mRNA_H-canaliculatus_F_contig13122.2582.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13122.2582.1
Unique NamemRNA_H-canaliculatus_F_contig13122.2582.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: D8LP59_ECTSI (N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP59_ECTSI)

HSP 1 Score: 794 bits (2050), Expect = 8.140e-282
Identity = 407/615 (66.18%), Postives = 491/615 (79.84%), Query Frame = 1
Query:    1 EHIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAFTNKKRGKSNEQLRPEWRQVLEDLLPEYRALFETLRSTRPPPKNXXXXXKTEEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQPSIKPSKTKEGFVSQQHLLLAVPRPSWFDDVAEMSKKDASKLLRDVSNVRKEMWKVMREPGTENPLKSFSLLPHFSLTRAFVKYDDESIGILAKSLLITGEGPN---LKTEGVASAGRSKRLWWSGIFDFHTERVCKRRPKTRKRPTSGRRKVLRAKNRFTKGIGACRKDPWFTDELLYTAKREDPACTTPWLVNSISTDGLQVKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKLSNKEKSALST-ENSIEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSFKGSKASFSSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAYDPVSLKQPGLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGMARDIAYGNSYKKEVRRTQRSSGKQMAPERKKELLQKIRDKRRVVFFGNGQFGHGARGPCPRKALVRA 1833
            +H++C LERRLW  RDD+HFW N+  AA ++Y +AGQKT E+AL +I  F ++KRG   E LRPEW + +E LL EYR LFE LR  RPPPK+     KTEE++TG EDFLYNV+A+LNDVL+IEA  R+ DF+LR+RRGEIWSEI ERQ SIK SKTKEGF+ Q+HLL  +P P WFD+  +MSKKDAS L+RDV N RK+MWK MREPGTE+P K+FSL+PHFSLTRAFV+YD +SIG LAKSL   G   N   LKT GV  +G+++RLWW+GIFDFH+ER+  RRP T K  T   RKVLR  NR+ KGIG C KDPWFTDE+LY+AKR+DP+C TPW+VNSISTDGLQVKVCLATLAKT PLP+G+KELVKKGY+S+ D  L +S+  KGVF +A  L   EKS LS+ +N IEVVGLDPGQVS+YATVRAN+     TS + F +S FKGS++S SSREY HQSL+RFSAKAE  RR  +V YGQA++A+D VSLKQPG S AY+ V Y TL VR+ ELLS+ RRL++FARLRARQR VDGMARDIA+GN+YK+EVR+ QRSS + ++PER+KELL+KIRDK+RVVFFGNGQFGHGARG CPRKAL+RA
Sbjct:    2 DHLSCRLERRLWECRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSEKELLRPEWGEAMEHLLSEYRGLFEPLRVKRPPPKDPPEHPKTEEELTGREDFLYNVKARLNDVLRIEAGCRKVDFHLRKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGIKMSKKDASNLVRDVRNTRKDMWKSMREPGTEDPPKAFSLMPHFSLTRAFVRYDSQSIGTLAKSLDFPGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPSTEKNQTQRTRKVLRLNNRYRKGIGVCNKDPWFTDEVLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDK-LRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANI-----TSPKTFEASEFKGSQSSISSREYKHQSLTRFSAKAEVGRRLDHVEYGQAVQAFDSVSLKQPGSSVAYSSVIYCTLRVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYKQEVRKEQRSSAEPLSPERRKELLKKIRDKKRVVFFGNGQFGHGARGACPRKALIRA 610          
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: A0A6H5KAA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA5_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 1.110e-81
Identity = 136/233 (58.37%), Postives = 167/233 (71.67%), Query Frame = 1
Query:    1 EHIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAFTNKKRGKSNEQLRPEWRQVLEDLLPEYRALFETLRSTRPPPKNXXXXXKTEEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQPSIKPSKTKEGFVSQQHLLLAVPRPSWFDDVAEMSKKDASKLLRDVSNVRKEMWKVMREPGTENPLKSFSLLPHFSLTRAFVK 699
            +H++C LERRLW FRDD+HFW N+  AA ++Y +AGQKT E+AL +I  F ++KRG  NE LRPEW + +EDLL EYR LFE LR+ RPPPKN     KTEE++TG EDFLYNV+A LNDVL+IEA  R+ DF+L++RRGEIWSEI ERQ SIK       F+  +   +            EMSKKDAS L+RDV N RK+MWK MREPGTE+P K+FSL+PHFSLT    K
