mRNA_H-canaliculatus_F_contig13306.2703.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13306.2703.1
Unique NamemRNA_H-canaliculatus_F_contig13306.2703.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13306.2703.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 5.500e-131
Identity = 227/358 (63.41%), Postives = 261/358 (72.91%), Query Frame = 1 
Query:   40 MAISGVPVPALDGTVSTQEWMDFAYHAMAIDRLVYHFEGIATGFAAVTAVAAITILVYPFHALVTRIIPPANNKPTATPPATAAPTPQGRTTAGGRGRSFMVFAVAAGLPSAAVWAFAVWAERQCSWALAPALWLGLFSACVTLKITAFVASSAAAXXXXXXXXXGVPGGAAPDGD-------AAAHLLTFREYLFYVFLSPSLICEIHLMKTSARRQSRPLRAASEFFHALLGFLCGHCVVGSVLAPSLRLFFSGLLNCQHGCWLLEAGAGARWAELEAAGGAAGWPSWAAGSALLAGGAEADRG--LGPLVTLGCFLWMLVVVSSTIHFLVFYAFWHCVCLGMAELWGFPDRHLYG 1086
            MA+SGVPVPA DGTV+  EW+DFA+ +MAIDRLV+HFEG+ TGFAA+  VA+I+ILVYP H+L++    PA    TAT    AAP+  G       GR    +  A GLPSAAVWAFAVWA+R+ +W L P LWL LF ACVTLKIT+FVA+SA A   XXXXXX                  A    LTF EYLF++FLSPSL+CE+ LMK SARR+SRPLRAASEFFHA+L FLC HCVVGS+LAPSLRLFFS +       W+  A AG  WAELEAAGGA GWPSW AGSALLAGG + D G  LG LV LGCFLWML VVSS +HF+VFYAFWHC+CLGMAELWGFPDR+LYG
Sbjct:    1 MALSGVPVPAADGTVAAAEWLDFAFRSMAIDRLVHHFEGMGTGFAAMGVVASISILVYPLHSLLSPRTTPATTDNTAT----AAPSSDGG------GRPVGTYVAAVGLPSAAVWAFAVWAQRRAAWGLVPGLWLALFCACVTLKITSFVAASAVATPPXXXXXXXXXXXXXXXXXXXXXXXXAGPRSLTFGEYLFFLFLSPSLVCEVRLMKVSARRRSRPLRAASEFFHAVLTFLCAHCVVGSILAPSLRLFFSAVSPG----WVEGAAAG--WAELEAAGGA-GWPSWTAGSALLAGGDKEDSGTRLGQLVALGCFLWMLFVVSSALHFMVFYAFWHCICLGMAELWGFPDRNLYG 341
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13306.2703.1 vs. uniprot
Match: D7FQV8_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV8_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.480e-28
Identity = 130/429 (30.30%), Postives = 178/429 (41.49%), Query Frame = 1 
Query:    1 NRTAVLLLLLAVCMAISGVPVPALDGTVSTQEWMDFAYHAMAIDRLVYHFEGIATGFAAVTAVAAITILVYPFHALVTRIIPPANNKPTATPPATAAPTPQGRTTAGGRGRSFMVFAVAAGLPSAAVWAFAVWAERQCSWALAPALWLGLFSACVTLKITAFV---------ASSAAAXXXXXXXXXGV-----------------------------------PGGAAPDGDAAAHL----LTFREYLFYVFLSPSLICEIHLMKTSARRQSRPLRAASEFFHALLGFLCGHCVVGSVLAPSLRLFFSGLLNCQHGCWLLEAGAGARWAELEAAGGAAGW---PSWAAGSALLAGGAE--------------ADRGLG-PLVTLGCFLWMLVVV-SSTIHFLVFYAFWHCVCLGMAELWGFPDRHLYG 1086
             RT+ LL+++A+ +A SG       G+ S+ EW  +    M +  L  HF G+ +    +      + LVYP +    R  P A   P A P                R  S     +AA +PS AVW           W +A  L +GL  A +TLK  +FV         A+ A A         GV                                   P   A   D  AH     LTFRE+ F++ L+PSL+C    +K+ ARR  R   AASEF HA L ++  H    ++ AP+LR+    L +     W  E      WAEL    G+  W    S + GS   +GG                AD G G P +T+     + V V S  +HFL+FYAF+H VCLG AEL+G+PDR+ YG
