mRNA_H-canaliculatus_F_contig1335.2732.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1335.2732.1
Unique NamemRNA_H-canaliculatus_F_contig1335.2732.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: D8LDS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS5_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 3.540e-94
Identity = 347/720 (48.19%), Postives = 373/720 (51.81%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIVVWGMDNAHHILNSLVVPNVVEFTVSLPWRVLLVLFPSMPXXXXXXXXXXXXXXXXXKKSGRP-GGTQRTRGKGLGSQLQHLNTRNKS-TARTISEAGRSGGRRVGADGRSPTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKAAKKDNASILVAELL----GDGIDDRAEGGKGQGTASSAAGDAADGERASPEGXXXXXXXXXXXRSFGEILRSAVTGSSEVRLRDHLFDLNTASPXXXXXXXXXXXXXXXXDPAHRQQGEGGVASASEESTPERGPSPRLPAVAGAQDGGNXXXXXXXXXXXXXXXXXXVSSRHPTRRRPTEFSEPVAVGVDVGXXXXXXXXXXXXXEIGGSASTIGGVGVRRRASAGFGDRGGVRTRAXXXXXSGGRTLMANNGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTRDGADGGXXXXXXXXXSSTAAAIADSRAKRLAEWRKKRADRARDEQAERNRRGRH-------EG-GXXXXXXXXXXXXXSGSGDVGGGNAVHPSVRGGGGGRLKASALPNANVLSSAPPPASNSRRFRHVERFRADMATGGHGSSYPPVSHPQETAVAAIGA 2118
            MPNWLASELCMVASF+LGAWKTFKVLKHGGTDYNLLKTWCLLGLLR FEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFER+VVWGMDNAHHILN+LVVPNVVEF VSLPWRVLLVLFP+MP   XXXXXXXXXXXXXX   G      Q   G G+ SQLQHLNT  K   A +  +   S G         P P                                               D K      AS LVAELL    G G   RA+G     T      D A    +       XX      RSFGEI+RSAVTG+SEVRLRDHLFD +TASP       XXXXXXXXX                            LPAV       N                    SRH TRRRP+EFS+P        XXXXXXXXX         +S +G  GVRRR        GG     XXXXX              XXXXXXXXXXXXXXXXXXXXXX                       T TR GAD       XXXX    AAIADSRAKRLAEWRKKRADRAR+E AE+ RR  +       EG G   XXXXXXXXXX     VG                                   S SRRFRHVERFR++MA+ G  +   P + P++ A AA GA
Sbjct:    1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRVFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHILNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSXXXXXXXXXXXXXXXXXGEGLRKKQAATGGGITSQLQHLNTPTKKRAAESTPKRAASAGAPSTQQQTPPLPARGSPSKTTPVAARNGVANAGS-------------------------DSKHGGG-GASALVAELLDADGGTGAASRADGAAAIATPVPFGDDIATSPESGGSERRGXXGRPSRRRSFGEIIRSAVTGNSEVRLRDHLFDFSTASPAPPVPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XLPAVV------NGNGKRRGREKVAVDGVIPARSRHTTRRRPSEFSDPAXXXXXXXXXXXXXXXXSDV------SSRVGREGVRRR-------NGGAXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXARTTADRRGGAATAAVARGGPRGTSTRAGADA-----TXXXXXXXXAAIADSRAKRLAEWRKKRADRAREEHAEKYRRSNNNFDGSEGEGYGATRXXXXXXXXXXXXEESVGSAGXXXXXXX----------------XXXXXXXXNSQSRRFRHVERFRSEMASNGFRA---PQNPPEDDAAAAAGA 643
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: A0A6H5KYY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY1_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 3.920e-92
