mRNA_H-canaliculatus_F_contig133.2697.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig133.2697.1
Unique NamemRNA_H-canaliculatus_F_contig133.2697.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: D8LC06_ECTSI (Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC06_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 2.150e-167
Identity = 248/301 (82.39%), Postives = 273/301 (90.70%), Query Frame = 1 
Query:  661 MATAITAPATEAVVT--DGSSREDAAAASHRLHKENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACGGMGILVKEKFDPERPPQTHASFSLKNPDEVQSFLSKLVSWA 1557
            MATA+TAPA  A+V     SSR+DAAA   RLHK+NA+E+WAKI++LMD KQVVLFLDYDGTLSPIVDQPDKAFM EGMRPVLA+AA+ FTTAIVTGRSK+KVYNFVGLDDVFYAGSHGLEIQGPL+RPV CQMAE+MRP LEA T+ LHSLL H+ GYEIEDNKFSLSVHYRQV S  HV+E+H IVH YV  APEIVVKAGKKVLELRPKVDW+KGSAVNWILDALDLG+R+DVFPIYLGDDITDEDAFVAMETRACGGMGILVKEKFDPERPP+T+ASFSL+NPDEVQ+FL+ LVS A
Sbjct:    1 MATAMTAPAAGAMVEGRSSSSRDDAAA---RLHKDNAIEHWAKIKSLMDKKQVVLFLDYDGTLSPIVDQPDKAFMKEGMRPVLAQAASVFTTAIVTGRSKDKVYNFVGLDDVFYAGSHGLEIQGPLDRPVKCQMAEDMRPMLEATTDTLHSLLGHIQGYEIEDNKFSLSVHYRQVPSPPHVEELHNIVHEYVATAPEIVVKAGKKVLELRPKVDWHKGSAVNWILDALDLGNRSDVFPIYLGDDITDEDAFVAMETRACGGMGILVKEKFDPERPPETNASFSLRNPDEVQTFLATLVSHA 298
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: A0A7S2D2V7_9STRA (Trehalose 6-phosphate phosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D2V7_9STRA)

HSP 1 Score: 300 bits (768), Expect = 7.860e-94
Identity = 151/262 (57.63%), Postives = 193/262 (73.66%), Query Frame = 1 
Query:  754 KENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLS-HVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACGGMGILVKEKFDPERPPQTHASFSLKNPDEVQSFL 1536
            K+NA++ W +I+  M  K+ V+FLDYDGTLSPIV +PD+AFM + MRPVL K A+ FTTAIVTGRS+EKVY FV LDDV+YAGSHG +I GPL+ P++CQ+A+  RP L+   E     ++  + G EIEDNKF+LSVHYR V S E + EVH  V+ Y+ D   + ++ GK VLE+RPKV WNKGSAV WIL AL L    DVFP+YLGDD+TDEDAF+A+ +    G+GILV+E+ D ER   T A++ L+NPDEVQ FL
Sbjct:   90 KKNALDQWQQIRESMAGKRPVVFLDYDGTLSPIVKEPDRAFMKDTMRPVLQKVASMFTTAIVTGRSREKVYQFVQLDDVYYAGSHGFDISGPLKHPISCQVADGFRPLLKRAVEDFEETIAKRIQGAEIEDNKFALSVHYRNV-SPELIPEVHAAVNAYIADESSLELRHGKMVLEVRPKVSWNKGSAVVWILKALGLDQSEDVFPLYLGDDMTDEDAFLALRSMNNSGIGILVREQGDKERVAGTAANYLLRNPDEVQEFL 350
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: A0A7S2WT46_9STRA (Trehalose 6-phosphate phosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT46_9STRA)

HSP 1 Score: 291 bits (745), Expect = 2.150e-90
Identity = 154/273 (56.41%), Postives = 190/273 (69.60%), Query Frame = 1 
Query:  760 NAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPL-ERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACGG---------MGILVKEKFDPERPPQTHASFSLKNPDEVQSFLSKLV 1548
            NA+E W  I + M  K+ V+FLDYDGTLSPIV +PD A M +GMR VL + +AA+TTAI+TGRS+EKVY FV LDDV+YAGSHG +I GP  +  +TCQ+ +  RP LE   + L   LS +PG ++EDNKF+LSVHYR V   ++V+ V +IV   VE  P++ +K GKKVLELRPKVDWNKGSAV WI+  L L    D+FP YLGDDITDEDAFVA+                 GILV+E  D ER P+THASF L+NPDEVQ FL  L+
Sbjct:  108 NAIEAWQNICSSMHGKRPVVFLDYDGTLSPIVKEPDNAHMKDGMRSVLRRVSAAYTTAIITGRSREKVYQFVQLDDVYYAGSHGFDISGPDGDGSITCQVGDQFRPLLEDVRQQLEDQLSAIPGTKVEDNKFALSVHYRNVPD-QYVELVFEIVSALVERQPDLALKHGKKVLELRPKVDWNKGSAVLWIMRQLGLDTAEDIFPFYLGDDITDEDAFVALHAFGPSSPQLGDVGRSAGILVREDNDLERQPETHASFKLRNPDEVQQFLELLL 379
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: A0A8K1CGA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGA6_PYTOL)

HSP 1 Score: 251 bits (640), Expect = 1.440e-75
