mRNA_H-canaliculatus_F_contig1329.2687.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1329.2687.1
Unique NamemRNA_H-canaliculatus_F_contig1329.2687.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: D7G7J3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J3_ECTSI)

HSP 1 Score: 461 bits (1186), Expect = 1.290e-149
Identity = 240/322 (74.53%), Postives = 280/322 (86.96%), Query Frame = 1
Query:    1 IPVVAYTVKPELSEFNERGNWCDINSPINTGLYVYGCVPIIGAFCLSFQMRHVRKQMNFFRMQVLQLLFLLVTGTLIFPLLEVD-HDDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKTNQLPPKEHVEPEPKGLLKLIRKVSETVATRSSKDDSESRDSGRTRSS 963
            +PVVAY++KP LSEFNE GNWCDIN  I+T LYVYG VPIIGAF LSFQMR VRKQMNF+RMQVLQLLFL VTGT+IFPLLE   H ++RR WIMYDN++SS+ILFWP I+EPL+R L+GD++YL SYTKGFS LPTP+QMRS LKDQL+LEELR EFEKFADSK+ARELPDFYKACL+RED+ DFFERQAVTTAIIDRFIRV A QEVNISG +R KIL+TEITSYNIF++AM AVLKIMD+NFS EF++++A+K+L++VV  EAEEL+ LRK NQLP  EHVEP+ KGLLK IR+V+++V T SSKD SESR S   RSS
Sbjct:  113 VPVVAYSIKPSLSEFNELGNWCDINVAIDTALYVYGGVPIIGAFFLSFQMRRVRKQMNFYRMQVLQLLFLFVTGTIIFPLLEESLHSNIRRTWIMYDNIVSSIILFWPPIIEPLYRKLSGDEDYLYSYTKGFSQLPTPAQMRSCLKDQLSLEELRCEFEKFADSKVARELPDFYKACLDREDISDFFERQAVTTAIIDRFIRVDAVQEVNISGALRNKILTTEITSYNIFDEAMSAVLKIMDTNFSFEFKKTEAFKNLEQVVKEEAEELELLRKMNQLPEAEHVEPDSKGLLKFIRRVTDSVGTGSSKDGSESRCSITRRSS 434          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: D7G0B4_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B4_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 5.440e-115
Identity = 181/299 (60.54%), Postives = 236/299 (78.93%), Query Frame = 1
Query:    1 IPVVAYTVKPELSEFNERGNWCDINSPINTGLYVYGCVPIIGAFCLSFQMRHVRKQMNFFRMQVLQLLFLLVTGTLIFPLLEVDHDD---MRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKTNQLPPKEHVEPEPKGLLKLIRK 888
            IP VAYT+   LS FNE  NWC+I  PI+T  Y+ G   I  AF L +QMR VRKQMN +R+QV QL FLL+TG+++FPL  +  D+   +RR W++Y N L S++LFWP I EP++R+LTGD +YL SYT+GFS LPTP+QM+ SL+DQL+L+ELR EF+KFA++++ARELP+FY+ACL+R+++EDFF RQA TTAIIDRFIR G+ QE+NIS  +R KIL TEITSYNIFN+AM   + +MD+NFSA F++S+AYK L++ V  EAEEL+RLRK NQLPPK HV  EPKGL+K+ R+
Sbjct:   83 IPAVAYTIDDHLSRFNEVRNWCEIYRPIDTFTYILGSSLIASAFVLVYQMRKVRKQMNEYRLQVFQLAFLLLTGSVVFPLQHLLLDNKHGIRRIWVLYHNFLDSLVLFWPPIAEPMYRYLTGDVDYLNSYTQGFSTLPTPAQMKGSLRDQLSLDELRTEFQKFAENRMARELPEFYQACLDRDEIEDFFGRQAATTAIIDRFIRSGSEQELNISDRIRNKILLTEITSYNIFNEAMSVAVTMMDTNFSAAFKRSEAYKQLERNVRDEAEELERLRKMNQLPPKNHVPTEPKGLVKVFRR 381          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: A0A6H5K1F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F7_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 5.040e-81
Identity = 162/362 (44.75%), Postives = 214/362 (59.12%), Query Frame = 1
Query:    4 PVVAYTVKPELSEFNERGNWCDINSPINTGLYVYGCVPIIGAFCLSFQMRHVRKQMNFFRMQVLQLLFLLVTGTLIFPLLE--VDH-DDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTP---------------------------------------------------------SQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITS---------------------------YNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKTNQ 828
            P V YT   +L+ FNE  NWC+   P+ +  YV   + I GAF L +QMR VRKQMN + +QV QL FLLVTGT++FPL    +DH  ++RR W++Y N+  S++LFWP I EP++R+LTGD+ YL SYT GFS LPTP                                                         SQM+SS +DQL+LEELR EF KFA+ ++ARELPDFY+ACLER+++ED+F RQA T+AIIDRFIRVG+ QEVN+S +VRE+IL TEITS                           +NIF++AM  V+ +MD+NFS  F++S+AYK L++ V  EAEEL  L+K  +
Sbjct:  447 PAVVYTTDEDLAPFNETRNWCESYRPVQSFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNLFDSLVLFWPPIAEPMYRYLTGDEEYLHSYTHGFSTLPTPAQVQDSIPEHVVLDTELRQNILQPVTGCIAFVVFPSLHSCAVTAAIAHFPSSCFPFVSQMKSSFRDQLSLEELRTEFGKFAEERLARELPDFYQACLERDEIEDYFGRQAATSAIIDRFIRVGSVQEVNLSHDVRERILQTEITSRGETGAKMTRQPCSLLRSLPYLTTYLSFNIFSEAMSVVVTMMDTNFSVAFKRSEAYKLLEQHVKDEAEELKILKKVGE 808          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: D7FIS3_ECTSI (Similar to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 8.800e-46
