mRNA_H-canaliculatus_F_contig13459.2810.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: D7G5T9_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T9_ECTSI) HSP 1 Score: 378 bits (970), Expect = 3.080e-125 Identity = 194/205 (94.63%), Postives = 199/205 (97.07%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLE+DAKIDNKRK S+KKELEWVR NPKARQAKSKARLARYDSLSQADEAADAAA ASLESIFIPPGNPLGTIVVEA+DLGKAKG+RLLYDGVNF LPRGGVVGIIGANG GK T+
Sbjct: 289 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLELDAKIDNKRKASIKKELEWVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFCLPRGGVVGIIGANGVGKSTL 493
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: W7U335_9STRA (Abc transporter atp-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U335_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.830e-87 Identity = 142/205 (69.27%), Postives = 170/205 (82.93%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGERRRVALC+LLL RPDLLLLDEPTNHLDAESVAW+EDFL + GTVVAITHDRYFLDNVA +ILELDRGEG PF+GNYSG+LE+K RLE +A+ DNKR +L +ELEW+RM+PKARQ K+KAR+ Y+ + QADE A + + +I+IPPG PL VVEA++LGK G+RLL+D V+FSLPRGGVVG+IGANG GK T+
Sbjct: 270 GGERRRVALCRLLLTRPDLLLLDEPTNHLDAESVAWLEDFLHDYKGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSGWLERKAKRLEQEAREDNKRAKALSRELEWMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTL 474
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A0K1EPE9_CHOCO (Energy-dependent translational throttle protein EttA n=2 Tax=Chondromyces TaxID=50 RepID=A0A0K1EPE9_CHOCO) HSP 1 Score: 262 bits (669), Expect = 1.550e-81 Identity = 136/205 (66.34%), Postives = 164/205 (80.00%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGERRRVALC+LLL +PD+LLLDEPTNHLDAESVAW+E FL + GTVVA+THDRYFLDNVA +ILELDRG+G P++GNYSG+LE+K RLE + K D+ RK +L++ELEWVRM P+ARQAKSKARLA Y+SL D+ A+ + I IP G LG V+EAK L KA G+RLL D +NF+LPRGG+VGIIG NGAGK T+
Sbjct: 166 GGERRRVALCRLLLEKPDILLLDEPTNHLDAESVAWLERFLGDYEGTVVAVTHDRYFLDNVAGWILELDRGQGIPYEGNYSGWLEQKKKRLESEQKQDSARKRTLERELEWVRMAPRARQAKSKARLAAYESLLAEDQ--KASKGPEITEIHIPAGPRLGNNVIEAKSLRKAFGDRLLIDDLNFALPRGGIVGIIGPNGAGKTTL 368
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A0K1Q635_9DELT (Energy-dependent translational throttle protein EttA n=2 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1Q635_9DELT) HSP 1 Score: 260 bits (664), Expect = 6.440e-81 Identity = 132/205 (64.39%), Postives = 163/205 (79.51%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGE+RRVALCKLLL RPD+L+LDEPTNHLDAESVAW+E FL + GTVVA+THDRYFLDNVA +ILELDRG GFPFKGNY+G+LE+K ARL + K ++ R+ LK+ELEWV+ +P+ARQAKSKARLA Y+ LS A + + + I IPPG LG +V+EA LGKA G++LLYD ++F LPR G+VG+IG NGAGK T+
Sbjct: 157 GGEKRRVALCKLLLSRPDMLILDEPTNHLDAESVAWLEHFLHEYPGTVVAVTHDRYFLDNVAGWILELDRGRGFPFKGNYTGWLEQKSARLSQEEKTESARQRKLKQELEWVQASPRARQAKSKARLAAYEELSAAAQKGPSDPT----EISIPPGPRLGDLVIEANGLGKAYGDKLLYDNLSFLLPRAGIVGVIGPNGAGKTTL 357
