mRNA_H-canaliculatus_F_contig13314.2708.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI) HSP 1 Score: 336 bits (861), Expect = 2.130e-104 Identity = 167/188 (88.83%), Postives = 179/188 (95.21%), Query Frame = 1
Query: 1 QRTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTIDKTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVADITHR 564
+RTS EQ+VLND+WVSVPVGSEGGGSDVAFKH+RKN HEDLLFKCEDERFELDMVIEAGSSAI+LLEPM EEIK IDKTAGARYQFK+DRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRV+RERLN+ W+ VQR+TYYKSLDRRS D+KNEDKK HS +VLVADITHR
Sbjct: 355 ERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKCEDERFELDMVIEAGSSAISLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHR 542
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE) HSP 1 Score: 240 bits (613), Expect = 5.430e-71 Identity = 122/135 (90.37%), Postives = 128/135 (94.81%), Query Frame = 1
Query: 160 MVIEAGSSAINLLEPMAEEIKTIDKTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVADITHR 564
MVIEAGSSAINLLEPM EEIK IDKTAGARYQFK+DRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRV+RERLN+ W+ VQR+TYYKSLDRRS DLKNEDKK HS +VLVADITHR
Sbjct: 1 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDLKNEDKKAHSARVLVADITHR 135
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A7S3XWL9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWL9_HETAK) HSP 1 Score: 200 bits (509), Expect = 4.560e-60 Identity = 103/193 (53.37%), Postives = 133/193 (68.91%), Query Frame = 1
Query: 1 QRTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTIDKTAGAR-----YQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVADITHR 564
+R+ E VLND WVSVPVGSE + +FKH+RKN +E+ LF+CEDERFE+DMVI++ ++A LEP+A E++ + G R Q+K+D+R LS V L AI RIYGDHGAEILELL+KNP +PVIL RL+QKD EWR AR+ LN+ W VQ ++KSLD RS K DKK S + LV ++ R
Sbjct: 100 ERSLLEHRVLNDTWVSVPVGSE---DNYSFKHMRKNQYEEALFRCEDERFEVDMVIDSNAAAAAALEPLAREVRALQAAEGTRGGERRLQYKLDKRALSVVHLNAIIRIYGDHGAEILELLKKNPAGAIPVILKRLKQKDAEWRKARQDLNKHWKEVQEKNWHKSLDHRSFYFKQADKKQCSQRALVQEVKER 289
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A7S1UGB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGB0_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.250e-54 Identity = 98/196 (50.00%), Postives = 134/196 (68.37%), Query Frame = 1
Query: 4 RTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTI-------DKTAGAR-----YQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVADI 555
R++ + VLND WVS+PVGSE + +FKH+R+N +E+ LFKCEDERFE+DMVI++ +S I +LEP+A EI+ + +TAG +Q+K+D R LS V + AI+RIYG+HGAEI ELLRKNP VPV+L RL+QKD+EWR AR+ L R W + ++KSLD RS + +DK+ S + L DI
Sbjct: 134 RSTDDGKVLNDQWVSLPVGSE---ENYSFKHMRRNTYEETLFKCEDERFEMDMVIDSNASTIRVLEPLAAEIEALRVAEGDGGETAGIAGAVPAFQYKLDPRTLSRVHINAISRIYGEHGAEIQELLRKNPAGAVPVVLNRLKQKDIEWRRARQELARQWKGLMEANFHKSLDHRSFYFRTQDKRAISIRGLTQDI 326
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A5A8E0Z5_CAFRO (HDAC_interact domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0Z5_CAFRO) HSP 1 Score: 193 bits (490), Expect = 1.590e-53 Identity = 96/185 (51.89%), Postives = 129/185 (69.73%), Query Frame = 1
Query: 1 QRTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTIDKTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVADI 555
+R EQAVLND WVS+ GSE D +FKH+R+N++ED LF+CEDER+E+DMVI+ +SAI +L+P+A+EI T+ G ++QF++DRR L + L AI R+YG+ G E+LELLRKNP VPVIL RL QKDVEW+ AR N W V + YY+SLD RS + DK+ + K LV ++
Sbjct: 469 ERAPWEQAVLNDRWVSIQTGSE----DYSFKHMRRNIYEDALFRCEDERYEVDMVIDTNASAIRILQPLAQEIHTLRAAKGFQWQFRLDRRALGVIHLKAIARVYGERGEEMLELLRKNPGGAVPVILRRLMQKDVEWKQARRVHNERWRGVMADNYYRSLDHRSFYFRQHDKRAIAAKSLVQEM 649
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA) HSP 1 Score: 191 bits (485), Expect = 7.470e-53 Identity = 104/206 (50.49%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 1 QRTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTIDKT-AGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQK--------------------DVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVADI 555
+R+ E +VLND WVSVPVGSE + FKH+RKN +E+ LF+CEDERFE+DMVI++ +S I LLEP+AEEI + + + A YQFK+D+R L V L AITRIYGD GAE+LELLRKNP VP+IL RL+QK D EWR R L+R W + TY+KSLDRRS K+ D++ + + L+A+I