Identity = 297/704 (42.19%), Postives = 327/704 (46.45%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIVVWGMDNAHHILNSLVVPNVVEFTVSLPWRVLLVLFPSMPXXXXXXXXXXXXXXXXXKKSGRPGGTQRTR---GKGLGSQLQHLNT--RNKSTARTISEAGRSGGRRVGADGRSPTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKAAKKDNASILVAELL----GDGIDDRAEGGKGQGTASSAAGDAADGERASPEGXXXXXXXXXXXRSFGEILRSAVTGSSEVRLRDHLFDLNTASPXXXXXXXXXXXXXXXXDPAHRQQGEGGVASASEESTPERGPSPRLPAVAGAQDGGNXXXXXXXXXXXXXXXXXXVSSRHPTRRRPTEFSEPVAVGVDVGXXXXXXXXXXXXXEIGGSASTIGGVGVRRRASAGFGDRGGVRTRAXXXXXSGGRTLMANNGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTRDGADGGXXXXXXXXXSSTAAAIADSRAKRLAEWRKKRADRARDEQAERNRRGRHE---GGXXXXXXXXXXXXXSGSGDVGGGNAVHPSVRGGGGGRLKASALPNANVLSSAPPPASNSRRFRHVERFRADMATGGHGSSYPP 2076
            MPNWLASELCMVASF+LGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTV+FER+VVWGMDNAHH+LN+LVVPNVVEF VSLPWRVLLVLFP+MP                 KK+GR  G ++ +   G G+ SQLQHLNT  + +S   T   A  +G   +    +  TP                                               D K      AS LVAELL    G G   RA+G     T      D A    +   G           RSFGEI+RS VTG+SEVRLRDHLFD +TASP       XXXXXXXXX                                        XXXXXXXXXXXXXXXXXX                      D                    +S +G  GVRRR        GG     XX     G      N SSS  XXX                                        T TR GA            SS+AAAI +SRAKRLAEWRKKR  R R+EQAE  RR  +    GG             SG G          SVR  GG      A   AN     P   S SRRFRHVERFR++MA  G G+   P
Sbjct:    1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVLFERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSSGSGSGAAKKN---KKAGRGEGLRKKQAATGGGITSQLQHLNTPTKKRSAESTPKRAASAGAPSI----QHQTP----------------------PLPERGSPSKTTPVAARNGVANAGSDSKHGGG-GASALVAELLDADVGTGAALRADGAAAIATPVPFEDDIATSPESGGSGRRGSGGRPSRRRSFGEIIRSVVTGNSEVRLRDHLFDFSTASPAPPVPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-------------------GSSRVGREGVRRR-------NGGAXXXXXXWATERGTLRERKNASSSSLXXXSAIVSAPDSSRSSATRSARTIAYRRGGAATAGVARVLPRGTGTRAGA-----GTTASPSSSSAAAIVNSRAKRLAEWRKKRVGRGREEQAEEYRRSNNNFDGGGREGNAATRGVVDGSGRGGX-----EEESVRSAGG-----XARTRANAXXXXPA-NSQSRRFRHVERFRSEMARNGFGAPQNP 632
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: A0A7S1U3F0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3F0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.460e-15
Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIVVWGMDNAHHILNS 306
            M NW+A+E   +     G W++FK+LK G  D+++L+ W ++G++   E  FE+++SW+PFYW  K L +  L  P   +  V+F+ +V+  M   H +L+ 
Sbjct:   33 MVNWIATEAVTLLCLLAGFWRSFKLLKDGIVDFSILEFWAVMGVVELAEWSFEWIISWVPFYWTFKALAMLTLCYPRSRVAGVLFDALVIPFMRFCHELLSE 134
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: A0A8K1FI23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI23_PYTOL)

HSP 1 Score: 68.9 bits (167), Expect = 7.700e-10