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A1F6TKE1_9PROT (Energy-dependent translational throttle protein EttA n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_65_34 TaxID=1817760 RepID=A0A1F6TKE1_9PROT) HSP 1 Score: 259 bits (663), Expect = 1.190e-80 Identity = 134/205 (65.37%), Postives = 158/205 (77.07%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGERRRVALC+LLL RPD+LLLDEPTNHLD ESVAW+E FL + GTVVA+THDRYFLDNVA +ILELDRG G P+KGNYS +LE+K RLE++ K + R ++K+ELEWVR NPK RQ KSKARLARY+ L+ + + IFIPPG LG +VVEAK L K GERLL D +NFSLPRGG+VG+IG NGAGK T+
Sbjct: 168 GGERRRVALCRLLLSRPDMLLLDEPTNHLDTESVAWLERFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGHGIPWKGNYSSWLEQKEKRLEIEEKQETARMRAMKQELEWVRTNPKGRQVKSKARLARYEELASQEYQK----RNETKEIFIPPGPRLGDLVVEAKGLSKGYGERLLIDNLNFSLPRGGIVGVIGPNGAGKTTL 368
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A7C4LVP3_9DELT (Energy-dependent translational throttle protein EttA n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4LVP3_9DELT) HSP 1 Score: 259 bits (663), Expect = 1.250e-80 Identity = 131/205 (63.90%), Postives = 166/205 (80.98%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGERRRVALC+LLL++PD+LLLDEPTNHLDAE+VAW+E L+ + GTV+A+THDRYFLDNVA +ILELDRG G P+KGNYS +LE+K ARLE++ K ++KR+ +L++ELEW+RM PKAR AKSKAR+ Y+ L + A LE I+IPPG LG +VVEA+D+ KA G+RLL +GVNFSLP GG+VG+IG NGAGK T+
Sbjct: 170 GGERRRVALCRLLLQKPDILLLDEPTNHLDAETVAWLEQHLRQYPGTVIAVTHDRYFLDNVAGWILELDRGRGIPWKGNYSSWLEQKQARLELEEKAESKRRKTLERELEWIRMAPKARHAKSKARITAYEHLLSEEPGRRAE---DLE-IYIPPGPRLGNLVVEARDVSKAFGDRLLMEGVNFSLPPGGIVGVIGPNGAGKTTL 370
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A1Q7P9B1_9BACT (Energy-dependent translational throttle protein EttA (Fragment) n=1 Tax=Nitrospirae bacterium 13_1_40CM_2_62_10 TaxID=1805265 RepID=A0A1Q7P9B1_9BACT) HSP 1 Score: 254 bits (648), Expect = 1.360e-80 Identity = 127/205 (61.95%), Postives = 162/205 (79.02%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGE+RRVALC+LL++ PD+LLLDEPTNHLDAESV W+E L+ + GTV+A+THDRYFLDNVA +ILELDRG G PF+GNYS +LE+K ARLE + K ++KR+ +L++ELEW+RM PKARQAK KAR+ RY+ L D A LE I+IPPG LG IVV+A L KA G+++L++ V+F LPRGG+VG+IG NGAGK T+
Sbjct: 171 GGEQRRVALCRLLIQEPDILLLDEPTNHLDAESVQWLEQHLRQYEGTVIAVTHDRYFLDNVAGWILELDRGHGIPFQGNYSSWLEQKQARLEREEKAESKRRKTLERELEWIRMAPKARQAKGKARITRYEQLLSQDSAT---LGEDLE-IYIPPGPRLGDIVVDAAGLSKAYGDKVLFENVSFGLPRGGIVGVIGPNGAGKTTL 371
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A6J4I3H9_9ACTN (Energy-dependent translational throttle protein EttA n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4I3H9_9ACTN) HSP 1 Score: 259 bits (663), Expect = 1.410e-80 Identity = 133/205 (64.88%), Postives = 164/205 (80.00%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGE+RRVALC+LLLR+PDLLLLDEPTNHLDAESVAW+E L+++ GTVVA+THDRYFLDNVA +ILELDRG G P++GNY+G+LE+K RL +AK D +R+ +L+ ELEW+RM+P+ARQAK KARL YD L A EA A A+ + IPPG LG +VVEA L K G+RLL+D V+FSLPRGG+VG+IG NGAGK T+
Sbjct: 173 GGEKRRVALCRLLLRQPDLLLLDEPTNHLDAESVAWLERTLQAYPGTVVAVTHDRYFLDNVAGWILELDRGSGIPYEGNYTGWLEQKQQRLAQEAKTDERRRRTLEHELEWIRMSPRARQAKGKARLTSYDQL--AAEAESAPERAAALELSIPPGPRLGDVVVEAGGLTKGFGDRLLFDDVSFSLPRGGIVGVIGPNGAGKTTL 375
