mRNA_H-canaliculatus_F_contig1297.2468.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1297.2468.1
Unique NamemRNA_H-canaliculatus_F_contig1297.2468.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: D8LTK3_ECTSI (Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTK3_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.380e-49
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVD-DSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR 297
            P+Y  ALDGR+++VATVLLAHEP+QV+      SVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKK DTFLYVSEGAVGWGPRMRLLSTTEYTLVILR
Sbjct:  373 PQYGPALDGRDDSVATVLLAHEPIQVKEASKYSSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKRDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR 472          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A7Z0WGT1_9PSEU (Metallophosphatase n=2 Tax=Actinophytocola xinjiangensis TaxID=485602 RepID=A0A7Z0WGT1_9PSEU)

HSP 1 Score: 105 bits (262), Expect = 7.600e-25
Identity = 51/99 (51.52%), Postives = 69/99 (69.70%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR 297
            P +  ALDGR+E+   VL+AH+PVQV    +  VGLQLSGHTHGGQ++P+  +  L Q  ++GL K DDT+LYV+ GA  WGP +R+ +  + TLV LR
Sbjct:  300 PDFDKALDGRDESTPVVLMAHQPVQVTEAAERGVGLQLSGHTHGGQIYPFQYVVGLQQPALAGLSKVDDTWLYVTRGAGFWGPPVRVGAPPDITLVELR 398          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A8F4FQT0_9ACTN (Metallophosphoesterase n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FQT0_9ACTN)

HSP 1 Score: 100 bits (249), Expect = 3.060e-23
Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR 297
            P  A ALDGR+ +   VLLAH+P+ V    D  V LQLSGHTHGGQ++P H LA L QG+++GL +  DT LY S G   WGP +R+ +  E T++ LR
Sbjct:  247 PDVAKALDGRDRDRTVVLLAHQPILVDQVRDAGVDLQLSGHTHGGQLWPVHYLARLQQGHLAGLEQVGDTVLYTSRGVGSWGPPVRVGAPPEITIITLR 345          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A1H0BW30_9ACTN (Uncharacterized protein (Fragment) n=2 Tax=Geodermatophilus TaxID=1860 RepID=A0A1H0BW30_9ACTN)

HSP 1 Score: 94.7 bits (234), Expect = 6.620e-23
Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 1
Query:   13 SALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR 297
            +ALDGR++ V  VLLAH+PVQV       VGLQLSGHTHGGQ++P+     L+Q  V GL +  DT LYV+ GA  WGP MR+ +  E  +V LR
Sbjct:   38 AALDGRDDAVPLVLLAHQPVQVEQAAAAGVGLQLSGHTHGGQLWPFDYAVRLDQPAVQGLSRVGDTQLYVTTGAGFWGPPMRIGARPEVAVVELR 132          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A372J1J4_9ACTN (Metallophosphoesterase n=2 Tax=Geodermatophilus sp. LHW52908 TaxID=2303986 RepID=A0A372J1J4_9ACTN)

HSP 1 Score: 99.0 bits (245), Expect = 1.960e-22
Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 1
Query:   13 SALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR 297
            +ALDGR++ V  VLLAH+PVQV+      VGLQLSGHTHGGQ++P+     L+Q  V GLH+  DT LYV+ GA  WGP MR+ +  E T+V LR
Sbjct:  301 AALDGRDDAVPVVLLAHQPVQVQQARAAGVGLQLSGHTHGGQLWPFDYAIRLDQPAVEGLHRFGDTQLYVTSGAGFWGPPMRVGARPEVTVVELR 395          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A6N7HAJ3_9PSEU (Metallophosphoesterase n=1 Tax=Actinophytocola sp. TaxID=1872138 RepID=A0A6N7HAJ3_9PSEU)