Identity = 42/119 (35.29%), Postives = 58/119 (48.74%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKHG------GTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIVVWGMDNAHHILNSLVVPNVVEFTV 339
            M  +L SE         GA+++ K L          T   +L+ W  LG L  FEEY EF VSWIPFY+  KC+ LGLL +P   I  V++   +   MD     +++ V+P V    V
Sbjct:    1 MSFYLISEGLTCLGMFNGAYESLKALSRAEKGIEVSTLTQILEFWIALGALTIFEEYAEFFVSWIPFYYFFKCMLLGLLLVPSTKISHVLYHGFIEPTMDKIQEQVHARVLPVVESLVV 119
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: G4YIB0_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YIB0_PHYSP)

HSP 1 Score: 64.3 bits (155), Expect = 2.360e-8
Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKH--GGTDY----NLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 258
            M  +L SE         GA+++ KVL     G D     ++L+ W +L     F++Y EF +SW PFY+L KC+ LGLL  P  + P ++FE
Sbjct:    1 MTFYLLSEGLTCVGICSGAYESLKVLSRVEKGVDTATLASVLEFWIVLAAAAIFQQYLEFFISWFPFYYLFKCILLGLLLTPSKHFPHLLFE 92
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: A0A225WDV8_9STRA (Receptor expression-enhancing protein 5-like isoform X2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDV8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.540e-8
Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKH--GGTDYNLL----KTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 258
            M  +L SE         GA+++ KVL     G D ++L    + W +L     FE+Y EF +SW PFY+L KC+ LGLL  P    P ++FE
Sbjct:    1 MTFYLLSEGLTCVGIFSGAYESLKVLSRVEKGVDTDILAAVLELWIVLAATAIFEQYIEFFISWFPFYYLFKCVLLGLLLTPTTQFPHLLFE 92
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: W2MGF6_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2MGF6_PHYPR)

HSP 1 Score: 59.3 bits (142), Expect = 1.330e-6
Identity = 33/92 (35.87%), Postives = 47/92 (51.09%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKH--GGTDYN----LLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 258
            M  +L SE         GA+++ KVL     G D +    +L+ W +L     F++Y EF +SW PFY+L KC+ LGLL  P      + FE
Sbjct:    1 MTFYLLSEGLTCVGIFSGAYESLKVLSRVEKGVDTDTLAAVLEFWIVLAAAAIFQQYIEFFISWFPFYYLFKCVVLGLLLTPNKQFTHLFFE 92
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: A0A833W9E4_PHYIN (TB2/DP1 HVA22 family protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W9E4_PHYIN)

HSP 1 Score: 58.2 bits (139), Expect = 4.040e-6
Identity = 35/119 (29.41%), Postives = 58/119 (48.74%), Query Frame = 1 
Query:    1 MPNWLASELCMVASFALGAWKTFKVLKH--GGTDYN----LLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIVVWGMDNAHHILNSLVVPNVVEFTV 339
            M  +L SE         GA+++ KVL     G D +    +L+ W +L     F++Y E  +SW PFY+L KC+ LGLL  P  +   + FE  +   +    + L++ V+P +    +
Sbjct:    1 MTFYLLSEGLTCVGIISGAYESLKVLSRVDKGVDTDTLAAVLELWIVLAAAAIFQQYIELFISWFPFYYLFKCVLLGLLLTPNKHFTHLFFEGFIHPAVVTIKYKLDTNVLPIIESLVI 119