Sbjct:   19 DHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENELLRPEWGEAMEDLLSEYRGLFEPLRAKRPPPKNPPEHPKTEEELTGREDFLYNVKAMLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIK------SFIQDERGGI------------EMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTTQVAK 233          
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.220e-63
Identity = 209/647 (32.30%), Postives = 303/647 (46.83%), Query Frame = 1
Query:    1 EHIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAFTNKKRGKSNEQ-LRPEWRQVLEDLLPEYRALFETLRSTRPPPKNXXXXX------KTEEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQPSIKPSKTKEGFVSQQHLLLAVPRPSWF-----DDVAEMSKKDASKLLRDVSNVRKEMWKVMREPGTENPLKSFSLLPHFSLTRAFVKYDDESIGILAKSLLITGEGPNLKTEGVAS------------AGRSKRLWWSGIFDFHTERVCKRRPKTRKRPTSGRRKVLRAKNRFT-KGIGACRKDPWFTDELLYTAKREDPACTTPWLVNSISTDGLQVKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKLSNKEKSALSTENS---IEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSFKGSKASFSSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAYDPVSLKQPGLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGMARDIAYGNSYKKEVRRTQRSSGKQMAPERKKELLQKIRDK--------RRVVFFGNGQFGHGARGPCPRKALVRA 1833
            +H+ C LER  WS R D+HF   +   A  L  +A  +    A +M+ AF  + RG   +Q L  +W   +   L   R   +  R    PP+            + E+++  M  F  N+      VL  EA FR  D   R  +  +W+ I   QP +    TK     Q      +  P+W       D+ +  K     L R VS++R  + +  R PGT  P K F+LLP   L    +  DD  I  L+ +     E   L+ EG+ S               ++R WW  + + H ++V  R P+  +R    R K L  K +    GI       W  +  L     + P    PW VN+I+TDGLQV V LAT   T  +P G+ EL++KGY+S+ DV        +G+F  A+K+S++  SAL+ ++    IE VG+D GQ  +Y    A V S+D TS E F     K   A  S+ ++   SLS+   K E  RR  N GY  AI     VS++ PG ++AY ++ +S   V  +E LS  RR + F   RA+ R +  MA  IA  ++    +R+     G +  PE ++ LL ++RD          RVVFFGN QFGHG+RGP PRKAL+RA
Sbjct:   65 DHLMCYLERLAWSRRRDEHFAYVIKTGAKLLQRAAAVQDDAAAAAMVEAFLVRPRGSDGQQQLHEDWWAAMGSGLTYIRNRLQPFRVA--PPEGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLHTEAAFRSEDEQYRVAKELLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPAWVMENGDGDLTQEQKVQWCGLQRRVSDIRTALLEARRTPGTMFPPKRFTLLPVAELQPMMLPLDDR-IDFLSDARGTRAEWRALQQEGIRSRQVRKDWKARLTGDMTERGWWLCMLNLH-DKVGVRVPRGAERSGEARMKPLGRKGKLAWGGIRCLWGQKWTIEGDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVTAVIP-GVAELIEKGYASIKDV-YKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARV-SSD-TSPEDFK----KIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQLSSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRKI----GPE--PEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRA 689          
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA)

HSP 1 Score: 230 bits (586), Expect = 9.910e-63
Identity = 189/633 (29.86%), Postives = 293/633 (46.29%), Query Frame = 1
