mRNA_H-canaliculatus_F_contig13297.2692.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13297.2692.1
Unique NamemRNA_H-canaliculatus_F_contig13297.2692.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: D7G717_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G717_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 7.910e-117
Identity = 169/203 (83.25%), Postives = 189/203 (93.10%), Query Frame = 1
Query:    1 RRMTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLVSTGAKKSR 609
            R++TE+ LEANLAVNYLGNFLLTTQLLPLLK+SPDGRVLCVNSSLHKK EAFRFEDPMF+++Y+MFKAYANSKLALLMFAEELQ RLNREKSTVIVNSANPGIVMT ISRDMGWF+R G+E+FKP L LF K P AGAFTSV+A TTP+LRKS+EDGAPGVGGLY+SDCAP AFNPAV+VDK+RKDLWKLSE+ VS G+KK+R
Sbjct:  212 RKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKKPEAFRFEDPMFDRDYNMFKAYANSKLALLMFAEELQQRLNREKSTVIVNSANPGIVMTGISRDMGWFLRVGHEVFKPFLKLFLKHPKAGAFTSVFAATTPQLRKSTEDGAPGVGGLYMSDCAPQAFNPAVAVDKSRKDLWKLSEEWVSAGSKKNR 414          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: A0A6H5J7F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F6_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.940e-53
Identity = 113/243 (46.50%), Postives = 136/243 (55.97%), Query Frame = 1
Query:    1 RRMTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAE--------------AFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREK-----------STVIVNSANP---------------------------------------GIVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVS 537
            R++TE+ LEANLAVNYLGNFLLTTQLLPLLK+SPDGRVLCVNSSLHKK                A   +  + E   +M       K    + AE ++H  +               T+I+N  +                                        GIVMT+ISRDMGWF+R G+E+FKP L LF K P AGAFTSV+A TTP+LRK +EDGAPGVGGLY+SDCAP AFNPAV+
Sbjct:  184 RKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKKVVILGDTCDAASIVPLAMGADVVVHEATNTMLPPLDQGKTYADVEAEAIKHGHSTPMMAAAFAQRVGAKTLILNHFSARYRGDPSDASVAAMLRIERQAARAGGLERHQGWDFLETCGIVMTNISRDMGWFLRVGHEVFKPFLKLFLKHPKAGAFTSVFAATTPQLRKGTEDGAPGVGGLYMSDCAPQAFNPAVT 426          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: A0A835YQM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM3_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.530e-46
Identity = 92/200 (46.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:    1 RRMTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLVSTGAK 600
            R +TED  E   AVN+L +FLL  +LLPL+++S +GR++ + S+LHK  +AF F+D   E+ YSMFKAY+ SKLA +MF  EL  RL  + S V+VN  +PG+V++DIS++M  +MR   EL +P+L L  K P  GA+TSVY  T+P LR+  +DG+  + G Y  D  P     A   +  R+ LW LSE L   GAK
Sbjct:  221 RTVTEDGFETTFAVNHLAHFLLARELLPLVERSAEGRIVILTSALHKSVKAFDFDDVQTEQRYSMFKAYSKSKLANVMFGIELHKRLQEQGSKVMVNMVHPGMVLSDISKNMRMYMRVLEELVRPILVLLRKLPVHGAYTSVYVATSPDLRR--DDGS-AISGQYFFDSYPQMVAEAARYNDDRERLWTLSEQLC--GAK 415          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: W7U8G8_9STRA (Short-chain dehydrogenase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8G8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.140e-36
