mRNA_H-canaliculatus_F_contig13457.2808.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: D7FN92_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN92_ECTSI) HSP 1 Score: 292 bits (747), Expect = 3.740e-89 Identity = 140/148 (94.59%), Postives = 147/148 (99.32%), Query Frame = 2
Query: 17 DGSTYRHRLSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGPRRLDTLHTNT 460
+GS+YRHRLSNVNFINMGR+Q+IKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGK+HLFKRSLLLIKSWWVYESRAYTGSNMLSRITE+ALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCW IEGPRRLDTLHTN+
Sbjct: 747 EGSSYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIKSWWVYESRAYTGSNMLSRITESALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWCIEGPRRLDTLHTNS 894
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: A0A6H5KVP2_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP2_9PHAE) HSP 1 Score: 285 bits (728), Expect = 3.910e-86 Identity = 136/145 (93.79%), Postives = 143/145 (98.62%), Query Frame = 2
Query: 29 YRHRLSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGPRRLDTLHTNTS 463
YRHRLSNVNFINMGR+Q+IKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGK+HLFKRSLLLIKSWWVYESRAYTGSNMLSRITE+ALATMVLAVVNQHHARLHTPLQVMA+FF MHSHFDWSRYCW IEGPRRLDTLHTN++
Sbjct: 821 YRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIKSWWVYESRAYTGSNMLSRITESALATMVLAVVNQHHARLHTPLQVMAVFFHMHSHFDWSRYCWCIEGPRRLDTLHTNSN 965
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: A0A7N2R4X3_QUELO (Uncharacterized protein n=2 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2R4X3_QUELO) HSP 1 Score: 113 bits (282), Expect = 4.950e-28 Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 2
Query: 32 RHRLSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGP 430
R + N++ I+ ++R+KC+V N + VDI NQ+G + T+ LE+ D+L+GK+HLFKRS++LIK+W YESR + L ++ AL T+VL + +Q H+ L+ PL V+ F S FDW YC S+ GP
Sbjct: 83 RFEVKNIHCID-AEVKRVKCIVQN-IVVDISFNQLGGLCTLCFLEQVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGL--LSTYALETLVLYIFHQFHSSLNAPLAVLYRFLDYFSRFDWESYCISLSGP 211
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: UPI001244B807 (uncharacterized protein LOC115990562 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001244B807) HSP 1 Score: 112 bits (281), Expect = 1.430e-27 Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 2
Query: 32 RHRLSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGP 430
R + N++ I+ ++R+KC+V N + VDI NQ+G + T+ LE+ D+L+GK+HLFKRS++LIK+W YESR + L ++ AL T+VL + +Q H+ L+ PL V+ F S FDW YC S+ GP
Sbjct: 52 RFEVKNIHCID-AEVKRVKCIVQN-IMVDISFNQLGGLCTLCFLEQVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGL--LSTYALETLVLYIFHQFHSSLNAPLAVLYRFLDYFSRFDWESYCISLSGP 180
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: A0A7N2LR45_QUELO (Uncharacterized protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LR45_QUELO) HSP 1 Score: 112 bits (281), Expect = 1.750e-27 Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 2
Query: 32 RHRLSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGP 430
R + N++ I+ ++R+KC+V N + VDI NQ+G + T+ LE+ D+L+GK+HLFKRS++LIK+W YESR + L ++ AL T+VL + +Q H+ L+ PL V+ F S FDW YC S+ GP
Sbjct: 70 RFEVKNIHCID-AEVKRVKCIVQN-IMVDISFNQLGGLCTLCFLEQVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGL--LSTYALETLVLYIFHQFHSSLNAPLAVLYRFLDYFSRFDWESYCISLSGP 198
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: D8SJ08_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SJ08_SELML) HSP 1 Score: 114 bits (284), Expect = 1.940e-27 Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 2
Query: 38 RLSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGPRRLDTL 448
R+ V +I ++ IKC+V+N + VDI NQ+G + T+ LEE D+L+G++HLFKRS++L+K+W YESR + L I+ AL T+VL + + HA L PL V+ F + S+FDW +YC S+ GP L L
