mRNA_H-canaliculatus_F_contig1278.2312.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: D8LN48_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN48_ECTSI) HSP 1 Score: 910 bits (2352), Expect = 4.990e-298 Identity = 679/1306 (51.99%), Postives = 784/1306 (60.03%), Query Frame = 2
Query: 1760 QMSLGSALGTVSGIFTDATPGVPTPKAPRFSSSTSSSITVFVDTVGGDSAASANAYEFEIQTYEEDGNRGDSTLWTPVLQNSHDFDEDVGAMDPSPIMTATNLSPSSSYRFRVRVRHAGGVSPVSDISEMFRTGPGVPKSSPSPPNVDVQLVTFSTIGITWPSWAEPSEEDPKYGGRYGFEAQYERLGSGYWQQATEATLDSESQEWKATAEGLEPYTQHRFRVRAVNSVGAGEWSTTSGWIRTEAEVSFSTA-ENSESRPTTSKLPESVLLSASGDGNMPGHLKDFDYYHGAGVGGKVGLNGEGGSXXXXAAVIVARVPGVPLPSRTPFFFTGLPELYAVPSHSGVTSVTLKLWGAGGGGVLTPVAAGGVYGGENGTSNATRVLGGGGGFLQVEVTVSPGEMLEVLVGGXXXASRGEXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRGVSGGSPAFEEAVIGTGGAGECKGGWCSASEAMTTSYEGIENWVTTGXXXXXXXQGGLRGNSDVFDWVDGGGGRQGRASS-HGGDTSMPLVYKGTSSRTATPGQPLAGGIGADGPRGXXXXXXXXXXXXXXXXXXXXXXXXXXSSYADVSALAAEDAASGWGSG-ENAVRVVEVGDTWAEVEWDRILDGVPGEEPVFFELEVSKGKGSEDFYPSATVDALGGNGLSAVPSDSRAPGGAATAVLRAFLLGLISSSDYNVRVTAVSRVGRGRPSALLSFSTEALPTNEWKQARGACYGITRVIPRPSRVEGRGRGLTGPALGEN-ESWDTDSAAIE-TEIGGFSNPPTELRQEFPSPRSGHTLAVVAGKVYMFGGLSSNIQCSSAMVGSTALGDTPGGVITENCIGADSFSAELWEFDPPLKQWTEVLVSGSGDGAPAARSGHTASVSGSKMIVFGGRGNVSDSGFLQDGQGSRTALLGDQWEIDLDPKQHVTVATNSSTAIREGGPTFIPLVVAVGQTDAQQAEVAMDTGMCVSDLTVAVHIDHGCTGQLRLTLYGPGPPPGDTSQLESTPRAEPAVLFVGRG----GTDNVVFAFENDATSSASTSGGGCADGMNVSFADSAESGVWECCGEGSTLAGNFKSIDRLLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPCDWRSSLRWSNSSSSMERFSPAPRAHHLAVVVDRGLYVSGGVGIRGTLSDLWRRGDTSSEWTLLAEGPGAPLGSTGPFNPHGANVLVSPWGVLSIGGMPQRTGVGATSELWVLNPASNYWRSVSGDGGT-MLRPVGR 5647
MS+G+ G +GI T+ P P PKAP+ SSST +S+TVFVDT AA AYEFE+Q +E+DG GD+T W PV ++H D A+ P+ TAT LSPSSSYRFR + GG Q+V T GR +EW+ATAEGLE Y+QHRFRVRAVN+VGAGEWS S W RT+ + S + + E+ S +P SVLLS SG+G PGH KDFDYYHG GVGGKV L+G+GG AAVIV+R+PGVPLPSR+ FFFT VLGGGGGFLQ EV VSPGEMLEVLVG XXX XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VRG GGSPA ++ V+ TGG GEC+ GWCSASEA SYEGIENWVTTG QGGL G SDVFDWVDGGGGRQG SS G++SMP+V++GT SR ATPG+ L GGIGA+G RGXXXXXXXXXXXXXXXXXXXXXXXXXXSS+AD ALA + + WGSG E+ VRVVEVG++W EVEW ++ V GE+P+F+E+ G ++ R LL T R+G P+ LL+ +T W + G+ R G G G+ G G ES D D A +IG S GH VGSTALGDT GG T++C+G DSFSAELWEF+P WTEVLV+ G+ AP AR GHTASV GSKM+VFGGRGN SDS Q G+GS TALL D+W IDLD Q +T++TN ST IREGG FIPLVV QT+AQ+AE +D MCV+DL+VAV IDH C QL+LTLYGPGPPPGDTS L RAEPAVL +G G +D +F ND + S GGC DGM+VSF DSAESGVWE C S L G FK+ DRLLVG+FL MPAEGEWTLGVLD VDGSNGTV WSLDVE+RPCDWRS+LRW N S P RA H A VVD G +VSGG G G LSDLWRRG+ SSEW +LAEGPG PL STGP+NPHGA+++VSPWG+LSIGGM GV + + +WVL+P S W SV GDGG PVGR