Identity = 86/222 (38.74%), Postives = 121/222 (54.50%), Query Frame = 1
Query:    1 RRMTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKN-YSMFKAYANSKLALLMFAEELQHRLNREKST---------------------VIVNSANPGIVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKD-LWKLSEDLVSTGA 597
            RR+T + LEA LA N+ G+FLLT  L P L+K  DGRV+ V+SSLHK   AF F+DP++E + YS+F AY  SKLA ++F  ELQ RL   +S                      V  N+ +PG V T+++R+M W++  G  +  P+L  F K P  GA+TSV+  T+P LR        G+GG +  +C       AV+ D +    LW +SE+     A
Sbjct:  219 RRLTSEGLEATLATNHFGHFLLTLLLFPELEKVSDGRVVNVSSSLHKVPRAFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLEVLQSNEANKVGRKGERGGGDLAVRRVVTANAVHPGNVQTEVARNMPWYLYWGQRICSPILWCFSKNPAQGAYTSVHVATSPALR--------GIGGKFFVNCDVTGDVSAVARDPSVAGRLWAMSEEACGLTA 432          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: A0A8B7KZ54_DROEL (retinol dehydrogenase 14-like n=1 Tax=Drosophila elegans TaxID=30023 RepID=A0A8B7KZ54_DROEL)

HSP 1 Score: 127 bits (318), Expect = 6.450e-33
Identity = 79/196 (40.31%), Postives = 108/196 (55.10%), Query Frame = 1
Query:    1 RRMTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFM-RAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLV 585
            + +T+D  E  L VN++G+FLLT  LL +LKKS   R++ ++S  H +  A    D   EK+Y   +AY+ SKLA ++F  EL  RL  E S V VN+ +PG+V T++ R+M +F       L KP+     K P +GA TS+YA   P+L+K        V GLY SDC P    PA   D   K LW  SE L 
Sbjct:   24 KMLTKDGFEMQLGVNHIGHFLLTNLLLDVLKKSAPSRIVVLSSLAHTQG-AINLADLNSEKSYDEGRAYSQSKLANVLFTRELAKRL--EGSGVTVNALHPGLVDTELGRNMAFFQTNLAKYLIKPLFWPLLKTPKSGAQTSIYAALDPELKK--------VSGLYFSDCKPKDAAPAALDDAVGKLLWTESEKLT 208          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: UPI001CFBE409 (retinol dehydrogenase 12-like isoform X1 n=2 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBE409)

HSP 1 Score: 122 bits (306), Expect = 2.250e-30
Identity = 76/192 (39.58%), Postives = 108/192 (56.25%), Query Frame = 1
Query:   10 TEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLV 585
            T D  E    VN+LG+ LLT  LL L+K+S   R++ V+S  H      +F+D   EKNYS  KAYA SKLA ++F +EL  RL  E S V V + +PG+V T++SR +   ++ G +L +P    F K P  GA T++Y +  P+L K +        GLY SDCA  + + A S +   K LW +S  L+
Sbjct:  117 TADGFEMQFGVNHLGHVLLTHLLLDLIKRSTPARIVNVSSKAHTMG-TIQFDDLNSEKNYSPLKAYAQSKLANILFTKELAKRL--EGSGVTVYALHPGVVRTELSRHLSSTLQIGMKLLQP----FTKSPVEGAQTTIYCSVAPELEKET--------GLYYSDCAATSCSRAASDEDVAKRLWGVSCQLL 293          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: UPI001C0816B2 (retinol dehydrogenase 11-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C0816B2)

HSP 1 Score: 122 bits (306), Expect = 4.120e-30
Identity = 76/192 (39.58%), Postives = 104/192 (54.17%), Query Frame = 1
Query:   10 TEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLV 585
            TED  E    VN+LG+FLLT  LL LLKKS   RV+ V+S  H+K +   F+D   +K+Y+  K+Y  SKLA ++F++EL  RL  E + V V S +PG++ T++ R +   +     LF   L LF K P  GA TS+Y      L+ +S        GLY SDCAP    P      A   LW +S  +V