Query:    4 HIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAFTNKKRGKSNEQLRPEWRQVLEDLLPEYRALFETLRSTRPPPKNXXXXXKTEEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQPSIKPS-KTKEGFVSQQHLLLAVPRPSWFDDVAEMSKKDASKLLRDVSNV----RKEMWKVMREPGTENPLKSFSLLPHFSLTRAFVKYDDESIGILAKSLLITGEGPNLKTEGVASAGRSKRLWWSGIFDFHTERVCKRRPKTRKRPTSGRRKVLRAKNRFTKGIGACRKDPWFTDELLYTAK---REDPACTTPWLVNSISTDGLQVKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKLSNKEKSALSTENS---IEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSFKGSKASFSSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAY--DPVSLKQPGLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGMARDIAYGNSYKKEVRRTQRSSGKQMAP--ERKKELLQKIRDK---------RRVVFFGNGQFGHGARGPCPRKALVR 1830
            H +  +E  +W +R +  F   +  A   L+++A  +    A + +  F  + RG++   L P W   +  L  E R     LR+  P P       +  E       + +NV+   +  L ++A  R      R RRGEIW+ I E +PS++   KT+    +Q+  L     P+W D+  E+  +D ++  R +++     R  +W   +EPGT  P + +++LP F L  AF+  D   + +L K L   G G     +     GRS RLWW+  FD H     ++R + ++   + R  +        +G+   R++ W  D+  Y A    R  P    P LV  I++DG +  V L TL    P   G  ELV++GY ++    + + R  +G+F     L  +    L   +    +E +G+DPGQ  +   VR  V            ++  KGS    S REY +Q+L+  + + E  RRE N  Y  A+ +Y  D  S + P     ++   Y  L     E LS  RR   FAR RA  RA+  +ARDIA G+      R  +R S    AP   R++ELL K++++          RVVFFGNGQFG GA GP PRKAL++
Sbjct:   20 HFSWLVEIAMWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGRARVPLGPHWAAGMTSLAREEREALSHLRTPLPNPGRAIDPPQLRE-------YRFNVKNFPHLCLDVKARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLREAEAPAWLDEGPELLTRDEAREWRALASASWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFILIDANVLSVLGKKLR-KGAGA---ADDALRTGRSDRLWWTKAFDLHGRGTTEQRGQAKRGRRARRAVIXXXXXXXRRGLRILRREGWVLDDSAYEAAKGGRRPP----PHLVRCITSDGERCHVTLQTLVAARPA--GAAELVREGYDAIRGTCV-VGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVTRRT-------EAADLKGSDRCISGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSPRRRELLAKVQERLAGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLK 627          
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA)

HSP 1 Score: 218 bits (555), Expect = 6.910e-58
Identity = 202/665 (30.38%), Postives = 304/665 (45.71%), Query Frame = 1
Query:    1 EHIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAFTNKKRGKSNEQ-LRPEWRQVLEDLLPEYRALFETLRSTRPP-----PKNXXXXXKTEEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQPSIKPSKTKEGFVSQQHLLLAVPRPSWFDD----VAEMSKKDASKLLRDVSNVRKEMWKVMREPGTENPLKSFSLLPHFSLTRAFVKYDDE---SIGILA-------------KSLLITGEGPNLKTEGVASAGRSKRL-----------------WWSGIFDFHTERVCKRRPKTRKRPTSGRRKVLRAKNRFTKGIGACRKDPWFTDELLYTAKREDPACTTPWLVNSISTDGLQVKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKLSNKEKSALSTENS---IEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSFKGSKASFSSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAYDPVSLKQPGLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGMARDIAYGNSYKKEVRRTQRSSGKQMAPERKKELLQKIRDK--------RRVVFFGNGQFGHGARGPCPRKALVRA 1833
            +H+ C LER  W  R+  HF   +   A  L  +   +  + A++M+  F  + RG+  +Q L  +WR  +E  L   R      R   P        + XXXX   EQ+  M  F  N+    + VL+ EA FR  D   R  +  +W+ I   QP +    TKE    Q      +  P+W  D    ++   K +   L+R +S  R+ M    R PGT  P K F+LLP   L    +  D     SI  LA             K  + TG G + + + +       R+                 WW  +F+ H E+V  R P+  +      + + R       GI       W  ++ L     + P    PW VN+I+TDGLQV V LAT    +P+  G+ +LVKKGY+S+ +V  + +   +G+F  A K+S +  SA++ ++    +E+VG+DPGQ  +Y    A V S   +S E F +       AS S+ ++   SLS+     +  RR  N+ Y  AI     VS++ PG ++AYA+  ++       E LS GRR + F   RA+ R +  MAR+I   +S    +R+    S ++ A      LL ++RD+         RV FFGN QFGHG+RGP PRKAL+RA
