mRNA_H-canaliculatus_F_contig1318.2615.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1318.2615.1
Unique NamemRNA_H-canaliculatus_F_contig1318.2615.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: A0A6H5JLS0_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS0_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 2.090e-145
Identity = 234/332 (70.48%), Postives = 256/332 (77.11%), Query Frame = 1 
Query:  187 PLG---SNSCLSGAAQATGSGSGLG--TLARSPIRLLGKGNAGRTCSNWARSNTQR-WGLARGLARTQKL-----VSKPAA-----------GLSARRLSSFLPRGGG-SDSMTVYGVVGLNLAGTMVMFLHENQGTGGPFIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQIILLVVPVQTGVAGALYLGATLYQVATNGDTVPFLGGPTQEIWRTLGAVAAGVAMAVVSRGRGGGRYKFIQRY 1113
            PLG   S +  + AA+ T +   +G  +LARSP  LLG+  A   CS+W RS     W  AR     + L     V  P A           G   R LSSFLPRGG  SDSM VYGVVGLN+AGT+ ++LHE QG GGPF+F NFMVSTYTTL QGRLHTLLTSNFSHSNLWNGAIFSYM+Y+LGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIA RLG P+VLQVDPY+ SSGGSGATLA+LAWYCASFP SQIILLVVPVQTGVAGALYLGATLYQV +NG  VPFLGGPTQEIWRTLGA AAGV +A+ SRGRGGGRYKFIQRY
Sbjct:   24 PLGCGNSPAMATSAARTTSAAVAIGQRSLARSPTVLLGRSGAKHACSSWVRSRASPPWSFARAGRLPRSLQHGSSVVPPCASWANQGGRRGVGAGNRALSSFLPRGGRYSDSMIVYGVVGLNVAGTVAIYLHETQGAGGPFLFGNFMVSTYTTLMQGRLHTLLTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVVVALASRGRGGGRYKFIQRY 355
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: D8LNG3_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG3_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 3.470e-132
Identity = 190/220 (86.36%), Postives = 205/220 (93.18%), Query Frame = 1 
Query:  454 MTVYGVVGLNLAGTMVMFLHENQGTGGPFIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQIILLVVPVQTGVAGALYLGATLYQVATNGDTVPFLGGPTQEIWRTLGAVAAGVAMAVVSRGRGGGRYKFIQRY 1113
            M +YGVVGLN+AGT+ M+L+E+QGTGGPF+F NFMVSTYTTL QGRLHTL TSNFSHSNLWNGAIFSYM+Y+LGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIA RLG P+VLQVDPY+ SSGGSGATLA+LAWYCASFP SQIILLVVPVQTGVAGALYLGATLYQV +NG  VPFLGGPTQEIWRTLGA AAGV +A+ SRGRGGGRYKFIQRY
Sbjct:    1 MVIYGVVGLNVAGTVAMYLYESQGTGGPFLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVMVALASRGRGGGRYKFIQRY 220
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: A0A6V1XU43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XU43_HETAK)

HSP 1 Score: 99.0 bits (245), Expect = 1.320e-19
Identity = 66/203 (32.51%), Postives = 96/203 (47.29%), Query Frame = 1 
Query:  406 ARRLSSF-LPRGGGSDSMTVYGVVGLNLA------GTMVMFLHENQGTGGPFIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQI-ILLVVPVQTGVAGALYLGATLYQVATNGDTV 990
            +R  SSF LP G       +YG++G NLA             +++      F+  NF +S    + Q +LHT++TS FSH  L +  +    L+  G  AI  LG + FL LY+ GG  S  C +    +    G P  L + PY  S G SGA  A + W C  FP   + I +++PV   V G L++G  L+ +   G  V
