mRNA_H-canaliculatus_F_contig12779.2310.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: D7FXT2_ECTSI (Putative subunit of the Anaphase Promoting Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT2_ECTSI) HSP 1 Score: 224 bits (570), Expect = 5.730e-70 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEY 327
HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLD+LSTTLWHLKRDVELSYLAQKVSEFDR SP TWCVVGNCFSLQKEHETALRFFQRAIQLD+DMTYAYTLCGHEY
Sbjct: 121 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDLLSTTLWHLKRDVELSYLAQKVSEFDRRSPQTWCVVGNCFSLQKEHETALRFFQRAIQLDADMTYAYTLCGHEY 229
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A6H5JEK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK2_9PHAE) HSP 1 Score: 224 bits (570), Expect = 5.990e-66 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEY 327
HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLD+LSTTLWHLKRDVELSYLAQKVSEFDR SP TWCVVGNCFSLQKEHETALRFFQRAIQLD+DMTYAYTLCGHEY
Sbjct: 676 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDLLSTTLWHLKRDVELSYLAQKVSEFDRRSPQTWCVVGNCFSLQKEHETALRFFQRAIQLDADMTYAYTLCGHEY 784
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A7S4QN69_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QN69_9STRA) HSP 1 Score: 196 bits (498), Expect = 7.130e-56 Identity = 91/121 (75.21%), Postives = 107/121 (88.43%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDFDK-VRC 360
HQVGRAYFE ADY N+K ALE+MQR +PHRM+GL+VLSTTLWHLK++VELS LAQ+ +FDR+SP +WCVVGNCFSLQKEHETAL FF+R+IQ+DS TY+YTL GHEYV+NEDFDK V C
Sbjct: 720 HQVGRAYFEMADYQNSKRALETMQRVEPHRMKGLEVLSTTLWHLKKEVELSDLAQRAVDFDRMSPESWCVVGNCFSLQKEHETALTFFRRSIQVDSSFTYSYTLSGHEYVSNEDFDKAVSC 840
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A7S1URM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URM1_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.880e-55 Identity = 80/116 (68.97%), Postives = 102/116 (87.93%), Query Frame = 1
Query: 4 QVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDFDK 351
QVGRAYFE ADYGN+ L+ M++ +PHRM+G++VLST LWH++R+VELS+LAQ+V+EFDR++P TWCVVGNCFSLQK+HETAL FF+R+IQLDS YA+TL GHE+ ANEDF+K
Sbjct: 64 QVGRAYFEMADYGNSIRYLQMMEQTEPHRMKGVEVLSTALWHMRREVELSHLAQRVTEFDRMAPETWCVVGNCFSLQKDHETALTFFRRSIQLDSTFAYAHTLSGHEHFANEDFEK 179
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: B8BVV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVV5_THAPS) HSP 1 Score: 177 bits (449), Expect = 2.170e-52 Identity = 79/117 (67.52%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDFDK 351
HQ+G+AYFE +DY NA+ AL MQR +PHRM+GLD+LST LWHLK++VELS LAQK +FDR+SP W VVGNCFS QKE ETA+ FF R+IQLD TYA+T+CGHEY++NEDF+K
Sbjct: 67 HQIGKAYFEMSDYQNAERALGKMQRAEPHRMKGLDILSTALWHLKKEVELSDLAQKAVDFDRMSPEAWFVVGNCFSFQKEQETAITFFHRSIQLDPTYTYAHTMCGHEYMSNEDFEK 183
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A7S2XUI4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XUI4_9STRA) HSP 1 Score: 184 bits (468), Expect = 3.640e-52 Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDF 345
HQVGRA+FE ADY NA+ ALE+MQR +PHRM+GL+VLSTTLWHLK++VELS+LAQ +FDRLS WCVVGNCFSLQKEHETAL FF+R+IQLD TY++TL GHEYV+NEDF
Sbjct: 504 HQVGRAFFEMADYENAQRALETMQRLEPHRMKGLEVLSTTLWHLKKEVELSHLAQHAVDFDRLSAEAWCVVGNCFSLQKEHETALTFFRRSIQLDPSFTYSHTLSGHEYVSNEDF 618