Identity = 99/234 (42.31%), Postives = 152/234 (64.96%), Query Frame = 1
Query:  145 QMRHVRKQMNFFRMQVLQLLFLLVT----GTLIFPLLEVDHDDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKTNQLP 834
            +++ VRKQ N ++     LL+L +       ++  LL   H  +RR  I+Y  V+++ IL W SI EP  + + GD  YL SYTKGFS LP+P+Q+++SL +QL++E+LR EF ++  +K+A+EL DFY   L+RE+V  FFERQA T  I++R+IR  A  +VNIS E REKIL+T++T+Y+IF++A   VL +M++NF  EF  ++ ++ +    + E  E+  LR    LP
Sbjct:   25 RLKSVRKQFNEYQTMKRTLLYLTLALLSYALVVVVLLAGQHVTVRRVAILYP-VITTYILLWGSIREPFMKKILGDDEYLWSYTKGFSELPSPAQLKASLAEQLSVEQLRDEFRQYIKTKVAQELIDFYLDSLDREEVMGFFERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLLRAGGMLP 257          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 5.810e-45
Identity = 110/287 (38.33%), Postives = 172/287 (59.93%), Query Frame = 1
Query:    1 IPVVAYTVKPELSEFNERGNWCD---INSPINTGLYVYGCVPIIGA-FCLSFQMRHVRKQMNFFRMQVLQLLFLLVT----GTLIFPLLEVDHDDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKTNQLPP 837
            IPVVA    P    F+E  N C     ++ +  G+   G + I    F  + Q++ VRKQ N +      LL++ +T    G ++  LL  +    RR  + Y  +L++ IL W SI EP    + GD  YL SYTKGF+ LP+P+Q+++SL +QL++++LR EF ++  +K+A+EL DFY   L+RE+V DFFERQA T  I+D++I+ GA  +VN+SG  REKIL+T++T+++IF++A   VL +M++NF  +F  ++ ++ +      E  EL  LR    L P
Sbjct:  126 IPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFYP-LLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFAQLPSPAQLKASLAEQLSVDQLRDEFRRYIKTKVAQELIDFYLDSLDREEVADFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLLP 411          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: D7FU07_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU07_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.170e-44
Identity = 88/209 (42.11%), Postives = 136/209 (65.07%), Query Frame = 1
Query:  310 LFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKT-----------NQLPPKEHVEPEPKGLLKLIRKVSETV 903
            + W SI EP+ R L GD  YL+S+TKGFS +P+P+Q+++SL +QL++E+LR EF K+ + K+A+EL DFY   L+RE+++++F RQA T  I+D++IR GA ++VNISG  RE+ILST++T+Y+IF+ A   VL +M++NF  +F +++ ++ +      E +E+  LRK            N  PP   V P   GLL    + S  V
Sbjct:    1 MLWGSIGEPIKRKLAGDTEYLLSFTKGFSEMPSPAQLKASLAEQLSVEQLRDEFRKYIEMKVAQELMDFYIESLDREEIKEYFPRQAATMRIVDQYIREGAAEQVNISGRCREEILSTDVTAYDIFDHARAEVLALMETNFQQDFVETEGFRRIADASALEQQEIRLLRKEGFLVADASPTLNSPPPASSVTPPQSGLLNKFTRFSLVV 209          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.370e-44
Identity = 99/240 (41.25%), Postives = 156/240 (65.00%), Query Frame = 1
Query:  130 FCLSFQMRHVRKQMNFFRMQVLQL----LFLLVTGTLIFPLLEVDHDDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKTNQLPP 837
            F  + Q+R VRKQ N +      L    L L     ++  +L+  H  +RR  I+Y  + +  +L W SI EP+ +  T D+ YL S+TKGFS LP+P+Q+++SL +QL++E+LR EF ++ ++K+A+EL DFY   L+RE+++++F RQAVT  I+ ++IR GA  +VNISGE RE+ILST +T+Y+IF+ A V VL +M++NF  EF +++ ++ + +  + E  E   LR    LPP
Sbjct:  211 FVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVYPALTTHTVL-WGSIGEPVLKKWTRDEEYLWSFTKGFSDLPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTHVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVEASELEQRENRLLRAGGFLPP 449          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.760e-42
Identity = 93/224 (41.52%), Postives = 149/224 (66.52%), Query Frame = 1
Query:  130 FCLSFQMRHVRKQMNFFRMQVLQL----LFLLVTGTLIFPLLEVDHDDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDA 789