Sbjct:   50 SRSFSSFTLPSG----ERVLYGIIGANLAVFGLWNAAESDAFYQHSWRARKFMHDNFTMSAQGVVNQLKLHTMITSTFSHRELGHLLMNMVTLFFFGREAIMILGTKSFLKLYVYGGLTSSACHLGWSMVGPYAGVPGSLMISPYQKSLGASGAVNATVLWSCLMFPARTVYIYMILPVPAAVLGILFVGKDLWGLYEGGGNV 248
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: A0A7S0EHB7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EHB7_9CRYP)

HSP 1 Score: 87.0 bits (214), Expect = 4.240e-15
Identity = 70/236 (29.66%), Postives = 115/236 (48.73%), Query Frame = 1 
Query:  397 GLSARRLSSFLPRGGGSDSMTVYGVVGLNLAGTMVMFLHENQGTGGPFIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVD--PYFISSGGSGATLALLAWYCASFPGSQIIL-LVVPVQTGVAGALYLGATLYQVATNGDTVPFLGGPTQEIWRTLGAVAAGVAMAVVSRGRGGGRY 1095
            G +  R++SF       +   +Y ++G N    +V  L +N+     F++++F +ST       +LHTLLTS FSH + WN       L+  G   +  LG ++FL LYL GG  S +C V  P ++ R    T    D  P F     +GA  A++A+   + P   ++L +V+P+   + GAL++G  ++ V T   +    G        +LG   AG+    ++RG GG R+
Sbjct:  122 GWNRSRMNSFW------EENMLYAIIGANC---VVFVLWQNRNLQY-FMWNHFTISTSGIFQDFKLHTLLTSIFSHPHFWNLFANMVTLWFFGAECLALLGAKRFLQLYLAGGLTSSVCHVVWPIVSPR----THRAADRRPQF---SATGAVNAMVAYSILTLPQRTVLLYMVIPIPASLLGALFIGKDVWAVMTGDSSYGNAG--------SLGGSLAGIYFWYMTRGVGGRRF 332
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: A0A8K0JHW0_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JHW0_9TREE)

HSP 1 Score: 82.4 bits (202), Expect = 1.870e-13
Identity = 76/220 (34.55%), Postives = 99/220 (45.00%), Query Frame = 1 
Query:  460 VYGVVGLNLAGTMVMFLHENQGTG--GPFIF----SNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQIILL-VVPVQTGVAGALYLGATLYQVATNGDTVPFLGGPTQEIWRTLGAVAAGVAMAVVSRGRGGGRYK 1098
            +YG++G N+   +V    +   T    P ++     NF+VS    L  GRLHTLLT  FSHSN  + A+    LY +GP     LG   FL LYL GG  S +  +A   +                 S G SGA  A LA+Y A FP +Q +L  VVP+    A        LY    +   V    G        +G + AGVA A  SRGRGG R +
Sbjct:  147 IYGIIGANVGIFLVWQYAQASWTRFRDPTLYRWMSQNFIVSE-ANLAAGRLHTLLTCCFSHSNTGHIALNMLGLYFIGPATAGLLGPASFLGLYLGGGIVSSMVSLAWHRMMSS-------NRSKSHGSEGASGAIYASLAYYAAMFPQAQFLLFFVVPLPAWAAVGGIFAYDLYSSIRSPMAVTDSAGH-------VGGLLAGVAYAFRSRGRGGPRMR 351
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: A0A7S2TI75_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TI75_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 7.360e-11
Identity = 55/176 (31.25%), Postives = 82/176 (46.59%), Query Frame = 1 
Query:  541 IFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGP---GIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQIILLVVPVQTGVAGALYLGATLYQVATNGDTVPFLGGPTQEIWRTLGAVAAGVAM 1059
            ++ NF  S    +  GR+HTL+TS FSH   W+ A+  + L S GP  +  +G   F+  YL  G  S +  +A P    I R+   PT+L V     S G SGA  ALLA +   FP  +++++  P  +  A  ++     +   T G    F+G         LG +A G  M
Sbjct:   88 MYRNFTTSV-AAVASGRVHTLITSVFSHKEFWHYALNMFALTSFGPVLVDIMGNEHFMKFYLGSGVLSSVVGIAVPLAQWIVRKQ--PTILAVP----SLGASGAVFALLATWTQVFPHERLMIVFFPFVSVEAQQIFPAIVAFD--TLGCLYGFVGNSFLNHGAHLGGMACGYLM 254