Identity = 140/287 (48.78%), Postives = 187/287 (65.16%), Query Frame = 1 
Query:  748 LHKENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACG-GMGILVKEKFDPERP-----------PQTHASFSLKNPDEVQSFLSKLVSWADEAAA 1572
            +H  NA  +   I+  +  K+ V+FLDYDGTLSPIVD PD+AFM + MR  L   ++ + T IVTGRS EKVY+FV LD++ YAGSHG +I+GP   P+ CQ+ ++ RP LE C   L + ++H+PG E+EDN  ++SVHYR VA  E   EV  IV  Y+   P +V K GKKV ELRP+VDW+KG AV +IL  L L D  +V P YLGDD++DEDAF A+ +R+ G G+ I+V+   DPE             P T A++SL++  EV+ FL  LVS  +EAAA
Sbjct:   37 VHPTNAFRDLESIRRTVAGKKPVVFLDYDGTLSPIVDIPDRAFMTDEMRHALNTLSSKYITTIVTGRSTEKVYDFVQLDNLVYAGSHGFDIKGPKTLPINCQVGDHFRPMLEQCVRDLSAAIAHIPGAEMEDNHLAVSVHYRHVAM-EFQAEVEDIVDDYIIQHPSLVKKHGKKVFELRPRVDWDKGRAVMYILSELGL-DAENVVPFYLGDDVSDEDAFSALNSRSIGKGISIIVR---DPEATNADIPGNLKQLPATKAAYSLRDTIEVEQFLKVLVSLEEEAAA 318
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: A0A662WPT2_9STRA (Trehalose 6-phosphate phosphatase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPT2_9STRA)

HSP 1 Score: 238 bits (607), Expect = 3.500e-71
Identity = 138/283 (48.76%), Postives = 178/283 (62.90%), Query Frame = 1 
Query:  748 LHKENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDE-----VHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACG-GMGILVKEKFDPERP-----------PQTHASFSLKNPDEVQSFLSKL 1545
            LH  NA  +   I+  +  K+ V+FLDYDGTLSPIVD PD+AFM + MR  L++ ++ F TAIVTGRS EKVYNFV LD++ YAGSHG +I+G   RP+ CQ+A++ RPTLE     L    +H+ G E+EDN  ++S+HYR      HVD      V +IV  YV   P +  K GK V ELRP+VDW+KG AV +IL  L L D  DV P YLGDD++DEDAF A+  R  G G+ I+V+   DPE             P T AS+SL++  EVQ FL+ L
Sbjct:    2 LHPTNAFLDMEAIRQKVAGKRPVVFLDYDGTLSPIVDVPDRAFMTDAMRAALSELSSKFVTAIVTGRSTEKVYNFVQLDNLVYAGSHGFDIKGTKSRPINCQVADHYRPTLEQALRDLTEQTAHIRGAELEDNGLAISIHYR------HVDPTLQGAVEQIVDDYVSFHPSLTKKLGKMVFELRPRVDWDKGRAVMFILAELGL-DAEDVVPFYLGDDVSDEDAFNALNGRGLGQGISIIVR---DPEAVKVDLPGNMKELPATKASYSLRDTFEVQQFLTVL 274
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: A0A3F2RS21_9STRA (Trehalose 6-phosphate phosphatase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RS21_9STRA)

HSP 1 Score: 245 bits (626), Expect = 5.390e-71
Identity = 140/280 (50.00%), Postives = 179/280 (63.93%), Query Frame = 1 
Query:  748 LHKENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACG-GMGILVKEKFDPERP-----------PQTHASFSLKNPDEVQSFLSKLVS 1551
            LH  NA  +   I+  +  K+ V+FLDYDGTLSPIVD PD AFM + MR  L++ ++ F TAIVTGRS EKVYNFV LD++ YAGSHG +I+G   RP+ CQ+A++ RP LE     L  L +H+ G E+EDN  +LSVHYR V  A   + V +IV  YV   P +  K GK V ELRP+VDW+KG AV +IL  L L D  DV P YLGDD++DEDAF A+  R  G G+ I+V+   DPE             P T AS+SL++  EVQ FL++L S
Sbjct:    2 LHPTNAFRDMEAIRQKVAGKRPVVFLDYDGTLSPIVDVPDHAFMTDAMRAALSELSSKFVTAIVTGRSTEKVYNFVQLDNLVYAGSHGFDIKGTKTRPINCQVADHFRPELEQALIGLKELTAHIAGAELEDNGLALSVHYRHVDPALQ-NAVEQIVDDYVAYHPSLTKKMGKMVFELRPRVDWDKGRAVMYILAELGL-DAEDVVPFYLGDDVSDEDAFNALNGRGIGQGVSIIVR---DPEADKVDLPGNLKELPATKASYSLRDTSEVQQFLTELAS 276
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: A0A2P4Y0S3_9STRA (Trehalose 6-phosphate phosphatase n=18 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y0S3_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.030e-69
Identity = 132/259 (50.97%), Postives = 170/259 (65.64%), Query Frame = 1 
Query:  805 KQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACG-GMGILVKEKFDPERP-----------PQTHASFSLKNPDEVQSFLSKL 1545