            F  + Q+R VRKQ N +      L    L L     ++  +L   H  +RR  I+Y  VL++  L W SI EP+ R L GD  YL S+TKGFS +P+P+Q+++SL +QL++++LR EF K+ ++ +A+EL DFY   L+RE+++ +F RQA T  I++++IR G+  +VNISGE RE+ILST++T+Y+IF+ A   VL +M++NF  +F +++ ++   ++VDA
Sbjct:  143 FVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVYP-VLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSEMPSPAQLKASLAEQLSVQQLRVEFRKYVETMVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFIETEGFR---RIVDA 362          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: D7FTZ6_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 4.000e-42
Identity = 96/252 (38.10%), Postives = 155/252 (61.51%), Query Frame = 1
Query:    4 PVVAYTVKPELSEFNERGNWCDINSPINTGLYVYGCVPIIGAFCLSF----QMRHVRKQMNFFRMQVLQL----LFLLVTGTLIFPLLEVDHDDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFS 735
            P++A  + P+L  F+E  N C+  +     +     +       L F    Q+R VRKQ N +      L    L L     ++  +L   H  +RR  I+Y  VLS+  L W S+ EP+ +  TGD+ YL S+TKGFS +P+P+Q+++SL +QL++E+LR EF ++ ++K+A+EL DFY   L+RE+++ +F RQA T  I++++IR G+  +VNISGE RE+ILST++T+Y+IF+ A   VL +M++  +
Sbjct:  121 PLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVYP-VLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRVEFRRYIETKVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMEATLT 371          
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.370e-41
Identity = 111/287 (38.68%), Postives = 166/287 (57.84%), Query Frame = 1
Query:    4 PVVAYTVKPELSEFNERGNWCDINSPINT---GLYVYGCVPIIGA-FCLSFQMRHVRKQMNFFRM--QVLQLLFLLVTGTLIFPLLEVD---HDDMRRAWIMYDNVLSSMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTLEELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFIRVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQSQAYKSLQKVVDAEAEELDRLRKTNQLPP 837
            P++A  V P    F+E  N C+  S   T   G+   G   I    F    Q+R VRKQ N +      L  L LLV    +   + +D   H   RR  I+Y  VL++  L W SI EPL +   GD+ YL S+T+GFS +P+P+Q+++SL +QL++E+LR EF  +  +K+A+EL +FY   L+RE++  FF RQA T  I+ R+IR GA ++VNIS   RE+I+ST +T+Y+IF+ A   VL +M++ F AEF +++ ++ +    + E  E   LR    LPP
Sbjct:  138 PLIALLV-PGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGVNIILDNKHHVLARRLAIVYP-VLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSEMPSPAQLKASLAEQLSVEQLRDEFRGYMRTKVAQELVNFYLDSLDREEIHGFFGRQAATMRIVARYIRDGAPEQVNISEACREEIVSTNVTAYDIFDRARAEVLAVMEAEFKAEFVETEGFRRIANASELEQREKRLLRAGGFLPP 422          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1329.2687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G7J3_ECTSI1.290e-14974.53RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0B4_ECTSI5.440e-11560.54RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5K1F7_9PHAE5.040e-8144.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIS3_ECTSI8.800e-4642.31Similar to retinally abundant regulator of G-prote... [more]
A0A6H5KAT5_9PHAE5.810e-4538.33RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU07_ECTSI1.170e-4442.11Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5JJQ0_9PHAE1.370e-4441.25RGS domain-containing protein n=3 Tax=Ectocarpus T... [more]
D7FTZ7_ECTSI1.760e-4241.52Similar to regulator of G-protein signaling 16 n=1... [more]
D7FTZ6_ECTSI4.000e-4238.10Similar to regulator of G-protein signaling 16 n=1... [more]
D7FTZ9_ECTSI3.370e-4138.68RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1329contigH-canaliculatus_F_contig1329:463..8890 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score469.2
Seed ortholog evalue3e-129
Seed eggNOG ortholog2880.D7G7J3
Preferred nameRGS1
KEGG koko:K16449
