mRNA_H-canaliculatus_F_contig1279.2317.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: D7FR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR81_ECTSI) HSP 1 Score: 489 bits (1260), Expect = 2.210e-155 Identity = 272/382 (71.20%), Postives = 296/382 (77.49%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAPTKKKGPAQTIERETPGDGVG----TPPTLGAGGT-----GSGA-------AGAEKETHVVVERSSDPEDGQNGKPGDKLQRLAEFSDDALERELAGRRS-FVGMVXXXXXXXXXXXXXXXACGQDGGGVCVPCFEIM 1100
W+MIE+GDRLCLGLSGGKDSMTLLHVLLHL+KRAPI FEVACATVDPQT SFDPSPLIPYLERLGVKLHY+SSPIIEQAK SMQGDSLCAFCARMKRGLLY+CCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDV VIRPLCYAREAL KDFARTNRLP+VNENCPACFEEPKERHRVKKMLAKEESLFPSMYANL++ALVPLMD E Y S++KTS+EVAARQ+ER SR PT++K Q R PGD T PT T G GA A A E V+ ++ +D G+ G LAEFSD++LE+ELA RRS F G AC Q GGVC+PCFEI+
Sbjct: 885 WRMIEDGDRLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCARMKRGLLYACCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVRVIRPLCYAREALTKDFARTNRLPLVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLRKALVPLMDDEVYASMDKTSSEVAARQLERRSRPPTRRKKGDQAGGRN-PGDAAESSPLTAPTTAVASTETRKAGDGATASPDRTAAAALEDDSGVQGTAGTDDIGEGRRGTAA-CLAEFSDESLEQELARRRSVFDG-------GAVVGADARGACEQKNGGVCMPCFEIV 1257
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: A0A7S3XUF4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUF4_HETAK) HSP 1 Score: 347 bits (891), Expect = 5.410e-112 Identity = 165/219 (75.34%), Postives = 190/219 (86.76%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMD 662
W MI+EGDRLCLGLSGGKDS+ LLHVLL L+++API FE+ACATVDP TASFDP PLIPYL LGV HYL PIIE+AK ++QGDS+C+FC+RMKRGLLY C R+ GY KLVLAQHLDDLAESF+MSA HNGQ+RTMKA+Y+++ GD+SVIRPLCY REA K FAR RLPV+NENCPACFE+PKER RVK+MLAKEESLFP +Y L+RALVPLMD
Sbjct: 78 WGMIKEGDRLCLGLSGGKDSLALLHVLLALQRKAPIRFELACATVDPMTASFDPRPLIPYLASLGVTYHYLEEPIIERAKTALQGDSICSFCSRMKRGLLYKCLRDHGYTKLVLAQHLDDLAESFVMSAFHNGQLRTMKAHYRVDKGDLSVIRPLCYTREAATKAFARQARLPVINENCPACFEQPKERARVKQMLAKEESLFPDLYTTLRRALVPLMD 296
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: I2CPH6_NANGC (Pp-loop domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH6_NANGC) HSP 1 Score: 340 bits (873), Expect = 7.190e-109 Identity = 172/258 (66.67%), Postives = 200/258 (77.52%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAPTKKKGPAQTIERE 779
W MI+EGDRLCLGLSGGKDS+TLLHVLLHL+K+API F VACATVDPQT+SFDPSPLIPY++ LGV HYLS PII QAK +QGDSLC+FC+RMKRGLLY+CC E GYNKL+LAQHLDDL ES MS +HNGQ RTMKANY+ E G + VIRPL Y REA+ FA NRLP++NENCPACFE+PKER R+KKML KEESL P MYAN++R ++PL+D + Y A + R RH +A KG T RE
Sbjct: 27 WDMIKEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSVACATVDPQTSSFDPSPLIPYMKALGVPYHYLSHPIIAQAKAQLQGDSLCSFCSRMKRGLLYTCCVESGYNKLLLAQHLDDLVESLFMSLMHNGQTRTMKANYQGERG-IRVIRPLIYTREAVTHAFATGNRLPIINENCPACFEQPKERARIKKMLRKEESLLPRMYANIRRGILPLLDEDTYGVFQSKYAAIEERI--RHRKA---NKGKVATKGRE 278
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: A0A7S2CJN7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJN7_9STRA) HSP 1 Score: 334 bits (856), Expect = 3.230e-103 Identity = 170/263 (64.64%), Postives = 204/263 (77.57%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAPTKKKGPAQTI-ERETPGD 791