Sbjct:   36 QRTSALLVVVAMSIAASGAD--GSGGSSSSAEWGVYLAKGMHLALLQKHFGGMVSALGCMVMGTVTSFLVYPIYQ---RCSPAAIQNPRALPCR--------------RVSSTTAKTIAAAVPSMAVWXXXXXXXXXXXWGIASGLCVGLQCAALTLKSVSFVQKARPVAAEAAIAVAAAHEDLDAAGVAENADEGDRAAAASGKLAISPARRSVLQRDPRSNSPSSTANGDDGCAHAANPALTFREFAFFLVLAPSLVCRPQYLKSGARRPPRVAAAASEFLHAGLTYVAVHVACSALFAPALRVLAEALHSGGVAGWADEED----WAELRRTDGSGWWLHDSSRSIGSLFASGGGSCVGGGVGCVPGWTFADDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYG 441
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13306.2703.1 vs. uniprot
Match: D7FQW2_ECTSI (Sterol or diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW2_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.380e-27
Identity = 98/303 (32.34%), Postives = 129/303 (42.57%), Query Frame = 1 
Query:  379 VWAFAVWAERQCSWALAPALWLGLFSACVTLKITAFVAS-----SAAAXXXXXXXXXGVPGGAAP--------DGDAAAH-LLTFREYLFYVFLSPSLICEIHLMKTSARRQSRPLRAASEFFHALLGFLCGHCVVGSVLAPSLRLFFSGLLNC--------------------------QHGC-----------WLLEAGAGARWAELEA---AGGAAGW----------PSWAAGS---ALLAGGAEADRGLGPLVTLGCFLWMLVVVSSTIHFLVFYAFWHCVCLGMAELWGFPDRHLYG 1086
            +W  AVW      W LA  L +GL SAC++LK  +F  S     +            G P G           DGD A   LLTF E+LF++  +PSL+CE   ++  ARR   P RA SEF HA+L F+  H    +  AP +R+  + + +                           +H C           W+   G    WA  E    AGG+ GW          P  AA S   +L  GGA      G           ++V S  +HF+ FY FWHCVCLG AELWG+PDR+ YG
Sbjct:  180 IWTLAVWGSVNLDWGLASGLSVGLLSACLSLKSASFAQSWCCFNAPVTTAKEAAEATGAPSGGETRSREDVCGDGDLAGPPLLTFGEFLFFILAAPSLVCEPEFLRKHARRAPCPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVVAAAVFSTPSPSLVGESAQAALASDFRGCGSGDGEHTCGGSPFNGATIGWVDCVG----WAGAEGIHTAGGSGGWFFSLLLDGGGPETAAISYFESLFCGGAGGAGLAGWWGIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYG 478
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13306.2703.1 vs. uniprot
Match: A0A6H5KXI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.880e-27
Identity = 130/429 (30.30%), Postives = 181/429 (42.19%), Query Frame = 1 
Query:    1 NRTAVLLLLLAVCMAISGVPVPALDGTVSTQEWMDFAYHAMAIDRLVYHFEGIATGFAAVTAVAAITILVYPFHALVTRIIPPANNKPTATPPATAAPTPQGRTTAGGRGRSFMVFAVAAGLPSAAVWAFAVWAERQCSWALAPALWLGLFSACVTLKITAFV-------ASSAAAXXXXXXXXXGVPGGA-APDGDAAAHL----------------------------------------LTFREYLFYVFLSPSLICEIHLMKTSARRQSRPLRAASEFFHALLGFLCGHCVVGSVLAPSLRLFFSGLLNCQHGCWLLEAGAGARWAELEAAGGAAGW---PSWAAGSALLAGGAE--------------ADRGLG-PLVTLGCFLWMLVVV-SSTIHFLVFYAFWHCVCLGMAELWGFPDRHLYG 1086