Sbjct:  145 TEDGFEMQFGVNHLGHFLLTNSLLDLLKKSAPSRVVNVSSLAHEKGK-IHFDDINLDKDYNPMKSYRQSKLANVLFSQELAKRL--EGTGVTVYSLHPGVIRTELGRHLWPTIALWKRLFFQPLILFIKSPWEGAQTSIYCAVDESLQNTS--------GLYYSDCAPKQAAPQACDAAAATKLWDISASMV 325          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: UPI001F036D3E (retinol dehydrogenase 14-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F036D3E)

HSP 1 Score: 122 bits (305), Expect = 4.300e-30
Identity = 80/196 (40.82%), Postives = 105/196 (53.57%), Query Frame = 1
Query:   10 TEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFMRAGNELFK----PVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLV 585
            +ED  E   AVN+LG+FLLT  L+  L KS   R++ V+SSLHK   +  FED   +KNY+  +AYA SKLA L+FA    H L R    V VN+ +PGIV T+++R   ++      LFK    P+L L  K P  GA TS+Y  T P L         GV G+Y  DC      P    D   K LW++SE + 
Sbjct:  131 SEDGFELQFAVNHLGHFLLTNLLMDTLAKSKPSRIIIVSSSLHKYG-SIDFEDLNGDKNYNPRRAYAQSKLANLLFA----HELKRLPQGVTVNTVHPGIVFTELARYTTFYT-----LFKYLAYPLLLLILKTPWQGAQTSIYCATEPTLE--------GVSGMYFGDCKKNDCAPHARDDGKAKKLWEISEKMT 308          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: B3MHR9_DROAN (Uncharacterized protein n=3 Tax=ananassae subgroup TaxID=32347 RepID=B3MHR9_DROAN)

HSP 1 Score: 121 bits (303), Expect = 1.200e-29
Identity = 79/193 (40.93%), Postives = 108/193 (55.96%), Query Frame = 1
Query:    1 RRMTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFMRAGNELF-KPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSE 576
            R +T D +E  L VN++G+FLLTTQLL +LKKS   R++ V+S  H + E     D   +K+Y   KAY+ SKLA ++F  EL  RL  E + V VN+ +PG+V T+I R MG+F      LF KP+   F K P  GA T++Y    P+L+K        V G Y SDC      PA    +  K LW +S+
Sbjct:  139 RSLTTDGIELQLGVNHMGHFLLTTQLLDMLKKSAPSRIVNVSSLAHTRGE-INTGDLNSDKSYDEGKAYSQSKLANVLFTRELARRL--EGTGVTVNALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWPFVKTPKNGAQTTLYVALDPELKK--------VTGQYFSDCKIKEVAPAALDVQTAKWLWAVSD 320          
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Match: A0A6P4IFK9_DROKI (retinol dehydrogenase 12-like n=1 Tax=Drosophila kikkawai TaxID=30033 RepID=A0A6P4IFK9_DROKI)

HSP 1 Score: 120 bits (300), Expect = 1.550e-29
Identity = 77/199 (38.69%), Postives = 109/199 (54.77%), Query Frame = 1
Query:    1 RRMTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAFRFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPGIVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRKSSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLVSTGA 597
            R +T+D +E    VN++G+FLLT  LL +LKK+   R++ V+S+LH K  +    D   +K+YS   AY  SKLA ++F  EL  RL  E + V VNS +PG+V T+I R++  F +A   +  P+   F K   +GA TS+YA   P L+ +S        GLY SDC     + A   DK  K +W  SE     GA