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: A0A5D6Y973_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y973_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.030e-6
Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 1 
Query:   52 GAWKTFKVLKHG------GTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIV 267
            GA+++ KVL          T   +L+ W +L     +E+Y EF VSWIPFY+L KC  LGLL +P      V+++  V
Sbjct:   23 GAYESLKVLSRADKGVETSTLCGILEFWVVLAATAVYEQYVEFFVSWIPFYFLFKCGFLGLLLVPHTKFVHVLYDGFV 100
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BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Match: A0A8J5M210_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M210_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.200e-5
Identity = 27/80 (33.75%), Postives = 43/80 (53.75%), Query Frame = 1 
Query:  100 NLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIVVWGMDNAHHILNSLVVPNVVEFTV 339
            N LK   +L     F++Y EF +SW PFY+L KC+ LGLL  P      ++FE  +   + +  H L++ V+P +    +
Sbjct:   62 NFLKHRIVLAAAAIFQQYIEFFISWFPFYYLFKCVLLGLLLTPNKQFTHLLFEGFIRPAVVSIKHKLDTNVLPIIESLVI 141
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1335.2732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LDS5_ECTSI3.540e-9448.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYY1_9PHAE3.920e-9242.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1U3F0_9STRA4.460e-1534.31Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8K1FI23_PYTOL7.700e-1035.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4YIB0_PHYSP2.360e-836.96Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A225WDV8_9STRA7.540e-838.04Receptor expression-enhancing protein 5-like isofo... [more]
W2MGF6_PHYPR1.330e-635.87Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A833W9E4_PHYIN4.040e-629.41TB2/DP1 HVA22 family protein n=1 Tax=Phytophthora ... [more]
A0A5D6Y973_9STRA6.030e-638.46Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8J5M210_9STRA4.200e-533.75Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1335contigH-canaliculatus_F_contig1335:9460..12632 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.2
Seed ortholog evalue3.7e-86
Seed eggNOG ortholog2880.D8LDS5
EggNOG free text desc.TB2/DP1, HVA22 family
EggNOG OGs2EAKW@1,2SGUB@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionTB2/DP1/HVA22-related protein
Ec32 orthologEc-08_003160.1
Exons5
Model size2118
Cds size2118
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1335.2732.1prot_H-canaliculatus_F_contig1335.2732.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1335 9460..12632 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.1020453-CDS-H-canaliculatus_F_contig1335:9459..95221622929074.1020453-CDS-H-canaliculatus_F_contig1335:9459..9522Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 9460..9522 +