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: E6QYZ2_CRYGW (Rhomboid domain-containing protein n=3 Tax=Cryptococcus gattii species complex TaxID=1884637 RepID=E6QYZ2_CRYGW)

HSP 1 Score: 69.7 bits (169), Expect = 1.970e-9
Identity = 61/177 (34.46%), Postives = 85/177 (48.02%), Query Frame = 1 
Query:  460 VYGVVGLNLAGTMVM--FLHENQGTGGP----FIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQIILLVV---PVQTGVAGALYLGATLY 963
            VYG++G+N A  ++    L   Q    P    F+ +NF+++     + GR+ TL+TS FSHSN  +  +    LY L P A   +G   FL LYL  G FS L           LG+    Q   ++ S G SGA  A LA+Y A FP SQ++L  V   PV   + G   +    Y
Sbjct:  127 VYGLIGINGAVFLLWQYALSSAQRFRDPSLLYFLRNNFILNEVNVFS-GRIWTLVTSAFSHSNGTHIFVNCLGLYFLAPAAASIMGSASFLGLYLGAGVFSSLVS---------LGYHRFSQ-HRWWGSEGASGAIYACLAYYGALFPNSQVLLFFVIPMPVWVAIGGIFAVSLFFY 292
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: UPI00199EF9F0 (Rhomboid family intramembrane serine protease n=1 Tax=Bdellovibrio sp. TaxID=28201 RepID=UPI00199EF9F0)

HSP 1 Score: 67.8 bits (164), Expect = 2.510e-9
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 1 
Query:  478 LNLAGTMVMFLHENQGTGGPFIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQIIL 903
            +N+A  +   L  N      F+ +NF+VS ++++TQGR+ TL+TS FSH+   +     Y+L S GP     LGR +FL  Y + G  S LC  A             L  +P   + G SGA   ++  +   FP  +I+L
Sbjct:   10 MNIAVFIAWQLSRNDEVRYLFMANNFLVS-WSSITQGRVWTLITSVFSHNAFLHLFFNMYVLDSFGPIVESVLGRARFLKFYFIAGVISSLCHAA---------VSAFLLHEPGLPALGASGAISGMIFLFALLFPKQKILL 141
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: A0A433D1L4_9FUNG (Rhomboid domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D1L4_9FUNG)

HSP 1 Score: 70.5 bits (171), Expect = 2.700e-9
Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 1 
Query:  538 FIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVA-----GPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQ-IILLVVPVQTGVAGALYLGATLYQVATNG----DTVPFLGG 1005
            F+  NF+VS    +  GRLHTLLTS FSH +L +  I  ++LYS+G   I+ +G  +FL LY + G    L  +A      P +A   G     +  P   + G SG+ + +  ++  ++P ++ +I  V+P+   +   L+ G  +Y+ +T      D+   +GG
Sbjct:  287 FMTKNFLVSN-NNIEHGRLHTLLTSAFSHKDLPHLGINMFVLYSIGTAVIETVGATRFLVLYSVAGIAGGLAHLAYHRFIRPVLASNKG--QAREQFPITGTLGASGSLMGITTFFACAYPHARFLIFFVIPMPAYLMVGLFAGYDIYRASTLSPGRVDSASHIGG 449
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BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Match: Q5KLG1_CRYNJ (Rhomboid domain-containing protein n=4 Tax=Cryptococcus neoformans TaxID=5207 RepID=Q5KLG1_CRYNJ)

HSP 1 Score: 69.3 bits (168), Expect = 3.350e-9
Identity = 57/165 (34.55%), Postives = 83/165 (50.30%), Query Frame = 1 
Query:  460 VYGVVGLNLAGTMVM--FLHENQGTGGP----FIFSNFMVSTYTTLTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCASFPGSQIILL-VVPVQTGVA 933
            VYG++G+N A  ++    L   Q    P    F+ +NF+++     + GR+ TL+TS FSHSN  +  +    LY L P A   +G   FL LYL  G FS L  +     +R            ++ S G SGA  A LA+Y A FP SQ+++  V+P+   VA
