mRNA_H-canaliculatus_F_contig134.2764.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig134.2764.1 vs. uniprot
Match: A0A6H5L2U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U9_9PHAE) HSP 1 Score: 1384 bits (3581), Expect = 0.000e+0 Identity = 889/1646 (54.01%), Postives = 1039/1646 (63.12%), Query Frame = 1
Query: 4 NPRELFPVRDDFIRSAWVRRARTERAQEYEELYPYFSARPAAA-LLRATTGHATTAVPATSAAMSTKKTEENAAGTQQLEIHTRLMPSTKEIGNSVAEPTVTATTTSSSVTDPSPPCRGSRGERRHMGVGTGPKNVAELRRAFRRLEPEKMFRAPRAKGEPIWAYWGDAEGGDFDRVQRQSQP--PLPPGKRARTKDGFVLVPAKDLQELRRMEGALRRERGVLNAHCLLALNEGEVSAHRPLELTRMAVHGACGREMADSLREYRSWVARNRGXXXXXXXRQKGAKIVAAADPQTALARYQASSTATAGAADSWCGVGKRAREAASKERTAELKRYPVGWRTLRWVMMKRQAELRSQAAEAAAMFAEEMEQRHKERYLEAWERRHDYDLYCVLAGQFWPLEAKAFRACSRPGKKLSLEIQCPARVIQRMWKTCWPFRKHRKRKGCIGLQAIWRGHRVRKRWRPIVRLRTRHGRRAVIHPCFSSWTRFARVRRWARRRFEEIEGHWERACFTAWAEWTSNLAAEKQRKLERAGRTLRNVAAYRSFRS----------------------------------------------WKTYTSTTRRAHQLYARAVGHPSMTAWVQYVDEARRQRKRRGAAVTIQRHARGYVGRVRYQATRTIIYGFDRLMSARRARHFLRQALAAAHRRAAEDLLQSGSDAEITVGVLREEKRLAKMQKELRAADAAVRRAVTRRLDGGWFSSTARLASRHSSLREGGGRGELRRQIKAVREEWKALEDKAAAXXXXXXALEGNFAPASATPAEDAARSAAAGAALGGTWPKLGLSRLLPWKDKEQ---------RRGSAVLRAGSSRGDLAPSGVETRSEAFPPPTASSSEIGRGPQSAATKEGAAMTGGGNEKGGTQVAPIRQISRSAGEAEREARRRILSRHRDLAREIVVHDFDVRNPPPLKCCAPGCGATFTRDEHYLAHWDS-GASAARRELSLQRHEPDDP-SRPGSPP--ESPHREAARGSPRTPRPAAQPGRSPPKLSPGK---RARTSTIAIGRPLTPAEPXXXXXXXXXXXXXXQSLNSLAVGVEAGAGHPDLGGEDVASFHLVVANKADQGAVRRG---------EESSSVTGFELLSAYITRVWGRGMAYNTLLFIDAVESWRRRSLTTEPAFAEGAADMRREFLCPEAPREVSLPVDTRQGLMRVLDTFAEDALDLAAAGAAEIGRKWGVDDHVVADKDWSAGAGSSLV-------------------GEGGRNSKEPRGNSEVGTTPNNNSSSGIGGRNRTAQDDAEGPSDRGAVAGFGANPQPKQXXXXXXXXXXXXXXQHGRTSLVSPAREGSPASXXXXXXXXXXXXANPNCLRPTSFDEAHFQALAHLCRMVGPGFWVSDLGRRANVLRLKELKRKRGAAREIVRLERRGRLANEAAEIKKQLLDGRDKEMEALVQPALEAASDSVLEALLLSTAARVELLGLQELEVIREKEMVAEAATVEAVWVVEPPLLEGLLDEEISAFCSEGEERELMALEDDWVPPEDRIIDFPDNFSTAMVVYAFDMDSIPGGEEGACQAATTIQLCWRQRSARVEARRRLAQVYVKRVGAGPGEVYYEHTITGECQWERPLIAFRLFPNSSW 4662
NPR LFPVRDDFIRSAWVRR RT+RAQEYEELYP F R + LL T + TA T A + E AG RL P + G AT ++ T P RG RRHMGVGTG N+AELRRAFRRLEPE MFRAPR GEPIWAYWGD + PLPPGKRA TKDGFVLVPAK+L ELR +EG LR+ERGVLNAHCL+ NEGEVSAHRPLELTRMAVH ACG EMA++LREYR+W AR+R R+K A P++AL R S+ + G G GK +R AAS+ R AEL+R P GWR+LRWVMMKRQAEL+SQA EAAAMFAEE EQR KER+LEAWERRHDYDLYCVLAGQFWPLEA FRACSRPG+KL L+I+ PAR RKRKGC+G Q++WRG+RVRKRW P++RLR RHGRR++I PCFSSW R ARV+ WARRRFEEIEG WER+CF AWAEWT+NLAAE+QRKLERAG TLRN+AAYRSF W++Y TTR+AH+LYARAVG SM AWVQYV A+RQR ++ AAVTIQRHARGY+ R RY+AT+TII+GF+ LM+ARRAR F+RQALAAAHR+A E+LLQSG DAEIT G+ REEKRLAK+QKE++AADAAVRRAVT+RL GGW T R ASR G GELRR+ +AV+EEWKALE A + G PA+A+ D+ LGG WPK L K + + SR