Sbjct: 303 DMSVGTTGGGAAGISTNTVPVTPAPKAPKLSSSTPTSLTVFVDTASTTGAAEIEAYEFEVQRHEDDGYSGDTTRWIPV--STHADDNSDAAV---PLTTATELSPSSSYRFR----YDGG-----------------------------QVVVMGT-------------------GR------------------------GSQEEWRATAEGLEAYSQHRFRVRAVNAVGAGEWSAASDWARTKGDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHGIGVGGKVSLDGQGGDGGPGAAVIVSRIPGVPLPSRSSFFFT--------------------------------------------------VLGGGGGFLQAEVKVSPGEMLEVLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGTDGGSPALDQMVVNTGGGGECQNGWCSASEADAVSYEGIENWVTTGGSGGSTVQGGLGGKSDVFDWVDGGGGRQGAVSSPRSGESSMPIVFRGTGSRPATPGRSLTGGIGANGARGXXXXXXXXXXXXXXXXXXXXXXXXXXSSHADTGALALDHRTNEWGSGGEDGVRVVEVGESWVEVEWRAVVGAVAGEQPMFYEI------------------------------------GDRNSISRGPLLN---------ECTPRQRMGMDHPTPLLAGAT-------WARTHGS-------RTREDWFMGHGSGVYGGRGGRIIESPDRDEAGASLAKIG--------------SHDGGHR----------------------RKVGSTALGDTAGGANTDDCMGGDSFSAELWEFNPSTSVWTEVLVNVDGN-APPARDGHTASVVGSKMVVFGGRGNGSDSD-AQAGRGSNTALLEDEWAIDLDLSQLITISTNFSTNIREGGQIFIPLVVE--QTEAQRAEADVD--MCVTDLSVAVEIDHDCIQQLQLTLYGPGPPPGDTSPLGDVSRAEPAVLVLGGGISDCASDVDLFGDGNDGAAG-DASYGGCVDGMDVSFEDSAESGVWEGCNNRSPLRGTFKAADRLLVGRFLRMPAEGEWTLGVLDNAVDGSNGTVTRWSLDVEIRPCDWRSALRWINVSGDAR---PPARARHTAAVVDGGRFVSGGTGSFGALSDLWRRGEASSEWMILAEGPGVPLASTGPYNPHGASIMVSPWGMLSIGGMLPGRGVESATGVWVLDPVSKRWHSVDGDGGVDASSPVGR 1372
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A6H5JMT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT4_9PHAE) HSP 1 Score: 497 bits (1280), Expect = 1.930e-155 Identity = 287/496 (57.86%), Postives = 328/496 (66.13%), Query Frame = 2
Query: 4232 LRQEFPSPRSGHTLAVVAGKVYMFGGLSSNIQCSSAMVGSTALGDTPGGVITENCIGADSFSAELWEFDPPLKQWTEVLVSGSGDGAPAARSGHTASVSGSKMIVFGGRGNVSDSGFLQDGQGSRTALLGDQWEIDLDPKQHVTVATNSSTAIREGGPTFIPLVVAVGQTDAQQAEVAMDTGMCVSDLTVAVHIDHGCTGQLRLTLYGPGPPPGDTSQLESTPRAEPAVLFVGRGGTD--NVVFAFENDATSSAS-TSGGGCADGMNVSFADSAESGVWECCGEGSTLAGNFKSIDRLLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPCDWRSSLR--------------------WSNSSSSMERFSPAPRAHHLAVVVDRGLYVSGGVGIRGTLSDLWRRGDTSSEWTLLAEGPGAPLGSTGPFNPHGANVLVSPWGVLSIGGMPQRTGVGATSELWVLNPASNYWRSVSGDGGT-MLRPVGR 5647
+RQE PSPRSGHT+ V+AGKV G S+ +C AELWEF+P WTEVLV+ GD AP AR GHTASV+GSKMIVFGGRGN SDS Q G+GS TALL D+WEIDLD Q +T++TNSST IREGG TFIPLVV QT+AQ+AE +D MCV+DL+VAV IDH C QL+LTLYGPGPPPGDTS+L RAEPAVL +G G D + V F + +A S GGC D M+VSF DSAESGVWE C + G FK+ DRLLVG+FL MPAEGEWTLGVLD VDGSNGTV WSLDVE+RPCDWRS+LR W N + P RA H A VVD GL+VSGG G G LSDLWRRG+ SSEW +LAEGPG PL STGPFNPHGA+++VSPWGVLSIGGM GV + S +WVL+P S WRSV+ DGG PVGR
Sbjct: 1 MRQELPSPRSGHTMVVIAGKV----GPGSSTEC-----------------------------AELWEFNPSTSVWTEVLVNIDGD-APPARDGHTASVAGSKMIVFGGRGNKSDSD-TQAGRGSNTALLQDEWEIDLDLSQLITMSTNSSTNIREGGQTFIPLVVE--QTEAQRAEADVD--MCVTDLSVAVEIDHDCIRQLQLTLYGPGPPPGDTSRLGDVSRAEPAVLVLGGGIADCASDVDLFGDGIDGAAGDVSYGGCVDRMDVSFEDSAESGVWEGC---NNRRGTFKAADRLLVGRFLRMPAEGEWTLGVLDNAVDGSNGTVSRWSLDVEIRPCDWRSALRSLGTRRPPCATVRAFARLRRWINVTGDAR---PPARARHTAAVVDGGLFVSGGTGSFGALSDLWRRGEASSEWMILAEGPGVPLASTGPFNPHGASIMVSPWGVLSIGGMLPGRGVESASGVWVLDPVSKRWRSVNRDGGVDASSPVGR 451