Sbjct:  127 VYGLIGINGAVFLLWQYALSSAQRFRDPSLLYFLRNNFILNEVNVFS-GRIWTLVTSAFSHSNGTHIFVNCLGLYFLAPAAASIMGSASFLGLYLGAGVFSSLVSLGYHRFSRHR----------WWGSEGASGAIYACLAYYGALFPNSQVLMFFVIPMPVWVA 280
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1318.2615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLS0_9PHAE2.090e-14570.48Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
D8LNG3_ECTSI3.470e-13286.36Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6V1XU43_HETAK1.320e-1932.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0EHB7_9CRYP4.240e-1529.66Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A8K0JHW0_9TREE1.870e-1334.55Uncharacterized protein n=2 Tax=Filobasidium flori... [more]
A0A7S2TI75_9EUKA7.360e-1131.25Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
E6QYZ2_CRYGW1.970e-934.46Rhomboid domain-containing protein n=3 Tax=Cryptoc... [more]
UPI00199EF9F02.510e-932.39Rhomboid family intramembrane serine protease n=1 ... [more]
A0A433D1L4_9FUNG2.700e-930.12Rhomboid domain-containing protein n=2 Tax=Jimgerd... [more]
Q5KLG1_CRYNJ3.350e-934.55Rhomboid domain-containing protein n=4 Tax=Cryptoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1318contigH-canaliculatus_F_contig1318:9673..14774 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score77.4
Seed ortholog evalue1.4e-11
Seed eggNOG ortholog109760.SPPG_03485T0
KEGG koko:K09650
EggNOG free text desc.rhomboid-domain-containing protein
EggNOG OGs3A5ZS@33154,3Q6XA@4751,COG0705@1,KOG2980@2759
EC3.4.21.105
COG Functional cat.T
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03029
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-04_003970.1
Exons7
Model size1489
Cds size990
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929055.3967178-UTR-H-canaliculatus_F_contig1318:9672..100451622929055.3967178-UTR-H-canaliculatus_F_contig1318:9672..10045Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1318 9673..10045 -
1696845662.549753-UTR-H-canaliculatus_F_contig1318:9672..100451696845662.549753-UTR-H-canaliculatus_F_contig1318:9672..10045Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1318 9673..10045 -
1622929055.5515957-UTR-H-canaliculatus_F_contig1318:14648..147741622929055.5515957-UTR-H-canaliculatus_F_contig1318:14648..14774Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1318 14649..14774 -
1696845662.6203823-UTR-H-canaliculatus_F_contig1318:14648..147741696845662.6203823-UTR-H-canaliculatus_F_contig1318:14648..14774Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1318 14649..14774 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929055.4153008-CDS-H-canaliculatus_F_contig1318:10045..102711622929055.4153008-CDS-H-canaliculatus_F_contig1318:10045..10271Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 10046..10271 -