            K+ V+FLDYDGTLSPIVD PD AFM + MR  L++ ++ F TAIVTGRS EKVYNFV LD++ YAGSHG +I+G   RP+ CQ+A++ RP LE     L    +H+ G E+EDN  ++SVHYR V SA   + V +IV  YV   P +  K GK V E+RP+VDW+KG AV +IL  L L D  DV P YLGDD++DEDAF A+  R  G G+ I+V+   DPE             P T AS+SL++  EVQ FL++L
Sbjct:   12 KRPVVFLDYDGTLSPIVDVPDHAFMTDAMRAALSELSSKFVTAIVTGRSTEKVYNFVQLDNLVYAGSHGFDIKGTKTRPINCQVADHFRPKLEQALRDLTEQTAHIAGAELEDNGLAISVHYRHVDSALQ-NAVEQIVDDYVAYHPSLTKKMGKMVFEVRPRVDWDKGRAVMYILSELGL-DAEDVVPFYLGDDVSDEDAFNALNGRGLGQGISIIVR---DPEAEKVDLPGNLKELPVTKASYSLRDTAEVQQFLTEL 265
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: A0A2D4CD42_PYTIN (Trehalose 6-phosphate phosphatase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD42_PYTIN)

HSP 1 Score: 240 bits (613), Expect = 1.870e-69
Identity = 130/263 (49.43%), Postives = 178/263 (67.68%), Query Frame = 1 
Query:  751 HKENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACG-GMGILVK--EKFDPERP------PQTHASFSLKN 1512
            H  NA ++   I+  +  K+ V+FLDYDGTLSPIVD PD+AFM E MR  L   ++ + TAIVTGRS EKVYNFV LD++ YAGSHG +I+GP   P++C++A++ RP L  C   L + ++H+PG E+EDN+ ++SVHYR V  +   D V  IV  YV + P++V K GKKV ELRP+VDW+KG AV +IL  L L D  +V P YLGDD++DEDAF A+ +R  G G+ I+V+  E  + + P      P T AS+SL++
Sbjct:    3 HPTNAFQDLESIRRAVAGKRPVVFLDYDGTLSPIVDVPDRAFMTEEMRRALNALSSKYVTAIVTGRSTEKVYNFVQLDNLVYAGSHGFDIKGPKSLPISCRIADDFRPMLADCLRDLSARIAHIPGAEMEDNRLAVSVHYRHVPMSRQAD-VEDIVDAYVAEHPKLVKKHGKKVFELRPRVDWDKGRAVMYILAELGL-DAENVVPFYLGDDVSDEDAFNALNSRPIGRGISIIVRDPEAVNVDLPGNATELPVTKASYSLRD 263
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: K3WM19_GLOUD (Trehalose 6-phosphate phosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM19_GLOUD)

HSP 1 Score: 240 bits (613), Expect = 4.290e-69
Identity = 140/279 (50.18%), Postives = 177/279 (63.44%), Query Frame = 1 
Query:  745 RLHKENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACG-GMGILVKEKFDPERP-----------PQTHASFSLKNPDEVQSFLSKL 1545
            +LH  NA  +   I+ L+  KQ V+FLDYDGTLSPIVD PD AFM   MR  L   ++ F TAIVTGRS EKVYNFV LD++ YAGSHG +I+G    P++CQ+ +++RP LE C   L   L+ +PG EIEDN+ ++SVHYR VA A     V  IV  YV   P +  K GKKV ELRP+VDWNKG AV +IL  L L D   V P YLGDD++DEDAF A+  R  G G+ I+V+   DPE             P T A++SL++  EV+ FL+ L
Sbjct:    2 QLHPTNAFRDIDTIRQLVAGKQPVVFLDYDGTLSPIVDVPDHAFMTGAMRDALHALSSKFITAIVTGRSTEKVYNFVQLDNLVYAGSHGFDIKGTKSLPISCQVGDHLRPALEDCIRDLSVKLAEIPGAEIEDNRLAVSVHYRHVAPALQ-SVVEGIVDDYVVHHPSLAKKHGKKVFELRPQVDWNKGRAVLFILSQLGL-DAEHVVPFYLGDDVSDEDAFNALNARGNGKGVSIIVR---DPEAVKVDLPGGTNELPATTAAYSLRDTLEVEQFLNVL 275
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Match: H3GW55_PHYRM (Trehalose 6-phosphate phosphatase n=2 Tax=Phytophthora TaxID=4783 RepID=H3GW55_PHYRM)

HSP 1 Score: 241 bits (615), Expect = 9.770e-69
Identity = 141/287 (49.13%), Postives = 181/287 (63.07%), Query Frame = 1 
Query:  748 LHKENAMENWAKIQALMDNKQVVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEKVYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSLLSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKAGKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFVAMETRACG-GMGILVKEKFDPERP-----------PQTHASFSLKNPDEVQSFLSKLVSWADEAAA 1572
            LH  NA  +   I+  +  K+ V+FLDYDGTLSPIVD PD AFM + MR  L++ ++ F TAIVTGRS EKVYNFV LD++ YAGSHG +I+G   RP+ CQ+A++ RP LE     L    SH+ G E+EDN  ++SVHYR V  A   + V +IV  YV+  P +  K GK V ELRP+VDW+KG AV +IL  L L D  DV P YLGDD++DEDAF A+  R  G G+ I+V+   DPE             P T AS+SL++  EVQ FL++L     E AA