             RT+ LL+++A+ +A SG       G  ++ EW  +    M +  L  HFEGI +    +      + LVYP +    R  P A   P A PP     +   +T             +AA +PS AVWA          W +A  L +GL  A +TLK  +FV       A +A A              A A DGD AA                                          LTFRE+ F++ L+PSL+C+   + + ARR  R   AASEF HA L ++  H    ++ AP+LR+    L +     W  E      WAEL    G+  W    S + GS   +GG                +D G G P +T+     + V V S  +HFL+FYAF+H VCLG AEL+G+PDR+ YG
Sbjct:   36 QRTSALLVVVAMSIAASGGDG---SGRSNSAEWGVYLAKGMHLTLLQKHFEGIVSALGCMAMGTVTSFLVYPIYQ---RCSPAAIQNPRA-PPCRRVSSATAKT-------------IAAAVPSMAVWAXXXXXXXXXXWGVASGLCVGLQCAALTLKSVSFVQKARPVAAEAAIAVVAAHEDLDAARVAANADDGDRAAAASGQLAISPARRSVLQGDPRSNPPSPTANGDDGGARAANPALTFREFAFFLALAPSLVCQPQYLASGARRPPRVAAAASEFLHAGLTYIAVHVACSALFAPALRVLAGVLHSGGVAGWADEED----WAELRRTDGSGWWLYDSSGSLGSLFASGGGGCVHGGVGCGPGWTFSDDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYG 440
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13306.2703.1 vs. uniprot
Match: A0A6H5J9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L7_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 8.230e-20
Identity = 79/244 (32.38%), Postives = 105/244 (43.03%), Query Frame = 1 
Query:  535 GVPGGAA--------PDGDAAAHLLTFREYLFYVFLSPSLICEIHLMKTSARRQSRPLRAASEFFHALLGFLCGHCVVGSVLAPSLRLFFSGL----------------LNC-------------QHGCWLLEA-GAGARWAE---------LEAAGGAAGW----------PSWAAGS---ALLAGGAEADRGLGPLVTLGCFLWMLVVVSSTIHFLVFYAFWHCVCLGMAELWGFPDRHLYG 1086
            G PGG A         D  A   LLT  E+LF++  +PSL+CE   ++  ARR  RP RA SEF HA+L F+  H    +  AP +R+  S +                L C             ++ C  L + GA   W +         +  AG + GW             A  S   +L  GGA      G           ++V S  +HF+ FY FWHCVCLG AELWG+PDR+ YG
Sbjct:  234 GAPGGGARPREEVCRDDDRAGPPLLTLGEFLFFILAAPSLVCEQEFLRERARRAPRPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVLASAVFSPPSPSLAAESAHEALACDFRGGSSGGSGGGEYTCGGLPSIGAMIGWVDCVGWAGAEGIHTAGRSGGWFFSLLLDGGGSETAVASYFESLFCGGAGGAGLAGWWAIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYG 477
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13306.2703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUK9_ECTSI5.500e-13163.41Sterol or diacylglycerol O-acyltransferase, partia... [more]
D7FQV8_ECTSI1.480e-2830.30Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpu... [more]
D7FQW2_ECTSI2.380e-2732.34Sterol or diacylglycerol O-acyltransferase n=1 Tax... [more]
A0A6H5KXI3_9PHAE2.880e-2730.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9L7_9PHAE8.230e-2032.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13306contigH-canaliculatus_F_contig13306:82..2352 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionSterol or diacylglycerol O-acyltransferase, partial