HSP 1 Score: 99.0 bits (245), Expect = 2.160e-22
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVIL 294
            P +  ALDGR E+   VL+AH+PVQV    +  V LQLSGHTHGGQ++P+H +  L Q  ++GL K DDT+LYV+ GA  WGP +R+ +  + T++ L
Sbjct:  309 PDFGKALDGRPEDRPVVLMAHQPVQVSDAAERGVDLQLSGHTHGGQLYPFHHVVSLAQPSLAGLSKVDDTWLYVTRGAGFWGPPVRVGAPPDITVIEL 406          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A4R6SLX2_9PSEU (Metallophos domain-containing protein n=1 Tax=Labedaea rhizosphaerae TaxID=598644 RepID=A0A4R6SLX2_9PSEU)

HSP 1 Score: 98.6 bits (244), Expect = 2.300e-22
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR 297
            P +  ALDGR+ +V TVLLAH+PVQV       V LQLSGHTHGGQ +P+H +  L Q  ++GL + D T+LYV+ GA  WGP +R+ +  + T+V L+
Sbjct:  279 PDFDRALDGRDPSVPTVLLAHQPVQVDEAAKRGVDLQLSGHTHGGQAWPFHYVVGLGQPSLAGLSQVDKTWLYVTRGAGFWGPPVRIGAPPDITVVTLK 377          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A7C5JLB3_9BACT (Metallophosphoesterase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C5JLB3_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 2.530e-22
Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVIL 294
            P Y + L   E+N   VLLAH+P+QV+      V L LSGHTHGGQ++P+H   YL Q Y+ G++K ++T LYV++G   WGP +R+ S  E T ++L
Sbjct:  161 PDYQNTLGNIEDNNPLVLLAHQPIQVKQASKYKVDLMLSGHTHGGQIWPFHFFVYLQQPYLKGMYKVNNTNLYVNQGTGCWGPPIRIGSENEITEIVL 258          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: UPI000AB914EE (metallophosphoesterase n=1 Tax=Streptomyces nanshensis TaxID=518642 RepID=UPI000AB914EE)

HSP 1 Score: 97.4 bits (241), Expect = 2.820e-22
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVIL 294
            P Y  AL  R+++ A+VLLAH+PVQ+   V+  V LQLSGHTHGGQ+FP+H +  L    V+GL +  DT LYV+ GA  WGP +R+ +  + T+V L
Sbjct:  214 PDYEKALGDRDDSRASVLLAHQPVQIHESVEYGVDLQLSGHTHGGQIFPFHAVVALANPTVAGLDRYGDTQLYVTRGAGAWGPPVRVGADPDVTVVRL 311          
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Match: A0A1V2QET7_9PSEU (Metallophos domain-containing protein n=2 Tax=Pseudonocardiaceae TaxID=2070 RepID=A0A1V2QET7_9PSEU)

