDVSRIASRLDFPRLLSYYFGGIGHYINSALTIITIQVATYLALLLAVYGAESIGHRLVVPLGSVQILLAGLGLLNTLPLLATLAVERGLWAAAKDVAQVFASGGPLYFIFHIQTRAHYFTQTILAGGATYRATGRGFVTRHSTFDEQYRFFAASHLHLGVEL 1996          
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Match: A0A7S3H8Z7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Z7_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.600e-92
Identity = 151/235 (64.26%), Postives = 195/235 (82.98%), Query Frame = 1
Query:    1 QVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLATLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 705
            ++F MT GG+SKAS+GINLSED+FAG+N TIRG  + FKEYVQVGKGRDVG+QQ YKFEAKL+QG AEQ+LSRD+NR+  RLDFFRL SFY+GG+G+Y+ N + + T+  VVY +LALA+F EE +  R + PEG LQ++L+GMG+L TMP+L TL VEKG+L A+ E+  + LSGGP+YF+FHI+T+++YF QTL+AGGA+YR TGR FVT HS FD+ +RFFA+SH YLGFE+
Sbjct:  124 KLFVMTEGGMSKASRGINLSEDVFAGFNATIRGHSVGFKEYVQVGKGRDVGLQQTYKFEAKLAQGNAEQSLSRDMNRICGRLDFFRLFSFYYGGIGHYMANTMVMFTLVVVVYTMLALAIFKEEGVNGRAMHPEGVLQLLLSGMGILQTMPLLITLTVEKGVLAAISEIGFMILSGGPLYFIFHIETKSYYFSQTLMAGGAKYRPTGRAFVTSHSSFDENFRFFASSHIYLGFEI 358          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13463.2815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFR3_9PHAE4.250e-13588.371,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CC... [more]
A0A835Z4B5_9STRA3.370e-12083.831,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A7S0GHQ8_9STRA3.090e-10167.23Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S2UV62_9STRA2.900e-9970.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3LH45_9STRA6.200e-9965.96Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A835Z1S2_9STRA3.620e-9882.591,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A7S2QVX6_9STRA1.120e-9468.091,3-beta-glucan synthase (Fragment) n=1 Tax=Tripar... [more]
B8CDT6_THAPS8.910e-9464.26Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
F0YA81_AURAN1.600e-9267.231,3-beta-glucan synthase n=1 Tax=Aureococcus anoph... [more]
A0A7S3H8Z7_9STRA2.600e-9264.26Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13463contigH-canaliculatus_F_contig13463:1139..3058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score306.6
Seed ortholog evalue9.8e-81
Seed eggNOG ortholog44056.XP_009037407.1
KEGG koko:K11000
EggNOG free text desc.1,3-beta-D-glucan synthase activity
EggNOG OGsKOG0916@1,KOG0916@2759
COG Functional cat.S
CAZyGT48
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlycosyl transferase, family 48
Ec32 orthologEc-08_004910.1
Exons3
Model size705
Cds size693
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13463.2815.1prot_H-canaliculatus_F_contig13463.2815.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13463 1139..3046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929086.6922486-CDS-H-canaliculatus_F_contig13463:1138..14291622929086.6922486-CDS-H-canaliculatus_F_contig13463:1138..1429Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13463 1139..1429 -
1696845674.3269448-CDS-H-canaliculatus_F_contig13463:1138..14291696845674.3269448-CDS-H-canaliculatus_F_contig13463:1138..1429Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13463 1139..1429 -