Sbjct:   59 LHPTNAFLDMDAIRQKVAGKRPVVFLDYDGTLSPIVDVPDHAFMTDAMRAALSELSSKFVTAIVTGRSTEKVYNFVQLDNLVYAGSHGFDIKGTKTRPINCQVADHFRPELEQALLDLTEQTSHIAGAELEDNGLAISVHYRHVDPALQ-NAVEQIVDDYVDYHPSLTKKMGKMVFELRPRVDWDKGRAVMYILSELGL-DAEDVVPFYLGDDVSDEDAFNALNGRGLGQGISIIVR---DPEAEKVDLPGNLKELPVTKASYSLRDTAEVQQFLTELARLKHEFAA 340
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig133.2697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC06_ECTSI2.150e-16782.39Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarp... [more]
A0A7S2D2V7_9STRA7.860e-9457.63Trehalose 6-phosphate phosphatase n=1 Tax=Dictyoch... [more]
A0A7S2WT46_9STRA2.150e-9056.41Trehalose 6-phosphate phosphatase n=1 Tax=Rhizochr... [more]
A0A8K1CGA6_PYTOL1.440e-7548.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WPT2_9STRA3.500e-7148.76Trehalose 6-phosphate phosphatase n=2 Tax=Nothophy... [more]
A0A3F2RS21_9STRA5.390e-7150.00Trehalose 6-phosphate phosphatase n=1 Tax=Phytopht... [more]
A0A2P4Y0S3_9STRA1.030e-6950.97Trehalose 6-phosphate phosphatase n=18 Tax=Phytoph... [more]
A0A2D4CD42_PYTIN1.870e-6949.43Trehalose 6-phosphate phosphatase n=2 Tax=Pythium ... [more]
K3WM19_GLOUD4.290e-6950.18Trehalose 6-phosphate phosphatase n=1 Tax=Globispo... [more]
H3GW55_PHYRM9.770e-6949.13Trehalose 6-phosphate phosphatase n=2 Tax=Phytopht... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig133contigH-canaliculatus_F_contig133:37636..44448 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.6
Seed ortholog evalue6.2e-62
Seed eggNOG ortholog4792.ETI51662
Preferred nameTPS1
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K00697,ko:K01087,ko:K03937,ko:K16055
KEGG TC3.D.1.6
KEGG ReactionR02737,R02778
KEGG Pathwayko00190,ko00500,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map00500,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143
GOsGO:0000003,GO:0000287,GO:0000302,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0003825,GO:0004553,GO:0004805,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0005946,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0007049,GO:0007154,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009266,GO:0009269,GO:0009311,GO:0009312,GO:0009405,GO:0009408,GO:0009409,GO:0009414,GO:0009415,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0015927,GO:0016020,GO:0016051,GO:0016311,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0019203,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030447,GO:0031668,GO:0031974,GO:0031981,GO:0032502,GO:0032505,GO:0032991,GO:0033554,GO:0034293,GO:0034599,GO:0034605,GO:0034614,GO:0034637,GO:0035251,GO:0035690,GO:0036168,GO:0036180,GO:0040007,GO:0042221,GO:0042493,GO:0042542,GO:0042578,GO:0042631,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043934,GO:0043935,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046351,GO:0046527,GO:0046677,GO:0046686,GO:0046872,GO:0048468,GO:0048646,GO:0048831,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050896,GO:0051239,GO:0051321,GO:0051704,GO:0051716,GO:0060688,GO:0065007,GO:0070013,GO:0070301,GO:0070413,GO:0070414,GO:0070415,GO:0070417,GO:0070887,GO:0071214,GO:0071229,GO:0071236,GO:0071462,GO:0071465,GO:0071496,GO:0071704,GO:0071944,GO:0090441,GO:0097237,GO:0104004,GO:1900618,GO:1901576,GO:1901700,GO:1901701,GO:1902494,GO:1903046,GO:1905428,GO:1990234,GO:2000026,GO:2000032
EggNOG free text desc.Removes the phosphate from trehalose 6-phosphate to produce free trehalose
EggNOG OGs3QBSY@4776,COG1877@1,KOG1050@2759
EC2.4.1.15,2.4.1.347,3.1.3.12
COG Functional cat.G
CAZyGT20
BiGG ReactioniRC1080.CRv4_Au5_s12_g3028_t1