HSP 1 Score: 98.2 bits (243), Expect = 3.300e-22
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 1
Query:    1 PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVIL 294
            P  A ALDGR+     VLLAH+PVQV       V LQLSGHTHGGQ+FP+H+   L Q   +GL K DDT++YV+ GA  WGP +R+ +  E +++ L
Sbjct:  284 PDIARALDGRDTGNPVVLLAHQPVQVEEAARHGVDLQLSGHTHGGQMFPFHLAVPLQQPVTAGLEKIDDTWVYVTRGAGFWGPPVRVGAPPEISMIRL 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1297.2468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTK3_ECTSI3.380e-4985.00Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A7Z0WGT1_9PSEU7.600e-2551.52Metallophosphatase n=2 Tax=Actinophytocola xinjian... [more]
A0A8F4FQT0_9ACTN3.060e-2350.51Metallophosphoesterase n=1 Tax=Aquihabitans sp. G1... [more]
A0A1H0BW30_9ACTN6.620e-2352.63Uncharacterized protein (Fragment) n=2 Tax=Geoderm... [more]
A0A372J1J4_9ACTN1.960e-2254.74Metallophosphoesterase n=2 Tax=Geodermatophilus sp... [more]
A0A6N7HAJ3_9PSEU2.160e-2248.98Metallophosphoesterase n=1 Tax=Actinophytocola sp.... [more]
A0A4R6SLX2_9PSEU2.300e-2249.49Metallophos domain-containing protein n=1 Tax=Labe... [more]
A0A7C5JLB3_9BACT2.530e-2245.92Metallophosphoesterase n=1 Tax=Bacteroidetes bacte... [more]
UPI000AB914EE2.820e-2248.98metallophosphoesterase n=1 Tax=Streptomyces nanshe... [more]
A0A1V2QET7_9PSEU3.300e-2250.00Metallophos domain-containing protein n=2 Tax=Pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1297contigH-canaliculatus_F_contig1297:26891..28168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score173.7
Seed ortholog evalue4.3e-41
Seed eggNOG ortholog2880.D8LTK3
Preferred nameTMPPE
EggNOG free text desc.Calcineurin-like phosphoesterase
EggNOG OGs2QRHG@2759,COG1408@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size297
Cds size297
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1297.2468.1prot_H-canaliculatus_F_contig1297.2468.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1297 26891..28168 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929027.7199507-CDS-H-canaliculatus_F_contig1297:26890..270131622929027.7199507-CDS-H-canaliculatus_F_contig1297:26890..27013Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1297 26891..27013 -
1696845652.9430585-CDS-H-canaliculatus_F_contig1297:26890..270131696845652.9430585-CDS-H-canaliculatus_F_contig1297:26890..27013Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1297 26891..27013 -
1622929027.7315218-CDS-H-canaliculatus_F_contig1297:27464..275431622929027.7315218-CDS-H-canaliculatus_F_contig1297:27464..27543Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1297 27465..27543 -
1696845652.9537013-CDS-H-canaliculatus_F_contig1297:27464..275431696845652.9537013-CDS-H-canaliculatus_F_contig1297:27464..27543Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1297 27465..27543 -
1622929027.7437737-CDS-H-canaliculatus_F_contig1297:28073..281681622929027.7437737-CDS-H-canaliculatus_F_contig1297:28073..28168Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1297 28074..28168 -
1696845652.9619546-CDS-H-canaliculatus_F_contig1297:28073..281681696845652.9619546-CDS-H-canaliculatus_F_contig1297:28073..28168Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1297 28074..28168 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1297.2468.1

