mRNA_H-canaliculatus_F_contig1309.2547.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1309.2547.1 vs. uniprot
Match: D7G3T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T2_ECTSI) HSP 1 Score: 311 bits (798), Expect = 1.090e-103 Identity = 174/268 (64.93%), Postives = 205/268 (76.49%), Query Frame = 1
Query: 4 RHQNEAAAELLSVALTSSGLENVLSGLTSRVNALESTNKAQQHQREALKQQAPDIEISKKHLCETSAIQSLSTKSPEKQLATMAEAIVNMGQNINQFYKDVKYREAVQQATDAAQDELMQMELDGLKREVSVKFTRQDGLDMRKMIASEMRGMREEMEQQFAGKLSTVHDEVSXXLSLVMDHMRAIQETTSTTHELLKYRIEEAFTDIQNASEDMDAKLRKITEMFGLSNDPTDNDTPSLPEMLRSISDLQKFFYDCRDGLDIQTVRS 807
+HQ AAAELL+VALTSSGLE+VLS LT RVN LES NKAQ+H+ E L Q P+++IS KHLCETSA+Q+L+ KSPE+QL M++AIV++GQ++NQFYKDVKYREAVQQATDAAQDELMQMELD L EV +KFTR+D DMR+MIA EMR XX S V DH+R IQETT T+ELLKYRIEEAFTDIQ AS DMDAK+RKIT+MFGLS +P DN TPS PEMLR+I DL++ CRD +D QTVR+
Sbjct: 3 KHQQAAAAELLTVALTSSGLESVLSQLTDRVNDLESVNKAQKHRLETLAHQTPEVDISDKHLCETSALQNLAGKSPEQQLVAMSDAIVSIGQSVNQFYKDVKYREAVQQATDAAQDELMQMELDRLNGEVDIKFTRKDAQDMRRMIAKEMRAXXXXXXXXXXXXXXXXXXXXXXXXSRVTDHVRVIQETTGATNELLKYRIEEAFTDIQRASVDMDAKIRKITDMFGLSANPDDNGTPSFPEMLRNIGDLERLALGCRDDIDEQTVRA 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1309.2547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1309.2547.1 >prot_H-canaliculatus_F_contig1309.2547.1 ID=prot_H-canaliculatus_F_contig1309.2547.1|Name=mRNA_H-canaliculatus_F_contig1309.2547.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=276bp MRHQNEAAAELLSVALTSSGLENVLSGLTSRVNALESTNKAQQHQREALKback to top mRNA from alignment at H-canaliculatus_F_contig1309:2438..11426- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1309.2547.1 ID=mRNA_H-canaliculatus_F_contig1309.2547.1|Name=mRNA_H-canaliculatus_F_contig1309.2547.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8989bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1309:2438..11426- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1309:2438..11426- >mRNA_H-canaliculatus_F_contig1309.2547.1 ID=mRNA_H-canaliculatus_F_contig1309.2547.1|Name=mRNA_H-canaliculatus_F_contig1309.2547.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1656bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1309:2438..11426- (Hapterophycus canaliculatus Oshoro5f female)back to top |