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons7
Model size1605
Cds size945
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig133.2697.1prot_H-canaliculatus_F_contig133.2697.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig133 38296..44448 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929067.8293085-UTR-H-canaliculatus_F_contig133:37635..382951622929067.8293085-UTR-H-canaliculatus_F_contig133:37635..38295Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 37636..38295 +
1696845667.5582488-UTR-H-canaliculatus_F_contig133:37635..382951696845667.5582488-UTR-H-canaliculatus_F_contig133:37635..38295Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 37636..38295 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929067.8538606-CDS-H-canaliculatus_F_contig133:38295..384451622929067.8538606-CDS-H-canaliculatus_F_contig133:38295..38445Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 38296..38445 +
1696845667.5719502-CDS-H-canaliculatus_F_contig133:38295..384451696845667.5719502-CDS-H-canaliculatus_F_contig133:38295..38445Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 38296..38445 +
1622929067.8705752-CDS-H-canaliculatus_F_contig133:40673..407721622929067.8705752-CDS-H-canaliculatus_F_contig133:40673..40772Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 40674..40772 +
1696845667.5803103-CDS-H-canaliculatus_F_contig133:40673..407721696845667.5803103-CDS-H-canaliculatus_F_contig133:40673..40772Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 40674..40772 +
1622929067.8884387-CDS-H-canaliculatus_F_contig133:41080..412241622929067.8884387-CDS-H-canaliculatus_F_contig133:41080..41224Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 41081..41224 +
1696845667.5900133-CDS-H-canaliculatus_F_contig133:41080..412241696845667.5900133-CDS-H-canaliculatus_F_contig133:41080..41224Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 41081..41224 +
1622929067.9035244-CDS-H-canaliculatus_F_contig133:42287..423831622929067.9035244-CDS-H-canaliculatus_F_contig133:42287..42383Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 42288..42383 +
1696845667.6008136-CDS-H-canaliculatus_F_contig133:42287..423831696845667.6008136-CDS-H-canaliculatus_F_contig133:42287..42383Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 42288..42383 +
1622929067.919298-CDS-H-canaliculatus_F_contig133:43055..431751622929067.919298-CDS-H-canaliculatus_F_contig133:43055..43175Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 43056..43175 +
1696845667.6120765-CDS-H-canaliculatus_F_contig133:43055..431751696845667.6120765-CDS-H-canaliculatus_F_contig133:43055..43175Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 43056..43175 +
1622929067.935813-CDS-H-canaliculatus_F_contig133:43528..436831622929067.935813-CDS-H-canaliculatus_F_contig133:43528..43683Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 43529..43683 +
1696845667.6258223-CDS-H-canaliculatus_F_contig133:43528..436831696845667.6258223-CDS-H-canaliculatus_F_contig133:43528..43683Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 43529..43683 +
1622929067.951272-CDS-H-canaliculatus_F_contig133:44267..444481622929067.951272-CDS-H-canaliculatus_F_contig133:44267..44448Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 44268..44448 +
1696845667.636689-CDS-H-canaliculatus_F_contig133:44267..444481696845667.636689-CDS-H-canaliculatus_F_contig133:44267..44448Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 44268..44448 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig133.2697.1