Sbjct:   81 DHLMCYLERLAWERRNGDHFSYVIKTGAKLLQRAGAVQEDDTAINMVEEFIVRPRGREGDQRLHEDWRGAMETALKYVRDRLSPFRVIPPGGFGRVQVDDXXXXXXXEQLDEMGAFFKNIYRNKSLVLETEAAFRSEDEQFRLAKEGLWTSINNDQPYLPQVMTKEDARKQLPAFRDIEPPAWIQDGDGPLSTDQKVEWGVLVRRISATRRTMVDSRRTPGTLFPPKRFTLLPMAELHPMMLPLDSRIVTSIVALALDNIQPSLDIPTKKHYVETGMGTSQEWKILQQKQLRSRIVRREWKARLEGGMMDSGWWLCMFNLH-EKVRLRMPRRAEVNWKPAKPLGRKGKTAWGGIRCLWGTGWTIEDDLSKHGNKKP----PWFVNNITTDGLQVNVTLATKV-VDPVIPGVADLVKKGYTSIKEV-YDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSN--SSAEDFKNIE----TASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAELSGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRKVGPESEERAA------LLSRMRDRLAGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRA 726          
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.010e-56
Identity = 197/643 (30.64%), Postives = 291/643 (45.26%), Query Frame = 1
Query:    1 EHIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAFTNKKRGKSNEQ-LRPEWRQVLEDLLPEYRALFETLRSTRPP----PKNXXXXXKTEEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQPSIKPSKTKEGFVSQQHLLLAVPRPSWFDDVAEMSKKDASK-----LLRDVSNVRKEMWKVMREPGTENPLKSFSLLPHFSLTRAFVKYDDESIGILAKSLLITGEGPNLKTEGVA-------SAGRSKRLWWSGIFDFHTERVCKRRPKTRKRPTSGRRKVLRAKNRFTKGIGACR-KDPW-FTDELLYTAKREDPACTTPWLVNSISTDGLQVKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKLSNKEKSALSTENS---IEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSFKGSKASFSSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAYDPVSLKQPGLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGMARDIAYGNSYKKEVRRTQRSSGKQMAPERKKE--LLQKIRDK--------RRVVFFGNGQFGHGARGPCPRKALVRA 1833
            +H+ C LER  W  R D HF   +   A  L  +   +    A +MI  F  + RG   +Q L  +WR  +   L   R   +  R   P      +      + E+++  M  F  N+      VL++EA FR  +   R  +  +W+ I   QP +    TK     Q      +  P W  +V +       K     L R +S++R  + +  R PGT  P K F+LLP   L    +  DD  I  + +  L   +   L +  +        +   ++R WW  +F+ H + V  R P++ +R      K L  K +   G   C     W FT++L     +       PW VN+I+TDGLQV V LAT  + E +  G+ EL++KGY+S+ DV        +G+F  A K+S++  S L+ ++    IE VG+D GQ  +Y    A  IS+D TS E F     K   A  S+ ++   SL++     E  RR  N  Y  AI     VS++ PG ++AY D  +S       E LS  RR + F   RA+ R +  MA  IA         R  + S+ +++ PE K+   LL  +RD          RVVFFGN  FGHG+RGP PRKAL+RA
Sbjct:   64 DHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGK-VRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHK-----APPWFVNNITTDGLQVNVTLAT-KRVETVIPGVAELIEKGYTSIKDV-YEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAAR-ISSD-TSAEDFK----KIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIA--------GRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRA 684          
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.410e-52
Identity = 188/648 (29.01%), Postives = 285/648 (43.98%), Query Frame = 1