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A410RJK5_CORCK (Energy-dependent translational throttle protein EttA n=16 Tax=Corallococcus TaxID=83461 RepID=A0A410RJK5_CORCK) HSP 1 Score: 259 bits (662), Expect = 1.720e-80 Identity = 132/206 (64.08%), Postives = 165/206 (80.10%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSL-SQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGE+RRVALC++LL +PDLLLLDEPTNHLDAESVAW+E LK++ GT+V ITHDRYFLDNVAE+ILELDRGEG P+KGNYS +L++K RLE++ K ++ R+ +LK+ELEWVR +PKARQAKSKAR+A Y+ L +Q+ + D + IPPG PLG +VVEAK L KA G+RLL D +NF LP GG+VG+IG NGAGK T+
Sbjct: 167 GGEKRRVALCRILLEKPDLLLLDEPTNHLDAESVAWLEQALKAYTGTIVCITHDRYFLDNVAEWILELDRGEGVPWKGNYSSWLDQKQKRLELEEKSESHRQKTLKRELEWVRASPKARQAKSKARIAAYEELFNQSQQKRDVTGE-----VMIPPGPPLGGLVVEAKGLRKAYGDRLLIDELNFKLPPGGIVGVIGPNGAGKTTL 367
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Match: A0A3B1AC52_9ZZZZ (Energy-dependent translational throttle protein EttA (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1AC52_9ZZZZ) HSP 1 Score: 258 bits (658), Expect = 1.850e-80 Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 1
Query: 31 GGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFLKSFGGTVVAITHDRYFLDNVAEYILELDRGEGFPFKGNYSGFLEKKMARLEMDAKIDNKRKTSLKKELEWVRMNPKARQAKSKARLARYDSLSQADEAADAAASASLESIFIPPGNPLGTIVVEAKDLGKAKGERLLYDGVNFSLPRGGVVGIIGANGAGKVTI 645
GGERRRVALCKLLL +PD+LLLDEPTNHLDAESVAW+E FL + GTVVA+THDRYFLDNVA +ILELDRG G P++GNYS +LE+K ARLE + K + R ++K ELEWVR PK R AKSK+R+AR++ LS+ D A A + +FIPPG LG +V+EA +L K GERLLYD +NF+LPRGG+VGIIG NGAGK T+
Sbjct: 165 GGERRRVALCKLLLSKPDMLLLDEPTNHLDAESVAWLERFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGHGIPWEGNYSSWLEQKSARLEQEEKAEGARIKAMKTELEWVRTAPKGRHAKSKSRIARFEELSKQDFTARNATN----ELFIPPGPRLGDMVIEATNLKKGFGERLLYDNLNFNLPRGGIVGIIGPNGAGKTTL 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13459.2810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13459.2810.1 >prot_H-canaliculatus_F_contig13459.2810.1 ID=prot_H-canaliculatus_F_contig13459.2810.1|Name=mRNA_H-canaliculatus_F_contig13459.2810.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=215bp DDDDPNPNNPGGERRRVALCKLLLRRPDLLLLDEPTNHLDAESVAWMEDFback to top mRNA from alignment at H-canaliculatus_F_contig13459:352..3022+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13459.2810.1 ID=mRNA_H-canaliculatus_F_contig13459.2810.1|Name=mRNA_H-canaliculatus_F_contig13459.2810.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2671bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13459:352..3022+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13459:352..3022+ >mRNA_H-canaliculatus_F_contig13459.2810.1 ID=mRNA_H-canaliculatus_F_contig13459.2810.1|Name=mRNA_H-canaliculatus_F_contig13459.2810.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1290bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13459:352..3022+ (Hapterophycus canaliculatus Oshoro5f female)back to top |