1622929086.7090116-CDS-H-canaliculatus_F_contig13463:2102..24111622929086.7090116-CDS-H-canaliculatus_F_contig13463:2102..2411Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13463 2103..2411 -
1696845674.3416457-CDS-H-canaliculatus_F_contig13463:2102..24111696845674.3416457-CDS-H-canaliculatus_F_contig13463:2102..2411Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13463 2103..2411 -
1622929086.7213104-CDS-H-canaliculatus_F_contig13463:2953..30461622929086.7213104-CDS-H-canaliculatus_F_contig13463:2953..3046Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13463 2954..3046 -
1696845674.3584085-CDS-H-canaliculatus_F_contig13463:2953..30461696845674.3584085-CDS-H-canaliculatus_F_contig13463:2953..3046Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13463 2954..3046 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929086.7381592-UTR-H-canaliculatus_F_contig13463:3046..30581622929086.7381592-UTR-H-canaliculatus_F_contig13463:3046..3058Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13463 3047..3058 -
1696845674.3674138-UTR-H-canaliculatus_F_contig13463:3046..30581696845674.3674138-UTR-H-canaliculatus_F_contig13463:3046..3058Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13463 3047..3058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13463.2815.1

>prot_H-canaliculatus_F_contig13463.2815.1 ID=prot_H-canaliculatus_F_contig13463.2815.1|Name=mRNA_H-canaliculatus_F_contig13463.2815.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=231bp
MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQ
IYKFEAKLSQGAAEQTLSRDVNRLGERLDFFRLMSFYFGGLGYYVGNFIT
VLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQMMLAGMGLLNTMPMLA
TLMVEKGLLVALGEVIQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYR
ATGRGFVTHHSCFDDLYRFFANSHFYLGFEV
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mRNA from alignment at H-canaliculatus_F_contig13463:1139..3058-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13463.2815.1 ID=mRNA_H-canaliculatus_F_contig13463.2815.1|Name=mRNA_H-canaliculatus_F_contig13463.2815.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1920bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13463:1139..3058- (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGTTCTTCATGACGGCAGGCGGCGTGAGCAAGGCGTCCAAGGGGAT CAACCTTTCCGAGGACATCTTCGCGGGGTACAACGGGACCATCCGGGGAG GACAGGTGCGAAGTTATTGCTGTGATGCTTGTCAGCGCTGTCGACCCTGC GTGTGTGTGTGTGCCCTTTTTTTTGTCCTTCGGCAGCCATGAAAGAAAAC TTGTGGCGTTGTTTCGTCTGTCGTCGTACCGCAGTCGTGGGCCATTGAGG ACATCGCGGTCGCACGCGTTTGTCTTGTTCGGGGTGGGGGGTAGTTCTAC GAAGGGTGCCCGATCTTGCGGGATGTTCCTGGTGCCACCGAAGACCACGG ACAACTCCTCCCATCCTAATCGTGCGAAGGGCCGGGTGCTACTCAAGCGG CCGACCGTCTGTTCGGCCGTGGGCCGTCGCTTGTGCTTTTTTACCGTGTG AAGCACAATCCCGACGTCGCTTTTGGTTCGCGCGGGCGTGGTGGCTAGAG TTACCCCAGCCCAACACCTCTCACCCTCTTCCCTCCCGTAGACGGCGCCT CATCCGTATACACCCCACCCCGACTCCATCTCTATTATTTCCCCGTGGCC GCCGACCCTCGATCCTTCCACCCCCCCCCCCGCTATTCCCGATGCAGATC TTCTTCAAGGAGTACGTCCAGGTGGGCAAGGGGCGTGACGTGGGCATGCA GCAGATCTACAAGTTCGAGGCCAAGCTGTCCCAGGGCGCAGCAGAGCAGA