>prot_H-canaliculatus_F_contig133.2697.1 ID=prot_H-canaliculatus_F_contig133.2697.1|Name=mRNA_H-canaliculatus_F_contig133.2697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=315bp
MATAITAPATEAVVTDGSSREDAAAASHRLHKENAMENWAKIQALMDNKQ
VVLFLDYDGTLSPIVDQPDKAFMNEGMRPVLAKAAAAFTTAIVTGRSKEK
VYNFVGLDDVFYAGSHGLEIQGPLERPVTCQMAENMRPTLEACTEALHSL
LSHVPGYEIEDNKFSLSVHYRQVASAEHVDEVHKIVHGYVEDAPEIVVKA
GKKVLELRPKVDWNKGSAVNWILDALDLGDRADVFPIYLGDDITDEDAFV
AMETRACGGMGILVKEKFDPERPPQTHASFSLKNPDEVQSFLSKLVSWAD
EAAAKAAAASAATS*
back to top

mRNA from alignment at H-canaliculatus_F_contig133:37636..44448+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig133.2697.1 ID=mRNA_H-canaliculatus_F_contig133.2697.1|Name=mRNA_H-canaliculatus_F_contig133.2697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6813bp|location=Sequence derived from alignment at H-canaliculatus_F_contig133:37636..44448+ (Hapterophycus canaliculatus Oshoro5f female)
CATATGTAGAGCGCAGAGAGTCCACGCGTGCCGACGCTGCTGGGTTGTAT
AATCTGGATAAAGACAAAATTGTCCCTGGTATTAATTGTGCGTGCTTTCG
TCTTCTTCGATCGCCGAACCCAACTTTTGGTAGCACAACTGAAAGGAAAA
CAAGGGAGAGTAAGAACCTGTCACATTCGACGTCGCACGCAGGCGATACC
ATTCCTCGGTGCTGTTGCTGTTGGAAGATGTGAACATTCGATTCCGCCGC
CCCTTTCGGAAAATGCAAGATGCAAGATGTGAAACATGATGTGTCCTCCC
CGACGTCGGATAGCGGAAGAAATCGGTTACACGTTTTGATCAATTGCGCC
GCATGAGGACTTCCGCGAAAAAAGAGAGAACTTGAGGCTTTTGACAGCCA
ACCACATAGCATTGGGGCCTAGACCACAACCTTTCGGCAGCACAAGAACA
CCTGGTGCCCCTTCTCTCTCCTGCTCTCTGTGGAAGTAGGCCCCGTTTTT
CACCTTCGTTGAAGAGGGAGGAGAGCGTGCCTTGCAGTCGAAGCGGAGAG
TCGACCAAGCAGCGACCTTTCTGCGTAGAGAGCGGACAGCGGACATCCAA
AAGGTACCACGATCTGGAAGTAGACAGGAAGGGCTTCCGCCGACAGGCAC
GCAAACGATCATGGCGACGGCGATCACCGCTCCAGCGACAGAAGCTGTGG
TGACTGACGGGAGCAGCAGAGAAGACGCTGCTGCCGCTTCCCACCGTCTG
CATAAGGAAAATGCCATGGAGAACTGGGCGAAAATCCAAGCGCTCATGGA
CAACAAACAGGTGCGGGTTATGTGTGACAAGAGAACTCTCACCAAACCTC
TCTTCTGCAGTTTTCAGACAAAGACTACACTTGTAGCAGGGCAAGTTCTT
CTTCCGTGCGACGGCGGCGGCGTTTTATCCGGTTCCTACGCGCGGACGCT
GTAGCGTTGGTTGTTGGGAAGGGAGCAGTCAGCGCACCCAACCCCGACCA
GCGTATTCGCACACCAAGCCTTCTGATTTCCAGCAGTCGGCCTTTTCCCT
GAGCGGAACGCTCTACAGATCGCACCAGAGGCGGAGCCTCGGCGGCCCCT
TTGTCCGCGCTAGAGCGGAAGCCGTGCACACATAGGGGGATGGAAACACT
TGCAGATGCAGCCACCCGCACCTTGATGAAACACGTCGCCAAGTAACCAC
GGGCGAGGGGTCGGCCTGAGATTAGGAGTCGATTTCCTTGTGTCAAACTC
TTTGTCTACTTCGGCTCTCTTCGTATGAAATCAGTCCCTTCCCCGCTTCT
CGGAATTGCAACAGCAGCGCTGTCGTGAAGTTGTGTACGGACTCCGTGAA
GGCGGAGAAGAAAAAGAGAGAGAACTCCTGCTGGCCAGGCTTACACCCCG
CCGACTATTGTTCGACGGTGCCTAGTATTGAGGGGCCTCTCTCTGCTTGC
GCTATATATTTCATGGGCTGCCTATCCTCCCGCTTTTGGACGCCCCGGCA
TGCGTTATTCTGGTGTGTGAAATATTAGCGAGCGCGACCCTGTAGACACA
ACACTTTACCGAGAAGTCACCCAATCCTCCGACATCTTTGGTTCTCAAAC
AGGCACAGGGTGTATGCATGTTGCGAGCAGCGAAGAACGTTCTTCATATC
CAACCGTTTCCGGCTCTCGGCAGGCGAGAATCCTTTTCCGCCCCCCAAAA
GGAAAGATATCCATGCCTCCCGATTCTTTCGTTTTTTTGTTTTTTGAAGT
TTGAAGGTATCGGGATCCAACGACGGCGGGTCGGGTTCTCGTACGTTCGA
GGACACACACGCAGACGCAACGCCCGCAGGCATACCCCGACGCCGTCGCG
AACAAGAGAGCAAGCAGTCGGCGGGCAATTGGCGGTGTCGAATCAATTCT
AAAGCAGCAGCAGCAGCAGCGGTAGAAGTTGGAAAAGGAGCTCTTATTTC
GAGTTGTTGTCCTCCAACATCCTAGCAGGTTGTGATATAATACTCGTACT
CACACTCGACGAGCAAACGCAGATGCACGTTTCCTCAGGGGCGTACACCC
TGAGCGTAGAATGTGCGGGCAAAACCACACGCACGAGAAAACGACCAAGC
AATCGAAGCTTCACTGATCGCCCCCCAATACGCGATGCCCCGCACATGCA
CGTACGAGGCATCGAGCACGGTCCAAGAAAGAACATGAGGGGGTCGTCAC
CACGCTCGTTGGTCCATGCGACCGTTGTGGGGCATCACACAGCGGGATCG
TGGAACGTCCTGAAACCTGAAACCTTTGCCTCTCTCACGGGAAAACAATC
CGATGGGCGGGAAAACAAAGCATTGCCCCGATCATCCAATCATTAATCGA