AP+G E R +E + P AA + +GGT EAEREA RRIL+R R LAREI+VHDFDVRNPPPL CCAPGCG TFT++EHYL+HWD+ GA+ A R+L L RH PD SRP SPP E+P R+ RG ++P P ++P TSTIA + A L EA AGHP+ GG+ +ASFHLVVA+KAD VRRG + + GF+L+SAY+TRVWG G AYNTLLF+DAV++WRR +PAFAEGAA++RREFLCP APRE SLP +TR+ LMR LDT +D LD A G + G + G DD V ++ G EGGR S GN+ +SS G GG TA+ +A R +A A QP+Q XXXXX XXXXXXXXXX +P+ LRPTSFDEA FQALAHL R+VGPGF+ SDLGRRA L +ELKR+R AA +I RLERR RLANEAAE+++QL GRD E+E++ Q AL+ AS SV+EALL S A E+L QELEV RE++MVAEAATVEAVWVVEPPLLE LLD EI A SEGEERE M+LEDDWVPPE R+ +F + STAM D +SIPGGEEGA +AA TIQL WRQRSARVEARRRLAQVYVKR GA PGEV+YE+T+TGE QWERPLIA+RLFP SSW
Sbjct: 56 NPRALFPVRDDFIRSAWVRRDRTQRAQEYEELYPCFFRRSSTGPLLNDRTTASQTAAAGTPATRPAAR--ETQAG--------RLAPDRHQRGPGAPYTKDLATAGEAATT---PISRGCARSRRHMGVGTGSGNIAELRRAFRRLEPENMFRAPRVDGEPIWAYWGDGKXXXXXXXXXXXXXXXPLPPGKRASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGEVSAHRPLELTRMAVHDACGSEMANALREYRAWTARSRSRGDGG--REKRGSSTA---PRSALTRGNRSTVMSTG------GCGKHSRAAASQARVAELQRTPAGWRSLRWVMMKRQAELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPLEAHVFRACSRPGRKLFLDIEAPAR--------------DRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGSTLRNIAAYRSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASLFLPFWNTFWQSYIRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLARSRYRATQTIIHGFNHLMAARRARQFVRQALAAAHRKATEELLQSGYDAEITAGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWL--TIRPASR--------GGGELRREARAVQEEWKALEAAQTASAAATATVPGTT-PANASVERDSKDGXXXXXXLGGAWPKTVFPGRLLGKGRRKDXXXXXXXXXXXXXXXXXXXSRPKAAPAGGEVRG--------GRTEGAQAPAKAAVPP--------SSRGGTA------------EAEREAWRRILARERRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQNEHYLSHWDAAGAADAARKLLL-RHVPDPLLSRPSSPPLFETPKRQD-RGCQKSPSRPTMPTDDQQSVAPSTVSTTGSTSTIAWRQQQLRAPVEQQQLRHGCPAAEEAKL-------EAEAGHPERGGKGIASFHLVVADKAD---VRRGXXXXXSEVTDHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLPDDVLDGTAGGRGD-GDEGGDDDAVGGEEVGGDGRAPDAELPFTDEKRRPETRVDLSDGDEGGRRSISTAGNAAT-----RDSSGGSGGPRATAKSNARTKFSRNKIARPSATRQPQQQRRPVSVPGXXXXXXXXXXXXXX----------XXXXXXXXXXARDPDGLRPTSFDEAQFQALAHLSRVVGPGFFASDLGRRAAALHQEELKRRREAAHDIARLERRSRLANEAAEVRRQLSRGRDVEIESIAQSALDVASGSVVEALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVWVVEPPLLEDLLDLEIDALISEGEEREHMSLEDDWVPPEVRLANFRNGLSTAMACV-IDFNSIPGGEEGAHRAANTIQLAWRQRSARVEARRRLAQVYVKRAGAAPGEVFYENTVTGESQWERPLIAYRLFPYSSW 1595
BLAST of mRNA_H-canaliculatus_F_contig134.2764.1 vs. uniprot
Match: D8LGM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM7_ECTSI) HSP 1 Score: 1201 bits (3108), Expect = 0.000e+0 Identity = 783/1509 (51.89%), Postives = 899/1509 (59.58%), Query Frame = 1