Ec32 orthologEc-02_002850.1
Exons4
Model size1086
Cds size1086
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13306.2703.1prot_H-canaliculatus_F_contig13306.2703.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13306 82..2352 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929069.73526-CDS-H-canaliculatus_F_contig13306:81..2331622929069.73526-CDS-H-canaliculatus_F_contig13306:81..233Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 82..233 -
1696845668.046841-CDS-H-canaliculatus_F_contig13306:81..2331696845668.046841-CDS-H-canaliculatus_F_contig13306:81..233Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 82..233 -
1622929069.7480345-CDS-H-canaliculatus_F_contig13306:478..7731622929069.7480345-CDS-H-canaliculatus_F_contig13306:478..773Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 479..773 -
1696845668.0569184-CDS-H-canaliculatus_F_contig13306:478..7731696845668.0569184-CDS-H-canaliculatus_F_contig13306:478..773Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 479..773 -
1622929069.763398-CDS-H-canaliculatus_F_contig13306:1289..17491622929069.763398-CDS-H-canaliculatus_F_contig13306:1289..1749Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 1290..1749 -
1696845668.0689933-CDS-H-canaliculatus_F_contig13306:1289..17491696845668.0689933-CDS-H-canaliculatus_F_contig13306:1289..1749Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 1290..1749 -
1622929069.7745106-CDS-H-canaliculatus_F_contig13306:2173..23521622929069.7745106-CDS-H-canaliculatus_F_contig13306:2173..2352Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 2174..2352 -
1696845668.0770502-CDS-H-canaliculatus_F_contig13306:2173..23521696845668.0770502-CDS-H-canaliculatus_F_contig13306:2173..2352Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13306 2174..2352 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13306.2703.1

>prot_H-canaliculatus_F_contig13306.2703.1 ID=prot_H-canaliculatus_F_contig13306.2703.1|Name=mRNA_H-canaliculatus_F_contig13306.2703.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=362bp
NRTAVLLLLLAVCMAISGVPVPALDGTVSTQEWMDFAYHAMAIDRLVYHF
EGIATGFAAVTAVAAITILVYPFHALVTRIIPPANNKPTATPPATAAPTP
QGRTTAGGRGRSFMVFAVAAGLPSAAVWAFAVWAERQCSWALAPALWLGL
FSACVTLKITAFVASSAAASASATAAGSGVPGGAAPDGDAAAHLLTFREY
LFYVFLSPSLICEIHLMKTSARRQSRPLRAASEFFHALLGFLCGHCVVGS
VLAPSLRLFFSGLLNCQHGCWLLEAGAGARWAELEAAGGAAGWPSWAAGS
ALLAGGAEADRGLGPLVTLGCFLWMLVVVSSTIHFLVFYAFWHCVCLGMA
ELWGFPDRHLYG
back to top

