mRNA_H-canaliculatus_F_contig132.2629.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A6H5L1H5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H5_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 2.440e-169 Identity = 260/365 (71.23%), Postives = 281/365 (76.99%), Query Frame = 1
Query: 4 KVFALFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQ------------VKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANIVVVDPAAEEAERLRKL---------------------------AEDKARLQREMEARYLHPETQEYKKFREKLDAKKKKEQSRRDKKPQVDSRRPVKREKNANDRRLRLENRRIKDGRVPTAGGAFG 981
KVF LFCKYDTAQRGCLSLANVYKM+GEKKSIFGDSL+ELIGIRDFQELTFSEWLDAITTFCLFEEE++LRFCFFILDREKNGYIEK+EMRMLVNMLYNIDPVKGPTGNTK+AF+KLSVQQDGKIEFWEFELF+KAFPSL FPAFRLQ VKMMQAVWGE+WWGRK DRLAD+NRLEAMRQRRIK KMGACKYFCWPCGRAEYDKMFPR N+VV DP A+EAERLRK+ AE+KARLQREMEARYL+ ETQEYKKFREKLDAKK+K R V NA++RRLRLENRR+K+GR+P GGAFG
Sbjct: 32 KVFRLFCKYDTAQRGCLSLANVYKMIGEKKSIFGDSLYELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKEEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLLFPAFRLQSTNPPAALTQTKVKMMQAVWGEAWWGRKKRKVQDRLELRRKHEEEDRLADANRLEAMRQRRIKSKMGACKYFCWPCGRAEYDKMFPRTNVVVADPGADEAERLRKVLRMIPPEDVNMREDRKRGGPAYITPAQAEEKARLQREMEARYLNYETQEYKKFREKLDAKKEKXXXXXXXXXXXXXXRSVXXXNNADERRLRLENRRVKNGRLPPVGGAFG 396
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: D7G2J3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J3_ECTSI) HSP 1 Score: 439 bits (1128), Expect = 7.110e-152 Identity = 213/242 (88.02%), Postives = 223/242 (92.15%), Query Frame = 1
Query: 4 KVFALFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANIVVVDPAAEEAERLRKL 729
KVF LFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEE++LRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTK+AF+KLSVQQDGKIEFWEFELF+KAFPSLFFPAFRLQVKMMQAVWGE+WWGRK DRLAD+NRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRAN+VV DPAA+EAERLRK+
Sbjct: 32 KVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRNFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEAERLRKV 273
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A835ZCW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW1_9STRA) HSP 1 Score: 222 bits (566), Expect = 8.760e-66 Identity = 126/327 (38.53%), Postives = 185/327 (56.57%), Query Frame = 1
Query: 4 KVFALFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNG------------------YIEKDEMRMLVNMLYNIDPVKGPTGNTK------------------------------IAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPR-------ANIVVVDPAAEEAERLRKLAEDKARLQREMEARYLHPETQEYKKFREKL 819
+ F +F +DTA++G + LA YKM+GE+KS+FGDS+F+L+G+RD +E+ F EWL AI T+CLF+E DVL++CF+ILDREK YI DE ++L ++LYN+D + P+GNT+ IA K+ VQ DGKIEFWE ELF+KAFPSL +PAFR+QVKM Q VWGE WW R+ AD R +R++RK+G +++C P Y ++ P A + + AA++ E +L+ KA+L+R M+ + L PET+EY++++E++
Sbjct: 31 QAFDIFQAHDTAKKGTIPLATFYKMIGERKSMFGDSIFDLLGVRDTREIDFGEWLQAIVTYCLFDESDVLKYCFYILDREKQQLRKGAVGGAKADAFIKERYIVMDESKLLADLLYNVDCKRRPSGNTRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRIALNKVPVQADGKIEFWELELFNKAFPSLLYPAFRMQVKMTQLVWGEDWWDRRRRMLNEDVATRKELERLALEADKKRRRKAYDQRVRRKLGVARFYCCPWAVDRYQELHPMDPPPLTPAQLAAM-AAAQKTEA--QLSAAKAKLKRVMDMQMLIPETEEYRRYKERV 354
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A7S2C3E2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3E2_9STRA) HSP 1 Score: 194 bits (494), Expect = 3.980e-56 Identity = 99/267 (37.08%), Postives = 164/267 (61.42%), Query Frame = 1
Query: 10 FALFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANIVVVDPAAEEAERLRKLAEDKARLQREM----EARYLHPETQEY 798