1696845662.5601292-CDS-H-canaliculatus_F_contig1318:10045..102711696845662.5601292-CDS-H-canaliculatus_F_contig1318:10045..10271Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 10046..10271 -
1622929055.4305067-CDS-H-canaliculatus_F_contig1318:10602..106851622929055.4305067-CDS-H-canaliculatus_F_contig1318:10602..10685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 10603..10685 -
1696845662.5685542-CDS-H-canaliculatus_F_contig1318:10602..106851696845662.5685542-CDS-H-canaliculatus_F_contig1318:10602..10685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 10603..10685 -
1622929055.4488304-CDS-H-canaliculatus_F_contig1318:11520..115791622929055.4488304-CDS-H-canaliculatus_F_contig1318:11520..11579Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 11521..11579 -
1696845662.576819-CDS-H-canaliculatus_F_contig1318:11520..115791696845662.576819-CDS-H-canaliculatus_F_contig1318:11520..11579Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 11521..11579 -
1622929055.4653087-CDS-H-canaliculatus_F_contig1318:11902..120241622929055.4653087-CDS-H-canaliculatus_F_contig1318:11902..12024Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 11903..12024 -
1696845662.5851214-CDS-H-canaliculatus_F_contig1318:11902..120241696845662.5851214-CDS-H-canaliculatus_F_contig1318:11902..12024Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 11903..12024 -
1622929055.4852533-CDS-H-canaliculatus_F_contig1318:12697..127771622929055.4852533-CDS-H-canaliculatus_F_contig1318:12697..12777Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 12698..12777 -
1696845662.593655-CDS-H-canaliculatus_F_contig1318:12697..127771696845662.593655-CDS-H-canaliculatus_F_contig1318:12697..12777Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 12698..12777 -
1622929055.513575-CDS-H-canaliculatus_F_contig1318:13264..133331622929055.513575-CDS-H-canaliculatus_F_contig1318:13264..13333Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 13265..13333 -
1696845662.6029186-CDS-H-canaliculatus_F_contig1318:13264..133331696845662.6029186-CDS-H-canaliculatus_F_contig1318:13264..13333Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 13265..13333 -
1622929055.5343125-CDS-H-canaliculatus_F_contig1318:14297..146481622929055.5343125-CDS-H-canaliculatus_F_contig1318:14297..14648Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 14298..14648 -
1696845662.611662-CDS-H-canaliculatus_F_contig1318:14297..146481696845662.611662-CDS-H-canaliculatus_F_contig1318:14297..14648Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1318 14298..14648 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1318.2615.1prot_H-canaliculatus_F_contig1318.2615.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1318 10046..14648 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1318.2615.1