mRNA from alignment at H-canaliculatus_F_contig13306:82..2352-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13306.2703.1 ID=mRNA_H-canaliculatus_F_contig13306.2703.1|Name=mRNA_H-canaliculatus_F_contig13306.2703.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2271bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13306:82..2352- (Hapterophycus canaliculatus Oshoro5f female)
AACAGGACAGCAGTGCTGCTTCTCCTCTTGGCCGTCTGCATGGCGATTTC
CGGAGTCCCCGTCCCTGCCCTTGACGGCACCGTTTCCACGCAGGAGTGGA
TGGACTTCGCATACCATGCGATGGCGATCGACAGGCTCGTGTATCACTTT
GAGGGTATCGCGACTGGCTTTGCCGCCGTGTAAGTTCACATTTGTGGGTT
TCTACTACAAAGTTGCCGTGGATGATCTTGTAGGTGGTTCCGTTTTTGGT
AGCAATAGATATCCATCGATATGCTCACATTTCGCCACGTACTCCTGCCA
ATGTGATACCGAGGTGGGAATTTCTCAGGGTATTAGGGGTTTGAGATAGG
TCACTTTTGACGTCAGCGAGGTAGAACTTGAGCTTAGATGCCTAGCCGTT
TCTTGGCCGTTGCTTTTGTTGCCGTCTCTGGAGAGAAGTCCGCTCTCTAT
CGTCCATGGGACGGAGATCGACATACACTATTGGTCACTTCTGTTGGCTT
TGAACCAGCGTCGCTGCGATGCAATCCCCTCACCCCTCCAGTGGTCCAAC
CGTACCTCACCCGCGACTCGTCCGACCGCCCCTTCCCGACCCCACCCTCA
CAGGACCGCAGTCGCTGCGATCACCATCCTGGTGTATCCATTCCACGCCC
TCGTTACGCGGATCATACCACCCGCCAACAACAAACCCACCGCAACGCCG
CCGGCCACAGCGGCACCGACACCTCAGGGTCGAACCACCGCCGGGGGCCG
CGGCCGGTCCTTCATGGTCTTCGCCGTCGCCGCAGGTCTCCCGTCGGCGG
CCGTGTGGGCTTTCGCGGTGTGGGCCGAGAGGCAGTGCTCCTGGGCGCTC
GCACCGGCGCTGTGGCTGGGGCTGTTCTCCGCTTGCGTTACTCTTAAGAT
CACGGCCTTCGTCGCCTCTTCGGCCGCAGCCTCGGCATCGGCTACCGCAG
CCGGGTCGGGGGTCCCAGGCGGGGCCGCGCCTGACGGCGATGCTGCCGCG
CACCTCCTGACGTTCCGCGAGTACCTGTTCTACGTCTTCCTCTCTCCGTC
CTTGATCTGCGAGGTACTGCTGGTGACGCTGCTTCTTCTTTGCGCGAGTT
GCAGCTCCGCATCTACGGGCGGCGCCTCAGCATTGCGTGCCCAGCCCGCT
TGACCAAGACACCAGACGTTTGAACGCAGACATGTGCTGCTATTTTGTCC
AGAAGGGGGGAGAGGCGGCGCAAAAATTGCGGAACGGGGTATATGTCCCC
GAGCTCTTCGGCGAGGCTTGCTGTTTTCCTGTTGCTGTTCCTACCGAGAC
AGCGAGTGTACACGAAAATACGCTTCAATTTCTACATGCAATGGCTATTG
TATTTAGAGCGATACCTTCATGTGGATCGGTCGGGTCTCGCTGATTTTGA
CATGGATGTGTCTATCTGGGGTAAACTCAAACGTCTACACACTTGTTTCT
ACCCAAACCAGTGCCCGCCTACCCCAACCAAGACTAGAATGCTGCAAAAC
CCGCGCGTGCATTCGCCGCCCCCTCCAAACTCCGAAATAGATAACACCAA
GGCAATGACGCCCACCCACACCCGAGCAGATTCACCTCATGAAGACCTCC
GCGAGGCGGCAGAGCCGACCCCTCCGCGCGGCCTCCGAGTTCTTTCACGC
CCTGCTGGGCTTCCTCTGTGGGCACTGCGTCGTGGGATCCGTGCTCGCCC
CGTCCCTGCGTCTTTTTTTTTCTGGGCTGCTGAACTGCCAGCACGGGTGC
TGGTTGCTGGAGGCCGGCGCAGGGGCCCGCTGGGCGGAGCTCGAGGCCGC
CGGCGGTGCGGCGGGTTGGCCGTCTTGGGCGGCTGGAAGCGCGCTGCTGG
CGGGGGGGGCCGAGGCGGACAGGGGTGAGCGAGGGTTTGTTGCTTGTTCA
TGGCTAGGGCGCCAATGCCTGGAGGTGTTGGTTTGTTGATAATGAAATTT
GTGACGGTGGCACTAGCGGCGATTTTTCATCTTTTTTGCATGTTCTCTCG
TGCTTGATGGCTGACAACATGGCAAGAAATGAGAAAAAAGTACGCCTTGC
GGCGTTTTGCAGAAGTACAGTGGTGCTGACAGAACCGACGATGACTACGA
CAACGGCAATGCATCGCAGGCCTGGGCCCGCTGGTGACTCTGGGGTGCTT
CCTGTGGATGCTGGTGGTGGTGTCCTCGACCATCCACTTCCTGGTGTTCT
ACGCCTTCTGGCATTGCGTGTGTCTCGGCATGGCGGAACTGTGGGGCTTT
CCGGACCGGCACCTCTACGGT