Query:    4 HIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAFTNKKRGKSNEQLRPEWRQVLEDLLPEYRALFETLRSTRPPPKNXXXXXKTEEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQPSIKPS-KTKEGFVSQQHLLLAVPRPSWFDDVAEMSKKDASKLLRDVSNV----RKEMWKVMREPGTENPLKSFSLLPHFSLTRAFVKYDDESIGILAKSLLITGEGPNLKTEGVASAGRSKRLWWSGIFDFH---TERV---CKRRPKT-----------RKRPTSGRRKVLRAKNRFTK-GIGACRKDPWFTDELLYTAK---REDPACTTPWLVNSISTDGLQVKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKLSNKEKSALSTENSIEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSFKGSKASFSSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAY--DPVSLKQPGLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGMARDIAYGNSYKKEVRRTQRSS--GKQMAPERKKELLQKIRDK---------RRVVFFGNGQFGHGARGPCPRKALVR 1830
            H++  +E   W +R +  F   +  A   L+++A  +    A + +  F  + RG++   L P W   +  L  E R     LR+  P P         E     + ++ +N++   +  L + A  R      R RRGEIW+ I E +PS++   KT+    +Q+  L     P+W D+  E+  +D  +  R +++     R  +W   +EPGT  P + +++LP F L  AFV  D E + +L   L           +G     RS RLWW+  FD H   T  +    +RR K             KR    RR V++   +  + G+   R++ W  D+  Y A    R  P    P LV  I++DG +  V L TL    P   G  ELV++GY ++    + + R  +G+F     L  +    L           D G  + +              +E   ++  KGS    S REY +QSL+  + + E  RRE N  Y  A+  Y  D  S + PG    ++   Y  L     E LS  RR   FAR RA  RA+  +ARDIA G+      R  +R S  GK     R++ELL  +R++          R+VFFGNGQFG GA G  PRKAL++
Sbjct:  193 HLSWLVEIATWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGRARLPLGPHWAAGMASLAREEREARSHLRTPLPNPGR-------ERDAPQLREYRFNIKNFPHLCLDVMARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLRGAEAPAWLDEGPELLTRDEVREWRALASAAWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFVLIDAEVLSVLGTKLRKAAGA----ADGALRTRRSDRLWWTKAFDLHGRGTREIPAEARRRGKRYVREYAEQRGQAKRGRRARRAVIKTGRKVRRSGLRILRREGWVLDDAAYEAAKGGRRPP----PHLVRCITSDGERCHVTLQTLVAARPA--GAPELVREGYDAIRGTCV-VGRDRRGLFRDVAPLPEELLDCL-----------DAGDRACF--------------VEAIGAADLKGSDRCISGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSPRRRELLANVRERLAGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLK 797          
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Match: A0A835ZC03_9STRA (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC03_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.240e-19
Identity = 113/360 (31.39%), Postives = 166/360 (46.11%), Query Frame = 1
Query:  796 SKRLWWSGIFDFHTERVCKRRPKTRKRPTSGRRKVLRAKNRFT-KGIGACRKDPWFTDELLYTAKREDPACTTPWLVNSISTDGLQVKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKLSNKEKSALSTENS---IEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSFKGSKASF-SSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAYDPVSLKQPGLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGM-ARDIAYGNSYKKEVRRTQRSSGKQMAPERKKELLQKIRDK--------RRVVFFGNGQFGHGARGPCPRKALVRA 1833
            ++R WW  + + H ++V  R P+  +R    R K L  K +    GI +     W  +  L     + P    PWLVN+I+TDGLQV V LAT  + E +  G+ EL++KGY+S+ DV        +G+F  A+K+S++  SAL+ ++    IE VG+D GQ  +Y    A  IS+D +S       +FK  + +F S+ ++   SLS+   K E          G+A                                    G   ++F       R  +G  A DI  G +         R  G +  PE ++ LL ++RD          RVVFFGN QFGHG+RGP PRKAL+RA
