mRNA_H-canaliculatus_F_contig13371.2744.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: D8LIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN4_ECTSI) HSP 1 Score: 291 bits (744), Expect = 1.000e-91 Identity = 138/182 (75.82%), Postives = 158/182 (86.81%), Query Frame = 1
Query: 4 PNYKDGGVSHQVAQLNRYLPKPKSKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQVDFTAIFQRNHIPSTFAGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
P+YKD GVSHQ AQLNRYLPKPK+KDG YL+DSKKSAADA E AVA GADREM+N+WKPT++LGQ+DFTAIFQRNHIPS+FAGHITFQ+STGNYHP+LYVNEFWLQQKHLLALNSTVE+VDL + ISPI LWKFQTMSQLESQW AQAK+GM+GDG+QDTFRE+ +++P
Sbjct: 232 PDYKDSGVSHQTAQLNRYLPKPKNKDGHYLVDSKKSAADAAVEKERKELDEKEAAVALAGADREMINYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQAKIGMAGDGEQDTFRELLAETNP 413
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: A0A836CN46_9STRA (Cleft lip and palate transmembrane protein 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN46_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.290e-36 Identity = 76/182 (41.76%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 4 PNYKDGGVSHQVAQLNRYLPKPKSKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQVDFTAIFQRNHIPSTFAGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
P ++ V+H V QLN Y P PK++ + L+ +K VEE + E+ NFWKPT+++ VD TA FQRNHIP+ FA I F A+TGNY+PI+ VNEFWLQ KH ALN+T L + P+GL K+Q MSQL QW +A++G+ + + D+ ++ D+SP
Sbjct: 223 PTHRPPDVTHVVHQLNTYRPLPKARKARNLL-AKGGKGGGVEEEQGEGERR----------EGEIGNFWKPTLAIQLVDMTADFQRNHIPAVFAEDIKFHAATGNYYPIVVVNEFWLQTKHYTALNATAPAAALAMSYRPVGLGKWQIMSQLARQWRTRARMGLQSESETDSIVDMLGDTSP 393
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: A0A7J7C120_TRIWF (Cleft lip and palate transmembrane protein 1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C120_TRIWF) HSP 1 Score: 92.4 bits (228), Expect = 1.680e-18 Identity = 49/182 (26.92%), Postives = 90/182 (49.45%), Query Frame = 1
Query: 4 PNYKDGGVSHQVAQLNRYLPKPKSKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQVDFTAIFQRNHIPSTFAGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
P Y+ ++ + YLPK K+ + L+ + K DA E E +++WKP +++ VD + + N +P A ++ + STGNYHP ++ NEFWL ++ L+ +N +V + L +++ PI + K+Q Q+E ++ Q G +G+ D + V + +P
Sbjct: 149 PEYQPTAAFGRMHPVVTYLPKSKADTRRKLLSNSK---DAQEGETASQVVDDSQVDLKDDGPVEWISYWKPNITINLVDDFSRYPHNAVPPNIAPYLYVEPSTGNYHPTVFFNEFWLLREKLIPINESVTELPLNLEVGPISMTKWQLFLQIEQSFQMQRNYGSMLEGEGDEIKRVFLEGNP 327
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: A0A1V9ZZA7_9STRA (CLPTM1-like membrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZA7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.020e-16 Identity = 53/182 (29.12%), Postives = 87/182 (47.80%), Query Frame = 1
Query: 7 NYKDGGVSHQVAQLNRYLPKPKSKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQVDFTAIFQRNHIPSTF-AGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
N+ H+ ++N Y P+ K + L + AVEE D ++ WKP +++ + ++ R P F A ++ +GNY PI+ +NEFWL ++ LL +N+TVET+ L ID PIG+ KF Q+E + Q +G S D D +++ D++P
Sbjct: 486 NFDPLATVHKYIEMNTYRPRAKVVKQRNLWKWSQEDEKAVEEVPVED-------------DNTYLSHWKPMLTINALVDHTVYPRGQPPQPFVAPYLMVDPISGNYLPIIKLNEFWLLEEQLLPINATVETLPLEIDFIPIGITKFALYHQMEDSFRMQEAMGTSSKRDSDAMKKMFADTNP 654
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: A0A1V9YRL3_9STRA (CLPTM1-like membrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRL3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.050e-15 Identity = 49/182 (26.92%), Postives = 90/182 (49.45%), Query Frame = 1
Query: 7 NYKDGGVSHQVAQLNRYLPKPKSKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQVDFTAIFQRNHIPSTF-AGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
NY ++ ++N Y P+ K + L +K + E D +++WKPT+++ + +++ R P F A ++ +GNY P+L++NEFWL + LL +NSTV T+ L I+ P+G+ KF Q++ ++ Q ++G S D D +++ D++P
Sbjct: 177 NYDPLATVYKHIEMNTYRPRAKVVKARNLWMTKSDELEVEPEVEVE--------------DPTYLSYWKPTLTINVLVDHSVYPRGQPPQPFVAPYLQVDPLSGNYLPVLHLNEFWLLDEQLLPINSTVATLPLEIEFYPLGITKFALYHQMDQSFKMQQEMGTSTKKDTDAMKKMFVDTNP 344
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: A0A067BZ31_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZ31_SAPPC) HSP 1 Score: 80.9 bits (198), Expect = 1.760e-14 Identity = 47/182 (25.82%), Postives = 92/182 (50.55%), Query Frame = 1
Query: 7 NYKDGGVSHQVAQLNRYLPKPKSKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQVDFTAIFQRNHIPSTF-AGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