Query: 379 MGVGTGPKNVAELRRAFRRLEPEKMFRAPRAKGEPIWAYWGDAEGG--DFDRVQRQSQPPLPPGKRARTKDGFVLVPAKDLQELRRMEGALRRERGVLNAHCLLALNEGEVSAHRPLELTRMAVHGACGREMADSLREYRSWVARNRGXXXXXXXRQKGAKIVAAADPQTALARYQASSTATAGAADSWCGVGKRAREAASKERTAELKRYPVGWRTLRWVMMKRQAELRSQAAEAAAMFAEEMEQRHKERYLEAWERRHDYDLYCVLAGQFWPLEAKAFRACSRPGKKLSLEIQCPARVIQRMWKTCWPFRKHRKRKGCIGLQAIWRGHRVRKRWRPIVRLRTRHGRRAVIHPCFSSWTRFARVRRWARRRFEEIEGHWERACFTAWAEWTSNLAAEKQRKLERAGRTLRNVAAYRSFRSWK-------------------------TYTSTTRRAHQLYARAVGHPSMTAWVQYVDEARRQRKRRGAAVTIQRHARGYVGRVRYQATRTIIYGFDRLMSARRARHFLRQALAAAHRRAAEDLLQSGSDAEITVGVLREEKRLAKMQKELRAADAAVRRAVTRRLDGGWFSSTARLASRHSSLREGGGRGELRRQIKAVREEWKALEDKAAAXXXXXXALEGNFAPASATPAEDAARSAAAGAALGGTWPKLGLSRLLPWKDKEQRRGSAVLRAGSSRGDLAPSGVETRSEAFPPPTASSSEIGRGPQSAATKEGAAMTGG--GNEKGGTQV---APIRQISRSA-GEAEREARRRILSRHRDLAREIVVHDFDVRNPPPLKCCAPGCGATFTRDEHYLAHWDSGASAARRELSLQRHEPDDP-SRPGSPPES--PHREAARGSPRTPRPAAQPGRSPPKLSPGKRA---RTSTIAIGRPL--TPAEPXXXXXXXXXXXXXXQSLNSLAVGVEAGAGHPDLGGEDVASFHLVVANKADQGAVRRG---------------EESSSVTGFELLSAYITRVWGRGMAYNTLLFIDAVESWRRRSLTTEPAFAEGAADMRREFLCPEAPREVSLPVDTRQGLMRVLDTFAEDALDLAAAGAAEIGRKWGVDDHVVADKDWSAGAGSSLVGEGGR--------NSKEPR--------------GNSEVGTTPN---NNSSSGIGGRNRTAQDDAEGPSDRGAVAGFGANPQPKQXXXXXXXXXXXXXXQHGRTSLVSPAREGSPASXXXXXXXXXXXXANPNCLRPTSFDEAHFQALAHLCRMVGPGFWVSDLGRRANVLRLKELKRKRGAAREIVRLERRGRLANEAAEIKKQLLDGRDKEMEALVQPALEAASDSVLEALLLSTAARVELLGLQELEVIREKEMVAEAATVEAVWVVEPPLLEGLLDEEISAFCSEGEERELMALEDDWVPPEDRIIDFPDNFSTAMVVYAFDMDSIPGGEEGACQAATTIQLCWRQRSARVEARRRLAQVYVKRVGAGPGEVYYEHTITGECQWERPLIAFRLFPNSSW 4662
MGVGTG NVAELRRAFRRLEPE MFRAPR GEPIWAYWGD +GG + Q QPPLPPGKRA TKDGFVLVPAK+L ELR +EG LR+ERGVLNAHCL+ NEGE AEL+SQA EAAAMFAEE EQR KER+LEAWERRHDYDLYCVLAGQFWPLEA+AFRACSRPG+KL LEI+ PARVI RMW+T WPFRK RKRKGC+G Q++WRG+RVRKRW P++RLR RHGRR++I PCFSSW R ARV+ WARRRFEEIEG WER+CF AWAEWT+NLAAE+QRKLERAGRTLRN+AAYRSFRSWK +YT T R+AH+LYARAVG SM AWVQYV A+RQR+++ AAVTIQRHARGY+ R RY+AT+TII GF+RLM+ARRAR FLRQALAAAHR A E+LLQSG DAEITVG+ REEKRLAK+QKE++AADAAVRRAVT+RL GGW T R A R G GELRR+ +AV+EEWKALE AA A+A+ D+ LGGT PK LL K K + + RA G P + A K+ A +GG G GG Q A + SR EAEREA RRIL+R + LAREI+VHDFDVRNPPPL CCAPGCG TFT+DEHYLAHWD+GA+AA L R +PD SRP SPP S P R+ RG ++P P ++P + TST+A + PAE EA AGH + GG+ +ASFHLVVA+KAD +RRG + GF+L+SAY+TRVWG G AYNTLLFIDAV++WRR +PAFAEGAA++RREFLCP APRE SLP +TR+ LMR LDT +D LD AG + G + G DD AG G + G+G + K PR G + T N + S G GG A+ A+ R +A A QP+Q G XXXXXXXXXXX NP+ LRPTSFDEA FQALAHL R+VGPGFW SDLGR A L +ELKR+R AAREIVRLERRGRLANEAAE ALL S A E+L QELEV RE++MVAEAATVEAVWVVEPPLLE LLD EI A SEGEERE M++EDDWVPPE R+ DF + STAM D +SIPGGEEGA +AATTIQL WRQRSARVEARRRLAQVYVKR GAGPGEV+YE+T+TGE QWERPLIA+RLFP S+W