GOsGO:0001101,GO:0003674,GO:0004888,GO:0004930,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005886,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0008047,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010182,GO:0012505,GO:0016020,GO:0023052,GO:0030234,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0033993,GO:0034284,GO:0038023,GO:0042127,GO:0042221,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060589,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071322,GO:0071944,GO:0097305,GO:0097708,GO:0098588,GO:0098772,GO:0098805,GO:1901700,GO:1901701
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2CNEE@1,2QVMV@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Exons9
Model size1833
Cds size1833
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929066.1705158-CDS-H-canaliculatus_F_contig1329:462..7121622929066.1705158-CDS-H-canaliculatus_F_contig1329:462..712Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 463..712 +
1696845666.7764952-CDS-H-canaliculatus_F_contig1329:462..7121696845666.7764952-CDS-H-canaliculatus_F_contig1329:462..712Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 463..712 +
1622929066.1923554-CDS-H-canaliculatus_F_contig1329:966..10131622929066.1923554-CDS-H-canaliculatus_F_contig1329:966..1013Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 967..1013 +
1696845666.7903044-CDS-H-canaliculatus_F_contig1329:966..10131696845666.7903044-CDS-H-canaliculatus_F_contig1329:966..1013Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 967..1013 +
1622929066.2035785-CDS-H-canaliculatus_F_contig1329:1553..16731622929066.2035785-CDS-H-canaliculatus_F_contig1329:1553..1673Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 1554..1673 +
1696845666.800392-CDS-H-canaliculatus_F_contig1329:1553..16731696845666.800392-CDS-H-canaliculatus_F_contig1329:1553..1673Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 1554..1673 +
1622929066.2189553-CDS-H-canaliculatus_F_contig1329:2548..27241622929066.2189553-CDS-H-canaliculatus_F_contig1329:2548..2724Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 2549..2724 +
1696845666.8104715-CDS-H-canaliculatus_F_contig1329:2548..27241696845666.8104715-CDS-H-canaliculatus_F_contig1329:2548..2724Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 2549..2724 +
1622929066.2309883-CDS-H-canaliculatus_F_contig1329:3481..35621622929066.2309883-CDS-H-canaliculatus_F_contig1329:3481..3562Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 3482..3562 +
1696845666.8257728-CDS-H-canaliculatus_F_contig1329:3481..35621696845666.8257728-CDS-H-canaliculatus_F_contig1329:3481..3562Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 3482..3562 +
1622929066.2500162-CDS-H-canaliculatus_F_contig1329:4340..44851622929066.2500162-CDS-H-canaliculatus_F_contig1329:4340..4485Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 4341..4485 +
1696845666.8346086-CDS-H-canaliculatus_F_contig1329:4340..44851696845666.8346086-CDS-H-canaliculatus_F_contig1329:4340..4485Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 4341..4485 +
1622929066.278038-CDS-H-canaliculatus_F_contig1329:5286..55831622929066.278038-CDS-H-canaliculatus_F_contig1329:5286..5583Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 5287..5583 +
1696845666.8426707-CDS-H-canaliculatus_F_contig1329:5286..55831696845666.8426707-CDS-H-canaliculatus_F_contig1329:5286..5583Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 5287..5583 +
1622929066.293827-CDS-H-canaliculatus_F_contig1329:8131..84901622929066.293827-CDS-H-canaliculatus_F_contig1329:8131..8490Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 8132..8490 +
1696845666.8569236-CDS-H-canaliculatus_F_contig1329:8131..84901696845666.8569236-CDS-H-canaliculatus_F_contig1329:8131..8490Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 8132..8490 +