Sbjct: 691 ERSYMEDSVLNDTWVSVPVGSEDSSN---FKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEI 893
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A1V9ZFI4_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFI4_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.530e-52 Identity = 97/182 (53.30%), Postives = 128/182 (70.33%), Query Frame = 1
Query: 4 RTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTIDKTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVA 549
R+ E++V ND WVSVP GSE D +FK++RKN +E+ LFKCEDERFE+DMVI+A +S I +L P+A+EI+T+ T+ +Q+ +D+ L L AITRIYG+ G +ILELLRK+P +PVIL RL+QKD EWR AR+ LN+ W V Y+KSLD S K +DKK STKV +A
Sbjct: 656 RSKMERSVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLQATSPTGWQYVLDKGALRVTHLNAITRIYGESGHQILELLRKHPAGAIPVILKRLQQKDEEWRRARQDLNKQWKEVNEKNYHKSLDHSSFYFKQKDKKATSTKVFLA 833
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A7S3HNY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNY2_9STRA) HSP 1 Score: 184 bits (467), Expect = 7.650e-52 Identity = 99/210 (47.14%), Postives = 132/210 (62.86%), Query Frame = 1
Query: 1 QRTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTID-----------------KTAGA-------RYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVADIT 558
+R+ E VLND WVS+P+GSE +FKH+RKN +E+ LFKCEDERFE+DMVI++ I +LEP+AEEI T+ +T G R+ F++++R LS + L +I RIYGDHG EILELLR+NP T+PV+L RL+QKD+EWR AR LN+ W V + +S D RS + DKK ST+ LV +IT
Sbjct: 227 ERSEEEAKVLNDQWVSIPIGSE---ESYSFKHMRKNQYEEALFKCEDERFEIDMVIDSNMCTIRVLEPLAEEIATLKSIETIPRGTLHGDAATGQTQGGASTSIAPRFSFQLEKRHLSTIHLNSIARIYGDHGEEILELLRRNPAGTIPVLLKRLKQKDLEWRKARTELNKHWREVVEKNHTRSFDHRSFYFRQHDKKYLSTRQLVTEIT 433
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: A0A067BV90_SAPPC (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BV90_SAPPC) HSP 1 Score: 187 bits (474), Expect = 1.610e-51 Identity = 97/182 (53.30%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 4 RTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTIDKTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVA 549
R+ E+AV ND WVSVP GSE D +FK++RKN +E+ LFKCEDERFE+DMVI+A +S I +L P+A+EI+T+ T+ +Q+ +D+ L L AITRIYG+ G +ILELLRK+P +PVIL RL QKD EWR AR+ LN+ W V Y+KSLD S K +DKK S K L+A
Sbjct: 305 RSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLSATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 482
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Match: T0RRZ2_SAPDV (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRZ2_SAPDV) HSP 1 Score: 186 bits (472), Expect = 4.120e-51 Identity = 97/182 (53.30%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 4 RTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFELDMVIEAGSSAINLLEPMAEEIKTIDKTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVARERLNRSWALVQRNTYYKSLDRRSHDLKNEDKKGHSTKVLVA 549
R+ E+AV ND WVSVP GSE D +FK++RKN +E+ LFKCEDERFE+DMVI+A +S I +L P+A+EI+T+ T+ +Q+ +D+ L L AITRIYG+ G +ILELLRK+P +PVIL RL QKD EWR AR+ LN+ W V Y+KSLD S K +DKK S K L+A
Sbjct: 681 RSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLAATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 858 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13314.2708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13314.2708.1 >prot_H-canaliculatus_F_contig13314.2708.1 ID=prot_H-canaliculatus_F_contig13314.2708.1|Name=mRNA_H-canaliculatus_F_contig13314.2708.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=189bp QRTSAEQAVLNDVWVSVPVGSEGGGSDVAFKHIRKNVHEDLLFKCEDERFback to top mRNA from alignment at H-canaliculatus_F_contig13314:116..2912+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13314.2708.1 ID=mRNA_H-canaliculatus_F_contig13314.2708.1|Name=mRNA_H-canaliculatus_F_contig13314.2708.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2797bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13314:116..2912+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13314:116..2912+ >mRNA_H-canaliculatus_F_contig13314.2708.1 ID=mRNA_H-canaliculatus_F_contig13314.2708.1|Name=mRNA_H-canaliculatus_F_contig13314.2708.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1134bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13314:116..2912+ (Hapterophycus canaliculatus Oshoro5f female)back to top |