++ F D G + +++ YK EK+SIFGD++FELI L F E++ A+ T+CLFE++++LRFCF+I D++KNGYIE++E+R +VN+LY + P GNTK+A ++L DGK++F EF+ F+++FP+LF+PAFR+QV M+ + G++WW +K + + RL M+QR+I++KMG +YFC R +Y+ +FP + D + + +LAE++A+ + + E +PET+E+
Sbjct: 32 WSAFRSIDKKLTGSVDISDFYKFFEEKRSIFGDAIFELIDCNQSGSLDFGEFVHAVVTYCLFEQDEMLRFCFYIFDKDKNGYIEQEELRWMVNILYGLGPTDKLKGNTKVAVDRLDFNDDGKVDFKEFKEFNRSFPALFYPAFRIQVNMINLIAGDAWWEKKKRWLQDEKDRKRAREEYSKRKEKARLRKMQQRKIRKKMGYVRYFCCFLERKKYELLFP-----IEDSDNKNEKTAAQLAEERAKAREKAKHLAELAIKNPETEEW 293
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A6S8V9R4_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8V9R4_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.410e-48 Identity = 99/261 (37.93%), Postives = 150/261 (57.47%), Query Frame = 1
Query: 1 MKVFALFCKY----DTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANIVVVDPAAEEAERLRKLAEDKARLQREMEAR 771
+K A+F ++ D G +++ Y + EK+SIFGD +F+L I +EL F E+L A+ T+CLFE +++LRFCF+I DR+KNGYI K+E+ +++ +LY+I P +GNT+ A E L D K+++ EF FH FP+LF+PAFR+Q M+ G+ WW +K + RL +R++RI++KMG +Y P RA + K+FP V D AE+ +L KA+ QRE+E R
Sbjct: 25 VKELAVFWRHFREGDKEMLGVIAIDQFYLLFHEKRSIFGDGIFDLCDIHHTEELDFGEYLVAVITYCLFEPQEILRFCFYIFDRDKNGYIMKEELELMLRVLYHIVPPNDFSGNTRNALELLDFNDDEKVDWQEFNRFHVLFPALFYPAFRIQQTMITQTMGQRWWDKKKRYLHEEKVRRDMIEQLAARKEHARLLKLREKRIRKKMGLLRYMFCPAQRAAFRKLFP-----VDDAQAEKTLSEAELQVQKAK-QREVERR 279
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A7S2D7S8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7S8_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.020e-41 Identity = 89/260 (34.23%), Postives = 148/260 (56.92%), Query Frame = 1
Query: 16 LFCKYDTAQRGCLSLANVY-KMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANIVVVDPAAEEAERLRKLAEDKARLQREMEARYLHPETQ 792
+F K D + G ++ + + K++ E +++FG+++FELI D +L F E+L + T+C F+E ++L+FCFFI DREKNGYI++DE++ V++L+N V N + AF+ + Q DGK +F EF+ +K FP++ +PAFR+Q MM + GE WW +K + N E RQ++I+ MG KY+ P R+ +D+ +P ++ ++ +A+ KL E+ R Q+E R + TQ
Sbjct: 32 VFRKCDYDRIGIVATEDFFTKIVQEGRNMFGNAIFELIDAEDPDKLEFGEFLQGVVTYCCFDELEILQFCFFIFDREKNGYIDQDELKFFVDVLHNEQQV----ANVRTAFQSIKFQTDGKFDFPEFQKLNKDFPTVLYPAFRMQQNMMLNIMGEDWWRQKKLMLTLDKEDQRSAHARMMRREFNNRERTRQKQIRHDMGPVKYYLQPSKRSMFDEKYPPMSMEELELI--KAKEREKLEEELIRKQKEXXKRLENELTQ 285
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A2R5GWK3_9STRA (Calmodulin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWK3_9STRA) HSP 1 Score: 150 bits (378), Expect = 8.660e-39 Identity = 89/242 (36.78%), Postives = 124/242 (51.24%), Query Frame = 1
Query: 4 KVFALFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKY-FCWPCGRAEYDKMFPRANIVVVDPAAEEAERLRK 726
K + +F KYD G + + Y+++ E++++FGDSLFEL+ I L FSE++ I T+ LF D+L+FCFF+ D++KNGYI+ DE+ LV ML+ PT N + A DGKI+F EF+ + FP L PAFR+Q MM GE WW K RL + R +QR+++ KMG Y FC F + V+ AAEEA R K
Sbjct: 28 KFWRIFQKYDRDHGGTIDVEEFYRLIEEERTVFGDSLFELVDIDCSGTLDFSEFVQTIATYALFARVDILKFCFFVFDKDKNGYIDSDELHALVEMLHG----NNPTSNCRTALANFDTNSDGKIDFEEFQAMNVRFPQLLHPAFRMQQNMMINTLGEQWWNGKKLMLQEERNADNALEERLRLKELQRQHRNQQRQVRHKMGFFGYYFC-----------FFKRGKVLAQIAAEEAIRAEK 254
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A8J2S6B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6B5_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.340e-37 Identity = 81/243 (33.33%), Postives = 140/243 (57.61%), Query Frame = 1
Query: 16 LFCKYDTAQRGCLSLANVY-KMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFP--RANIVVVDPAAEEAERLRKLAE 735