1622929066.3169832-CDS-H-canaliculatus_F_contig1329:8532..88901622929066.3169832-CDS-H-canaliculatus_F_contig1329:8532..8890Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 8533..8890 +
1696845666.8749084-CDS-H-canaliculatus_F_contig1329:8532..88901696845666.8749084-CDS-H-canaliculatus_F_contig1329:8532..8890Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1329 8533..8890 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1329.2687.1prot_H-canaliculatus_F_contig1329.2687.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1329 463..8890 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1329.2687.1

>prot_H-canaliculatus_F_contig1329.2687.1 ID=prot_H-canaliculatus_F_contig1329.2687.1|Name=mRNA_H-canaliculatus_F_contig1329.2687.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=611bp
IPVVAYTVKPELSEFNERGNWCDINSPINTGLYVYGCVPIIGAFCLSFQM
RHVRKQMNFFRMQVLQLLFLLVTGTLIFPLLEVDHDDMRRAWIMYDNVLS
SMILFWPSIVEPLFRHLTGDQNYLVSYTKGFSALPTPSQMRSSLKDQLTL
EELRQEFEKFADSKIARELPDFYKACLEREDVEDFFERQAVTTAIIDRFI
RVGACQEVNISGEVREKILSTEITSYNIFNDAMVAVLKIMDSNFSAEFQQ
SQAYKSLQKVVDAEAEELDRLRKTNQLPPKEHVEPEPKGLLKLIRKVSET
VATRSSKDDSESRDSGRTRSSGERNKIRALEQDLGTVDFENDGGDDDDEE
EEDDGNDHVRKLSLVVDVVAVGAASSAACAPAATTATAASTWPPLPARTV
SAPTGSAFAAASACSASAPAPAPAPPPPPSSSASYTNTIFAVGNPRAAPP
PPASASDCVDAISSSSSSPSSSSSSSAAAAAAAAAAATAAASWAFSAAPS
PATAGGSGGAGGGGDGNASGLPSSASPRSFSYRSSEESTSVSWCSDNHTI
NTRGSSECSSVSGRGYGGYGNYGGYGGGKTLRRGASGCSSGSGVLLRSSS
HLNSARCDADD
back to top

mRNA from alignment at H-canaliculatus_F_contig1329:463..8890+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1329.2687.1 ID=mRNA_H-canaliculatus_F_contig1329.2687.1|Name=mRNA_H-canaliculatus_F_contig1329.2687.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8428bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1329:463..8890+ (Hapterophycus canaliculatus Oshoro5f female)
ATCCCCGTGGTGGCCTACACCGTCAAGCCGGAGCTGTCGGAGTTCAACGA GCGGGGCAATTGGTGCGACATCAACTCGCCCATCAACACGGGCCTGTACG TCTACGGCTGCGTCCCCATCATCGGCGCCTTCTGCCTGTCGTTCCAGATG CGCCACGTGCGGAAGCAGATGAACTTTTTTCGGATGCAGGTGCTGCAGCT GCTCTTTCTCCTCGTCACCGGCACGCTCATCTTCCCGCTGCTGGAGGTGG GTGGCCGGTTCTGCTGCTGTCGACACCGCCGCCGTCGTGCCGGTCGTCGC CGTGGCGGCTTTCGTGCGGAGCGGCTCTCTGTCTCGAGCCCGCCCCCTGG CTTCTTGTGCGATACGGCTCCAGGGCTGCCGCCGGCCTCACGCGTTGTCC AACCCGCCGCGCCGACCACCCGCACTCGATGTTTCCTATCCCCACCTTGA TCCCCCCCCCTCCCCCCCCCACGCCACGCGGTCTTCGTCAGGGATGGCTG GAAGACCATGACGACATGCGGCGGGCGTGGATCATGTACGACAACGTCTT GGTGAGCCCTGGCTTCCGCGTCTTCCCCACAAGCTGTCCTTCGGCTTCCA TCGCCCGAGCACCTCCCTACATGACACCCGCGCTTCCCTTCCTTTCTGTA TCGGCATGGTGCATGGTGCATGGTGCATGGTGCCTGGTGCCTGGTGCCTG GTGCATGGTGCATGGTGCATGGTGAATGGAAAGTACGAGGACCAGGCGGA CGCCCTCCTTCGGCTCTGCTTGTGCCTCGCCTCTCTCGCGCGGGTGGCGG CATTGCTGCGTCGACCTGGGACGGGGCACCGGCGGCGGTCGCACGACCGA GTGAAACGGATGTGGCAGGTTACGCCCACCCCGATCCAGACCTGCGAGCA CGCGCGTTCGTGGGACCGCGGCGGCCGCTACAGAGGAGGAGCATCCCTCA CTCTCGTCTACCCTTTCCTACAAGCTCATCGTCACCCACAACTAAATCAA CCGTACCCCCCCCCCCCTCCCCCCGCCCCCCTCACCTCCCACTCCGCGCG CCCCCGCTCCGTCCTTGACGTTTTCCGTTGTTCGCTTGAAGTCATCTATG ATTTTGTTCTGGCCGTCGATCGTCGAGCCCCTTTTCCGCCACCTCACGGG CGATCAGAATTACCTCGTCAGCTACACCAAGGGCTTCTCGGCGCTGCCAA CGCCGTCGCAGGTGCGCCTGCCTGATCAGCTCGCTGCCTCCGCGGGGGCT TGAGCTATCAAGCGTGATGAGGCGTCGGCGTTTCTGTTGTTGGTCGTGGT CGGTGATTATTGTACCCATATGGGTGTCGTGTTGCTGGGGGCTACAGGTT CCTCCTGTTGTCGTTTGTCATGAAGGAAGGAGCAACAAAGCGTGAGCGGG AATATTTTGGAGACAGGACTCTGCGCGGCGGACCGGGGGGGGGCGTCCCG TACAGTGAGGGTTCAGCGGCTCCGCTGCGGTAAAGAACGTTGACAGCGGC GGATGGTCATGCCACCTCCTCTTGTGGACCCCCGGGAGAAATTTCGACAG CACGACTCGTAGATAAGGCCAAGAAGAGGTCCATGAACGAACGAGCCCGT CCCCCTATGCACCCAGCTGCATCGCTGTTGCTCCTTCCCAAGCGACGCAT CGCCCTCGCCGTTGTTGACGGTGGTCATCCCCTTGCCCGGCGTCGAAACG TTGATGTCGGCGTGTCAGCGATCTTACGTCGGATGGAAGCTGGGCGTTAG