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A6H5JSC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC5_9PHAE) HSP 1 Score: 273 bits (698), Expect = 2.080e-75 Identity = 126/187 (67.38%), Postives = 145/187 (77.54%), Query Frame = 1
Query: 145 RAAPRILGQVLQYASAGHGGGSDDATVVWQTVDGNSINTWEISVNVDGFDRSTGKTHTVQDGWFTLEISRSYPKPSPLPDLRLETEPIAWDDTSAAMEAKVHEALRESKHPQYASWTAAVVRCDETEERDGNHWAGGCHFLNYSGFMWHLRLSPPANGALAIRQDFPVVTVAKETITAKWSGQGHQV 705
RA + LQYA AG GGSDD W++ +GN+ +TW+I++ VDGFDRS G+ H V+DGWFTL +SR+YPKPS LPDL L+TEPI WDDT A MEAKV + LRES+HPQY+SWT AVVRCDETEER GNHWAGGC FL Y GF WHLRLSPP A A R+DFPVVTV KETITAKWSG G Q+
Sbjct: 39 RALVLVCRYELQYAVAGRSGGSDDTFANWKSAEGNTHDTWDITIQVDGFDRSIGRRHMVEDGWFTLALSRAYPKPSSLPDLWLDTEPIGWDDTWADMEAKVQKTLRESRHPQYSSWTVAVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPGDASATREDFPVVTVTKETITAKWSGDGDQM 225
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A7S2S9P4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9P4_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.450e-55 Identity = 211/734 (28.75%), Postives = 299/734 (40.74%), Query Frame = 2
Query: 4118 EGRGRGLTGPALGENESWDTDSAAIETEIGGFSN------PPTELRQEFPSPRSGHTLAVVAGKVYMFGGLSSNIQCSSAMVGSTALGDTPGGVITENCIGADSFSAELWEFDPPLKQWTEVLVS----------GSGDGA-PAARSGHTASVSGSKMIVFGGRGNVSDSGFLQDGQGSRTALLGDQWEIDLDPKQH-VTVAT-----------NSSTAIREGGPTFIPLVVAVGQTDAQQAEVAMDTG--MCVSDLTVAVHIDHGCTGQLRLTLYGPGPPPGDTSQLESTPRAEPAVLFVGRGGTDNVVFAFENDATSSASTSGGGCA-DGMNVSFADSAESGVWECCGEGSTLAGNFKSIDRLLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPCDWRSSLRWSNSSSSMERFSPAP--RAHHLAVVVDRGLYVSGGVGIRGTLSDLWRRGDTSSEWTLLAEGPGAPLGSTGPFNPHGANVLVSPWGVLSIGGMPQRTGVGATSEL----WVLNPASNYWRSVSGDGGTMLR--------------------------PV-GRYHGAAAIVHGSP----DYSTTNDTSHDKDVPGLLLFGGKDDWRRLDDLWRLKLSSISVPTSISTANSDIEWSARARAPRVRVQTVGPVIAPRPQSAGSWSLAELGRDERCAHVLISGTANDTWHASCGDGTDGEGGDGSCTMQAVLKMAWCLGEYQSVG 6112
+G G GL P LG + E+GG ++ P ++ + PSPR GHTLAVV G +Y+FGGLS CS + S G G+ C S ELW ++P + QW E+ V G G P +R H+AS KMIV+GG D LGD WE+D+ + + +VA+ N S +I +GG FI V ++ +C+ DL V V + H CT Q+ L LYGPGP + A+ LF GT + GC D + ++F D AE V ECC S G+F+ ++ L F +PA GEWTL D D +G++ + L+ + CD + W +E PAP RA H A+ V +++ GG G L DLWR S W LA L +T G ++++SPWG+L++GG+ R+ S L +L+ ++ WR+V T L PV GRY AA ++ P D + D P L FGG D R DD+ RL L ++ T + + A+ RA R +S G W ++ CA + T +G CT++ VL+ AWCL EYQ G