W MIE+GDRLCLGLSGGKDS+ LL LL LK RAPI+F +A ATVDPQT SFDPSPL Y++ LGV+ HYLS PI+E+A +QGDSLCAFC+R KRGLLY+CCR+ + KLVLAQHLDDLAESFIMS LHNGQVRTMKA+YKIEAGDVSVIRPL Y RE K FA T +LPV+NENCPACFE+PKERHRVKKMLA+EESL +++ N++RAL PLM + Y +++ A + + Q R +K+ P ++E PGD
Sbjct: 232 WSMIEDGDRLCLGLSGGKDSLALLMALLDLKSRAPISFHLAAATVDPQTPSFDPSPLKAYMKELGVEYHYLSEPIVERAATRLQGDSLCAFCSRFKRGLLYNCCRKNKFTKLVLAQHLDDLAESFIMSTLHNGQVRTMKAHYKIEAGDVSVIRPLAYVREHETKAFALTAKLPVINENCPACFEDPKERHRVKKMLAREESLCQAIFPNMRRALQPLMSDDIYKTMDDIRATIDSNQ-----RGAKRKRTPITAHPQKEDPGD 489
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: A0A7S3MGR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGR1_9STRA) HSP 1 Score: 346 bits (887), Expect = 4.630e-102 Identity = 162/245 (66.12%), Postives = 202/245 (82.45%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAP 740
W MIE+GDRL LGLSGGKDS+ LLH+LL ++KRAP+ FE+ACATVDPQT SFDPSPLIPY++ LG+ HYLS PI+E AK +QGDSLCAFC+R KRGLLYSCCR YNKLVLAQHLDDL ESF+MSALHNGQVRTMKANYKIEAGDV VIRPL Y RE + +DF++ ++LP++NENCPACFE+PKER R+KK++A+EE++ P+++ NLKRAL+PL+ + YV++ ++ + RAP
Sbjct: 851 WGMIEDGDRLLLGLSGGKDSLALLHILLAVQKRAPVKFEIACATVDPQTDSFDPSPLIPYVQSLGITYHYLSEPIVELAKSKLQGDSLCAFCSRFKRGLLYSCCRTNKYNKLVLAQHLDDLVESFLMSALHNGQVRTMKANYKIEAGDVRVIRPLIYVREHMTRDFSQASKLPIINENCPACFEQPKERDRMKKLMAQEETMVPNLFYNLKRALMPLLHDDTYVAMAAVTSAIEENANSAKIRAP 1095
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: H3H5W5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5W5_PHYRM) HSP 1 Score: 338 bits (866), Expect = 6.860e-100 Identity = 167/256 (65.23%), Postives = 200/256 (78.12%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAPTKKKGPAQTIE 773
W MI+EGDRL LG+SGGKDS++LLHVLL +KRAP+ FE+ACATVDPQT SFDPSPL Y+ LGV+ HYLS IIE+A + GDSLC++C+RMKRG+LYSCCR+ G+NKLVLAQHLDDLAESF MSA+HNGQ+RTMKA Y + DV V+RPL Y RE +K FA +RLPV+NENCPACFEEPKERHRVKKMLA+EESL+P MY +L+RAL+PLMD +Y L A V + ER +K KG A T +
Sbjct: 765 WDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCELNGDSLCSYCSRMKRGVLYSCCRKYGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREIELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDNASYAPLEAVRARVEQAKQERKRAPSSKGKGQANTAK 1020
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: A0A0P1AED3_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AED3_PLAHL) HSP 1 Score: 336 bits (861), Expect = 2.480e-99 Identity = 169/249 (67.87%), Postives = 201/249 (80.72%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVA-ARQVERHSRAPTKK 749
W MI+EGDRL LG+SGGKDS++LLHVLL +KRAPI F++ACATVDPQT SFDPSPL Y+ LG++ HYLS IIE+AK M GDSLC+FCARMKRGLLY+CCR G+NKLVLAQHLDDLAESF MSA+HNGQ+RTMKA Y + DV ++RPL Y RE +K FA +RLPV+NENCPACFEEPKERHRVKKMLA+EESL+P MY +L+RAL+PLMD +Y +L A V A+QV + RAP+ K
Sbjct: 754 WDMIQEGDRLLLGVSGGKDSLSLLHVLLSFQKRAPIRFKLACATVDPQTPSFDPSPLKDYMHTLGLEYHYLSENIIERAKCEMNGDSLCSFCARMKRGLLYTCCRNFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEILRPLAYVREIELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDTSYTALKAVRARVEHAKQVRK--RAPSSK 1000
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: W2R0X1_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2R0X1_PHYPN) HSP 1 Score: 336 bits (862), Expect = 2.570e-99 Identity = 166/256 (64.84%), Postives = 199/256 (77.73%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAPTKKKGPAQTIE 773
W MI+EGDRL LG+SGGKDS++LLHVLL +KRAP+ FE+ACATVDPQT SFDPSPL Y+ LGV+ HYLS IIE+A M GDSLC++C+RMKRG+LYSCCR+ G+NKLVLAQHLDDLAESF MSA+HNGQ+RTMKA Y + DV V+RPL Y RE +K FA +RLPV+NENCPACFEEPKERHRVKKMLA+EESL+P MY +L+RAL+PLMD +Y L A V + ER +K KG ++
Sbjct: 756 WDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERKRAPSSKSKGQNNAVK 1011
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: UPI001DB1BACB (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001DB1BACB) HSP 1 Score: 333 bits (855), Expect = 2.460e-98 Identity = 163/250 (65.20%), Postives = 195/250 (78.00%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAPTKKKG 755
W MI++GDRL LG+SGGKDS++LLHVLLH +KRAP+ FE+ACATVDPQTASFDPSPL Y+ LGV YLS IIE+A M GDSLC++C+RMKRGLLY+CCR++GYNKLVLAQHLDDLAESF MSA+HNGQ+RTMKA Y DV V+RPL Y RE +K FA +RLPV+NENCPACFEEPKERHRVKKMLA+EESL+P MY +++RAL+PLMD +Y L + + +R K KG
Sbjct: 756 WDMIQDGDRLLLGVSGGKDSLSLLHVLLHFQKRAPVRFELACATVDPQTASFDPSPLKEYMRALGVPYFYLSENIIERATCEMSGDSLCSYCSRMKRGLLYTCCRKEGYNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNNQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSIRRALLPLMDDASYAPLEAVRTRIEQAKQQRRCAPSNKGKG 1005
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Match: A0A662Y5N6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5N6_9STRA) HSP 1 Score: 334 bits (857), Expect = 2.630e-98 Identity = 165/246 (67.07%), Postives = 200/246 (81.30%), Query Frame = 3
Query: 6 WKMIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFDPSPLIPYLERLGVKLHYLSSPIIEQAKKSMQGDSLCAFCARMKRGLLYSCCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVSVIRPLCYAREALMKDFARTNRLPVVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLKRALVPLMDGEAYVSLNKTSAEVAARQVERHSRAPT 743
W MI++GDRL LG+SGGKDS++LLHVLL +KRAP+ FE+ACATVDPQTASFDPSPL Y+ LGV +YLS IIE+A + GDSLC++C+RMKRGLLY+CCR +G+NKLVLAQHLDDLAESF MSA+HNGQ+RTMKA Y + DV V+RPL Y RE +K FA +RLPV+NENCPACFEEPKERHRVKKMLA+EESL+P MY +L+RAL+PLMD +YV L A V ++ ER+ RAP+
Sbjct: 793 WDMIQDGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTASFDPSPLKEYMRALGVPYYYLSENIIERATCELSGDSLCSYCSRMKRGLLYTCCRTRGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYTREIELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYVPLEAVRARVEQKKQERN-RAPS 1037 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1279.2317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1279.2317.1 >prot_H-canaliculatus_F_contig1279.2317.1 ID=prot_H-canaliculatus_F_contig1279.2317.1|Name=mRNA_H-canaliculatus_F_contig1279.2317.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=364bp MIEEGDRLCLGLSGGKDSMTLLHVLLHLKKRAPINFEVACATVDPQTASFback to top mRNA from alignment at H-canaliculatus_F_contig1279:170..6690+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1279.2317.1 ID=mRNA_H-canaliculatus_F_contig1279.2317.1|Name=mRNA_H-canaliculatus_F_contig1279.2317.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6521bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1279:170..6690+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1279:170..6690+ >mRNA_H-canaliculatus_F_contig1279.2317.1 ID=mRNA_H-canaliculatus_F_contig1279.2317.1|Name=mRNA_H-canaliculatus_F_contig1279.2317.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2184bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1279:170..6690+ (Hapterophycus canaliculatus Oshoro5f female)back to top |