TTCCGGCGCTTAGCGCCGTTGTCGAGGGATCGAAAATCTTGGAACCGCAC CAGTCCAGCATTCCTAGCCATAGCTTCCATAGCGGCGCGAGCGGTGTGAA CGTGCGAGGTCTGCGATGTCAGTCTCGCGCCTGGCTTTCCACGCGGCTGG CTTTCGCCCCCCCCTCTCCCCAACACGGCGTTTCTGATCTGGACCTGTGC GAAATCCCGTAAGAGAACGGCTCTCGCTGCGAGGTTTGAGGCAAGAAAAC TTTACCTCGGCCGTCCCCAGTGTCTTTCTCCCATTCACGTCATTCGCGCC CTGCCCCTTATTCTCTGCCTTTTCTCTACACCTCAGATGCGATCTTCCTT GAAAGATCAGCTCACGCTCGAAGAGCTCCGTCAAGAGTTCGAGAAGTTCG CGGACTCGAAGATTGCAAGGGAGTTGCCCGACTTTTACAAGGCTTGTCTC GAGAGGGAGGATGTGGAGGACTTTTTTGAGAGGCAGGCGGTTACTACGGC CATCATCGACAGGTGTGAAGATTGCGTCGTTTTTCGTCGAGGTTTGCGGT GTATCTTTCAAAAAAATTATTCATGCATGGTGCAAATGGAGCACCCTTTA AATCGGGTAAATTTTGCTGAGCTCCTTGCGGCGGCACTCTCTCAGGCCTG ACCGGTTCGTTTAGTCTAAGCCTTGCACAAGGTAAATTTTGTTGAGCGCC TTGCAGCGATACCTTCACCGGTTCGTTTTGCCCAAGCCTTCCATTTTACT TGCTCACAATGTGTGCACACACGCAAGAAATGCCAAGGAAAAATTAGAAT GACGGAATGTTTTCCTGACGGAGTAGGATGGGGTACGAAATTCCGCCAGA GTGCTTGTTCTCGTCCGAAAGGAAATCCGAAGGTGGGTATACGGGGTAGT GGTAGTGGTCTCTTTTCCAGGACTGATGGGGCACGGAAGGCCTCCGTATA CGCACCGCTCATCTCGCATACACTGAAGCCTCCTGTGGGCTCGGACCACC CGCACTTGGAGTCAAGTAAATGTACTGCTGTTCGAAAACACGAGCTCAGT GTAGATGGGAGGGAAGAGAGGAAGGAGGCGGCGGCGGCGGAGTCTTTCAA CAGTATCATTCGGGAGGGAGAGACGCTCAAGAGCACCGCGAGCCCTCGTG CTGTCTTGCGGCCGTCGCCGCGAGAGCACTAAAACCCTCTGCCGCGGCGA CGAGTAACCCTGCCTTGCACGCCTGCATCGCGAACCGCGCGCTTGTACGT CGGTGGTAACGAACCCCAGGTTCATCCGGGTGGGCGCTTGCCAGGAGGTG AACATCAGCGGCGAAGTTCGCGAGAAAATCCTCTCTACGGAGATCACCAG GTGCGTTACGGTGGCGGTGCGTATTTGGCGGTCGCGGCGGCGTTTCCTGT TGTCGTGGCTCTCGCTTTCGTTGCGGGTGTCGTGGTCGTTGTCGTTGGTT TCGATAGCGCGGTAGCTCCTTGTCGACACCTCTCCGGTCGAGGTCGATGT TGCTCTGCTCGTCCTCGAGGGTTGATCCGCGGTCGTCTTTGCTTGGTCGT GGTCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGACTTTCTTGCCGG CCCATTTTCGTCCTGGCTCAAGCGGGTGAGAAGCGCCTCGCAACAGCGCA GCGTCGATGTCGCGATCCCGACGGGAATGGGACGCCTAGACACCCAACCG CCGCCGCCCTCAAAACGCTCTCGGCCCCTGCCTCTATATCCCCCAACCCG CGTGTTTTCTTGGTCACCATCCATTTCGTGTTTCGGTGTTGTGAGCATCT TCTTGGCTTTCGTCCCGAACGGCTGTGTGCTCTTGTCCCGCTTTCCGCCC TGCTCGCATGCATGCCCACGCCCACCACCGGCACCGGCCCCACCGGCACT CTGAAAGGGATTGCTTTCGTTGGGAAAAGCTTCCGGGCCCGCGCCCCCGC ATCGCAGAAAACGTCGCCAACCTGATGATGCCCAACATGTGGTGACCCGT GCCGGGCCATCTCCCTCCACGCCTGTGTTTCCCCCTTTTTCTCGCTCGTG CTGCGCGGTACCTGAAACGAGCGCTGTGCTGAACCACGTGCTCTGCCTGC TTGTGTCTTGCGGATGTTTGTCTTGCAGCTACAACATCTTCAACGACGCG ATGGTGGCCGTCCTGAAGATCATGGACAGCAACTTCAGCGCGGAGTTCCA GCAATCGCAGGCGTATAAGAGCCTGCAGAAAGTCGTGGACGCTGAGGCTG AGGAGCTCGATCGGCTTCGAAAGGTGCCTCAGGAAGCGCACGTGAATATT ATACTCTCATGACATGTCTTCCTTGCATGTTCCTGCACTATCACTTTTTT TGTGGCTGTTTTCTACGCCTCGGGGCGCTCACTTCTTGTGTTTTTGTTGT CTTCACGTCAAACAAGTTATCTCGTGAGACGTAATTTCGTGGCCACAAGC CACCCACCGAGAAAGAAGAACAAAACGGTACACCCCCATCAAAAAGGTAC ACCTTTTAGAAAGAGAGAGATCAACCATGGTCCCAAACAAGTCGTCCACA TTACGTTCTTCAATTGTTGATCCTCAAGTTTATATGAGATTTTTTTTTTT TTCTTGCTCGGAAGAAGTTGTCGAGCAAGTTCTGAAGCTGTAGGTCATAC TCGGCGTATTTGTCTTGCATACAGTATGGTTGGGAGCTTTGCGCGTAAGC CATGCATCGCTGTGGAGTTGCCCTCCGGCCATGTGCGTCTTCTCCTAATT CCCCCAGCTGGGGTACAATGCTGATGAGTCCCCCCCCCTCCCCCCGAAGG AAAAAACAAGGACGAACGAAGGTACGCAAACATGCAAGAAAAGCATGCGA GAAAAATAACAACACCGCAATACGGAAAACCAAAAAAAGACGTGAAGAAT AAACTAAAGAAAATGCCAAGTAGTCGCCACGGAGAGTGCGCGCAGAACAG AGAGGAGGGCCTCTCGGGCTCTCGTTCGACCCCCACCAGCCAGCGCCGCG CGCTTAGCAAACGTCCTTCGGCCCCGCCGCCCACCCCCTGTGCGGAAAAA ATCGTCGCAACGGATCGAAAACAGACGAACCAGCTCCCCCCGAAAGAGCA CGTGGAGCCAGAGCCGAAAGGGTTGCTCAAGCTCATCCGCAAGGTCAGCG AGACGGTCGCGACGCGTTCGTCCAAGGACGATTCCGAGTCGAGGGACTCG GGGCGGACGCGGAGCTCCGGCGAGAGGAACAAGATCCGTGCGCTGGAGCA AGACCTCGGCACGGTGGACTTCGAGAACGATGGCGGCGACGACGACGACG AGGAGGAGGAGGACGACGGCAACGACCATGTGAGAAAGCTTTCGTTGGTG GTTGACGTGGTGGCCGTGGGAGTGGTACTTTGGTGGCCAAATTGGTGGCG GTGGTGGTGGTGGTGGTATCGTTTTCGAAAAAACTAGTTCGCTGGCGGGC GGAGGGGAGGGGAGGTCGGGTGTACTTCTTGATGCAAAACAGCAAGGGTC GGCTCGAGAGCGGGGCCTCGGCGAGCAAGACATCGATCACCAACGAGGGC TGAGCGAGGCTTCGGTGGCGGCGGTGGTGACCACCACGTGGCATCGCTGG