Sbjct: 4 QGEGYGLAAPVLGRPHASPGTEDPWTLEVGGTNDSSRVFDPNSQSTEVSPSPRRGHTLAVVLGNIYLFGGLSEGYDCSLGLTDSRRFGSPNAGLDVSVCRLRKGESNELWAYNPVMDQWRELQVGRGRFYHATPEGPGQSVRPPSREMHSASTVDDKMIVYGGVRYGDDH--------VAPEYLGDVWELDVGRRNYGFSVASTEVGGGVGGGRNRSVSIPQGGHVFIEAEVNSSTISFEEPAPTYRRAEELCIVDLEVEVELQHPCTRQVELVLYGPGPSAHSANYFPQF-HAQAVKLFQHHDGTKDA-----------------GCGVDLVGLTFDDDAEPSVRECCH--SPFTGSFRPVEPLHA--FHGVPALGEWTLSAYDRDPDDLSGSISHFKLNFRVTECD--QTFHWRE----LEVAGPAPPLRAQHAAITVGESVFIFGGHN-DGILDDLWRLDLGSRTWHALASNHRDNLAATA----VGRSLVLSPWGLLALGGLSGRSIDDGQSALDTSVRLLDLWTHRWRTVETGTDTSLDAEPHRHRGSGSLSGKGHAFPALEERVPVQGRYLSAAVLLGERPGKYLDAKGLYEVGTDA-WPALYTFGGYDGSRTFDDIRRLSLHALD------TEEEEKDPVAQLRAARCEWVLGANTTT---ESRGDW-------EDTCAAENTAAT------------------NGQCTLRQVLQRAWCLEEYQGFG 661
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A7S2G1M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1M0_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.890e-52 Identity = 143/428 (33.41%), Postives = 204/428 (47.66%), Query Frame = 2
Query: 4211 FSNPPTELRQEFPSPRSGHTLAVVAGKVYMFGGLSSNIQCSSAMVGSTALGDTPGGVITENCIGADSFSAELWEFDPPLKQWTEVLVSGSGDGAPAARSGHTASVSGSKMIVFGGRGNVSDSG-----FLQDGQGSRTALLGDQWEIDLDPKQHVTVATNSS--TAIREGGPTFIPLVV---------AVGQTDAQQAEVAMDTGMCVSDLTVAVHIDHGCTGQLRLTLYGPGPPPGDTSQLESTPRAEPAVLFVGRGGTDNVVFAFENDATSSASTSGGGCADGMN-VSFADSAESGVWECCGEGSTLAGNFKSIDRLLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPCDWRSSLRWSNSSSSMERFS-PAPRAHHLAVVVDRGLYVSGGVG--IRGTLSDLWRRGDTSSEWTLLA 5434
S+PPT RQ PSPR GH+L+V+ G VY+FGGL+ C+SA+ S G G+ E C S E+W + P W +VL S + +P AR H K+IVFGG V SG + DG L D WE+D+ + T+ I EGG F+ + V G +Q +E+A G+C++D+ V+V + H CT Q++L LYGPGP D + E A P VLF GT + GGC + +F D A+ GV E G G+F+ ++L + ++ G+W LGV D DG G V W++ + MR CD + W+ ++S+ P+ RA AVVVD +++ GG+ R LSDLWR + WT L+
Sbjct: 22 LSDPPTGDRQVAPSPRRGHSLSVIYGHVYLFGGLTEGYDCNSAITDSLRYGSPYAGLSVEQCRALSDESNEVWRYSPVPNMWEKVLPSTA---SPPAREQHFGVTLDDKLIVFGGMCYVKGSGDEDDDAVVDGTAGTPEYLDDMWELDVGRLSYTHSITSEEYDMVIPEGGQAFMTMDVNRTGLKAGDGEGLGSSQGSEIA--DGLCIADIDVSVELRHPCTRQVQLVLYGPGPNDYDAN-FEPPAHAYPTVLFNYHDGTGG--------------RTAGGCGRNLEGTTFDDDADVGVHEAKSPG--FDGSFRPFEKL--STYHNLRPHGQWALGVYDRDTDGLTGVVSNWTIHLTMRECD--QTYHWTELATSVAAADRPSARARPAAVVVDGSIFMYGGMSGAPRTVLSDLWRFDRSEQTWTKLS 423
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A7S1U5V5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5V5_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.270e-36 Identity = 210/820 (25.61%), Postives = 313/820 (38.17%), Query Frame = 2