CTGACCTTTTTATGTCTCCTTGGGGACGTCTTCGGCGCTCGACGATGGGG
AACCCGCCTAATGTTTGCCGTGGGTGGCAGGACCCCGGCGCGTGAGCTTC
GGTAAAGCATCAGCCACCAAAAACGGCACGGATTGGCGCCGCACCCCACC
GCCACGGCACGCTAAAAAATAGCCGGGGGAAAAGGCCGTTGCGCAACCCG
TCCTTCTCGTCCGCTCCCTCCGTGCCAACCCCCCACCCGTTTTAATGTGT
GTACGGCAGTGCACAGCCCTTTCAAAACTCCCCTCACACCGTGTCTCTCG
TCTCGCGTTTTCATCTTTAACTTTCGTTTTCTTGCGGTTGTCCGACGGGC
CGTCGGGGCAGATCGAGTCACGCGCAAGGGGCGCCCAGAAACAAAAGGTC
TCGTTTCCGTAGCTGCACTTCGATGCTAACGTGGCCGCGGAAGCAAGGCG
TCCTGAGCCGGTTAAGATTCGCACGAAGCGCTGTGGTTATTGGTGCGGTG
CCTGGAGGCTGAACGGTTTTGTATGCGAATACAGCAAGGAGCAACAGCTA
CACGTATGATTCTAAACATCGAAGGTAGCTGGAGCAACGAACAACGCCAC
AGCAGTGAGGACCGCGGCGAAACCGACGGCAATGCCGGCAGCAGCCCCAA
CCCAACCCTGCCGACGACGCCCCACTGCTTCCATCCAGGTGGTGCTCTTC
CTCGACTACGACGGGACGTTGTCGCCCATCGTGGACCAGCCGGACAAGGC
GTTCATGAACGAGGGGATGCGGCCGGTGCTCGCTAAGGTGAGAGCCACAG
ACGCCCCGCCGAACGAGAAGCATCGATTTTGCGGAGCTCGGCCCCGAGTG
TAGGGGCGCAGAGACCCTTGTCGTGCACTGGCTGGCAGGAAAGAGATGCA
CCCCGCCGCGAGCCATCGAACCCGCGTTGCGGAGCTTCAACCGAAAGTGG
CCGATGACTTGTAGCGACGATTGCGACGACATCCGCCACTCCCTTGCCCC
TTGCCATGCTTCGCTCCGCCGTCCCCCCTCGCCAATCCATCCTAACTCCC
GCGTTGCCACCTTCCCACCGCTTGTTGCTCGTCGCCATGAAAAAGGCGGC
CGCCGCGTTCACGACGGCGATCGTGACGGGGCGCAGCAAGGAGAAAGTTT
ACAACTTCGTCGGGCTTGACGATGTCTTCTACGCGGGCAGCCATGGGCTC
GAAATCCAAGGCCCTTTGGAGCGGCCGGTCACGTGTCAGGTGCGAAGACG
GTGATCTCTCCGCCTCCGCAGAAACAAGCTCCGCTCCTTTTTTGTTTCCC
CTCTTGCCGTTCCTCTTTTGCGCCGGAGGAGTTACGCTCGAGCGTTCGTT
TGGTCAATCCGGGGTTTGTTGCTCCTCGTCGCCGCAGAAGGCAATTGTGT
CTTCCGCGATTGACCCGGCACATGGCCAGCGGGCTCGAAAGCAAGCGAGG
CATGCGGAGTTGTGCGGATGGCCAGCGGGCTCGACAGCAGGGCATGCGGA
GTTGTGCGGCCGGAGGACGGGACGGTTCGAGAAGTAGGACAGCAGTAAGA
ACAACAGGAACGCCACCAACAGCAGCTGCAAAAACAACACCAACTCACTG
CCAACAGCAGCAATACCACAAATCGTCGCCAGCAGCAACAGTAAACAGTA
ATGTGCGGAGGCCCGGTCGTCTTTTGTCAAATACACTGGGGCCAGTCAAA
CGTCCACTTTCGCCACCACAGAGAGTGTTGTTCTCCCGACGCGAAATAAG
ACAGGCGTATCGGTATGTCAAGGGGATCTGCTTTTCTTGACCTTTGCAAA
TATTACAAGTACAGTATATGACAGCGAGAATCGTTGTTGTGGAAATGTGC
TTAGGCTGAGCTGTCTCGTCAAGATGCTGTTCGCCAATCGCTTCGGTACC
TACGAAAAAACGAGCAAGTTAAGGAGTCGAGCGCAAAAACTATGGTAGCT
CGTGGGCTCGTTTCAGTCAGATTTATTTGTGATCGCTTTGGAACACATCG
AGAGGAAGGGACAGCCCGGATGCGGGGCAGAGAACGTCGGGACACGCACA
CACACATGCTCCGACGCAGCTGCCTCGGAGGTGTTACCGCTTTACCCTCA
TGTGCATCCCGCACTCTGCCAGCTGCTTTTCGTGGCTGCTTTGCCCGGCG
TGCACGCTTCTTGCTTCCTGTGTGGTAAAGTACAGGGGGCGCAAAATCGC
ACAACAAGACGTGTTGAAAAGGGAGAAGTAGTGCAGACTCTAAAAAACAG
AAAACGCCGTGGTTTGTGTTGTGTTTGTGCGATGTCTGCGTTGTTTGGTC
AGATGGCGGAGAACATGAGGCCAACTCTCGAAGCCTGCACGGAGGCGCTT
CATTCCTTACTCAGCCACGTACCGGGGTACGAAATCGAGGACAACAAGGT
CAGTCGGTCGCCTTCTTGCCTCCCACGCCTGCCAACCACCTGCCGGGCGA
TCACATGAGCGTGTCAGGACAGCAGCGCACTTTCCAAAGCTGTTCCGAAA
AATTGTGCGGATTTTTTTTTCTCCAGAGGCTCGTGTCTTTGTAATTCGTT
GGTTTACGAATTCTTGCTCTTGAGGAATACAGCGTCTTGTGGCCACGATA
GTCGTCTCTTACAGGTTGGCGCAGGCTGGGCACCATTTCTACGGTGATGT
ACAAATATTGGTTCTGTTTTGGTCTGTTCCTCTTGGAGCCGGGAAATCGA
CCCGCTATCCTTCGTGGACAAGAATCACGATCCAACAACAGCAATGGCAT
CAAGCCGAGGCCGCCGTCGTGTGGACCATTAGAGGCATCCTGCCGCAATC
GAGGCGTCCTCCGTTGTCCTGCATGTCAACCTTTTTTGTCGATCGTTTTC
CATCGCGGATTATTTTATTTGAGCCCACTTTGAATTCCCAATGGCCTCCT
TCTCTTCTCTCATCTCTTCATTGGACGGCACCGTAAATCATCCCGGAGTA
GATGCCCCGCATCCCGCCTTTCGTCCACGTCTCAACGCAACCCCTCCTCC
CGCGACCCGCAATTCATGGCGCGGAAACTGCTTGACCGCACGTATCTATT
GCTGCGCGCTCTCGAGACAGTTCTCTCTGAGCGTCCACTATCGCCAGGTC
GCCTCCGCGGAACATGTGGACGAGGTCCACAAGATTGTCCACGGCTACGT
GGAAGACGCGCCGGAGATCGTGGTCAAGGCCGGGAAGAAGGTGAGAGTAC
TGCTGTGCATCGGGCCGCGTTGCCCCCGTCTCTTTAGTGTCTTTTTTATT
CCGTTTCGTGAACGTAGTTTGCTCGGGTTGTTGGAGAGAGGCACGTGCGT
TATGCGCCCCGTATGCAAAGCGTTCGGGAAATAGAGCTCGGTCGATGGGA
GAAGCTTCCGTACCTGAGTGTGGCGTTTGCCGATCGAAAGGATGCTTGCT