CGGCACCGCTCCCGGCACGGCGTTCCCTGCGGAGGAGGCGGTGGCAGCGT CTCACCTCTCTATACGCAGGGAGGCGGGGATAGCGTCGTGTCTCACGACT TTGAAACGCGCCGCTCGGTGCCGCCACCGCAGGGTCTACTTCACGAGTTC TCGCCCACCCTGGCCCGCCCCCCTGTTTTTCTCTCATGGAACGCTTGAAC TTCTGGCGCAACCGCCCGCGCGCGTTCTGTGCTCTTTCCAGGGCATCGTG CGGCGTCTGAGCGATCGGCGGCCGCGACCTCCTCAGCTCGACTGTTTCAT GGAGGAGGAGAGGAAGGGGGAAGTGCCCGAGGTAGGGAAATGTGTGCTGT CGATCGATGGGAGCCCGCAACAAGACGGGCCTGGTGTGGTTCTTGTTACC GCTGCTACCACCGCGTTCTGGCGATCCATTCCCGTGCGACGTCCAGGCCG ACCCGTTCTCGTTATCAAGGCGTTCAAGCCAACCCTTTTGCGAAGGAGTC TCGGCTTTCGATGGTGGTACGAGGCTTTCCTCGAATCGTCTTTCTCAGCC GCAGTCGATGTCCGTCTCCTCGTTCACGTGCGCGTCTGTACCGAGACGTA CCTCATAGTCGGTCTCCTCGATAGGATCCGAGTTTTGGGGTTAGTTGTGA AGAGTCATCGAAGATTTTTTTTATTGGAGGGGGATGACCTCCCGACCTAG TACATCGACCTAGAGGCTTCTGATGTTCAAATACTAACAGAACAAGGAAA AACGAAGCCAAACCCTTTAGTTCAGATCCATGCTTGGCGAACACAACGAC CCATAGCAGCGCTCGGCGAAAAGGACCAAAGTCTCGCGAATAGCCCAGGA ACAGCCTAAGGGGCGTGCGCTTTTTTTTTGCCGTTCGGAACCTTGCCCTT GGATTGTGCAGCACGTGGCTGCTAGAGGACGTGTCAGACCCCGAAACCGG CTTGGCCACGAGAGCATGCGATAAAGCGTGTAGGGGGTGAGGGCAAAGGG TGGCAGCGCTGCCTGTACAAGCAGCGATTGTTGTCTCAGGTGCTGCGTAG CTGAAATTCCAACGGCCTCATGAATCTGCGATTGGCCCGCGGCTCCTGCT CAACGATACTCTTGGCCATGCAGCTTAGAACGAGAGCAACGAGGAGCCGA GGAGGTGACTTGTACTGGTATGTTTTATCGCAGGCGGTCGGCGACTTCAC GTCGGCCACCGCGACCGTCGGTTCTGTTTCCGTTCCACCAAATGTTGCTC CGCGATCGCGTGACCGTTGTGGATCTCCAATAACATAAGGTGGGTATGAT TGGCCCTCGTCGTCTCCTAGACCCAAGAGAAAACCACCTACACTGCGATT CTTCGCGACTTCAAACCCAACTAATATTTTTTGAAACCCGATTCCGTCCT CTCGGCAAGACCGATTCTGACCATCGGCAAAGCTTCTCCAGGGTTCGGCC AACTCATCATACCAGCAGGCAGCAAACTTGCAGCAGACCACCACTTGCGT AAAATCAGCTCCTTCCTTCATCAAAAGTCGCAGCGAACTCGGCTAGTCCA GTTCGGAGCCCCGCGTTGTCCAACGGTGAACTACCACGGCCGACATATCT ACCCGCCGAGCCTCGGCAAAAAAGCCGACATCGCACCATCAGTCGTTAAC TATTGCCGTCCCCGATCGGGAAGTAGCGCGTTCACAAAAACCCCGCTCCC TTCCCCCCCCCCCCCCCCTCCGCCGTTGAAACTCTCTGTAATCTCCCGCC CGCGACCCTCTCGAATCAACGCTTGCTGCGTTCACACTCGTCAGTTGGGG GGTCGAGGCGGCGAGGACGGCTTCCACGTGTACCCGCGCCAGAGCGAGGT GGACTTCCGCAGTAGACCCCGAACGGCGGGGGCGGCGGCGGCAGCGGTTC CGGAGCTAGCGGAGGCAACAGAGGGGGCCGCCGCCGCCGCCGCCGCCGCG GCATCGGCCCGTTCGGAGAGAGAAGAGCTCCGTGGAAGGCAGCAGCGAAT ACGGGCCTCCTCGATTGCGCCGGCGGCGACGGGGGCGGCAGCGGCCGCTG GGGGCGAGATGGCGGCGGCGGCGGCGGCGGCGATGGCGATGGCGGCGGGG GAGGGAGACCCCGCAGCTCCTCCACCACGCACGTATGCGTTGGCGGCGAG GTCGAACGCGAGCTCTTCGCCGAGGGCACCCCTACCGTCGCCGTCGAGAC CGCTTTCGAGCTCGACCTCGACCTCAACCACGGGGATCTCGAGACCGAGC TCGGGGTCGACGACGTCTAGGCCGACCTCAGAGTCCATCTCAAACTCGGA GTCTATCTCGAACTCAGAGGCTGCCTCGAGCGCGGCATGTGCGCCCGCGG CAACGACGGCGACAGCGGCGTCAACTTGGCCACCGCTACCGGCGAGGACA GTGTCTGCTCCGACCGGCTCCGCTTTCGCCGCCGCTTCCGCTTGTTCTGC CTCCGCTCCCGCGCCCGCTCCCGCTCCCCCTCCCCCTCCCTCGTCCTCCG CCTCTTACACGAACACCATCTTCGCGGTTGGAAACCCGCGGGCGGCCCCT CCCCCCCCGGCCTCGGCCTCGGACTGTGTCGACGCCATTTCTTCGTCTTC CTCCTCGCCCTCCTCGTCCTCGTCCTCTTCGGCGGCAGCAGCGGCGGCGG CGGCGGCGGCGGCCACGGCGGCGGCGAGGTCTTTCACCGCGCTTGGCAGG CCGGTCGGGGAGGAAAAGAGCTGGGCGTTTAGCGCCGCCCCTTCCCCCGC CACCGCCGGGGGTAGCGGCGGCGCCGGCGGCGGGGGCGACGGCAACGCAT CGGGGCTGCCATCCAGCGCGTCCCCGCGGTCGTTCTCTTACCGGTCCTCG GAGGAGTCTACGTCTGTATCGTGGTGCTCGGACAACCACACCATCAACAC CCGCGGGAGCAGTGAGTGCAGCAGCGTCAGCGGCAGGGGCTACGGCGGCT ACGGCAACTACGGCGGCTACGGCGGCGGGAAGACGCTCAGGAGGGGCGCC AGTGGCTGCAGCAGCGGCAGCGGCGTCTTGCTCCGCAGCAGCAGCCACCT CAACTCGGCCCGGTGCGACGCGGACGAC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1329:463..8890+

>mRNA_H-canaliculatus_F_contig1329.2687.1 ID=mRNA_H-canaliculatus_F_contig1329.2687.1|Name=mRNA_H-canaliculatus_F_contig1329.2687.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3666bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1329:463..8890+ (Hapterophycus canaliculatus Oshoro5f female)
ATCCCCGTGGTGGCCTACACCGTCAAGCCGGAGCTGTCGGAGTTCAACGA
GCGGGGCAATTGGTGCGACATCAACTCGCCCATCAACACGGGCCTGTACG