Query: 3944 LISSSDYNVRVTAVSRVGRGRPSALLSFSTEALPTNEWKQARGACYGITRVIPRPSRVEGRGRGLTGPALG------ENESWDTDSAAIETEIGGFSNPPTELRQEFPSPRSGHTLAVVAGKVYMFGGLSSNIQCS-SAMVGSTALGDTPGGVITENCIGADSFSAELWEFDPPLKQWTEVLVSGSGDGA--------------------------------PAARSGHTAS-VSGS-KMIVFGGRGNVSDSG---------------------FLQDG-QGSRTALLGDQWEIDLDPKQHVTVATNSSTAIREGGPTFIPLVVAVGQTDAQQAEVAMDTGMCVSDLTVAVHIDHGCTGQLRLTLYGPGPPPG-DTSQLESTPRAEPAVLFVGRGGTDNVVFAFENDATSSASTSGGGCADGMNVSFADSAESGVWECCGEGSTLAGNFKSIDRLLVGQFLHMPAEGEWTLGVLDT----GVDGSNGTVVGWSLDVEMRPCDWRSSLRWSNSSSSMERFSPAPRAHHLAVVVDRGLYVSGGVGIRGT-LSDLWRRGDTSSEWTLLAEGPGAPLGSTGPFNPH--GANVLVSPWGVLSIGGMPQRTGVGATSELWVLNPASNY------WRSVSGDGGTMLRPVGRYHG---AAAIVHGSPDYSTTNDTSHDKDVPG--------LLLFGGKDDWRRLDDLWRL-------KLSSISVPTSISTA-NSDIEWSARARAPRVRVQTVGPVIAPRPQSAGSWSLAELGRDERCAHVLI-SGTANDTWHASCGDGTDGEGGDGSCTMQAVLKMAWCLGEYQSVG 6112
LI +DY VRV S + A ++ T A N W+ G R R +R+ G GL+ +G E + +D D + + FS+ P ++ PSPR GH+L + VY+FGG C+ S + + + G G+ E C S ELW +D + +W ++ + G PA R H+AS + G+ K++VFGG DSG + G Q D WE+D+ V+ + I GG + A D + C+ D+ V + +DH C L +TL+GPGP P ++ E RAE LF G TD D T + S DG + S ES ++ + G + ++ LL QF A EWTL + D GVD GT+ W + C S W+ S +P R H AV+V LY+SGG L+DLWR T+ W L P P+N G +VSPWG+L+ GG R T + L ++Y W V + P+ + H A A ++ N ++V L L G +D +D W + +L+ + + A D S R A ++++ G V + G R+ C +L +G +W A C T + C+M+ VL+MAWCLG +Q+VG
Sbjct: 103 LIPETDYRVRVRIQSSRAQSDIFASVNVRTLATSANAWELIDGI-----RTYQR-ARLGG---GLSAHVMGTPHYSTEAQVFDDDESE---DAERFSDAPHHKKRAKPSPRRGHSLTTLHSYVYLFGGRGGGYDCTHSGSLDAVSSGTFVNGLPVERCSEQSGESNELWRYDTRIAEWEQLEFVNANSGFTSVGIGSTGTIDAPAGSFPDDNPERSLDNTEFPAPRERHSASPIPGTNKVLVFGGL-TAYDSGDDATADEDEVLTNTRTTPPTDTAETGEQAGYLTAFNDLWELDVGGVVTYEVSASPGATIPRGGSGIFLEIDATSIPDDR----------CIIDMHVQIQLDHDCANHLVMTLHGPGPEPYIKSANFEPFSRAEDVKLFSGAAETDGEAC---EDITLDGTFS-----DGASTGLRQSLESRLYHQK-TAADFTGAYAGVESLL-DQFGSGRAHAEWTLHLYDDRFPDGVDP--GTITDWKIKFWTVACT--PSFTWNKISEG----TPPARYDHAAVIVSDFLYISGGYSAENRILTDLWRFDITAQTWQELTVAPE-------PWNSEVSGRVGVVSPWGILAFGGYMHRRIADRTDDGGYLWDVASYDVVEQEWAPVEVSSANPVTPLVQLHRMPLANAAYDSGAEHGVANPDVRAREVTAPAGRHGAALALVGLFEDGAVIDTRWEVSRNTSESRLTDLLLHDPYLLAWGGDDGLSYRDDAFKLKLD--GAVS--KASLVGDLQDHHGLREAACGWILEPTGLGQASWFAGCAAPTPAAQVE-ECSMEDVLRMAWCLGTWQAVG 869
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A7S4K4G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4G5_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.250e-34 Identity = 131/497 (26.36%), Postives = 213/497 (42.86%), Query Frame = 2
Query: 3920 VLRAFLLGLISSSDYNVRVTAVSRVGRGRPSALLSFSTEALPTNEWKQARGACYGITRVIPRPSRVEGRGRGLTGPALGENESWDTDSAAIETEIGGFSNPPTELRQEFPSPRSGHTLAVVAGKVYMFGGLSSNIQCSSAMVGSTALGDTPGGVIT-ENCIGADSFSAELWEFDPPLKQWTEVLVSGSGDGAPAARSGHTAS-VSGSKMIVFGGRGNVSDSGFLQDGQGSRTALLGDQWEIDLDPKQ-HVTVATNSSTAIREGGPTFIPLVVAVGQTDAQQAEVAMDTGMCVSDLTVAVHIDHGCTGQLR-LTLYGPGPPPGDTSQLESTPRAEPAVLFVGRGGTDNVVFAFENDATSSASTSGGGCADGMNVSFADSAESGVWECCGEGSTLAGNFKSIDRLLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPCDWRSSLRWSNSSSSMERFSPAPRAHHLAVVVDRGLYVSGGVGIRGTLSDLWR 5398
