mRNA_H-canaliculatus_F_contig131.2556.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig131.2556.1 vs. uniprot
Match: D7FQ32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ32_ECTSI) HSP 1 Score: 894 bits (2309), Expect = 2.480e-311 Identity = 561/793 (70.74%), Postives = 635/793 (80.08%), Query Frame = 2
Query: 50 VAVMVGDRRGVKKYINAGGDLEEKDEDGATALFHAAFWTHVEIAQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRQCEGTGVDRQQD-EXXXXXXXXXGPRRSAAVSETPSAGDESTVVGDP-VHDQDAEYTSGKSPSRPSDGRSAAASNSPRTTRNRSGAHNGDGGTHARADQGLDAASNKAHFRVAYPPNITGGGKWHSMTAYIFEPSAHRAVRHAHQARINGDQHHPFASSDGENDVEDCDKAIPPGTHIVCRPRFPRTCCVSPANSTVVWMKDAHAVPFEVRPPASITSGTVTGCVDFYVGAVLIGQANIEMAVVKPSGSSDADEKSDVLGPVAKVFDTMYACFAAADETLLLPSFDHFNGLGIAKVVWRPGGGKDEKETKRLIRESSVFQICWSDSAKESDWVRNEVKYAGSLAKTGSLAVRGIYWNPAMAVTSIQTSHGLVFPVRLHNSFLLEEPCVLVLDGASPAVT----TADGARSGRGHRGEAEAGIGYEDARHEVAQVPDAEKLCTSAVEHTRGHIARLREMVGGADVVDVPRLVWIYPDDSGGKSGSVDIKTDDWLKKHIRVSFLCPVSMKPGRCGEDGKGYKMSLPRGWSGKIGVALKIGVLVIAAASDAGEVAGLPAPSAAAITAWREEDGAEGKSSAEKQGDLVNAAFDALAGALADKSNDLVDSAFIDAETKGSSAPSMSAHLCKEAKQSFTNLRSLL-QKYDKGLKMTGLVKVTYKGVGG 2407
+AVMVGDRR VKK+IN GDL+EKD+DGATALFHAAFWTHVEIA+DL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TPRQCEGTGVDRQ D E XXXXXGPR S AVSE PSAGDESTVVGDP V D+DA ++SGKSP+RP D RSAAAS+SPRT+RNRSGAH GD G RA + +DAAS +AHFR AY P I GGGKWH MTAY+FEPSAH AVR+AHQARI+GDQHHPF SD N VEDCDK IPPGT +V RPRFPRTCCVSP NSTVVWMKD HAVPFEVRPPAS +SGT++G VDFY+GAVLIGQA++EM+VVKP+ SS A +K DVLGPVAK FDTMY CFAAAD+ LL+PS + FN LGI +VWRP G +EK+TKRLIRESS+FQICWS SAKESD VR+EVKYA SLAK GSLAVRGIYW+ M VTSIQT+HGL+FPVR+HNSFLLEE C +LD A+ + TA GA +G G E + D VP+ EKL T+AV+HTRGH++RLR+MVGGA+ VD PRL WIYPDDSG K SVDI TD+WLKK IR+ FLCP+SMKPG CG+DG+GYK+SLPRGW KIG+ALKIGV+V+AAASDA EVAGLP P +A+++W EDG GKS + QGDLVNAAFD LAGA+ DK NDL+DS F+DAET+ S+ P+ +A LCKE KQS+ NL SLL QKYDK K VK+ Y G GG
Sbjct: 1 MAVMVGDRRAVKKFINGSGDLDEKDDDGATALFHAAFWTHVEIAKDLISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGASSEVLNHMGQTPRQCEGTGVDRQPDGENFDDXXXXXGPRGSGAVSEAPSAGDESTVVGDPGVQDRDAGFSSGKSPNRPHDERSAAASSSPRTSRNRSGAHAGDTG---RAKENVDAASTRAHFRAAYRPTIRGGGKWHPMTAYLFEPSAHSAVRNAHQARIDGDQHHPFVDSDNGNAVEDCDKTIPPGTQVVVRPRFPRTCCVSPVNSTVVWMKDVHAVPFEVRPPASTSSGTISGYVDFYIGAVLIGQAHVEMSVVKPNDSSGAADKPDVLGPVAKAFDTMYVCFAAADKPLLIPSLEWFNRLGIFNIVWRPEDG-NEKDTKRLIRESSIFQICWSMSAKESDRVRHEVKYASSLAKAGSLAVRGIYWDSTMDVTSIQTAHGLMFPVRMHNSFLLEEACAFLLDRAADTASSTPETATGALAGGGQSARVEDDGDHNDG---AVAVPNVEKLNTAAVQHTRGHVSRLRDMVGGANEVDCPRLAWIYPDDSG-KPRSVDITTDEWLKKPIRLVFLCPISMKPGWCGQDGRGYKISLPRGWGSKIGMALKIGVVVVAAASDADEVAGLPLPPVSAVSSWG-EDGEGGKSLTQMQGDLVNAAFDGLAGAVPDKWNDLIDSTFMDAETETSARPA-TAQLCKEVKQSYKNLSSLLHQKYDKVCK----VKI-YTGTGG 778