TCGACGACTGCATCAAATGAGATCGACCTTAGATGTTCGTCGGCGGTCGT
AATCGAGAGTTGAGTGGTCGAGACCTGGAGCGGACAACGAAACGGGTTTG
CCCGCCTCCCCTCTCCCCTGGTGTGACACTTTTTTCGTTCCAGGTGTTGG
AACTCCGCCCTAAGGTGGACTGGAATAAGGGTAGCGCCGTCAACTGGATC
TTGGATGCGTTGGACTTGGGCGATAGGGCCGACGTATTCCCGATCTACCT
GGGGGATGACATCACGGACGAGGACGCCTTCGTCGCGATGGAAACCCGGT
GCGCTGGGTCTGGAGTCGCACAACTCGATCGTTGCTTGTTCGCACAGAAA
AACACGAAGTTTCTTGTCTCATCTCCATTTCGATGCGCCTTCGCAGACAT
TGGCAAGCGATGCTGGACGGGCTCCCATGTCAAGACAAGCGGGATCGATT
AAACACACGAGTATATTCAGAAGGGGTGGCTAGCGCCCCGAGCAACAGAA
GAACCCGGCAGGTAGACACTCGCCAATCGCCACAAGCTGCCCGTAGAGAG
CCGAGAGCAGAGGCGCAGACGCAAAAATAAAGCACGGCACGACTGTCAGA
GAGCTAATTGCTTGGCACTGAGCTCGGAAAACGCCCCGCGTAAGAGTTGC
GTTGGGAGTCATGTCTCGACAGACGCAACCGACAAAAAGCAGACGATCCG
CGAGCCCATGCACAGCTCTCACGCCGCGGTCGTAACCTCCCAAGGTAGAC
AGCAGCACGATCGAAGAGGGGAAGCCGTGCGGCATGAGGGTGTTCCAGTC
GCCTCTTGACTCCTGAGTGGCACAACGCTTTTCGCCCTCACCTTTTCTCT
CGCTTCGGCTTTCGCCACGACCATGACCGCAGGGCCTGCGGAGGCATGGG
CATCCTGGTGAAGGAGAAGTTCGACCCCGAGCGCCCCCCACAGACGCACG
CCTCGTTCTCCCTCAAGAACCCCGACGAGGTCCAGTCCTTCTTGTCGAAG
CTGGTGTCGTGGGCTGATGAGGCCGCGGCCAAGGCTGCCGCGGCGAGCGC
GGCAACGTCATGA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig133:37636..44448+

>mRNA_H-canaliculatus_F_contig133.2697.1 ID=mRNA_H-canaliculatus_F_contig133.2697.1|Name=mRNA_H-canaliculatus_F_contig133.2697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1890bp|location=Sequence derived from alignment at H-canaliculatus_F_contig133:37636..44448+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGACGGCGATCACCGCTCCAGCGACAGAAGCTGTGGTGACTGACGG
GAGCAGCAGAGAAGACGCTGCTGCCGCTTCCCACCGTCTGCATAAGGAAA
ATGCCATGGAGAACTGGGCGAAAATCCAAGCGCTCATGGACAACAAACAG
ATGGCGACGGCGATCACCGCTCCAGCGACAGAAGCTGTGGTGACTGACGG
GAGCAGCAGAGAAGACGCTGCTGCCGCTTCCCACCGTCTGCATAAGGAAA
ATGCCATGGAGAACTGGGCGAAAATCCAAGCGCTCATGGACAACAAACAG
GTGGTGCTCTTCCTCGACTACGACGGGACGTTGTCGCCCATCGTGGACCA
GCCGGACAAGGCGTTCATGAACGAGGGGATGCGGCCGGTGCTCGCTAAGG
TGGTGCTCTTCCTCGACTACGACGGGACGTTGTCGCCCATCGTGGACCAG
CCGGACAAGGCGTTCATGAACGAGGGGATGCGGCCGGTGCTCGCTAAGGC
GGCCGCCGCGTTCACGACGGCGATCGTGACGGGGCGCAGCAAGGAGAAAG
TTTACAACTTCGTCGGGCTTGACGATGTCTTCTACGCGGGCAGCCATGGG
CTCGAAATCCAAGGCCCTTTGGAGCGGCCGGTCACGTGTCAGGCGGCCGC
CGCGTTCACGACGGCGATCGTGACGGGGCGCAGCAAGGAGAAAGTTTACA
ACTTCGTCGGGCTTGACGATGTCTTCTACGCGGGCAGCCATGGGCTCGAA
ATCCAAGGCCCTTTGGAGCGGCCGGTCACGTGTCAGATGGCGGAGAACAT
GAGGCCAACTCTCGAAGCCTGCACGGAGGCGCTTCATTCCTTACTCAGCC
ACGTACCGGGGTACGAAATCGAGGACAACAAGATGGCGGAGAACATGAGG
CCAACTCTCGAAGCCTGCACGGAGGCGCTTCATTCCTTACTCAGCCACGT
ACCGGGGTACGAAATCGAGGACAACAAGTTCTCTCTGAGCGTCCACTATC
GCCAGGTCGCCTCCGCGGAACATGTGGACGAGGTCCACAAGATTGTCCAC
GGCTACGTGGAAGACGCGCCGGAGATCGTGGTCAAGGCCGGGAAGAAGTT
CTCTCTGAGCGTCCACTATCGCCAGGTCGCCTCCGCGGAACATGTGGACG
AGGTCCACAAGATTGTCCACGGCTACGTGGAAGACGCGCCGGAGATCGTG
GTCAAGGCCGGGAAGAAGGTGTTGGAACTCCGCCCTAAGGTGGACTGGAA
TAAGGGTAGCGCCGTCAACTGGATCTTGGATGCGTTGGACTTGGGCGATA
GGGCCGACGTATTCCCGATCTACCTGGGGGATGACATCACGGACGAGGAC
GCCTTCGTCGCGATGGAAACCCGGTGTTGGAACTCCGCCCTAAGGTGGAC
TGGAATAAGGGTAGCGCCGTCAACTGGATCTTGGATGCGTTGGACTTGGG
CGATAGGGCCGACGTATTCCCGATCTACCTGGGGGATGACATCACGGACG
AGGACGCCTTCGTCGCGATGGAAACCCGGGCCTGCGGAGGCATGGGCATC
CTGGTGAAGGAGAAGTTCGACCCCGAGCGCCCCCCACAGACGCACGCCTC
GTTCTCCCTCAAGAACCCCGACGAGGTCCAGTCCTTCTTGTCGAAGCTGG
TGTCGTGGGCTGATGAGGCCGCGGCCAAGGCTGCCGCGGCGAGCGCGGCA
ACGTCATGAGGCCTGCGGAGGCATGGGCATCCTGGTGAAGGAGAAGTTCG
ACCCCGAGCGCCCCCCACAGACGCACGCCTCGTTCTCCCTCAAGAACCCC
GACGAGGTCCAGTCCTTCTTGTCGAAGCTGGTGTCGTGGGCTGATGAGGC
CGCGGCCAAGGCTGCCGCGGCGAGCGCGGCAACGTCATGA
back to top