V+ A + L+ + Y VR AVS G S LSF T P+N W+ + PR +D ++ +E PP P+ R GHTL ++ GKV++FGGLS C VG + GD ++ CI +S +LW+FDP W + S P R H+A+ + +++ GGR GQ LGD WE+ K H ++ + +G + + VA+ + + ++ +CV ++V V ++H C Q+ ++L+GPGP L + RG + + D + S+ S N++++DSA+ + + G F+ +RL F+ PAEGEWTL V D DG G++V W+L + ++PC + W+ S+ + PR H A+ V +++ GG+ + LSD+WR
Sbjct: 82 VVNATVSSLLPETPYCVRTVAVSNDGISHRSEALSFVTPESPSNSWRL----------LTPRA-----------------RSHYDKNTMCVE--------PP------HPTARRGHTLNLIDGKVFLFGGLSKGCSCG---VGVASAGDVERTIVDGRTCIVGALYSNDLWQFDPRTMIWEILQPISSNTEFPVGRELHSATTLPNGNLLIIGGR---------TGGQTGVQDFLGDVWEMSPGRKTTHAIPGSSLPAKLVDGNVLYHKVDVAIPRNG-----LTGNSDLCVDSISVEVALNHTCIEQIGYVSLFGPGPKTLSGVHLP-----------ISRGHQVKLFANAKIDRSCSSVMS--------NITYSDSAQDTILSHT-KLPVKTGRFQPSERLN-SHFVGSPAEGEWTLAVYDVSTDGERGSLVDWNLHLTVQPCSIHDEIAWTKKDSNGSSLNMPPRYLHTALSVGEEVFIVGGLSQK-RLSDMWR 498
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A6V2FVZ9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FVZ9_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.150e-28 Identity = 171/682 (25.07%), Postives = 275/682 (40.32%), Query Frame = 2
Query: 4247 PSPRSGHTLAVVAGKVYMFGGLSSNIQC---SSAMVGSTA-------LGDTPGGVITENCIGADSFSAELWEFDPPLKQWT----EVLVSGSGDGAPAARSGHTASV-SGSKMIVFGGRGNVSDSGFLQDGQGSRTALLGDQWEIDLDPKQHVT--VATNSSTAIREG-GPTFIPLVVAVGQTDAQQAEVAMDTG--MCVSDL-TVAVHIDHGCTGQLR-LTLYGPGPPPGDTSQLESTPRAEPAVLFVGRGGTDNVVFAFENDATSSASTSGGGCADGMNVSFADSAESGVWECCGEGSTL--AGNFKSIDRLLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPCDWRSSLRWSN-SSSSMERFSPA--------------------PRAHHLAVVVDRGL-YVSGGVGIRGTLSDLWRRGDTSSEWTLLAEGPGAPLGSTGPFNPHGANVLVSPWGVLSIGGMPQRTGVGATSELWVLNPASNYWRSVSG--DGGTMLR-----PVGRYHGAAAI--VHGSPDYSTTNDTSH-DKDVPGLLLFGGKDDWRR---LDDLWRLKLSSISVPTSISTANSDIEWSARARAPRVRVQTVGPVIAPRPQSAGSWSLAELGRDERC--AHVLISGTANDTWHASCGDGTDGEGGDGSCTMQAVLKMAWCLGEYQSV 6109
P R GH+L +V GKVY+FGG + C + +++ TA +G++ E C+ A ++S +LW F+P ++WT L P R H+A+V S +++ GG + S+ + + LGD WEI+L HV + S + +R G G + V ++A A G +CV D+ V V + H C Q+ + +YGP S R + +F T E+D +TS N++ +D A + + S L +G F+ + L F +P GEWT+ + ++ DG +G ++ W + +++ PC + +++W +++S E+ + A PR H AV V + YV GG G L+D+W+ S++WTLL G T +G + +++P+G++S GG+ R + W+ NP WR GTM P RY + G T+ H P LLFGG D DDLW I T N + G L+ + C H + +A W+ SCG+ G C + ++ +AWC EYQS+
Sbjct: 199 PPGRRGHSLTLVNGKVYLFGGATKMCTCGLSALSLMNITADMDHMRLIGNSQE---DEACVVATTYSNDLWSFNPLSRRWTLHWSPSLPPCDDHSIPCGREQHSATVLSSGSILIIGGLSSDSEHKLVA----TNPVFLGDLWEINLG---HVASFIVKGSFSFLRSGPGVELVDGNVLYHSSNAVGAGNDFSDGDEICVKDIRAVTVVLSHTCIEQIEYIAIYGP-------SLTSEHNRGQGVKIFSRSSST-------EHDGNCQNTTS--------NITLSDKASKTILDFS---SILPKSGQFRPPESLNAA-FSGLPVNGEWTIAIHESLGDGISGVLLDWRIHIDVVPC--KVAIQWKKITTNSCEKGNAAQGNICPQQSNEGDVKHDYFTPRYMHSAVSVGNDIIYVIGGAST-GNLNDMWKYDYGSNKWTLLN-------GRTKKHQ-YGQSFVLTPFGLISFGGVKSRMQYNIYRDTWLYNPFDEEWRPFGNAQKKGTMQNIVEETPKSRYLAGLCFMGIDGPIVLEQTHSIDHITSKNPQFLLFGGDSDITGNYLYDDLW------------IFTWNETL--------------------------FGKHLLSRQSQQAYCDLRHGKKNPSAISMWNLSCGEIASNSSRIG-CRWEDIILLAWCNEEYQSL 794