BLAST of mRNA_H-canaliculatus_F_contig131.2556.1 vs. uniprot
Match: A0A6H5JCB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCB7_9PHAE) HSP 1 Score: 219 bits (557), Expect = 1.580e-61 Identity = 141/226 (62.39%), Postives = 164/226 (72.57%), Query Frame = 2
Query: 2021 VALKIGVLVIAAASDAGEVAGLPAPSAAAITAWREEDGAEGKSSAEKQGDLVNAAFDALAGALADKSNDLVDSAFIDAETKGSSAPSMSAHLCKEAKQSFTNLRSLL-QKYDKGLKMTGLVKVTYKGVGGKPPATEWVHPSVAELFRQEGPSAFSSGALAAADADAARFARGKNSCRPTRSGGSVGNGGEGSKSHDQSQAVMSTIRLLEKQVLAMAEEGGSGSGGA 2695
+ALKIGV+V+AAASDA EVAGLP P A A+++W EDG GKS + QGDLVNAAFD LAGA+ DKSNDL+DS F++AET+ +SAP +A LCKE KQS+ NL SLL QKYDKGL+ KVTY G G P TEWVHPSVAELFR +GPS F +GALA ADADAAR A ++ + RS +GG S D VMST+RLLEKQVLAMA G GSGGA
Sbjct: 1 MALKIGVVVVAAASDADEVAGLPLPPATAVSSWG-EDGEGGKSLTQMQGDLVNAAFDGLAGAVPDKSNDLIDSIFMNAETE-TSAPPATAQLCKEVKQSYKNLSSLLHQKYDKGLE-----KVTYAGSRGTSPTTEWVHPSVAELFRSQGPSVFGAGALATADADAAREAVRRHKEQKKRSS----DGGNRPGSED----VMSTLRLLEKQVLAMAGGGARGSGGA 211
BLAST of mRNA_H-canaliculatus_F_contig131.2556.1 vs. uniprot
Match: A0A2N9MAA0_9BACT (TIR domain-containing protein n=1 Tax=Candidatus Sulfopaludibacter sp. SbA6 TaxID=2043166 RepID=A0A2N9MAA0_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 8.480e-11 Identity = 65/276 (23.55%), Postives = 122/276 (44.20%), Query Frame = 2
Query: 740 DAASNKAHFRVAYPPNITGGGKWHSMTAYIFEPSAHRAVRHAHQARINGDQHHPFASSDGENDVEDCDKAIPPGTHIVCRPRFPRTCCVSPANSTVVWMKDAHAVPFEVR----PPASITSGTVTGCVDFYVGAVLIGQANIEMAVVKPSGSSDADEKSDVLGPVAKV-FDTMYACFAAADETLLLPSFDHFNGLG---IAKVVWRPGGGKDEKETKRLIRESSVFQICWSDSAKESDWVRNEVKYAGSLAKTGSLAVRGIYWNPAMAVTSIQTSH 1543
+ A+ + F V +P ++T WH + AYI ++ V R+ HH A G V + GT I P P C +P + ++ ++D H F V+ P +TG V F+ +VLIG+ I V S +D +D + ++ +++++ ++ DE+++ + LG + + G + LI ++ +FQ+ WSD+A++S +V E ++A + A+ +R +YW M + +H
Sbjct: 194 ELAAARVRFTVYHPSDLTPE-TWHRLLAYIHTEASDADVEADSLQRLGRMDHHRKAR--GAATVP-----LLRGTEITVIPELPG-CVFNPRSLNLLLLEDLHCAEFRVQLAAGRPGFELERPLTGQVSFFAESVLIGEVPIW---VVGSAEADGGRSADSMRKSSRAGYESVFVSYSHVDESIVARVGRAYKALGMQFLRDIEVLRSGEEWNGRLLELIEQADIFQLYWSDAARDSTYVEREWRHALNQARKNF--IRPVYWMRPMPPPPAELNH 455