Sbjct:  108 RSLTKDGIELQFGVNHVGHFLLTHLLLDVLKKTAPSRIVVVSSALHAKG-SINVNDLNSKKSYSKTGAYHQSKLANILFTRELAKRL--EGTGVTVNSLHPGVVDTEIWRNLNGFTKA---MTSPLRWAFFKTAKSGAQTSLYAALDPDLKNAS--------GLYFSDCKAKKVSKAAKDDKMAKFVWAESEKWTGVGA 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13297.2692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G717_ECTSI7.910e-11783.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7F6_9PHAE1.940e-5346.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQM3_9STRA1.530e-4646.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U8G8_9STRA2.140e-3638.74Short-chain dehydrogenase n=4 Tax=Monodopsidaceae ... [more]
A0A8B7KZ54_DROEL6.450e-3340.31retinol dehydrogenase 14-like n=1 Tax=Drosophila e... [more]
UPI001CFBE4092.250e-3039.58retinol dehydrogenase 12-like isoform X1 n=2 Tax=P... [more]
UPI001C0816B24.120e-3039.58retinol dehydrogenase 11-like n=1 Tax=Alosa sapidi... [more]
UPI001F036D3E4.300e-3040.82retinol dehydrogenase 14-like n=1 Tax=Xenia sp. Ca... [more]
B3MHR9_DROAN1.200e-2940.93Uncharacterized protein n=3 Tax=ananassae subgroup... [more]
A0A6P4IFK9_DROKI1.550e-2938.69retinol dehydrogenase 12-like n=1 Tax=Drosophila k... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13297contigH-canaliculatus_F_contig13297:268..2886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.4
Seed ortholog evalue3.7e-92
Seed eggNOG ortholog2880.D7G717
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size612
Cds size606
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13297.2692.1prot_H-canaliculatus_F_contig13297.2692.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13297 274..2886 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929066.8787305-UTR-H-canaliculatus_F_contig13297:267..2731622929066.8787305-UTR-H-canaliculatus_F_contig13297:267..273Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13297 268..273 +
1696845667.1202476-UTR-H-canaliculatus_F_contig13297:267..2731696845667.1202476-UTR-H-canaliculatus_F_contig13297:267..273Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13297 268..273 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929066.8953788-CDS-H-canaliculatus_F_contig13297:273..4111622929066.8953788-CDS-H-canaliculatus_F_contig13297:273..411Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 274..411 +
1696845667.1358933-CDS-H-canaliculatus_F_contig13297:273..4111696845667.1358933-CDS-H-canaliculatus_F_contig13297:273..411Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 274..411 +
1622929066.9114053-CDS-H-canaliculatus_F_contig13297:764..9241622929066.9114053-CDS-H-canaliculatus_F_contig13297:764..924Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 765..924 +
1696845667.1448028-CDS-H-canaliculatus_F_contig13297:764..9241696845667.1448028-CDS-H-canaliculatus_F_contig13297:764..924Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 765..924 +
1622929066.9264307-CDS-H-canaliculatus_F_contig13297:1497..16151622929066.9264307-CDS-H-canaliculatus_F_contig13297:1497..1615Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 1498..1615 +
1696845667.1534958-CDS-H-canaliculatus_F_contig13297:1497..16151696845667.1534958-CDS-H-canaliculatus_F_contig13297:1497..1615Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 1498..1615 +