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13306:82..2352-

>mRNA_H-canaliculatus_F_contig13306.2703.1 ID=mRNA_H-canaliculatus_F_contig13306.2703.1|Name=mRNA_H-canaliculatus_F_contig13306.2703.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2172bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13306:82..2352- (Hapterophycus canaliculatus Oshoro5f female)
AACAGGACAGCAGTGCTGCTTCTCCTCTTGGCCGTCTGCATGGCGATTTC
CGGAGTCCCCGTCCCTGCCCTTGACGGCACCGTTTCCACGCAGGAGTGGA
TGGACTTCGCATACCATGCGATGGCGATCGACAGGCTCGTGTATCACTTT
GAGGGTATCGCGACTGGCTTTGCCGCCGTAACAGGACAGCAGTGCTGCTT
CTCCTCTTGGCCGTCTGCATGGCGATTTCCGGAGTCCCCGTCCCTGCCCT
TGACGGCACCGTTTCCACGCAGGAGTGGATGGACTTCGCATACCATGCGA
TGGCGATCGACAGGCTCGTGTATCACTTTGAGGGTATCGCGACTGGCTTT
GCCGCCGTGACCGCAGTCGCTGCGATCACCATCCTGGTGTATCCATTCCA
CGCCCTCGTTACGCGGATCATACCACCCGCCAACAACAAACCCACCGCAA
CGCCGCCGGCCACAGCGGCACCGACACCTCAGGGTCGAACCACCGCCGGG
GGCCGCGGCCGGTCCTTCATGGTCTTCGCCGTCGCCGCAGGTCTCCCGTC
GGCGGCCGTGTGGGCTTTCGCGGTGTGGGCCGAGAGGCAGTGCTCCTGGG
CGCTCGCACCGGCGCTGTGGCTGGGGCTGTTCTCCGCTTGCGTTACTCTT
AAGATCACGGCCTTCGTCGCCTCTTCGGCCGCAGCCTCGGCATCGGCTAC
CGCAGCCGGGTCGGGGGTCCCAGGCGGGGCCGCGCCTGACGGCGATGCTG
CCGCGCACCTCCTGACGTTCCGCGAGTACCTGTTCTACGTCTTCCTCTCT
CCGTCCTTGATCTGCGAGGACCGCAGTCGCTGCGATCACCATCCTGGTGT
ATCCATTCCACGCCCTCGTTACGCGGATCATACCACCCGCCAACAACAAA
CCCACCGCAACGCCGCCGGCCACAGCGGCACCGACACCTCAGGGTCGAAC
CACCGCCGGGGGCCGCGGCCGGTCCTTCATGGTCTTCGCCGTCGCCGCAG
GTCTCCCGTCGGCGGCCGTGTGGGCTTTCGCGGTGTGGGCCGAGAGGCAG
TGCTCCTGGGCGCTCGCACCGGCGCTGTGGCTGGGGCTGTTCTCCGCTTG
CGTTACTCTTAAGATCACGGCCTTCGTCGCCTCTTCGGCCGCAGCCTCGG
CATCGGCTACCGCAGCCGGGTCGGGGGTCCCAGGCGGGGCCGCGCCTGAC
GGCGATGCTGCCGCGCACCTCCTGACGTTCCGCGAGTACCTGTTCTACGT
CTTCCTCTCTCCGTCCTTGATCTGCGAGATTCACCTCATGAAGACCTCCG
CGAGGCGGCAGAGCCGACCCCTCCGCGCGGCCTCCGAGTTCTTTCACGCC
CTGCTGGGCTTCCTCTGTGGGCACTGCGTCGTGGGATCCGTGCTCGCCCC
GTCCCTGCGTCTTTTTTTTTCTGGGCTGCTGAACTGCCAGCACGGGTGCT
GGTTGCTGGAGGCCGGCGCAGGGGCCCGCTGGGCGGAGCTCGAGGCCGCC
GGCGGTGCGGCGGGTTGGCCGTCTTGGGCGGCTGGAAGCGCGCTGCTGGC
GGGGGGGGCCGAGGCGGACAGGGATTCACCTCATGAAGACCTCCGCGAGG
CGGCAGAGCCGACCCCTCCGCGCGGCCTCCGAGTTCTTTCACGCCCTGCT
GGGCTTCCTCTGTGGGCACTGCGTCGTGGGATCCGTGCTCGCCCCGTCCC
TGCGTCTTTTTTTTTCTGGGCTGCTGAACTGCCAGCACGGGTGCTGGTTG
CTGGAGGCCGGCGCAGGGGCCCGCTGGGCGGAGCTCGAGGCCGCCGGCGG
TGCGGCGGGTTGGCCGTCTTGGGCGGCTGGAAGCGCGCTGCTGGCGGGGG
GGGCCGAGGCGGACAGGGGCCTGGGCCCGCTGGTGACTCTGGGGTGCTTC
CTGTGGATGCTGGTGGTGGTGTCCTCGACCATCCACTTCCTGGTGTTCTA
CGCCTTCTGGCATTGCGTGTGTCTCGGCATGGCGGAACTGTGGGGCTTTC
CGGACCGGCACCTCTACGGTGCCTGGGCCCGCTGGTGACTCTGGGGTGCT
TCCTGTGGATGCTGGTGGTGGTGTCCTCGACCATCCACTTCCTGGTGTTC
TACGCCTTCTGGCATTGCGTGTGTCTCGGCATGGCGGAACTGTGGGGCTT
TCCGGACCGGCACCTCTACGGT
back to top