1696845669.7600877-CDS-H-canaliculatus_F_contig1335:9459..95221696845669.7600877-CDS-H-canaliculatus_F_contig1335:9459..9522Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 9460..9522 +
1622929074.1146479-CDS-H-canaliculatus_F_contig1335:9702..97981622929074.1146479-CDS-H-canaliculatus_F_contig1335:9702..9798Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 9703..9798 +
1696845669.7754443-CDS-H-canaliculatus_F_contig1335:9702..97981696845669.7754443-CDS-H-canaliculatus_F_contig1335:9702..9798Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 9703..9798 +
1622929074.1250877-CDS-H-canaliculatus_F_contig1335:10583..116181622929074.1250877-CDS-H-canaliculatus_F_contig1335:10583..11618Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 10584..11618 +
1696845669.7853496-CDS-H-canaliculatus_F_contig1335:10583..116181696845669.7853496-CDS-H-canaliculatus_F_contig1335:10583..11618Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 10584..11618 +
1622929074.1351135-CDS-H-canaliculatus_F_contig1335:11666..123431622929074.1351135-CDS-H-canaliculatus_F_contig1335:11666..12343Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 11667..12343 +
1696845669.7935863-CDS-H-canaliculatus_F_contig1335:11666..123431696845669.7935863-CDS-H-canaliculatus_F_contig1335:11666..12343Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 11667..12343 +
1622929074.147134-CDS-H-canaliculatus_F_contig1335:12385..126321622929074.147134-CDS-H-canaliculatus_F_contig1335:12385..12632Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 12386..12632 +
1696845669.8058789-CDS-H-canaliculatus_F_contig1335:12385..126321696845669.8058789-CDS-H-canaliculatus_F_contig1335:12385..12632Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 12386..12632 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1335.2732.1

>prot_H-canaliculatus_F_contig1335.2732.1 ID=prot_H-canaliculatus_F_contig1335.2732.1|Name=mRNA_H-canaliculatus_F_contig1335.2732.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=706bp
MPNWLASELCMVASFALGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEE
YFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERIVVWGMDNAHHIL
NSLVVPNVVEFTVSLPWRVLLVLFPSMPPPPPSSSSARGGGAATRKKSGR
PGGTQRTRGKGLGSQLQHLNTRNKSTARTISEAGRSGGRRVGADGRSPTP
LPTPRQPPPLPPRSPPQTPTASPAARGGAKNGGGGERRGEGDGGGVGDKK
AAKKDNASILVAELLGDGIDDRAEGGKGQGTASSAAGDAADGERASPEGG
GGRRPAARRRRSFGEILRSAVTGSSEVRLRDHLFDLNTASPPPPVAGDES
GNDGAAADPAHRQQGEGGVASASEESTPERGPSPRLPAVAGAQDGGNDKK
NGAAEGLLSSSPPPLVSSRHPTRRRPTEFSEPVAVGVDVGGGGDEAGGGG
GGGEIGGSASTIGGVGVRRRASAGFGDRGGVRTRAGVRSGSGGRTLMANN
GSSSSRASGASKASAARGRSSTATTRSTARGADASEAIAAQRGSAAASGT
DTRDGADGGGGGGGGDGASSTAAAIADSRAKRLAEWRKKRADRARDEQAE
RNRRGRHEGGGGGDGSGAGTRAASGSGDVGGGNAVHPSVRGGGGGRLKAS
ALPNANVLSSAPPPASNSRRFRHVERFRADMATGGHGSSYPPVSHPQETA
VAAIGA