Sbjct: 1 MGVGTGSGNVAELRRAFRRLEPENMFRAPRVDGEPIWAYWGDGKGGRGEGGHAHGQPQPPLPPGKRASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGE--------------------------------------------------------------------------------------------------------------------AELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPLEAQAFRACSRPGRKLFLEIEAPARVIMRMWRTYWPFRKDRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWKAVRSVGVAVALVRLDFEASFRCTSQSYTRTARQAHRLYARAVGGTSMAAWVQYVGMAKRQRRQKSAAVTIQRHARGYLARGRYRATQTIIRGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITVGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWL--TIRPAFR--------GGGELRREARAVQEEWKALE---AAQIAAATTTAPGTTLANASVERDSKDXXXXXXXLGGTLPKTVFPGLLLRKGKPKD----ITRAARPDGGXXXXXXXXXXR---------------PTTEAEKKAAPASGGVRGGRTGGAQAPAKACVPPSSRGGTAEAEREAWRRILAREKLLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDAGAAAAAARKLLVRDDPDALLSRPSSPPFSGTPQRQD-RGCQKSPLRPTMPTDDQQSVAPSIGSITGSTSTVAWQQQQLRAPAEQQQLRHGFPAAEEAE---------AEAEAGHSERGGKGIASFHLVVADKAD---IRRGXXXXXXXXXXXSEIANHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFIDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLPDDVLD-GTAGGWDDGDESGDDD---------AGGGEEVGGDGRAPDAELPFADEKRPRETRVDLDLSDGDEGGRRSIRTAGNAATRDISGGSGGPRAIAKSKAQTKFSRNKIARPSATLQPQQQRRPVSAP--------GGAXXXXXXXXXXXXXXXXXXXXXXXXARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRLAASLHQQELKRRREAAREIVRLERRGRLANEAAE------------------------------ALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVWVVEPPLLENLLDLEIDALISEGEEREFMSIEDDWVPPEVRLADFRNGLSTAMACV-IDFNSIPGGEEGAHRAATTIQLAWRQRSARVEARRRLAQVYVKRAGAGPGEVFYENTVTGESQWERPLIAYRLFPYSNW 1299 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig134.2764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig134.2764.1 >prot_H-canaliculatus_F_contig134.2764.1 ID=prot_H-canaliculatus_F_contig134.2764.1|Name=mRNA_H-canaliculatus_F_contig134.2764.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1555bp RNPRELFPVRDDFIRSAWVRRARTERAQEYEELYPYFSARPAAALLRATTback to top mRNA from alignment at H-canaliculatus_F_contig134:4985..14584+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig134.2764.1 ID=mRNA_H-canaliculatus_F_contig134.2764.1|Name=mRNA_H-canaliculatus_F_contig134.2764.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9600bp|location=Sequence derived from alignment at H-canaliculatus_F_contig134:4985..14584+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig134:4985..14584+ >mRNA_H-canaliculatus_F_contig134.2764.1 ID=mRNA_H-canaliculatus_F_contig134.2764.1|Name=mRNA_H-canaliculatus_F_contig134.2764.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=9330bp|location=Sequence derived from alignment at H-canaliculatus_F_contig134:4985..14584+ (Hapterophycus canaliculatus Oshoro5f female)back to top |