Sbjct:   70 TERGWWLCMLNLH-DKVRVRVPRGAERSGEARMKPLGRKGKLAWGGIRSLWGQRWTIEGDLREYGHKAP----PWLVNNITTDGLQVNVTLAT-KRVETVIPGVAELIEKGYTSINDV-YKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAAR-ISSDTSS------ENFKKIQPAFRSASDHKFLSLSKAWRKFE----------GEAFL----------------------------------GEETQKF-------RCQEGEDAGDIEDGGTAA-----ALRKIGPE--PEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRA 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13122.2582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LP59_ECTSI8.140e-28266.18N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KAA5_9PHAE1.110e-8158.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYB9_9STRA2.220e-6332.30Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CCX3_9STRA9.910e-6329.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z394_9STRA6.910e-5830.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYX5_9STRA1.010e-5630.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC24_9STRA2.410e-5229.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC03_9STRA2.240e-1931.39OrfB_Zn_ribbon domain-containing protein n=1 Tax=T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13122contigH-canaliculatus_F_contig13122:1462..3294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1833
Cds size1833
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929050.6425533-CDS-H-canaliculatus_F_contig13122:1461..32941622929050.6425533-CDS-H-canaliculatus_F_contig13122:1461..3294Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13122 1462..3294 +
1696845660.8014274-CDS-H-canaliculatus_F_contig13122:1461..32941696845660.8014274-CDS-H-canaliculatus_F_contig13122:1461..3294Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13122 1462..3294 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13122.2582.1prot_H-canaliculatus_F_contig13122.2582.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13122 1462..3294 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13122.2582.1

>prot_H-canaliculatus_F_contig13122.2582.1 ID=prot_H-canaliculatus_F_contig13122.2582.1|Name=mRNA_H-canaliculatus_F_contig13122.2582.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=611bp
EHIACELERRLWSFRDDQHFWKNLSGAANRLYVSAGQKTLEKALSMIHAF
TNKKRGKSNEQLRPEWRQVLEDLLPEYRALFETLRSTRPPPKNPPKNPKT
EEQMTGMEDFLYNVRAKLNDVLKIEAIFRESDFNLRQRRGEIWSEIFERQ
PSIKPSKTKEGFVSQQHLLLAVPRPSWFDDVAEMSKKDASKLLRDVSNVR
KEMWKVMREPGTENPLKSFSLLPHFSLTRAFVKYDDESIGILAKSLLITG
EGPNLKTEGVASAGRSKRLWWSGIFDFHTERVCKRRPKTRKRPTSGRRKV
LRAKNRFTKGIGACRKDPWFTDELLYTAKREDPACTTPWLVNSISTDGLQ
VKVCLATLAKTEPLPRGIKELVKKGYSSLPDVGLNLSRFPKGVFSKAKKL
SNKEKSALSTENSIEVVGLDPGQVSIYATVRANVISADVTSLEGFTSSSF
KGSKASFSSREYSHQSLSRFSAKAETRRREQNVGYGQAIRAYDPVSLKQP
GLSSAYADVTYSTLSVRINELLSKGRRLERFARLRARQRAVDGMARDIAY
GNSYKKEVRRTQRSSGKQMAPERKKELLQKIRDKRRVVFFGNGQFGHGAR
GPCPRKALVRA
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mRNA from alignment at H-canaliculatus_F_contig13122:1462..3294+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13122.2582.1 ID=mRNA_H-canaliculatus_F_contig13122.2582.1|Name=mRNA_H-canaliculatus_F_contig13122.2582.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1833bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13122:1462..3294+ (Hapterophycus canaliculatus Oshoro5f female)