>prot_H-canaliculatus_F_contig1318.2615.1 ID=prot_H-canaliculatus_F_contig1318.2615.1|Name=mRNA_H-canaliculatus_F_contig1318.2615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=330bp
MLVSRLVRVKPWQVKPPGSWPLGSNSCLSGAAQATGSGSGLGTLARSPIR
LLGKGNAGRTCSNWARSNTQRWGLARGLARTQKLVSKPAAGLSARRLSSF
LPRGGGSDSMTVYGVVGLNLAGTMVMFLHENQGTGGPFIFSNFMVSTYTT
LTQGRLHTLLTSNFSHSNLWNGAIFSYMLYSLGPTAIQHLGRRQFLALYL
LGGAFSQLCQVAGPGIARRLGFPTVLQVDPYFISSGGSGATLALLAWYCA
SFPGSQIILLVVPVQTGVAGALYLGATLYQVATNGDTVPFLGGPTQEIWR
TLGAVAAGVAMAVVSRGRGGGRYKFIQRY*
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mRNA from alignment at H-canaliculatus_F_contig1318:9673..14774-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1318.2615.1 ID=mRNA_H-canaliculatus_F_contig1318.2615.1|Name=mRNA_H-canaliculatus_F_contig1318.2615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5102bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1318:9673..14774- (Hapterophycus canaliculatus Oshoro5f female)
GGTCAAGCCGTCAAGCAACATCAGACACCGCTCGGCACTGGGCACCATTG
TGTTGCACGAGCTGAGACTTGCCATTACAGGGTCGAGGATCACGGGGCTA
GAACAACTACATCAGGGGTAAGGCTGATGCTGGTTTCAAGGCTTGTGCGG
GTCAAACCATGGCAGGTAAAGCCGCCGGGTTCTTGGCCTTTGGGTTCAAA
CAGTTGCCTCTCAGGAGCAGCGCAAGCAACAGGATCAGGGAGTGGATTAG
GAACACTTGCTCGATCCCCGATCAGGCTCCTAGGGAAAGGGAACGCGGGT
CGTACATGTAGCAACTGGGCACGCTCTAACACGCAGCGCTGGGGCTTGGC
GAGGGGCTTGGCGAGGACACAGAAGCTGGTGTCAAAACCTGCGGCGGGAC
TGTCAGCTCGGAGGCTTTCCTCTTTCCTTCCACGCGGAGGAGGCTCGGAT
TCCATGACCGTGTACGGCGTGGTTGGGGTGAGGCACCAGGGTCAGAGAGG
GTCCTTTTAGCCTCGTTGAATCTGCTGTACTCTTTCTTTTCTCGCTTGTA
TCCGCGTGTACAACATGACTCGCAGAAATAAGCTCACCATGTGGTCCTTT
TTTACACTACCTTCAATCTCCATTACGTTGCACCAAAAAACAAATCGATA
CAAGTCTAAGGTTGTACATGCATGTGGATGTGACCAGATGCTATATAGCT
GGAAGACTACTTGTACACACCTACATTTTTAGCGTCTCTTCCAACCAGTC
AAACCCCAGAACCCTGCCGCGGTGAAGCCGCCGCCAGCCCTTACCACGCG
CAATTGACCTCGTACCTGTCCAAGACCCTGTGACCCAGCCCTAACCTCTG
CACGGCGACGCACTGGTCGTTTCAGGTTGGGGTTAGGGTTGTTTCAGGTT
GGGGTTGGGGTTGGGGTTAGGGTATAAATGACGAATAACCTGGTGTACGT
TATGGCGTGGTCGGTAGGCCGGCGCTGCAGCGACATTCAACCGCGATTTC
GAGAACGATCGTTGTTGTTTCTGCATCGTCTACCATTTTTTAGGTAGAAA
ACATACGTGGGGGTATTTATTCTCTTCCTACCCCTGGGTGCAAACAAGAT
TTTGGCTCCGCAGACGGGCAGCACAAGTATCTACACGAACGGATTCTTCT
TCCCTAGATGCCTGCACATGATATTGTTGAGGGTGTCAAGTTTGCATTCG
CTTCTGGGCACCGTCTTTGTTAAACGTGCTGTTGTAGCAACCTTGGTTGC
TCTGCCAAAGATCGTTATCGATGGTCACCGAAATGAACTAAAGCGTATTT
TAGTCTCAAACCACCAGACAAACAGTCCACTTCGTCATGTCCTGCCTCCG
GCTCAAATATCTCCACCGCACGGTTGCCATCGTCTTCTTCCCCCCTTCCA
CTCCGTCTCTCTCTTTCTCCGGGATCTGGGTGCACGTCCAGCTGAACTTG
GCCGGAACGATGGTGATGTTTCTCCACGAGAACCAGGGGACCGGGGGGCC
TTTTATCTTCGTGAGTGAAGCGAGCACACGGCGGGGTACATAGCAAGCTG
GAGAGCGAAATTTGCAGACGTAGACCGGCAGTGCTTTCTCACGTATACAA
AAAGTCGCTCTCTTGTCCTGGATCGCTGTGTGTTCATATTTCGTTTCATA
GTCCACTTAGTATTGATCGTTCCATGTTGCCAAGGAAGCAGCGATCGTGC
GGCAAGGAAGGTAAGCTCGGCGACGTTATGTTGGGTACCCGCTGGGTGGG
CTGGGGAAGTAAATGTCGGCGTTGTGGAAGATTTGGTCATCTCTCGTTGT
CACATATTCTACGCCTGTGCGCGGTTCGGTTTGCGTGGTAGGAAAGATGG
ATCGCGGTTCAGCCCCCAGCGCTTAGTGCTCTACGACCCAAGCTGTACGT