CGCTCTCCCGCGACGTCAACCGCCTCGGCGAACGCCTGGACTTCTTCCGC CTCATGTCCTTCTACTTCGGAGGCCTGGGCTACTACGTCGGCAACTTCAT CACGGTGCTGACGGTGACGTTCGTCGTGTACTTCGTGCTCGCCCTCGCCG TCTTCGACGAGGAATCGATCGGGGACCGCAAGCTCATCCCGGAGGGGAAC CTGCAGGTGCGTTCGTGCGCGCGTTGGGGTGTCCTTGGTCTCGGAGGTGG GTGGGTGCGCGATCGAGGGTTGCGGCAGAGAGAGAGAGAGAGCGGAGGAG ATTCTCCTTCTCCGGTGGCATTTCTGTCTTTGACGCCTGGCTTGGTTTGC GATGAGCGCACCGCGGTGGCTTCCCTTTCGGCGTGCTTTGGCATTGTTCC TCCGGAGTCGGGTGGCGGCGCACGCGATCCAGGCCTCGGAGAATCGAAAG CGATTTGTCTGTACTGTTGCGGGAATCGTACGGGCGGTGATGTCTTCTCC ATGTACAAGTATTTGCCCAGCCAAGTCAGCGACCGCAGCACAGCCGGGGG GCATGTGGACGGGAGCTCCCCTCAGCCAGAGGCGGGATGCCTGTAGGATC TTTAGCAAACTCTGGCAAGGGGGGGAAACGTCCTAAGGTAGTTCTTCCTT CGTTATTTGGTCGGCCTTCGGGCACTCCTACCTTATCTGAGGTGTCCTAA GGACGACACAGCCGTCCACCTGTGGCCATGGGCAGCTCCCGCCCACCTGT GCGGGTCTGCACGCCTTGCGCTCGAGGCAGTCCGCCGCACGAACTGCCGG CGTCCGCAGCAACTCCCGCACTGACGTTGCCGAGTCTCCTCTCTCCTCCT CCGCCACTTAAAAAAAACACACAACAAAGATGATGCTCGCGGGCATGGGG CTACTCAACACGATGCCCATGCTGGCGACCCTGATGGTGGAGAAGGGGCT GCTCGTCGCCCTCGGGGAGGTCATCCAGGTCTTCCTCAGCGGGGGGCCCA TGTACTTCATGTTCCACATCCAGACGCGGGCGCACTACTTCTACCAGACC CTGCTGGCCGGAGGGGCCCAGTACCGCGCCACCGGGAGGGGCTTCGTGAC TCACCACTCCTGCTTCGACGACCTCTACCGCTTTTTCGCCAACTCGCACT TCTACCTCGGCTTCGAGGTA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13463:1139..3058-

>mRNA_H-canaliculatus_F_contig13463.2815.1 ID=mRNA_H-canaliculatus_F_contig13463.2815.1|Name=mRNA_H-canaliculatus_F_contig13463.2815.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1386bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13463:1139..3058- (Hapterophycus canaliculatus Oshoro5f female)
ATGACGGCAGGCGGCGTGAGCAAGGCGTCCAAGGGGATCAACCTTTCCGA
GGACATCTTCGCGGGGTACAACGGGACCATCCGGGGAGGACAGATGACGG
CAGGCGGCGTGAGCAAGGCGTCCAAGGGGATCAACCTTTCCGAGGACATC
TTCGCGGGGTACAACGGGACCATCCGGGGAGGACAGATCTTCTTCAAGGA
GTACGTCCAGGTGGGCAAGGGGCGTGACGTGGGCATGCAGCAGATCTACA
AGTTCGAGGCCAAGCTGTCCCAGGGCGCAGCAGAGCAGACGCTCTCCCGC
GACGTCAACCGCCTCGGCGAACGCCTGGACTTCTTCCGCCTCATGTCCTT
CTACTTCGGAGGCCTGGGCTACTACGTCGGCAACTTCATCACGGTGCTGA
CGGTGACGTTCGTCGTGTACTTCGTGCTCGCCCTCGCCGTCTTCGACGAG
GAATCGATCGGGGACCGCAAGCTCATCCCGGAGGGGAACCTGCAGATCTT
CTTCAAGGAGTACGTCCAGGTGGGCAAGGGGCGTGACGTGGGCATGCAGC
AGATCTACAAGTTCGAGGCCAAGCTGTCCCAGGGCGCAGCAGAGCAGACG
CTCTCCCGCGACGTCAACCGCCTCGGCGAACGCCTGGACTTCTTCCGCCT
CATGTCCTTCTACTTCGGAGGCCTGGGCTACTACGTCGGCAACTTCATCA
CGGTGCTGACGGTGACGTTCGTCGTGTACTTCGTGCTCGCCCTCGCCGTC
TTCGACGAGGAATCGATCGGGGACCGCAAGCTCATCCCGGAGGGGAACCT
GCAGATGATGCTCGCGGGCATGGGGCTACTCAACACGATGCCCATGCTGG
CGACCCTGATGGTGGAGAAGGGGCTGCTCGTCGCCCTCGGGGAGGTCATC
CAGGTCTTCCTCAGCGGGGGGCCCATGTACTTCATGTTCCACATCCAGAC
GCGGGCGCACTACTTCTACCAGACCCTGCTGGCCGGAGGGGCCCAGTACC
GCGCCACCGGGAGGGGCTTCGTGACTCACCACTCCTGCTTCGACGACCTC
TACCGCTTTTTCGCCAACTCGCACTTCTACCTCGGCTTCGAGGTAATGAT
GCTCGCGGGCATGGGGCTACTCAACACGATGCCCATGCTGGCGACCCTGA
TGGTGGAGAAGGGGCTGCTCGTCGCCCTCGGGGAGGTCATCCAGGTCTTC
CTCAGCGGGGGGCCCATGTACTTCATGTTCCACATCCAGACGCGGGCGCA
CTACTTCTACCAGACCCTGCTGGCCGGAGGGGCCCAGTACCGCGCCACCG
GGAGGGGCTTCGTGACTCACCACTCCTGCTTCGACGACCTCTACCGCTTT
TTCGCCAACTCGCACTTCTACCTCGGCTTCGAGGTA
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