TCTACGGCTGCGTCCCCATCATCGGCGCCTTCTGCCTGTCGTTCCAGATG
CGCCACGTGCGGAAGCAGATGAACTTTTTTCGGATGCAGGTGCTGCAGCT
GCTCTTTCTCCTCGTCACCGGCACGCTCATCTTCCCGCTGCTGGAGGTGG
ATCCCCGTGGTGGCCTACACCGTCAAGCCGGAGCTGTCGGAGTTCAACGA
GCGGGGCAATTGGTGCGACATCAACTCGCCCATCAACACGGGCCTGTACG
TCTACGGCTGCGTCCCCATCATCGGCGCCTTCTGCCTGTCGTTCCAGATG
CGCCACGTGCGGAAGCAGATGAACTTTTTTCGGATGCAGGTGCTGCAGCT
GCTCTTTCTCCTCGTCACCGGCACGCTCATCTTCCCGCTGCTGGAGGTGG
ACCATGACGACATGCGGCGGGCGTGGATCATGTACGACAACGTCTTGACC
ATGACGACATGCGGCGGGCGTGGATCATGTACGACAACGTCTTGTCATCT
ATGATTTTGTTCTGGCCGTCGATCGTCGAGCCCCTTTTCCGCCACCTCAC
GGGCGATCAGAATTACCTCGTCAGCTACACCAAGGGCTTCTCGGCGCTGC
CAACGCCGTCGCAGTCATCTATGATTTTGTTCTGGCCGTCGATCGTCGAG
CCCCTTTTCCGCCACCTCACGGGCGATCAGAATTACCTCGTCAGCTACAC
CAAGGGCTTCTCGGCGCTGCCAACGCCGTCGCAGATGCGATCTTCCTTGA
AAGATCAGCTCACGCTCGAAGAGCTCCGTCAAGAGTTCGAGAAGTTCGCG
GACTCGAAGATTGCAAGGGAGTTGCCCGACTTTTACAAGGCTTGTCTCGA
GAGGGAGGATGTGGAGGACTTTTTTGAGAGGCAGGCGGTTACTACGGCCA
TCATCGACAGATGCGATCTTCCTTGAAAGATCAGCTCACGCTCGAAGAGC
TCCGTCAAGAGTTCGAGAAGTTCGCGGACTCGAAGATTGCAAGGGAGTTG
CCCGACTTTTACAAGGCTTGTCTCGAGAGGGAGGATGTGGAGGACTTTTT
TGAGAGGCAGGCGGTTACTACGGCCATCATCGACAGGTTCATCCGGGTGG
GCGCTTGCCAGGAGGTGAACATCAGCGGCGAAGTTCGCGAGAAAATCCTC
TCTACGGAGATCACCAGGTTCATCCGGGTGGGCGCTTGCCAGGAGGTGAA
CATCAGCGGCGAAGTTCGCGAGAAAATCCTCTCTACGGAGATCACCAGCT
ACAACATCTTCAACGACGCGATGGTGGCCGTCCTGAAGATCATGGACAGC
AACTTCAGCGCGGAGTTCCAGCAATCGCAGGCGTATAAGAGCCTGCAGAA
AGTCGTGGACGCTGAGGCTGAGGAGCTCGATCGGCTTCGAAAGCTACAAC
ATCTTCAACGACGCGATGGTGGCCGTCCTGAAGATCATGGACAGCAACTT
CAGCGCGGAGTTCCAGCAATCGCAGGCGTATAAGAGCCTGCAGAAAGTCG
TGGACGCTGAGGCTGAGGAGCTCGATCGGCTTCGAAAGACGAACCAGCTC
CCCCCGAAAGAGCACGTGGAGCCAGAGCCGAAAGGGTTGCTCAAGCTCAT
CCGCAAGGTCAGCGAGACGGTCGCGACGCGTTCGTCCAAGGACGATTCCG
AGTCGAGGGACTCGGGGCGGACGCGGAGCTCCGGCGAGAGGAACAAGATC
CGTGCGCTGGAGCAAGACCTCGGCACGGTGGACTTCGAGAACGATGGCGG
CGACGACGACGACGAGGAGGAGGAGGACGACGGCAACGACCATGTGAGAA
AGCTTTCGTTGGTGGTTGACGTGGTGGCCGTGGGAACGAACCAGCTCCCC
CCGAAAGAGCACGTGGAGCCAGAGCCGAAAGGGTTGCTCAAGCTCATCCG
CAAGGTCAGCGAGACGGTCGCGACGCGTTCGTCCAAGGACGATTCCGAGT
CGAGGGACTCGGGGCGGACGCGGAGCTCCGGCGAGAGGAACAAGATCCGT
GCGCTGGAGCAAGACCTCGGCACGGTGGACTTCGAGAACGATGGCGGCGA
CGACGACGACGAGGAGGAGGAGGACGACGGCAACGACCATGTGAGAAAGC
TTTCGTTGGTGGTTGACGTGGTGGCCGTGGGAGCTGCCTCGAGCGCGGCA
TGTGCGCCCGCGGCAACGACGGCGACAGCGGCGTCAACTTGGCCACCGCT
ACCGGCGAGGACAGTGTCTGCTCCGACCGGCTCCGCTTTCGCCGCCGCTT
CCGCTTGTTCTGCCTCCGCTCCCGCGCCCGCTCCCGCTCCCCCTCCCCCT
CCCTCGTCCTCCGCCTCTTACACGAACACCATCTTCGCGGTTGGAAACCC
GCGGGCGGCCCCTCCCCCCCCGGCCTCGGCCTCGGACTGTGTCGACGCCA
TTTCTTCGTCTTCCTCCTCGCCCTCCTCGTCCTCGTCCTCTTCGGCGGCA
GCAGCGGCGGCGGCGGCGGCGGCGGCCACGGCGGCGGCGAGGCTGCCTCG
AGCGCGGCATGTGCGCCCGCGGCAACGACGGCGACAGCGGCGTCAACTTG
GCCACCGCTACCGGCGAGGACAGTGTCTGCTCCGACCGGCTCCGCTTTCG
CCGCCGCTTCCGCTTGTTCTGCCTCCGCTCCCGCGCCCGCTCCCGCTCCC
CCTCCCCCTCCCTCGTCCTCCGCCTCTTACACGAACACCATCTTCGCGGT
TGGAAACCCGCGGGCGGCCCCTCCCCCCCCGGCCTCGGCCTCGGACTGTG
TCGACGCCATTTCTTCGTCTTCCTCCTCGCCCTCCTCGTCCTCGTCCTCT
TCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCCACGGCGGCGGCGAG
CTGGGCGTTTAGCGCCGCCCCTTCCCCCGCCACCGCCGGGGGTAGCGGCG
GCGCCGGCGGCGGGGGCGACGGCAACGCATCGGGGCTGCCATCCAGCGCG
TCCCCGCGGTCGTTCTCTTACCGGTCCTCGGAGGAGTCTACGTCTGTATC
GTGGTGCTCGGACAACCACACCATCAACACCCGCGGGAGCAGTGAGTGCA
GCAGCGTCAGCGGCAGGGGCTACGGCGGCTACGGCAACTACGGCGGCTAC
GGCGGCGGGAAGACGCTCAGGAGGGGCGCCAGTGGCTGCAGCAGCGGCAG
CGGCGTCTTGCTCCGCAGCAGCAGCCACCTCAACTCGGCCCGGTGCGACG
CGGACGACCTGGGCGTTTAGCGCCGCCCCTTCCCCCGCCACCGCCGGGGG
TAGCGGCGGCGCCGGCGGCGGGGGCGACGGCAACGCATCGGGGCTGCCAT
CCAGCGCGTCCCCGCGGTCGTTCTCTTACCGGTCCTCGGAGGAGTCTACG
TCTGTATCGTGGTGCTCGGACAACCACACCATCAACACCCGCGGGAGCAG
TGAGTGCAGCAGCGTCAGCGGCAGGGGCTACGGCGGCTACGGCAACTACG
GCGGCTACGGCGGCGGGAAGACGCTCAGGAGGGGCGCCAGTGGCTGCAGC
AGCGGCAGCGGCGTCTTGCTCCGCAGCAGCAGCCACCTCAACTCGGCCCG
GTGCGACGCGGACGAC
back to top