GAGCACATCGCATGCGAGCTGGAGAGAAGACTGTGGTCGTTCCGTGATGA TCAACACTTCTGGAAAAACCTCTCAGGAGCGGCCAATCGACTGTACGTGA GTGCTGGACAGAAGACTCTGGAAAAAGCTTTGTCCATGATACACGCCTTC ACGAACAAGAAGAGAGGGAAAAGCAATGAACAGCTTCGTCCCGAGTGGAG ACAGGTTTTGGAAGACCTTCTGCCGGAGTACAGAGCTCTCTTCGAAACCC TGCGTTCGACAAGGCCTCCCCCGAAAAATCCTCCGAAGAATCCAAAGACG GAGGAGCAGATGACCGGGATGGAAGACTTTTTATACAACGTCAGGGCCAA GCTGAACGATGTGCTGAAAATCGAAGCAATCTTTCGCGAGTCCGACTTCA ACCTGCGACAGAGAAGAGGCGAGATTTGGTCCGAGATCTTTGAGAGACAG CCGTCCATCAAGCCGTCCAAGACCAAAGAGGGGTTTGTGAGTCAGCAGCA TCTTCTTCTGGCCGTACCGAGACCCTCTTGGTTCGACGACGTCGCAGAAA TGAGCAAGAAAGACGCGTCAAAGCTGCTTAGAGACGTTTCGAACGTTCGG AAAGAGATGTGGAAGGTCATGAGAGAACCAGGGACGGAAAACCCTCTCAA GTCTTTCTCTCTGCTTCCACACTTCTCTCTGACAAGAGCTTTCGTCAAGT ACGACGACGAGAGCATCGGCATCCTGGCCAAGTCCCTTCTTATCACAGGG GAAGGTCCCAACTTGAAGACGGAGGGGGTGGCCAGTGCCGGACGATCCAA GAGACTCTGGTGGTCAGGAATCTTCGATTTTCACACGGAGAGAGTCTGCA AGAGACGCCCGAAAACCCGGAAACGCCCTACGAGTGGGCGGCGCAAAGTT CTTCGCGCCAAGAACCGCTTCACGAAAGGAATTGGTGCGTGCAGGAAAGA TCCTTGGTTCACCGACGAGCTTCTCTACACAGCCAAGAGAGAGGACCCCG CCTGTACAACACCATGGCTCGTCAATTCCATTTCAACAGATGGTCTTCAG GTCAAGGTCTGCCTAGCTACTCTCGCCAAGACCGAGCCTCTACCCCGAGG AATCAAAGAACTTGTGAAGAAGGGATATTCTAGTCTGCCCGACGTCGGTC TCAACCTCTCCAGGTTTCCAAAGGGTGTCTTCAGTAAGGCCAAGAAGCTG AGCAACAAGGAAAAATCCGCGCTGTCTACCGAAAACAGCATCGAGGTCGT CGGTCTTGATCCTGGACAAGTGTCTATCTACGCGACAGTGAGGGCAAACG TAATATCCGCGGACGTTACATCTCTGGAGGGGTTCACCTCTTCTTCGTTC AAGGGTTCAAAAGCTTCGTTTTCCTCCCGTGAGTACAGCCACCAGTCTCT CTCTAGATTCAGTGCAAAGGCGGAGACTAGACGCAGGGAGCAGAATGTTG GATACGGACAAGCTATTCGAGCCTATGACCCCGTGTCGTTGAAGCAACCT GGTCTTTCTTCGGCATATGCTGATGTGACCTATTCGACGCTCAGTGTAAG GATCAACGAACTTCTATCAAAGGGGCGAAGACTAGAGAGGTTTGCAAGGC TTCGAGCGAGACAACGTGCCGTTGATGGAATGGCGAGAGATATCGCTTAC GGAAATTCGTACAAAAAAGAGGTGCGGAGGACACAGCGATCTTCGGGCAA GCAAATGGCTCCAGAGAGGAAGAAAGAGTTGCTTCAGAAGATTCGAGACA AGCGAAGGGTCGTTTTCTTCGGGAATGGTCAGTTTGGTCATGGTGCGAGG GGACCGTGTCCAAGAAAGGCATTGGTTAGAGCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13122:1462..3294+

>mRNA_H-canaliculatus_F_contig13122.2582.1 ID=mRNA_H-canaliculatus_F_contig13122.2582.1|Name=mRNA_H-canaliculatus_F_contig13122.2582.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3666bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13122:1462..3294+ (Hapterophycus canaliculatus Oshoro5f female)
GAGCACATCGCATGCGAGCTGGAGAGAAGACTGTGGTCGTTCCGTGATGA
TCAACACTTCTGGAAAAACCTCTCAGGAGCGGCCAATCGACTGTACGTGA
GTGCTGGACAGAAGACTCTGGAAAAAGCTTTGTCCATGATACACGCCTTC
ACGAACAAGAAGAGAGGGAAAAGCAATGAACAGCTTCGTCCCGAGTGGAG
ACAGGTTTTGGAAGACCTTCTGCCGGAGTACAGAGCTCTCTTCGAAACCC
TGCGTTCGACAAGGCCTCCCCCGAAAAATCCTCCGAAGAATCCAAAGACG
GAGGAGCAGATGACCGGGATGGAAGACTTTTTATACAACGTCAGGGCCAA
GCTGAACGATGTGCTGAAAATCGAAGCAATCTTTCGCGAGTCCGACTTCA
ACCTGCGACAGAGAAGAGGCGAGATTTGGTCCGAGATCTTTGAGAGACAG
CCGTCCATCAAGCCGTCCAAGACCAAAGAGGGGTTTGTGAGTCAGCAGCA
TCTTCTTCTGGCCGTACCGAGACCCTCTTGGTTCGACGACGTCGCAGAAA
TGAGCAAGAAAGACGCGTCAAAGCTGCTTAGAGACGTTTCGAACGTTCGG
AAAGAGATGTGGAAGGTCATGAGAGAACCAGGGACGGAAAACCCTCTCAA