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A7S2KHI0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KHI0_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.710e-27 Identity = 171/714 (23.95%), Postives = 273/714 (38.24%), Query Frame = 2
Query: 4217 NPPTEL--RQEFPSPRSGHTLAV-VAGKVYMFGGLSSNIQCSSAMVGS--TALGDTPGGVITENCIGADSFSAELWEFDPPLKQWTEVLVSGSGDGAPAARSGHTASV-SGSKMIVFGGRGNVSDSGFLQDGQGSRTALLGDQWEIDLDP-KQHVTVATNSSTAIREGGPTFIPLVVAVGQTDAQQAEVAMDTG---MCVSDLTVAVHIDHGCTGQLRLTLYGPGPPPGDTSQLESTPRAEPAVLFVGRGGTDNVVFAFENDATSSASTSGGGCADGMNVSFADSAESGVWECCGEGSTLAGNFKSIDR---LLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPC------------DWRSSLRWSNSS------------------SSMERFSPAPRAHHLAVVVDRGLYVSGGVGIRGTLSDLWRRGDTSSEWTLLAEGPGAPLGSTGPFNPHGANVLVSPWGVLSIGGMPQRTGVGATSELWV--LNPASNYWRSVSGDGGTMLRPVG------------------RYHGAAAIVHGSPDYSTTN-----DTSHDKDVPGLLLFGGKDDWRR----LDDLWRLKLSSISVPTSISTANSDIEWSARARAPRVRVQTVGPVIAPRPQSAGSWSLAELGRDERCAHVLISGTANDTWHASCGDGTD-------GEGGDGSCTMQAVLKMAWCLGEYQSVGSPL 6121
N P L R + PSPR G ++ + V GK+Y+FGGL++ + + T+LG+ ++ N ELW+FDP + W ++ V G P R H+ASV S ++M+++GG+ D A LGD W +D+ H+ +N P +P V T + E + G MC+ ++ V V ++H CT + L L+GP + PR+ + + GTD+ + +D F+D A+ + + + ++ R L F P GEWTL V D+ VDG GT+ W L V+++PC D S+ +N + S E SP PR H A+ VD +++ GG R L D+WR + W LL E P + G ++ P G+++ GG+ T ++L + N + W S+ G +L RY +A++ S T +K P LLFGG + LDD+W LS++ V +L +D+ C +L+ T W+ +CG + E + C + + +MAWC EYQ+ SP+
Sbjct: 36 NSPKSLSSRMQRPSPRRGQSMTMEVNGKIYVFGGLATILASDLCEKDNFWTSLGEECKKMLPTN---------ELWQFDPVISSWKKIEVYGD---HPEGREQHSASVMSDNRMLIYGGKTTHFGPNKAYD------AFLGDLWLLDVGRITSHIIPGSNMQAL-----PLSLPEGETVYHTTIAEIESSDYVGLGEMCIVNVQVEVSLEHSCTKSISLALFGPV----TVTHNAHLPRSRGQRVELFPLGTDSACKSHLDDTI-----------------FSDRADHSILD-----QFITNPYRDEYRPSSSLSLAFEGAPVNGEWTLEVYDSEVDGRRGTLKDWKLHVDIQPCKDEFTWTKIHGPDCEKSIVTANPNGRADHKCIIDANGTSAPLSHTEISSPRPRYAHTAINVDDNVFIMGGFAGRN-LQDIWRYNYIENTWHLLKESQ-FPASTVA-----GKAAMIVPLGMIAFGGLHGTTTGSKIADLAIEKYNFSRAKWESLCTGGDELLDDTKEDCHKIERTSSKYSNFAPRYLASASLAGFSGGKLATKLKPSPVVLDEKRKPTFLLFGGDNGIFEYDALLDDMWASPLSTVVV-------------------------------------GYEETLMRPRQDDFCG-LLLDPTFT-YWNQTCGSSGNQTTQFIGDEHKNSVCEWKNIFEMAWCRQEYQTFISPV 654
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Match: A0A835Z5U9_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U9_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.150e-26 Identity = 180/634 (28.39%), Postives = 250/634 (39.43%), Query Frame = 2