NY + ++ ++N Y P+ K + L + ++A + E +A D V+ WKPT+++ + +++ R P F A ++ +GNY P+L++NEFWL + LL +N +V ++ L ++ + IG+ KF Q++ ++ Q +G S D D +++ D++P
Sbjct: 177 NYDELATVYKRIEMNTYRPRAKVTKQRNLWQADEAAENDQE------------MMAVVEEDTTYVSHWKPTLTIHVLVDHSVYARGQPPQPFVAPYLQVDPISGNYLPVLHLNEFWLLDEQLLPINGSVSSLPLEVEFAAIGMTKFALYHQMDQSFKMQQSMGTSSKRDTDAMKKMFIDTNP 346
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: K3X6Q4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6Q4_GLOUD) HSP 1 Score: 79.0 bits (193), Expect = 8.290e-14 Identity = 50/190 (26.32%), Postives = 88/190 (46.32%), Query Frame = 1
Query: 4 PNYKDGGVSHQVA-----QLNRYLPKPKSKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQVDFTAIFQRNHIPSTFAG---HITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
PN +D + +L + P+ K+ + L++S ++E A A G D V+ WKP ++ V ++ N P F H+ A Y P+LY+NEFW+ ++HLL +N++V + L + P+ L+KF +Q+E ++ Q G S D D +E+ +++P
Sbjct: 190 PNPEDSAYDRMASLNSTIELTTFRPRVKATKKRNLLES-------IKEEEEQEQAVAAEATALEGEDNTYVSMWKPAFAINVVHDANVYSANLKPPPFLATGMHVDHDAQL--YLPVLYMNEFWILEEHLLPVNNSVTALPLELSFYPLHLYKFALYTQMEQNFKNQQAAGTSTKKDTDKMKEMFIETNP 370
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: F4PTS7_CAVFA (Cleft lip and palate transmembrane 1 family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PTS7_CAVFA) HSP 1 Score: 78.2 bits (191), Expect = 1.510e-13 Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 190 REMVNFWKPTVSLGQVDFTAIFQRNHIPSTFAGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
+E+V WKPT+++ V + N +P+ F + Y PI++VNEFWL ++HL LN TVE ++LT+ I P+G +K+Q +Q++ + Q G +G+ D F+ + D++P
Sbjct: 187 KELVGHWKPTLTVTFVVDDQKYGPNSLPAEVMAQ--FNITGDKYSPIVFVNEFWLYREHLTMLNETVEDLNLTMSIYPLGTFKWQMYNQMQKSLDMQQTFG-AGEESGDDFKRMLTDTNP 303
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: A0A6A7G6K3_9CRUS (CLPTM1-like membrane protein cnrB (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6K3_9CRUS) HSP 1 Score: 75.5 bits (184), Expect = 1.340e-12 Identity = 49/159 (30.82%), Postives = 78/159 (49.06%), Query Frame = 1
Query: 79 DGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQV-DFTAIFQRNHIPSTFAGHITFQASTGN-YHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
DG+ ++DS+ + D R +V +W T++L V DFT ++ R IP +I Y PILY + FWL ++ LN TVE++ LT+ SPI +WK+Q +Q+E+ + Q G + +GD D R + +S+P
Sbjct: 258 DGRIIVDSESTVKDT----------------------RPIVGYWPSTLTLRLVVDFT-VYSRGGIPVQILPYIKLVPEHEELYFPILYHDTFWLLRETYTELNDTVESLSLTLQYSPITMWKWQLQTQMETSFAQQQSWGGAAEGDSDEMRRMFLESNP 393
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Match: A0A8K1CE17_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE17_PYTOL) HSP 1 Score: 75.1 bits (183), Expect = 1.760e-12 Identity = 46/182 (25.27%), Postives = 84/182 (46.15%), Query Frame = 1
Query: 10 YKDGGVSHQVAQLNRYLPKPK-SKDGKYLIDSKKSAADAVEEXXXXXXXXXXXAVAAPGADREMVNFWKPTVSLGQV-DFTAIFQRNHIPSTFAGHITFQASTGNYHPILYVNEFWLQQKHLLALNSTVETVDLTIDISPIGLWKFQTMSQLESQWEAQAKLGMSGDGDQDTFREVSDDSSP 549
Y ++ +L Y P+PK SK L +S +AVEE D ++ WKPT+ + + D T + P ++ + G Y P+LY+N+FW+ ++HLL +N++V + L I + ++KF +Q++ + Q G S D D+ + + +++P
Sbjct: 174 YDRTATIYRTVELTTYRPRPKISKKRNLLAKRNESEEEAVEETTE--------------VDSTYISMWKPTLLINPIFDDTVYTAKMKPPPFLMPYMKLEKDAGKYLPVLYLNDFWILEEHLLPINASVSALPLEIAFYTLPVYKFALYTQMDQNFRNQEATGTSSRRDTDSMKRMFLETNP 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13371.2744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13371.2744.1 >prot_H-canaliculatus_F_contig13371.2744.1 ID=prot_H-canaliculatus_F_contig13371.2744.1|Name=mRNA_H-canaliculatus_F_contig13371.2744.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=184bp NPNYKDGGVSHQVAQLNRYLPKPKSKDGKYLIDSKKSAADAVEEKERKEKback to top mRNA from alignment at H-canaliculatus_F_contig13371:293..2501+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13371.2744.1 ID=mRNA_H-canaliculatus_F_contig13371.2744.1|Name=mRNA_H-canaliculatus_F_contig13371.2744.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2209bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13371:293..2501+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13371:293..2501+ >mRNA_H-canaliculatus_F_contig13371.2744.1 ID=mRNA_H-canaliculatus_F_contig13371.2744.1|Name=mRNA_H-canaliculatus_F_contig13371.2744.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1104bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13371:293..2501+ (Hapterophycus canaliculatus Oshoro5f female)back to top |