>prot_H-canaliculatus_F_contig1297.2468.1 ID=prot_H-canaliculatus_F_contig1297.2468.1|Name=mRNA_H-canaliculatus_F_contig1297.2468.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=99bp
PRYASALDGREENVATVLLAHEPVQVRPGVDDSVGLQLSGHTHGGQVFPY
HVLAYLNQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLVILR
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mRNA from alignment at H-canaliculatus_F_contig1297:26891..28168-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1297.2468.1 ID=mRNA_H-canaliculatus_F_contig1297.2468.1|Name=mRNA_H-canaliculatus_F_contig1297.2468.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1278bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1297:26891..28168- (Hapterophycus canaliculatus Oshoro5f female)
CCTCGCTACGCTTCCGCCCTGGATGGCAGGGAAGAGAACGTGGCCACGGT CCTCTTGGCGCACGAACCCGTTCAGGTGCGCCCGGGTGTGGACGAGTAGA CTGCCTTGATGGGTGTGTGGTCTGGCGGTTTCTTCTCGATCGTCCGCCGC GCTCATGCGTGGCGATTGCCTTGAGTCCGCTGTTCGTGGTTTACAAGGGC GCTCGTTCTGCCGCATGCCACTGGTCACGTGTCAACGTTCGGGCGCGGAT ACTTCAGGACGCCTAAACCTTGAGTCAGACCTACCGAAAGAACGATCGTG TCCTTTCCCTCCGAAGACTGTTGGGACCACTAGAGAGAGAAGGGGTTTGT GGTTGGTACGTAGTCATCTGATTGGTCGTCATCCAAGGAAACTCGGCCGT TCCCGTTTCGAAATTCCAAAATTGTTCGACCAATCAGATAATTGCGTGCA ATAAAATCCCGTGGCGTACCTTGGGCTATTTGCTGTTTGCCGGCGCCCAC CCTGCTCTCGGCGTTGGAGGCACGTACTGTGCGTGCTTGAGCCTTGTGTT CCTTGCTGGCGCTTGATCCATGGAAAACGCAAAACTTGACCTGCACGAAT AGGTGCGAGAGGCCGCCAAGTACAGCTCCGTGGGCTTGCAGCTCTCTGGG CACACGCACGGAGGGCAGGTGTTTCCTTATCACGTCTTGGCATACCTCAA CCAGGTAAAGCTAATTACCAGCGCCGGTCCGAGTTGGAGAGGCTCGCGCT CTTGTCCGACGCGTTCGCCTTCCGGGCTAGGAAGGAGGGGGTATTGTTGT CTGTGGGGTTGCCGTCAGCGGTAAGGTCGCGGTTTTTGCCGAGGGCACGC GTGAGAGGGTACGCGTGAGGGGACACAGCAAGGGTCGGCGTTGAGGTTGA GTTCAGAGTCAGGCTCCAGGACGAAGATCATGGGCATTTGTGTTGCTACG ATCGTGGAGTTCACGTCACCCAGGAATTCAATGCCACACATCCTTGTTAC AAAGACCAAGACCTCGATGCGGGTCGCCCGTGGCCGCGCGTCTTCTATCA TCTCATCCCGTTGGCTAGAATAAAGCTCAAGGCTGCTGTGCCTGCCGGTA TCCTCTGTATCGGCTGGGGCTGATTCACCCTATTTTTTTGTTGTTGTTGC TGCAGGGATACGTCTCGGGTCTGCACAAAAAGGACGACACCTTCCTCTAC GTCTCCGAGGGCGCGGTAGGCTGGGGGCCGAGGATGCGCCTCCTTTCGAC CACAGAGTACACCCTTGTGATCCTGAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1297:26891..28168-

>mRNA_H-canaliculatus_F_contig1297.2468.1 ID=mRNA_H-canaliculatus_F_contig1297.2468.1|Name=mRNA_H-canaliculatus_F_contig1297.2468.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=594bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1297:26891..28168- (Hapterophycus canaliculatus Oshoro5f female)
CCTCGCTACGCTTCCGCCCTGGATGGCAGGGAAGAGAACGTGGCCACGGT
CCTCTTGGCGCACGAACCCGTTCAGGTGCGCCCGGGTGTGGACGACCTCG
CTACGCTTCCGCCCTGGATGGCAGGGAAGAGAACGTGGCCACGGTCCTCT
TGGCGCACGAACCCGTTCAGGTGCGCCCGGGTGTGGACGACTCCGTGGGC
TTGCAGCTCTCTGGGCACACGCACGGAGGGCAGGTGTTTCCTTATCACGT
CTTGGCATACCTCAACCAGCTCCGTGGGCTTGCAGCTCTCTGGGCACACG
CACGGAGGGCAGGTGTTTCCTTATCACGTCTTGGCATACCTCAACCAGGG
ATACGTCTCGGGTCTGCACAAAAAGGACGACACCTTCCTCTACGTCTCCG
AGGGCGCGGTAGGCTGGGGGCCGAGGATGCGCCTCCTTTCGACCACAGAG
TACACCCTTGTGATCCTGAGGGGATACGTCTCGGGTCTGCACAAAAAGGA
CGACACCTTCCTCTACGTCTCCGAGGGCGCGGTAGGCTGGGGGCCGAGGA
TGCGCCTCCTTTCGACCACAGAGTACACCCTTGTGATCCTGAGG
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