CCCTCCCCCGCTGACTGCTGTGTCCCCGCCCCCCCTCGCACGTCACGTGG
ACGTCGCTGGTTAACGCTACCCTTTCTCTTCCCGCTCCTGTCTCAAGAGC
AACTTCATGGTGTCGACCTACACCACCCTGACGCAAGGGAGGCTGCACAC
CTTGTTGACTTCTAATTTCAGTCACAGGTAACACTTGTCCCCACCAAACC
GTCTTGTGCATTTCGCTTTTACCGTTCTTAGCACGAGGTTACTCGTTCAT
TCCCAGAGTTGAGTTGTGGTGCGTAGTTTTCGGCAGGCGGGGTATGTCTT
TTTGGCTCTAGGGCAAGACTTGTCATCTATCATACCATGCAAAGTTAGCA
AATGTCCAAGTTTCTCTTCGCAACGTTCGTTCGGGCACACAGTTCTCGTG
CTGGCCCCTGGTGTTGTTCCCGTCTGCATACTGTGCCTTCTCGGAAGCAG
ACATCCCGGTGCTTTTCAGGCCGTGCATTTTTCATGCCGACCACGCGGTA
GACGGCGGCGCAGGGGTAGCCTGACGGTCTATCCACGCCGCGCGGGCGTC
TTCCTGTGCGCGCATAAGCTCAGCTGTGCATGCTCCTTTTTTGTTTTGCT
CCTCCACGGCGCGGCGAAGTGCCGTCACGAAAAGGAGGGGCTTGCTGCTC
GCTGCACTGTGCCAAGCTCCCTCGCCCAACAATGACATCAGGCCAGAAAC
TGACGCTCGACCCTTGCCCCCCGTTCCTCACCCCGTCTACGGTTGGTGGT
GCACTCCACTTCCTCGCCCTTTTTTGTCCTTGCGCCGTTTCCTTCGGTCG
TCGTCGCGTCGACTCGATATGTATCGATAAAATTCACGAACACGCGAAAG
CAACCTGTGGAACGGGGCGATATTTTCCTATATGCTATACTCGTTGGGGC
CGACGGCCATCCAGCACCTGGGCAGGCGGCAGTTCCTGGCACTCTACCTC
TTGGGCGGGGCTTTCTCTCAGCGTGAGACGTTCGTTTGTCCGTGGATTTC
GTACACCGTATGAAGCGTTCGTGTGTGTTGTGTTGCGTTTCTGTGTTGCT
GTTTCTTCATATTCTTCTGGCGGCCTCATCACCCATCAGCTTGCTGGCTT
GGATGCTTGATAAATGTTTGGATACCCCGTGTGAAATCTCGTTAGCTTGG
TAGCGCATGCCTTAGCTTGTTGCTATTCTGCTTGTACGCTTGTGAGAAAA
GTATTCGTGGCACGCACCTATCTGATTTGACAAAAGCACTTCTAGCAACA
ACTTGCTAATTAACTTTTGTTTTTCGCTGTCTTTTTCGATGGGAGTTTGC
CAGGTGGCAGGACCAGGGATTGCTCGACGGCTGGGCTTCCCCACTGTCCT
TCAGGTGAGTGCGCCGTGCCTGCGAGCGAAACCGTCGAGGATTCGACTCG
TTCGGCTATCCCAAGAGACGCGCGGGACTCAGTCCACTTGACTGCCGCAA
GTGAACTCGTTGAATCAACGAACCTGGAACACAGCGTGGACAAACCGCCA
CTGTTTGTCGAGTAGAGGCAAGCGTTCTGTGTCTTCCTTAGCGCATCCCG
ACGGTGTTGGAAGCCGGGTTGTTCGCTCGATCTGAACACCTCTTGAAACC
AATGCTCCCGGAATTTGAGGGGTTGATGCCTGCCGCATTCGTCGTCGACC
GCTGGCCGTTTCTCGAAGTGGATGCTGGTCGCCGGCCGCTGCGGGATAGC
GTCGACCTCGTTTATATTTGGAGCATGTTTTCATGAATGCTCATCGGTGA
AACAGTATCGCAGGAGGGAGGGAGGGGTGAGGGGCGGCTTTCGCGGTTCA
ATGGTTACGGTTCTCAGACGCAGGGGAACGTGCCCTTCATATGGCCATGT
CACGTTGTACCGAGACCCCTCTTTTCCCGCCGACGACATCTGTTGTATTC
TGAAACATATGATGAAGCAATACTTCGTATGAAACGCCTATGATCTACTG
TGGCGGCAAAGCCTTCCCTTGGTAAATTTGGGTTTATACCCCTGTCGTGG
GTGCGGGTGGCTTCCAAACGTTTCTTACGATGTTCACCGTTTACCCTGCT
CCCACCTTGTCGTTCACTGGGTGCTCCGCCAGCCGACACATAATCTCTCT
CTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCC
GCCGTCCAATTTCTCTTCTTCCCCGCATGCGCTTAACAGGTCGACCCATA
CTTCATAAGCTCTGGAGGATCTGGGGCGACGCTGGCCCTCCTCGCGTGGT
ACTGCGCGAGTTTCCCCGGCAGGTGATTTCAGAACAAAATCTACTTCGTT
TCGCGTGCTCTACAAAGTTGAGAGGGCTTCACTCTGACGAAAGAGATTGG
AGCTGCAACCGTTACCCGCGCGAATGGGAGTGCCAGTAGGAGAAGCGCTT
GTGAGAACACCTGCGAGGTATTCTTCATTCTAGATCGAAGTTCTCCTCGC
GCGGCCTCCACCCTCAAAACTCCATCGACAGAGAGAGAGACACTCGACAT
CGAGCTATCAACTCGTGCGCTCGCCCCTAACCCCCGCTTCAACCCCCACC
CCCACCCCCACCCCCACCCACTCAACTTTATTTTTCTTCTCTCGCCCACG
TAGTCAAATAATCCTGTTGGTGGTGCCGGTGCAAACCGGTGTCGCCGGAG
CGCTGTACCTCGGGGCGACGCTGTACCAAGTTGCTACCAACGGAGATACC
GTGCCGTTCCTGGGGGGGCCCACGCAAGAGATCTGGCGAACCCTCGGAGC
GGTTGCCGCAGGAGTCGCGATGGCGGTTGTGTCCCGCGGTCGGGGCGGCG
