mRNA_H-canaliculatus_F_contig13079.2542.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: D7G0S6_ECTSI (Similar to ubiquitin specific peptidase 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S6_ECTSI) HSP 1 Score: 202 bits (515), Expect = 2.980e-58 Identity = 99/111 (89.19%), Postives = 102/111 (91.89%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKVRR---DAAG 324
SMLQCLLATES STYFR+QHWKREVNEDNPLGMGGKMAAAYA L DDAWSGE+SVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK D+AG
Sbjct: 555 SMLQCLLATESLSTYFRSQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAG 665
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: A0A836CC49_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC49_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.970e-32 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKVRRDAA 321
SMLQCL AT + + YF++ W ++NEDN LG GKMA AYA L + W G ++ V P +K+V+ ++AP FAGYQQ D+ ELM FLLDG+HEDLNRV +K +A
Sbjct: 71 SMLQCLSATGALTAYFKSGGWSVDLNEDNALGADGKMARAYAELVRNLWDGRYTQVAPAALKRVIGEHAPAFAGYQQQDSQELMIFLLDGLHEDLNRVRRKPYVEAV 177
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: W7U3R5_9STRA (Ubiquitin carboxyl-terminal hydrolase 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3R5_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.070e-32 Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK---VRRDAAG 324
SMLQCL T + +F + + ++NEDNPLG G +A YA+L D WSG F+ + P K+V+SQYAP FAGYQQHD+ ELM+FLLDG+HEDLNRV +K RD AG
Sbjct: 599 SMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAG 709
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: F6XSL1_CIOIN (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6XSL1_CIOIN) HSP 1 Score: 126 bits (317), Expect = 1.420e-31 Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK 303
S LQCL + YF N+ +K+E+N+ NPLGMGGK+A AYARL WSGE S P K V ++AP F+GYQQHD+ EL+SFL+DG+HEDLNR+ KK
Sbjct: 303 SALQCLSNVPALCNYFLNETYKKELNKTNPLGMGGKLAKAYARLVQSIWSGEQSSFAPREFKMEVGRFAPRFSGYQQHDSQELLSFLVDGLHEDLNRISKK 403
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: A0A7S2Y964_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y964_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.690e-31 Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMG-GKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK 303
S LQCL AT + YF +KRE+N DNPLG G G++A AYA + + WSG+ + P+ KK + ++AP F GYQQHDA EL++F+LDGIHEDLNRV +K
Sbjct: 9 SSLQCLSATIPLTDYFLGYDYKREINHDNPLGTGHGQLATAYANMLSNLWSGKSLSIKPSKFKKQLGEFAPQFQGYQQHDAQELLAFMLDGIHEDLNRVKQK 110
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: A0A7S0MND2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MND2_9CRYP) HSP 1 Score: 119 bits (299), Expect = 3.130e-31 Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAW-SGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK 303
S LQCL TE+ + YF HW++++NE+NPLGM G++A AY + D W +G+ V P +K V++++AP FAG+ QHDA EL+SFLLDG+HEDLNRV +K
Sbjct: 36 SALQCLSNTEALTRYFLQGHWQQDLNEENPLGMKGQLAEAYCSVLQDLWGNGQAFSVNPRELKAVIARFAPHFAGFLQHDAQELLSFLLDGLHEDLNRVREK 137
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: H2ZMR1_CIOSA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZMR1_CIOSA) HSP 1 Score: 125 bits (314), Expect = 3.390e-31 Identity = 56/101 (55.45%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK 303
S LQCL + + YF++ +K+E+N+ NPLGMGGK+A AYA+L WSG+ S P K VSQ+AP F+GYQQHD+ EL SFL+DG+HEDLNR+ KK
Sbjct: 127 SALQCLSNVPAMTNYFKSNTYKKELNKTNPLGMGGKLAQAYAQLIQSIWSGDQSSFAPREFKMKVSQFAPRFSGYQQHDSQELFSFLVDGLHEDLNRISKK 227
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: H2ZMQ7_CIOSA (Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Ciona savignyi TaxID=51511 RepID=H2ZMQ7_CIOSA) HSP 1 Score: 125 bits (314), Expect = 3.600e-31 Identity = 56/101 (55.45%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK 303
S LQCL + + YF++ +K+E+N+ NPLGMGGK+A AYA+L WSG+ S P K VSQ+AP F+GYQQHD+ EL SFL+DG+HEDLNR+ KK
Sbjct: 262 SALQCLSNVPAMTNYFKSNTYKKELNKTNPLGMGGKLAQAYAQLIQSIWSGDQSSFAPREFKMKVSQFAPRFSGYQQHDSQELFSFLVDGLHEDLNRISKK 362
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: A0A812W4G2_9DINO (Usp4 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W4G2_9DINO) HSP 1 Score: 125 bits (313), Expect = 4.970e-31 Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKK 303
SMLQCL A E + +F + W+ EVN DN LG GG++A+AYA L + WSG++SV P+ VK V + +P F G+QQHD+ ELMSFLLDGIHEDLNR+ KK
Sbjct: 303 SMLQCLNACEPLTQHFLDGKWEAEVNPDNVLGQGGRIASAYAALLEAMWSGKYSVCSPSVVKSEVGRASPQFQGFQQHDSQELMSFLLDGIHEDLNRILKK 403
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Match: A0A8C5MUM4_9ANUR (Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MUM4_9ANUR) HSP 1 Score: 124 bits (312), Expect = 6.760e-31 Identity = 60/111 (54.05%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 1 SMLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGEFSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKVR---RDAAG 324
S LQCL T + YFR +K+E+N DNPLGM G++A AYA L WSGE S V P K V ++AP F+GYQQ D+ EL++FLLDG+HEDLNRV KK +DA G
Sbjct: 318 SALQCLSNTPPLTEYFRTDEYKKEINRDNPLGMKGEIAMAYAELIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANG 428 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13079.2542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13079.2542.1 >prot_H-canaliculatus_F_contig13079.2542.1 ID=prot_H-canaliculatus_F_contig13079.2542.1|Name=mRNA_H-canaliculatus_F_contig13079.2542.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=109bp MLQCLLATESFSTYFRNQHWKREVNEDNPLGMGGKMAAAYARLTDDAWSGback to top mRNA from alignment at H-canaliculatus_F_contig13079:1764..2922+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13079.2542.1 ID=mRNA_H-canaliculatus_F_contig13079.2542.1|Name=mRNA_H-canaliculatus_F_contig13079.2542.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1159bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13079:1764..2922+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13079:1764..2922+ >mRNA_H-canaliculatus_F_contig13079.2542.1 ID=mRNA_H-canaliculatus_F_contig13079.2542.1|Name=mRNA_H-canaliculatus_F_contig13079.2542.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=654bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13079:1764..2922+ (Hapterophycus canaliculatus Oshoro5f female)back to top |