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mRNA from alignment at H-canaliculatus_F_contig1335:9460..12632+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1335.2732.1 ID=mRNA_H-canaliculatus_F_contig1335.2732.1|Name=mRNA_H-canaliculatus_F_contig1335.2732.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3173bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1335:9460..12632+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCCAAACTGGTTGGCTTCAGAGCTTTGTATGGTTGCATCGTTTGCTCT
GGGAGCATGGAAGGTGAGAATCGCGATCGGAACGAATCAGCAGCAAGATG
GTGTGGTGATTCCTCGTCTCCCTTCTCTCCGGTTTCCTCCCGCGTATCAT
ACCCTCTCTGTCAACCGTTTTTTGTCAAGTATCTCAACAGATGCCCCTGC
TGCTGTGCCTGGGCTCTCTCTCTATACCGACGGCCTTAAGCAGACCTTCA
AGGTGCTCAAGCACGGTGGAACGGACTACAACCTACTGAAGACGTGGTGC
CTCCTGGGGTTGCTGCGCGCGTTCGAAGAGTACTTTGAGGTAGGCCGGAG
TCCAACGCTCTCCATCCCAGGTTGCGCTTCAGCACGCGCCTTTGGGGTGG
TTCTCTCATGTTTCGCCTTTTTTCGTGCTGTTGAGGTCACTCGTTGGATT
CTACGTCATTTTTGTCACCCCTTCGACTTCCGCGCGACCTCTACACCAGA
GAGAGAGAGAGAGACCGGATGGGAAGACATAGCCGTGGCGGCAGATCGCG
CGAGATGGTGGCTTGTCGTTTTTTTTCAACCTCCTCTTGCACGCATCCCC
GTCGGTGATCACGCAGACGAAAAGCCGTTCAGGACGTCAGCAATACGCCG
GCAGGTGCCACTCGCCCGCAACAGGAGTGAATTGGGCATCGCCTGACTAG
CTACTTCCCCCCTCACACGCCCGCCTTCATCAGCTCTGATGCTTCTTTTG
CAGCTTTTCGGAGGTTGTTTCATTGAATGGAGCCAGAGCCGATCGAAATG
CTGCGACGTGTGCACTCGATCGCTGTATAACCGCGTAGCTGCGCACCGTG
GTCTTCGGGGCGCCTAATCGCCAACGACCATACTCGAGTACCCGAGCCTC
GCCTCGTAGCTCTTGGCGAGTGCCCTAGACAAACAAGGGGCCGTGTTTCA
GCTGCTGGGCATCACCACAGTGTGCCGCTTGCCTCCTTCACGTGTTCGCG
CCACGTCTCAAGTATTTCCCTCACGCCCCAACCCCACGCACTAACCCGTC
TCCTCTTGACCCTCGTCCCCGTCTGCCCTCAAAACACGCCATCGTACCAA
CCATACACCACAACTCCAACCAAGTTTCTTGTGTCGTGGATACCTTTCTA
CTGGCTGGGCAAATGCCTGGGCCTGGGGCTGCTCTACCTCCCCGGGGGAA
ACATCCCCACCGTGGTGTTCGAGCGGATCGTGGTGTGGGGAATGGACAAC
GCGCACCACATCCTCAACAGCCTCGTCGTGCCCAACGTAGTCGAGTTCAC
CGTCTCCCTGCCCTGGCGCGTGCTGCTAGTGCTCTTCCCTTCGATGCCCC
CGCCCCCACCCTCTTCATCTTCTGCGCGGGGCGGAGGCGCGGCCACGAGG
AAAAAGAGCGGCCGCCCAGGAGGGACCCAAAGGACGAGAGGGAAAGGGCT
CGGTTCTCAGCTTCAGCACCTCAACACCCGCAACAAGAGCACCGCCAGGA
CCATATCGGAGGCGGGTCGGAGCGGGGGCAGGAGGGTGGGGGCAGACGGG
AGGTCGCCGACGCCGCTGCCGACGCCGCGACAGCCCCCTCCTCTTCCGCC
GAGAAGCCCGCCACAGACGCCAACGGCGTCGCCGGCCGCTCGCGGTGGGG
CGAAGAACGGCGGTGGCGGCGAACGAAGAGGAGAGGGCGACGGCGGTGGT
GTCGGGGATAAAAAAGCAGCCAAGAAGGACAACGCCTCGATCCTAGTGGC
AGAGCTTCTGGGCGATGGCATCGACGACCGGGCAGAAGGAGGTAAAGGGC
AGGGCACCGCTTCATCTGCTGCCGGCGATGCCGCGGACGGCGAGCGCGCT
AGCCCCGAGGGCGGGGGCGGGCGTCGTCCGGCGGCCCGGCGAAGGAGATC
GTTCGGCGAGATTTTGCGGTCGGCCGTGACGGGAAGCTCCGAGGTTCGCT
TGCGAGACCACCTGTTCGACCTTAACACCGCCTCCCCGCCCCCCCCCGTG
GCCGGGGACGAAAGCGGCAACGACGGCGCAGCGGCAGATCCGGCGCACCG
GCAGCAAGGGGAAGGAGGGGTCGCCTCAGCAAGCGAGGAGTCGACGCCGG
AAAGGGGCCCCTCTCCCAGACTGCCGGCCGTCGCCGGCGCCCAGGACGGC
GGCAACGACGTCGACGATACCGACAGCAGTAGTGAAAAAGGAGCAGCCAA
GAATAAGAAGAAGAATGGGGCGGCCGAAGGACTACTGTCTTCGTCGCCCC
CTCCGCTCGTGTCCTCGAGGCACCCGACACGTCGACGCCCGACGGAATTC
TCCGAACCCGTTGCGGTCGGCGTCGACGTCGGCGGCGGTGGCGACGAGGC