Query: 3881 PSDSRAPGGAATAVLRAFLLGLISSSDYNVRVTAVSRVGRGRPSALLSFSTEALPTNEWKQARGACYGITRVIPRPSRVEGRGRGLTGPALGENESWDTDSAAIETEIGGFSNPPTELRQEFPSPRSGHTLAVVAGKVYMFGGLSSNI-QCSSAMVGSTALGDTPGGVI-TENCI-GADSFSAELWEFDPPLKQWTEV-LVSGSGDGAPAARSGHTAS-VSGSKMIVFGGRGNVSDSGFLQDGQGSRTALLGDQWEIDLDPKQHVTVATNSSTAIREGGPT---------FIPLVVAVGQ---TDAQQAEVAMD-TGMCVSD-LTVAVHIDHGCTGQLRLTLYGPGPPPGDTSQLESTPRAEPAVLFVGRGGTDNVVFAFENDATSSASTSGGGCADGMNVSFADSAESGVWECCGEGSTLAGNFKSIDRLLVGQFLHMPAEGEWTLGVLDTGVDGSNGTVVGWSLDVEMRPCD-------------WRSSLRWSN-SSSSMERFSPAPRAHHLAVVVDRGLYVSGGVGIRGT--LSDLWRRG-DTSS---EWTLLAEGPGAPLGSTGPFNPHGANVLVSPWGVLSIGGMPQRT-------------------GVGATSELWVLNPASNYWRSV 5608
P D AP AT L GL+ Y R A R +A L+ A P N W+Q T V V L+GP LG + +A P R EF + R+ H+ A VAG VY+FGG ++ C CI G+ S +LW F+P W V ++SG PA R HTA+ + GS M V GG G DG ++ W ID+ P+ +TAI EG T + V VG A VA D MCV+ LTV + + H C QLR+ L GPGP D + + RA +V + F +D A GG DG+ F D+A + + LA + ++ LL F P G WTL V D VDGS G + W+L + PC S L W +++ PAPR +H+AV ++V+GG G G +L+R D S WT L APL + GA ++++P G+L++GG+ R GVG +++ ++ S WR+V
Sbjct: 555 PHDGAAPWVTAT------LHGLLPGVPYAARACAAPR--GDNCTAPLALPPRAPPANAWRQLAPRYRSPTAVGGLLDPV------LSGPHLGAYSQAASAAA------------PGPFRGEFGALRA-HSAASVAGAVYVFGGAAAGAADCXXXXXXXXXXXXXXXXXXGAAPCISGSADVSDQLWRFEPATAAWEAVPVLSGGAAPPPAPRRAHTATPLGGSAMAVLGGVG--------ADGAPLPLDVV---WRIDVQPEAQAEAQWRGATAIVEGAYTQASGARQRDAVAGTVTVGMHLPAAVSAATVAPDGRPMCVAGALTVTLSLQHPCLRQLRVELRGPGPRTADAN-FNAADRAASSVTLL----------RFADDGAVRAGACYGGGLDGLV--FDDAAP----QPDDDPPALASPHRPLEALLPA-FDGAPVAGNWTLAVYDALVDGSAGVITAWTLTLRACPCSAAXXXXXXXXXXXXASPLAWEAVAATGGPDAPPAPRYNHVAVAAGGAVWVAGGQGAGGLSLARELFRLDFDAQSGTGNWTQLRP-RAAPLATPAGA---GAQLVLAPQGLLAVGGVRARGAASLSXXXXXXXXXXXTGWGVGDALQVFAMDMVSKVWRAV 1128 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1278.2312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1278.2312.1 >prot_H-canaliculatus_F_contig1278.2312.1 ID=prot_H-canaliculatus_F_contig1278.2312.1|Name=mRNA_H-canaliculatus_F_contig1278.2312.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1454bp MSLGSALGTVSGIFTDATPGVPTPKAPRFSSSTSSSITVFVDTVGGDSAAback to top mRNA from alignment at H-canaliculatus_F_contig1278:6874..25734- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1278.2312.1 ID=mRNA_H-canaliculatus_F_contig1278.2312.1|Name=mRNA_H-canaliculatus_F_contig1278.2312.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=18861bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1278:6874..25734- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1278:6874..25734- >mRNA_H-canaliculatus_F_contig1278.2312.1 ID=mRNA_H-canaliculatus_F_contig1278.2312.1|Name=mRNA_H-canaliculatus_F_contig1278.2312.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=8724bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1278:6874..25734- (Hapterophycus canaliculatus Oshoro5f female)back to top |