1622929066.9483948-CDS-H-canaliculatus_F_contig13297:2033..21471622929066.9483948-CDS-H-canaliculatus_F_contig13297:2033..2147Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 2034..2147 +
1696845667.1616876-CDS-H-canaliculatus_F_contig13297:2033..21471696845667.1616876-CDS-H-canaliculatus_F_contig13297:2033..2147Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 2034..2147 +
1622929066.9654424-CDS-H-canaliculatus_F_contig13297:2810..28861622929066.9654424-CDS-H-canaliculatus_F_contig13297:2810..2886Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 2811..2886 +
1696845667.1699271-CDS-H-canaliculatus_F_contig13297:2810..28861696845667.1699271-CDS-H-canaliculatus_F_contig13297:2810..2886Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13297 2811..2886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13297.2692.1

>prot_H-canaliculatus_F_contig13297.2692.1 ID=prot_H-canaliculatus_F_contig13297.2692.1|Name=mRNA_H-canaliculatus_F_contig13297.2692.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=202bp
MTEDRLEANLAVNYLGNFLLTTQLLPLLKKSPDGRVLCVNSSLHKKAEAF
RFEDPMFEKNYSMFKAYANSKLALLMFAEELQHRLNREKSTVIVNSANPG
IVMTDISRDMGWFMRAGNELFKPVLNLFCKQPNAGAFTSVYATTTPKLRK
SSEDGAPGVGGLYISDCAPAAFNPAVSVDKARKDLWKLSEDLVSTGAKKS
R*
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mRNA from alignment at H-canaliculatus_F_contig13297:268..2886+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13297.2692.1 ID=mRNA_H-canaliculatus_F_contig13297.2692.1|Name=mRNA_H-canaliculatus_F_contig13297.2692.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2619bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13297:268..2886+ (Hapterophycus canaliculatus Oshoro5f female)
CGAAGGATGACGGAGGATCGGCTCGAGGCCAACCTGGCCGTGAACTACCT CGGAAACTTCTTGCTGACGACACAGCTGCTGCCCCTCCTCAAGAAGTCGC CCGACGGGAGAGTGCTGTGCGTCAACTCGAGCCTTCACAAGAAGGTGGGC TTATGTGGGTGTGCGTGAGCAGCAGCAGTGGGTGGGTAGATGGGGGGGTG GCGGCGGGGGTGGACTTGGGGATGTTGTTCTTCGTGCGGAAGCTGCTGCT ACTGCTGCTTTGCCGGATGGTGCCACCAAGGACCCTCTACTATCGGTCAT CTTCGTTTCGCGCACGACCTTCCGTGCCCCGTTGTGCGCCCCGCCTCTCG CCTCCCGCCGCGTAGCAGCACCTTCACGTTCAACGGAACGCATGCCCATG CCTAACGAAAGCCTTCGTGCATGCCCCGTTTTCTTGCCACATGTTCGGGC GCTTTGTCTACGACGGGGTGATTGTCGATCCCTCCGAACGAGATTAGGCC GAAGCCTTCCGATTCGAGGACCCCATGTTTGAGAAGAACTACAGCATGTT CAAGGCCTACGCGAACAGCAAGCTGGCTCTGCTCATGTTCGCCGAGGAGC TGCAGCACCGCCTCAACAGGGAGAAATCCACCGTCATCGTCAACAGCGCA AACCCAGGTGTGGAAATGCACGAGCGCTAGGGTGTGGGGTGTGTGCGATC ATATGATCATATATAGAAGTACATGATATGCCACGACAAGAAGACGGTAG ACATCTCCTGGCTTCCAAGCGGGCTTATCGTAGTCTCGAAGTTTGGTTTT AGGGCTTTTCGGTGTGGTTGGAGGCGCCCGTCGTGGGGCTGCAGCTAGAA AGAGGGTGTTCCAAAGGAAAACGGTTGTCTTCAACTCGGTTTCGGCACTT ATTGGTGGCTGTGCGCGCTGGTTTCGTGCTGCGCTTGTTGTTGACTCCGC GACGGAGTTATGCGTTAGGGTATGGTCCAAGATAGGTCGCGATGGGCGTG CATGATCAGCGATCACTGCCTCGGGGGTGAATCGGTGGGCCCAAACGGTG GCAAGGAGATGCTTGTGTTGTTGTTGTTGTTGTTGCTGTTGTGGTCCTTG TCGTTCTCATCGGCGTCGACTCATTTCCAGCATCGGCGAGGTCGCGAAGC AACTTTTGGTGAGCGCTCGCGTGTTGATACGACCCGTCGCCGCCGCCGCT GCTGCTGTTAATGCGCCCTTCTTCCGACAGGCATTGTAATGACCGATATC TCGCGGGACATGGGGTGGTTCATGCGAGCAGGGAATGAGCTGTTCAAGCC