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A7S3VB12_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB12_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.740e-51 Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDFD 348
HQVGRAYF DY NA+ ALE+MQ+ +PHRM GL++LSTTLW LK++VELS LAQ+VS+FDRL P TWCVVGNCFSLQKEH+TAL FF+R+IQLD TYA+TL GHEYVANEDFD
Sbjct: 768 HQVGRAYFALVDYTNAQRALETMQQVEPHRMRGLELLSTTLWLLKKEVELSNLAQRVSDFDRLCPETWCVVGNCFSLQKEHKTALTFFRRSIQLDPTFTYAHTLSGHEYVANEDFD 883
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A1E7FSU3_9STRA (TPR-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSU3_9STRA) HSP 1 Score: 173 bits (439), Expect = 4.830e-51 Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDFDK 351
HQ GRAYFE A+Y NA+ LE MQ +PHRM+GLD+LST LW LK++VEL++LAQ+ +FDRL+P WCVVGNCFSLQKEHETAL FF R++QLD TY +TL G+EY+ANEDFDK
Sbjct: 52 HQEGRAYFEMAEYQNAQRCLELMQGVEPHRMKGLDLLSTVLWQLKKEVELAHLAQRTVDFDRLAPEAWCVVGNCFSLQKEHETALVFFGRSLQLDPSFTYTHTLSGYEYMANEDFDK 168
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A7S4N5K4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5K4_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.870e-50 Identity = 83/121 (68.60%), Postives = 103/121 (85.12%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDFDK-VRC 360
HQVGRA+FE ADY +A+ ALE+M R +PHRM+GL+VLST LWHLK++VELS+LAQ +FDR +P +WCVVGNCFSL KEHETAL FF+R+++LD TY++TL GHEYVANEDFDK V+C
Sbjct: 756 HQVGRAHFEMADYHSAQRALEAMHRAEPHRMKGLEVLSTALWHLKKEVELSHLAQTAVDFDRHAPESWCVVGNCFSLHKEHETALTFFRRSVRLDPTFTYSHTLSGHEYVANEDFDKAVQC 876
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Match: A0A7R9ZMF0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZMF0_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.570e-50 Identity = 73/116 (62.93%), Postives = 92/116 (79.31%), Query Frame = 1
Query: 1 HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELSYLAQKVSEFDRLSPYTWCVVGNCFSLQKEHETALRFFQRAIQLDSDMTYAYTLCGHEYVANEDFD 348
H G+AY E +DY NA+ +LE MQR +PHR +GL++LST W LK+DVEL+YLAQK +FDR+SP WC+VGNC SLQKEHETAL FF R++QLD TY +TL G+EY+ANEDF+
Sbjct: 31 HMEGKAYLEMSDYRNAQRSLERMQRVEPHRSKGLELLSTVFWQLKKDVELAYLAQKAVDFDRMSPEAWCIVGNCLSLQKEHETALVFFGRSLQLDPSFTYTHTLSGYEYMANEDFE 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12779.2310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12779.2310.1 >prot_H-canaliculatus_F_contig12779.2310.1 ID=prot_H-canaliculatus_F_contig12779.2310.1|Name=mRNA_H-canaliculatus_F_contig12779.2310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=121bp HQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDVLSTTLWHLKRDVELback to top mRNA from alignment at H-canaliculatus_F_contig12779:995..3197+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12779.2310.1 ID=mRNA_H-canaliculatus_F_contig12779.2310.1|Name=mRNA_H-canaliculatus_F_contig12779.2310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2203bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12779:995..3197+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12779:995..3197+ >mRNA_H-canaliculatus_F_contig12779.2310.1 ID=mRNA_H-canaliculatus_F_contig12779.2310.1|Name=mRNA_H-canaliculatus_F_contig12779.2310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=726bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12779:995..3197+ (Hapterophycus canaliculatus Oshoro5f female)back to top |