+F K+D +R +++++ Y K++ ++IF D LF+LI D + + F E++ A+TT+C FE +VL+FCFF+ DR+K G+I ++EMR+ V+ ++ + + N + A + L ++DGK +F EF+ H +PS+ FPAFRLQ MMQA+ GE +W K + R+ +++R MG+ KY+ P RA+Y +++P + V+ + A+R ++LAE
Sbjct: 40 MFKKHDKERRSIIAISDFYDKIVFVPRTIFCDGLFDLIEAADSESIDFGEFVAAVTTYCFFEIPEVLKFCFFVFDRDKKGFITQEEMRLFVDAMHGNEM----STNVEFALDNLKYRKDGKFDFEEFKGMHHLYPSVLFPAFRLQNAMMQAMGGEQFWESKKLELSMQKEDERKREANREAREKAEAYKYREDQVRRHMGSIKYYLMPKNRAKYYEVYPLPKKYRVMEEQERARAKREKQLAE 278
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A8K1C2H3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2H3_PYTOL) HSP 1 Score: 141 bits (355), Expect = 9.320e-36 Identity = 83/229 (36.24%), Postives = 122/229 (53.28%), Query Frame = 1
Query: 7 VFALFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXX---DRLA---DSNRLEAMRQRRIKR-------KMGACKYFCWPCGRAEY 654
++A F K D + G + A YK + EK S FGD++F LI + +L FSE+++A+ FC+ +ED+L+FCF + D +KNG IE E+ L+ ML+ G T N K AF+ DGKI+F EF++ + FPSL +PAFR+Q M G SWW +K D+ D + EA R+ ++KR +MG C ++C PC R +Y
Sbjct: 33 LYAKFLKCDKDKGGTIDRAEFYKSIDEKDSEFGDAIFALIDEDNSGQLDFSEYVEALGKFCVLSKEDMLKFCFNVFDADKNGTIEGPELTHLMEMLH----ADGQTSNMKQAFKSFDFNDDGKIDFQEFQMLNAQFPSLLYPAFRIQQNMRIYTMGVSWWRKKIEELHHEKAEQLAKLQAMGEDKAKGDNDEDAKEAARRAKLKRQEQAVRIRMGCCMFYCCPCRRHKY 257
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Match: A0A1V9YZW5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZW5_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.180e-33 Identity = 81/246 (32.93%), Postives = 131/246 (53.25%), Query Frame = 1
Query: 34 TAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEDVLRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKIAFEKLSVQQDGKIEFWEFELFHKAFPSLFFPAFRLQVKMMQAVWGESWWGRKXXXXXXXXXXXXXXXXXDRLADSNRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANIVVVDPAAEEAERLRKLAEDKARLQREMEAR 771
T+ G ++ ++ E+++ GD++F LI I EL FSE+++A+ FCL E++L+FCFF+ D++KNG IE E+ L+ +L+ +G T N K A DGK++F EFEL H+ FP+L +P FRLQ + G SWW RK +R D + +++ ++KMG +Y+ PC R++Y + + EEA++ R++ K +L+ MEAR
Sbjct: 60 TSGSGTINRDEFFRSCHEERTAVGDAVFALIDIDGSGELDFSEYVEALGAFCLLNPEEILKFCFFVFDQDKNGTIENAELDSLLEILH----AEGGTSNMKEALASFHFHADGKLDFAEFELLHQQFPTLLYPVFRLQENLKLYTMGSSWW-RKRVELLQAIKDEKDRPEGERKEDIAAKKKAKRQLARKKMGCFRYYFCPCRRSKY---MVEETAISEEALIEEAKQ-REIEAQKKKLEEAMEAR 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig132.2629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig132.2629.1 >prot_H-canaliculatus_F_contig132.2629.1 ID=prot_H-canaliculatus_F_contig132.2629.1|Name=mRNA_H-canaliculatus_F_contig132.2629.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=328bp MKVFALFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELback to top mRNA from alignment at H-canaliculatus_F_contig132:28605..32170+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig132.2629.1 ID=mRNA_H-canaliculatus_F_contig132.2629.1|Name=mRNA_H-canaliculatus_F_contig132.2629.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3566bp|location=Sequence derived from alignment at H-canaliculatus_F_contig132:28605..32170+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig132:28605..32170+ >mRNA_H-canaliculatus_F_contig132.2629.1 ID=mRNA_H-canaliculatus_F_contig132.2629.1|Name=mRNA_H-canaliculatus_F_contig132.2629.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1968bp|location=Sequence derived from alignment at H-canaliculatus_F_contig132:28605..32170+ (Hapterophycus canaliculatus Oshoro5f female)back to top |