GGTCTTGAACCTTTTCTGCAAGCAGCCAAATGCGGGCGCATTCACCAGGT TTGTCCCCACGAACGGCAACTAAAAAATTGCAGACTCGATCGCGCATGGC GTGCAACTCCCGAGCTCTGTCCGCCAGTACCACCTGCACTACGCTACTCT TTCCTTTCTCCAAGCATGCACGAGCCGAGGCGTATTTCGACCCGAAAACT GCTTGAACTGTGCGACTTGTGGAGCATTGGTCCGTCCACGACAAGATGCT GCCGACGCCGCGCTGGGTGCTAGTGCGTGGTTGGGTCATTCCAAGCAGTT TTCAGACCGATCATTCTCTCTCTCTCCCGAAGGTTGTCAGGAGGACGACC GCCAGCAGCAGCAGCAGCAGCAGCAAAGCAACCGCAAGAACCACAGCAGC AACAACTCAGGGGCAGCAGCACGAGCAATCATGACCCCTGCCACTTTTCC CTTGTCTGTGTCCCAGCGTGTATGCGACAACGACGCCCAAGCTGCGCAAG AGCAGCGAAGATGGAGCGCCGGGCGTGGGTGGCCTGTACATCTCGGACTG CGCGCCGGCAGCGTTCAACCCGGCTGTTTCGTGAGTTGTCGTTGGCTCGC CGGAGGGCAGGGTATGGGCTTGTGCCGTCGATGCTGTGCTCCGACGTGAG AGTTGTCCCTTGTCGGAGGGAGGGAGTTCCTATTGTGTTTTCTGTCCGCG ACAAATCTGGCGCATCTTTGATGTGGGGTTCGAGCCTGCCTGCTGCCGTA TGGAGAGGGCCTCTTTTTTCGGAGAGCAACCACCAGGAACAGCAGCCTTT CTTGTCTGTCCGGAGCCGGCGCTGCCGCTTTTGCTGATGTCATCATCTCC GCAAATATGGGGGCGTGGGGGATGATCTCGCGGAGGTCGGATACTCCTCG ATGAAACGTCACCATCATTCCCGTCGACGCATCACGATCGCTCTGCTCGT CAAACCTTCACACAGCCTATTGCCCGTGCCACGGCGCAGCAAATGCCCTC TGCACACGTGCACCCCCCTTTTGATGTACATGTACCGCACACTCTCGCTA TTTTTTGTTTGGGCTCGAGGTGGCTCTTTGCAACACTTGTTCTGTTGAGG CCCTTTCCCCCCCTCAACTGGTGACCCTCCGTCGAAGGTCCCGTCTTCAG ACGGTGAGGCTCGACAACTAAGGCCATGCATATCTCTCTCCCCCCCCCCC CCCGGCCCGTCACCCTTCTTGTTTGTTCCCTGACCTTGTTCAGGGTGGAC AAGGCGCGCAAGGACCTGTGGAAGCTGTCCGAGGATCTCGTTTCTACCGG CGCCAAGAAGAGCCGTTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13297:268..2886+

>mRNA_H-canaliculatus_F_contig13297.2692.1 ID=mRNA_H-canaliculatus_F_contig13297.2692.1|Name=mRNA_H-canaliculatus_F_contig13297.2692.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1212bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13297:268..2886+ (Hapterophycus canaliculatus Oshoro5f female)
ATGACGGAGGATCGGCTCGAGGCCAACCTGGCCGTGAACTACCTCGGAAA
CTTCTTGCTGACGACACAGCTGCTGCCCCTCCTCAAGAAGTCGCCCGACG
GGAGAGTGCTGTGCGTCAACTCGAGCCTTCACAAGAAGATGACGGAGGAT
CGGCTCGAGGCCAACCTGGCCGTGAACTACCTCGGAAACTTCTTGCTGAC
GACACAGCTGCTGCCCCTCCTCAAGAAGTCGCCCGACGGGAGAGTGCTGT
GCGTCAACTCGAGCCTTCACAAGAAGGCCGAAGCCTTCCGATTCGAGGAC
CCCATGTTTGAGAAGAACTACAGCATGTTCAAGGCCTACGCGAACAGCAA
GCTGGCTCTGCTCATGTTCGCCGAGGAGCTGCAGCACCGCCTCAACAGGG
AGAAATCCACCGTCATCGTCAACAGCGCAAACCCAGGCCGAAGCCTTCCG
ATTCGAGGACCCCATGTTTGAGAAGAACTACAGCATGTTCAAGGCCTACG
CGAACAGCAAGCTGGCTCTGCTCATGTTCGCCGAGGAGCTGCAGCACCGC
CTCAACAGGGAGAAATCCACCGTCATCGTCAACAGCGCAAACCCAGGCAT
TGTAATGACCGATATCTCGCGGGACATGGGGTGGTTCATGCGAGCAGGGA
ATGAGCTGTTCAAGCCGGTCTTGAACCTTTTCTGCAAGCAGCCAAATGCG
GGCGCATTCACCAGGCATTGTAATGACCGATATCTCGCGGGACATGGGGT
GGTTCATGCGAGCAGGGAATGAGCTGTTCAAGCCGGTCTTGAACCTTTTC
TGCAAGCAGCCAAATGCGGGCGCATTCACCAGCGTGTATGCGACAACGAC
GCCCAAGCTGCGCAAGAGCAGCGAAGATGGAGCGCCGGGCGTGGGTGGCC
TGTACATCTCGGACTGCGCGCCGGCAGCGTTCAACCCGGCTGTTTCCGTG
TATGCGACAACGACGCCCAAGCTGCGCAAGAGCAGCGAAGATGGAGCGCC
GGGCGTGGGTGGCCTGTACATCTCGGACTGCGCGCCGGCAGCGTTCAACC
CGGCTGTTTCGGTGGACAAGGCGCGCAAGGACCTGTGGAAGCTGTCCGAG
GATCTCGTTTCTACCGGCGCCAAGAAGAGCCGTTGAGGTGGACAAGGCGC
GCAAGGACCTGTGGAAGCTGTCCGAGGATCTCGTTTCTACCGGCGCCAAG
AAGAGCCGTTGA
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