GTCTTTCTCTCTGCTTCCACACTTCTCTCTGACAAGAGCTTTCGTCAAGT
ACGACGACGAGAGCATCGGCATCCTGGCCAAGTCCCTTCTTATCACAGGG
GAAGGTCCCAACTTGAAGACGGAGGGGGTGGCCAGTGCCGGACGATCCAA
GAGACTCTGGTGGTCAGGAATCTTCGATTTTCACACGGAGAGAGTCTGCA
AGAGACGCCCGAAAACCCGGAAACGCCCTACGAGTGGGCGGCGCAAAGTT
CTTCGCGCCAAGAACCGCTTCACGAAAGGAATTGGTGCGTGCAGGAAAGA
TCCTTGGTTCACCGACGAGCTTCTCTACACAGCCAAGAGAGAGGACCCCG
CCTGTACAACACCATGGCTCGTCAATTCCATTTCAACAGATGGTCTTCAG
GTCAAGGTCTGCCTAGCTACTCTCGCCAAGACCGAGCCTCTACCCCGAGG
AATCAAAGAACTTGTGAAGAAGGGATATTCTAGTCTGCCCGACGTCGGTC
TCAACCTCTCCAGGTTTCCAAAGGGTGTCTTCAGTAAGGCCAAGAAGCTG
AGCAACAAGGAAAAATCCGCGCTGTCTACCGAAAACAGCATCGAGGTCGT
CGGTCTTGATCCTGGACAAGTGTCTATCTACGCGACAGTGAGGGCAAACG
TAATATCCGCGGACGTTACATCTCTGGAGGGGTTCACCTCTTCTTCGTTC
AAGGGTTCAAAAGCTTCGTTTTCCTCCCGTGAGTACAGCCACCAGTCTCT
CTCTAGATTCAGTGCAAAGGCGGAGACTAGACGCAGGGAGCAGAATGTTG
GATACGGACAAGCTATTCGAGCCTATGACCCCGTGTCGTTGAAGCAACCT
GGTCTTTCTTCGGCATATGCTGATGTGACCTATTCGACGCTCAGTGTAAG
GATCAACGAACTTCTATCAAAGGGGCGAAGACTAGAGAGGTTTGCAAGGC
TTCGAGCGAGACAACGTGCCGTTGATGGAATGGCGAGAGATATCGCTTAC
GGAAATTCGTACAAAAAAGAGGTGCGGAGGACACAGCGATCTTCGGGCAA
GCAAATGGCTCCAGAGAGGAAGAAAGAGTTGCTTCAGAAGATTCGAGACA
AGCGAAGGGTCGTTTTCTTCGGGAATGGTCAGTTTGGTCATGGTGCGAGG
GGACCGTGTCCAAGAAAGGCATTGGTTAGAGCTGAGCACATCGCATGCGA
GCTGGAGAGAAGACTGTGGTCGTTCCGTGATGATCAACACTTCTGGAAAA
ACCTCTCAGGAGCGGCCAATCGACTGTACGTGAGTGCTGGACAGAAGACT
CTGGAAAAAGCTTTGTCCATGATACACGCCTTCACGAACAAGAAGAGAGG
GAAAAGCAATGAACAGCTTCGTCCCGAGTGGAGACAGGTTTTGGAAGACC
TTCTGCCGGAGTACAGAGCTCTCTTCGAAACCCTGCGTTCGACAAGGCCT
CCCCCGAAAAATCCTCCGAAGAATCCAAAGACGGAGGAGCAGATGACCGG
GATGGAAGACTTTTTATACAACGTCAGGGCCAAGCTGAACGATGTGCTGA
AAATCGAAGCAATCTTTCGCGAGTCCGACTTCAACCTGCGACAGAGAAGA
GGCGAGATTTGGTCCGAGATCTTTGAGAGACAGCCGTCCATCAAGCCGTC
CAAGACCAAAGAGGGGTTTGTGAGTCAGCAGCATCTTCTTCTGGCCGTAC
CGAGACCCTCTTGGTTCGACGACGTCGCAGAAATGAGCAAGAAAGACGCG
TCAAAGCTGCTTAGAGACGTTTCGAACGTTCGGAAAGAGATGTGGAAGGT
CATGAGAGAACCAGGGACGGAAAACCCTCTCAAGTCTTTCTCTCTGCTTC
CACACTTCTCTCTGACAAGAGCTTTCGTCAAGTACGACGACGAGAGCATC
GGCATCCTGGCCAAGTCCCTTCTTATCACAGGGGAAGGTCCCAACTTGAA
GACGGAGGGGGTGGCCAGTGCCGGACGATCCAAGAGACTCTGGTGGTCAG
GAATCTTCGATTTTCACACGGAGAGAGTCTGCAAGAGACGCCCGAAAACC
CGGAAACGCCCTACGAGTGGGCGGCGCAAAGTTCTTCGCGCCAAGAACCG
CTTCACGAAAGGAATTGGTGCGTGCAGGAAAGATCCTTGGTTCACCGACG
AGCTTCTCTACACAGCCAAGAGAGAGGACCCCGCCTGTACAACACCATGG
CTCGTCAATTCCATTTCAACAGATGGTCTTCAGGTCAAGGTCTGCCTAGC
TACTCTCGCCAAGACCGAGCCTCTACCCCGAGGAATCAAAGAACTTGTGA
AGAAGGGATATTCTAGTCTGCCCGACGTCGGTCTCAACCTCTCCAGGTTT
CCAAAGGGTGTCTTCAGTAAGGCCAAGAAGCTGAGCAACAAGGAAAAATC
CGCGCTGTCTACCGAAAACAGCATCGAGGTCGTCGGTCTTGATCCTGGAC
AAGTGTCTATCTACGCGACAGTGAGGGCAAACGTAATATCCGCGGACGTT
ACATCTCTGGAGGGGTTCACCTCTTCTTCGTTCAAGGGTTCAAAAGCTTC
GTTTTCCTCCCGTGAGTACAGCCACCAGTCTCTCTCTAGATTCAGTGCAA
AGGCGGAGACTAGACGCAGGGAGCAGAATGTTGGATACGGACAAGCTATT
CGAGCCTATGACCCCGTGTCGTTGAAGCAACCTGGTCTTTCTTCGGCATA
TGCTGATGTGACCTATTCGACGCTCAGTGTAAGGATCAACGAACTTCTAT
CAAAGGGGCGAAGACTAGAGAGGTTTGCAAGGCTTCGAGCGAGACAACGT
GCCGTTGATGGAATGGCGAGAGATATCGCTTACGGAAATTCGTACAAAAA
AGAGGTGCGGAGGACACAGCGATCTTCGGGCAAGCAAATGGCTCCAGAGA
GGAAGAAAGAGTTGCTTCAGAAGATTCGAGACAAGCGAAGGGTCGTTTTC
TTCGGGAATGGTCAGTTTGGTCATGGTGCGAGGGGACCGTGTCCAAGAAA
GGCATTGGTTAGAGCT
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