GGGCGGGGGCGGCGGTGGCGGTGAGATAGGTGGCTCTGCCAGCACCATCG
GTGGCGTGGGAGTTCGTCGGAGGGCCAGCGCTGGGTTCGGGGACAGGGGC
GGGGTGAGAACGAGGGCTGGGGTCCGATCGGGGTCGGGGGGGCGAACCCT
GATGGCGAATAACGGCTCGTCTTCCTCGCGCGCTTCTGGTGCTTCGAAGG
CGAGCGCTGCCCGTGGGAGAAGTTCCACGGCCACCACGAGAAGCACCGCA
CGGGGAGCCGATGCGTCGGAGGCCATTGCTGCCCAGCGGGGGTCTGCCGC
CGCCAGCGGTACAGACACGAGGGATGGGGCCGATGGCGGCGGCGGCGGCG
GCGGAGGTGACGGCGCCTCTTCCACAGCTGCCGCAATCGCCGATTCCCGT
GCCAAGCGGCTGGCGGAGTGGAGGAAAAAACGAGCCGACAGGGCCAGAGA
CGAACAGGCGGAGAGGAACCGAAGGGGCAGGCACGAAGGCGGTGGAGGCG
GAGACGGTTCGGGAGCGGGAACAAGAGCGGCGAGGTCAGCCTTGAATGAG
GGGCGAGCGACCACGCGATACCGGAGCGGCAGCGGTGATGTTGGCGGCGG
GAACGCCGTGCACCCGTCTGTGAGAGGCGGAGGGGGTGGAAGGCTGAAGG
CAAGCGCCCTCCCGAACGCGAACGTTCTATCTTCGGCCCCGCCTCCAGCG
TCGAACAGCCGGAGGTTCCGGCACGTGGAGAGGTTTCGCGCAGACATGGC
AACTGGAGGGCACGGCTCATCGTATCCCCCTGTGAGCCACCCGCAAGAAA
CTGCTGTTGCTGCTATCGGAGCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1335:9460..12632+

>mRNA_H-canaliculatus_F_contig1335.2732.1 ID=mRNA_H-canaliculatus_F_contig1335.2732.1|Name=mRNA_H-canaliculatus_F_contig1335.2732.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4236bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1335:9460..12632+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCCAAACTGGTTGGCTTCAGAGCTTTGTATGGTTGCATCGTTTGCTCT
GGGAGCATGGAAGATGCCAAACTGGTTGGCTTCAGAGCTTTGTATGGTTG
CATCGTTTGCTCTGGGAGCATGGAAGACCTTCAAGGTGCTCAAGCACGGT
GGAACGGACTACAACCTACTGAAGACGTGGTGCCTCCTGGGGTTGCTGCG
CGCGTTCGAAGAGTACTTTGAGACCTTCAAGGTGCTCAAGCACGGTGGAA
CGGACTACAACCTACTGAAGACGTGGTGCCTCCTGGGGTTGCTGCGCGCG
TTCGAAGAGTACTTTGAGTTTCTTGTGTCGTGGATACCTTTCTACTGGCT
GGGCAAATGCCTGGGCCTGGGGCTGCTCTACCTCCCCGGGGGAAACATCC
CCACCGTGGTGTTCGAGCGGATCGTGGTGTGGGGAATGGACAACGCGCAC
CACATCCTCAACAGCCTCGTCGTGCCCAACGTAGTCGAGTTCACCGTCTC
CCTGCCCTGGCGCGTGCTGCTAGTGCTCTTCCCTTCGATGCCCCCGCCCC
CACCCTCTTCATCTTCTGCGCGGGGCGGAGGCGCGGCCACGAGGAAAAAG
AGCGGCCGCCCAGGAGGGACCCAAAGGACGAGAGGGAAAGGGCTCGGTTC
TCAGCTTCAGCACCTCAACACCCGCAACAAGAGCACCGCCAGGACCATAT
CGGAGGCGGGTCGGAGCGGGGGCAGGAGGGTGGGGGCAGACGGGAGGTCG
CCGACGCCGCTGCCGACGCCGCGACAGCCCCCTCCTCTTCCGCCGAGAAG
CCCGCCACAGACGCCAACGGCGTCGCCGGCCGCTCGCGGTGGGGCGAAGA
ACGGCGGTGGCGGCGAACGAAGAGGAGAGGGCGACGGCGGTGGTGTCGGG
GATAAAAAAGCAGCCAAGAAGGACAACGCCTCGATCCTAGTGGCAGAGCT
TCTGGGCGATGGCATCGACGACCGGGCAGAAGGAGGTAAAGGGCAGGGCA
CCGCTTCATCTGCTGCCGGCGATGCCGCGGACGGCGAGCGCGCTAGCCCC
GAGGGCGGGGGCGGGCGTCGTCCGGCGGCCCGGCGAAGGAGATCGTTCGG
CGAGATTTTGCGGTCGGCCGTGACGGGAAGCTCCGAGGTTCGCTTGCGAG
ACCACCTGTTCGACCTTAACACCGCCTCCCCGCCCCCCCCCGTGGCCGGG
GACGAAAGCGGCAACGACGGCGCAGCGGCAGATCCGGCGCACCGGCAGCA
AGGGGAAGGAGGGGTCGCCTCAGCAAGCGAGGAGTCGACGCCGGAAAGGG
GCCCCTCTCCCAGACTGCCGGCCGTCGCCGGCGCCCAGGACGGCGGCAAC
GACTTTCTTGTGTCGTGGATACCTTTCTACTGGCTGGGCAAATGCCTGGG
CCTGGGGCTGCTCTACCTCCCCGGGGGAAACATCCCCACCGTGGTGTTCG
AGCGGATCGTGGTGTGGGGAATGGACAACGCGCACCACATCCTCAACAGC
CTCGTCGTGCCCAACGTAGTCGAGTTCACCGTCTCCCTGCCCTGGCGCGT