BLAST of mRNA_H-canaliculatus_F_contig131.2556.1 vs. uniprot
Match: A0A0M0LHJ8_9EUKA (Serine threonine kinase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LHJ8_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 8.940e-6 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 2
Query: 1817 VDVPRLVWIYPDDSGGKSGSVDIKTDDWLKKHIRVSFLCPVSMKPGRCGEDGKGYKMSLPRGWSGKIGVALKIGVLVIAAASDAGEVAGLPAPSAAAI 2110
+D PRL + P + S + + ++LK R+ FL PV+ RCG DG+GYK+ +P+ W + V + G+ ++ + + AG +AGLP PSAA +
Sbjct: 542 LDCPRLFVLLPMQASS-SKLMQLVKREFLKDKYRLVFLDPVTGCAVRCGPDGEGYKLEVPKKWLVENRVIISAGLHIVKSCAMAGRLAGLPLPSAAGL 638
BLAST of mRNA_H-canaliculatus_F_contig131.2556.1 vs. uniprot
Match: A0A0M0JDW7_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JDW7_9EUKA) HSP 1 Score: 57.4 bits (137), Expect = 5.230e-5 Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = 2
Query: 1817 VDVPRLVWIYPDDSGGKSGSVDIKTDDWLKKHIRVSFLCPVSMKPGRCGEDGKGYKMSLPRGWSGKIGVALKIGVLVIAAASDAGEVAGLPAPSAAAI 2110
+D PRL + P ++ IK + ++K R+ FL PV+ RCG DG GYK+ +P+ W + V + + ++ + + AG +AGLP PSAA +
Sbjct: 16 LDCPRLFVLLPMEASSSKLMQLIKRE-FVKDKYRLVFLDPVTGCAVRCGPDGDGYKLEVPKKWLVENRVIVSAALHIVKSCAMAGRLAGLPLPSAAGL 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig131.2556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig131.2556.1 >prot_H-canaliculatus_F_contig131.2556.1 ID=prot_H-canaliculatus_F_contig131.2556.1|Name=mRNA_H-canaliculatus_F_contig131.2556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=890bp MGDVDLQVAVMVGDRRGVKKYINAGGDLEEKDEDGATALFHAAFWTHVEIback to top mRNA from alignment at H-canaliculatus_F_contig131:19046..28268- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig131.2556.1 ID=mRNA_H-canaliculatus_F_contig131.2556.1|Name=mRNA_H-canaliculatus_F_contig131.2556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9223bp|location=Sequence derived from alignment at H-canaliculatus_F_contig131:19046..28268- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig131:19046..28268- >mRNA_H-canaliculatus_F_contig131.2556.1 ID=mRNA_H-canaliculatus_F_contig131.2556.1|Name=mRNA_H-canaliculatus_F_contig131.2556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5340bp|location=Sequence derived from alignment at H-canaliculatus_F_contig131:19046..28268- (Hapterophycus canaliculatus Oshoro5f female)back to top |