GGCGTTACAAGTTCATACAGAGATATTAATAAAACAAATCGTGGTGGGGT
CGGTGGATGATTGGCCAACAACTTTCTGGCGTCGGCGAGTGGTGCCGTTA
GTTTCTGATCGCGGGAGGTGCATGATTGGTGGATCGATTGGGTAATCGTT
TGGGGCGCGAGTTTGTGCTGCCTGTCGTGTTGGGCCTGTGTCGCGCTCGC
TGTCTGAGTAAGATGCGCGAGGCTCTCAGACAGAATAGATCGCTCGCACG
CCTGGCTACGTTGCATCCGTTCGGCGACGAACAAACCGCAGACAAGTGGG
AATTTTGACAAATGGTTCGACTCAAACGAGTTATCGTCACGTGTGGTAGC
AAACGTCGGAGCAGGTGGAAGAAGCTCCAGCTAATGTAAAGTCAAAGCGG
AC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1318:9673..14774-

>mRNA_H-canaliculatus_F_contig1318.2615.1 ID=mRNA_H-canaliculatus_F_contig1318.2615.1|Name=mRNA_H-canaliculatus_F_contig1318.2615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1980bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1318:9673..14774- (Hapterophycus canaliculatus Oshoro5f female)
ATGCTGGTTTCAAGGCTTGTGCGGGTCAAACCATGGCAGGTAAAGCCGCC
GGGTTCTTGGCCTTTGGGTTCAAACAGTTGCCTCTCAGGAGCAGCGCAAG
CAACAGGATCAGGGAGTGGATTAGGAACACTTGCTCGATCCCCGATCAGG
CTCCTAGGGAAAGGGAACGCGGGTCGTACATGTAGCAACTGGGCACGCTC
TAACACGCAGCGCTGGGGCTTGGCGAGGGGCTTGGCGAGGACACAGAAGC
TGGTGTCAAAACCTGCGGCGGGACTGTCAGCTCGGAGGCTTTCCTCTTTC
CTTCCACGCGGAGGAGGCTCGGATTCCATGACCGTGTACGGCGTGGTTGG
GATGCTGGTTTCAAGGCTTGTGCGGGTCAAACCATGGCAGGTAAAGCCGC
CGGGTTCTTGGCCTTTGGGTTCAAACAGTTGCCTCTCAGGAGCAGCGCAA
GCAACAGGATCAGGGAGTGGATTAGGAACACTTGCTCGATCCCCGATCAG
GCTCCTAGGGAAAGGGAACGCGGGTCGTACATGTAGCAACTGGGCACGCT
CTAACACGCAGCGCTGGGGCTTGGCGAGGGGCTTGGCGAGGACACAGAAG
CTGGTGTCAAAACCTGCGGCGGGACTGTCAGCTCGGAGGCTTTCCTCTTT
CCTTCCACGCGGAGGAGGCTCGGATTCCATGACCGTGTACGGCGTGGTTG
GGCTGAACTTGGCCGGAACGATGGTGATGTTTCTCCACGAGAACCAGGGG
ACCGGGGGGCCTTTTATCTTCCTGAACTTGGCCGGAACGATGGTGATGTT
TCTCCACGAGAACCAGGGGACCGGGGGGCCTTTTATCTTCAGCAACTTCA
TGGTGTCGACCTACACCACCCTGACGCAAGGGAGGCTGCACACCTTGTTG
ACTTCTAATTTCAGTCACAGAGCAACTTCATGGTGTCGACCTACACCACC
CTGACGCAAGGGAGGCTGCACACCTTGTTGACTTCTAATTTCAGTCACAG
CAACCTGTGGAACGGGGCGATATTTTCCTATATGCTATACTCGTTGGGGC
CGACGGCCATCCAGCACCTGGGCAGGCGGCAGTTCCTGGCACTCTACCTC
TTGGGCGGGGCTTTCTCTCAGCCAACCTGTGGAACGGGGCGATATTTTCC
TATATGCTATACTCGTTGGGGCCGACGGCCATCCAGCACCTGGGCAGGCG
GCAGTTCCTGGCACTCTACCTCTTGGGCGGGGCTTTCTCTCAGCTTTGCC
AGGTGGCAGGACCAGGGATTGCTCGACGGCTGGGCTTCCCCACTGTCCTT
CAGTTTGCCAGGTGGCAGGACCAGGGATTGCTCGACGGCTGGGCTTCCCC
ACTGTCCTTCAGGTCGACCCATACTTCATAAGCTCTGGAGGATCTGGGGC
GACGCTGGCCCTCCTCGCGTGGTACTGCGCGAGTTTCCCCGGCAGGTCGA
CCCATACTTCATAAGCTCTGGAGGATCTGGGGCGACGCTGGCCCTCCTCG
CGTGGTACTGCGCGAGTTTCCCCGGCAGTCAAATAATCCTGTTGGTGGTG
CCGGTGCAAACCGGTGTCGCCGGAGCGCTGTACCTCGGGGCGACGCTGTA
CCAAGTTGCTACCAACGGAGATACCGTGCCGTTCCTGGGGGGGCCCACGC
AAGAGATCTGGCGAACCCTCGGAGCGGTTGCCGCAGGAGTCGCGATGGCG
GTTGTGTCCCGCGGTCGGGGCGGCGGGCGTTACAAGTTCATACAGAGATA
TTAATCAAATAATCCTGTTGGTGGTGCCGGTGCAAACCGGTGTCGCCGGA
GCGCTGTACCTCGGGGCGACGCTGTACCAAGTTGCTACCAACGGAGATAC
CGTGCCGTTCCTGGGGGGGCCCACGCAAGAGATCTGGCGAACCCTCGGAG
CGGTTGCCGCAGGAGTCGCGATGGCGGTTGTGTCCCGCGGTCGGGGCGGC
GGGCGTTACAAGTTCATACAGAGATATTAA
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