GCTGCTAGTGCTCTTCCCTTCGATGCCCCCGCCCCCACCCTCTTCATCTT
CTGCGCGGGGCGGAGGCGCGGCCACGAGGAAAAAGAGCGGCCGCCCAGGA
GGGACCCAAAGGACGAGAGGGAAAGGGCTCGGTTCTCAGCTTCAGCACCT
CAACACCCGCAACAAGAGCACCGCCAGGACCATATCGGAGGCGGGTCGGA
GCGGGGGCAGGAGGGTGGGGGCAGACGGGAGGTCGCCGACGCCGCTGCCG
ACGCCGCGACAGCCCCCTCCTCTTCCGCCGAGAAGCCCGCCACAGACGCC
AACGGCGTCGCCGGCCGCTCGCGGTGGGGCGAAGAACGGCGGTGGCGGCG
AACGAAGAGGAGAGGGCGACGGCGGTGGTGTCGGGGATAAAAAAGCAGCC
AAGAAGGACAACGCCTCGATCCTAGTGGCAGAGCTTCTGGGCGATGGCAT
CGACGACCGGGCAGAAGGAGGTAAAGGGCAGGGCACCGCTTCATCTGCTG
CCGGCGATGCCGCGGACGGCGAGCGCGCTAGCCCCGAGGGCGGGGGCGGG
CGTCGTCCGGCGGCCCGGCGAAGGAGATCGTTCGGCGAGATTTTGCGGTC
GGCCGTGACGGGAAGCTCCGAGGTTCGCTTGCGAGACCACCTGTTCGACC
TTAACACCGCCTCCCCGCCCCCCCCCGTGGCCGGGGACGAAAGCGGCAAC
GACGGCGCAGCGGCAGATCCGGCGCACCGGCAGCAAGGGGAAGGAGGGGT
CGCCTCAGCAAGCGAGGAGTCGACGCCGGAAAGGGGCCCCTCTCCCAGAC
TGCCGGCCGTCGCCGGCGCCCAGGACGGCGGCAACGACAAGAAGAATGGG
GCGGCCGAAGGACTACTGTCTTCGTCGCCCCCTCCGCTCGTGTCCTCGAG
GCACCCGACACGTCGACGCCCGACGGAATTCTCCGAACCCGTTGCGGTCG
GCGTCGACGTCGGCGGCGGTGGCGACGAGGCGGGCGGGGGCGGCGGTGGC
GGTGAGATAGGTGGCTCTGCCAGCACCATCGGTGGCGTGGGAGTTCGTCG
GAGGGCCAGCGCTGGGTTCGGGGACAGGGGCGGGGTGAGAACGAGGGCTG
GGGTCCGATCGGGGTCGGGGGGGCGAACCCTGATGGCGAATAACGGCTCG
TCTTCCTCGCGCGCTTCTGGTGCTTCGAAGGCGAGCGCTGCCCGTGGGAG
AAGTTCCACGGCCACCACGAGAAGCACCGCACGGGGAGCCGATGCGTCGG
AGGCCATTGCTGCCCAGCGGGGGTCTGCCGCCGCCAGCGGTACAGACACG
AGGGATGGGGCCGATGGCGGCGGCGGCGGCGGCGGAGGTGACGGCGCCTC
TTCCACAGCTGCCGCAATCGCCGATTCCCGTGCCAAGCGGCTGGCGGAGT
GGAGGAAAAAACGAGCCGACAGGGCCAGAGACGAACAGGCGGAGAGGAAC
CGAAGGGGCAGGCACGAAGGCGGTGGAGGCGGAGACGGTTCGGGAGCGGG
AACAAGAGCGGCGAGAAGAAGAATGGGGCGGCCGAAGGACTACTGTCTTC
GTCGCCCCCTCCGCTCGTGTCCTCGAGGCACCCGACACGTCGACGCCCGA
CGGAATTCTCCGAACCCGTTGCGGTCGGCGTCGACGTCGGCGGCGGTGGC
GACGAGGCGGGCGGGGGCGGCGGTGGCGGTGAGATAGGTGGCTCTGCCAG
CACCATCGGTGGCGTGGGAGTTCGTCGGAGGGCCAGCGCTGGGTTCGGGG
ACAGGGGCGGGGTGAGAACGAGGGCTGGGGTCCGATCGGGGTCGGGGGGG
CGAACCCTGATGGCGAATAACGGCTCGTCTTCCTCGCGCGCTTCTGGTGC
TTCGAAGGCGAGCGCTGCCCGTGGGAGAAGTTCCACGGCCACCACGAGAA
GCACCGCACGGGGAGCCGATGCGTCGGAGGCCATTGCTGCCCAGCGGGGG
TCTGCCGCCGCCAGCGGTACAGACACGAGGGATGGGGCCGATGGCGGCGG
CGGCGGCGGCGGAGGTGACGGCGCCTCTTCCACAGCTGCCGCAATCGCCG
ATTCCCGTGCCAAGCGGCTGGCGGAGTGGAGGAAAAAACGAGCCGACAGG
GCCAGAGACGAACAGGCGGAGAGGAACCGAAGGGGCAGGCACGAAGGCGG
TGGAGGCGGAGACGGTTCGGGAGCGGGAACAAGAGCGGCGAGCGGCAGCG
GTGATGTTGGCGGCGGGAACGCCGTGCACCCGTCTGTGAGAGGCGGAGGG
GGTGGAAGGCTGAAGGCAAGCGCCCTCCCGAACGCGAACGTTCTATCTTC
GGCCCCGCCTCCAGCGTCGAACAGCCGGAGGTTCCGGCACGTGGAGAGGT
TTCGCGCAGACATGGCAACTGGAGGGCACGGCTCATCGTATCCCCCTGTG
AGCCACCCGCAAGAAACTGCTGTTGCTGCTATCGGAGCCCGGCAGCGGTG
ATGTTGGCGGCGGGAACGCCGTGCACCCGTCTGTGAGAGGCGGAGGGGGT
GGAAGGCTGAAGGCAAGCGCCCTCCCGAACGCGAACGTTCTATCTTCGGC
CCCGCCTCCAGCGTCGAACAGCCGGAGGTTCCGGCACGTGGAGAGGTTTC
GCGCAGACATGGCAACTGGAGGGCACGGCTCATCGTATCCCCCTGTGAGC
CACCCGCAAGAAACTGCTGTTGCTGCTATCGGAGCC
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