Sbjct: 101 RVKEVQYIQAEVVKIIKCLVEN-IVVDISFNQLGGLCTLCFLEEVDRLIGRDHLFKRSIILVKAWCYYESRILGAHHGL--ISTYALETLVLYIFHVFHASLRGPLGVLYRFLEFFSNFDWDKYCLSLWGPIPLSAL 234
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: J3MP51_ORYBR (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3MP51_ORYBR) HSP 1 Score: 116 bits (290), Expect = 3.250e-27 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 2
Query: 41 LSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGPRRLDTL 448
L + FI+ ++ IKCV+DN + VDI NQ+G ++T+ LE D +GKNHLFKRS++LIK+W +ESR + L I+ AL T+V+ + N H LH+PL+ + F + S FDW +YC S+ GP L TL
Sbjct: 54 LKGLQFID-AEVKLIKCVIDN-IVVDISFNQIGGVSTLCFLELVDHEVGKNHLFKRSIMLIKAWCYHESRILGAHHGL--ISTYALETLVVYIFNMFHKSLHSPLEALYKFLEYFSKFDWDKYCISLNGPVALSTL 185
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: A0A2P6SLN8_ROSCH (Putative PAP/25A-associated, polymerase, nucleotidyl transferase domain-containing protein n=5 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SLN8_ROSCH) HSP 1 Score: 114 bits (284), Expect = 9.530e-27 Identity = 57/126 (45.24%), Postives = 85/126 (67.46%), Query Frame = 2
Query: 71 RLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGPRRLDTL 448
+++ IKC V+N +AVDI NQV + T+ LE+ DQ++G++HLFK+S++LIK+W YESR + L I+ AL T+VL ++N H+ L PLQV+ F + +S FDW+ YC SI GP L ++
Sbjct: 116 KVKIIKCTVNN-IAVDISFNQVAGLCTLCFLEQADQVVGRDHLFKKSIILIKAWCYYESRTVGAPHGL--ISTYALETLVLYIINLFHSSLRGPLQVLHRFLEYYSKFDWTNYCISINGPVSLSSV 238
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: J3NCN7_ORYBR (Uncharacterized protein n=7 Tax=Oryza brachyantha TaxID=4533 RepID=J3NCN7_ORYBR) HSP 1 Score: 114 bits (286), Expect = 1.130e-26 Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 2
Query: 41 LSNVNFINMGRLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGPRRLDTL 448
+ + FIN ++ IKCV++N + VDI NQ+G ++T+ LE D+ +GKNHLFKRS++LIK+W YESR + L ++ AL T+VL + N H LH PL+ + F + S FDW +YC S+ GP L +L
Sbjct: 73 IKGLQFIN-AEVKLIKCVIEN-IVVDISFNQIGGVSTLCFLELVDRKVGKNHLFKRSIMLIKAWCYYESRILGAHHGL--LSTYALETLVLYIFNIFHKSLHGPLEALYKFLEYFSKFDWEKYCISLNGPVLLSSL 204
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Match: UPI0002C32AA2 (uncharacterized protein LOC101302013 isoform X1 n=2 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C32AA2) HSP 1 Score: 114 bits (285), Expect = 1.350e-26 Identity = 56/126 (44.44%), Postives = 82/126 (65.08%), Query Frame = 2
Query: 71 RLQRIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWSIEGPRRLDTL 448
+++ IKC V+N + VDI NQV + T+ LE+ DQ +G++HLFK+S++LIK+W YESR + L I+ AL T+VL ++N H+ LH PLQV F + + +FDW YC SI GP L ++
Sbjct: 127 KVKIIKCTVNN-IPVDISFNQVAGLCTLCFLEQVDQFIGRDHLFKKSIILIKAWCYYESRTLGAQHGL--ISTYALETLVLCIINLFHSSLHGPLQVFHRFLEYYGNFDWQNYCISINGPVSLSSV 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13457.2808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13457.2808.1 >prot_H-canaliculatus_F_contig13457.2808.1 ID=prot_H-canaliculatus_F_contig13457.2808.1|Name=mRNA_H-canaliculatus_F_contig13457.2808.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=155bp WGGGGRRFDLPPPPQQRELHQHGPSPEDQVRRGQPGGGRHRRQPGRRHRDback to top mRNA from alignment at H-canaliculatus_F_contig13457:262..1732+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13457.2808.1 ID=mRNA_H-canaliculatus_F_contig13457.2808.1|Name=mRNA_H-canaliculatus_F_contig13457.2808.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1471bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13457:262..1732+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13457:262..1732+ >mRNA_H-canaliculatus_F_contig13457.2808.1 ID=mRNA_H-canaliculatus_F_contig13457.2808.1|Name=mRNA_H-canaliculatus_F_contig13457.2808.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=930bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13457:262..1732+ (Hapterophycus canaliculatus Oshoro5f female)back to top |