mRNA_H-canaliculatus_F_contig1275.2290.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: D8LU79_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU79_ECTSI) HSP 1 Score: 459 bits (1182), Expect = 4.440e-159 Identity = 222/240 (92.50%), Postives = 233/240 (97.08%), Query Frame = 3
Query: 717 MAEAEAVSAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPAEAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAREEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
MAEAEA+SAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPA AY FTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEK+RE E AR+R+STE+ NP+LYFMKQTVGNACGTVGLLHCALNAS+SKGI+LDK+CFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQ+GQSDQIAREEKINTHFVCLTE+DG LYELDGRKEGPVPHGSTSPATLLQDAC VVKQFMDRDPGELR
Sbjct: 1 MAEAEALSAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPAGAYSFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKHREEEAARVRESTESLNPKLYFMKQTVGNACGTVGLLHCALNASISKGITLDKECFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQEGQSDQIAREEKINTHFVCLTEMDGTLYELDGRKEGPVPHGSTSPATLLQDACAVVKQFMDRDPGELR 240
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: A0A1V9YLF7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLF7_9STRA) HSP 1 Score: 265 bits (676), Expect = 9.450e-83 Identity = 134/223 (60.09%), Postives = 166/223 (74.44%), Query Frame = 3
Query: 774 KRWFPLESNPDVMNKYIAKMGWPAE-AYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
KRWFPLESNP VMN+YI +MG PA+ A+ F DVYSTEDWAL MVP+PVL V+MLFPIK TE Y +AE R+ + + +P +Y+MKQTVGNACGTVG+LH NA + ++ FL F+ KTR TPA+IA+ L ++DELEE H AAQ+GQSDQ+ ++ INTHFVCL+ VDG LYELDGRK P+ HG +S ATLL+DAC VV+ FM RD GE+R
Sbjct: 10 KRWFPLESNPAVMNEYIKRMGLPADSAFEFCDVYSTEDWALDMVPRPVLAVIMLFPIKAHTEAYAKAEHERIEKNGQAVSPNVYYMKQTVGNACGTVGILHALGNAG--EHMTFTHGSFLQSFFAKTRDKTPAEIAEILEEDDELEETHASAAQEGQSDQLEHIDDPINTHFVCLSVVDGHLYELDGRKAFPINHGPSSSATLLEDACRVVRDFMQRDEGEVR 230
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: A0A3F2RNT3_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNT3_9STRA) HSP 1 Score: 250 bits (639), Expect = 3.120e-77 Identity = 121/222 (54.50%), Postives = 159/222 (71.62%), Query Frame = 3
Query: 774 KRWFPLESNPDVMNKYIAKMGWPAEAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
KRWFPLESNPDVMN Y+ KMG+P + + F DV STE+WAL MVP PV+ V+MLFPIK TE+ + E R+ +T +P +Y+M+QTVGNACGTVG+LH N + + L +L +F+ KT+ TP +IAQ L ++DELEE H AA+ GQS+Q+ ++ INTHFVC + VDG LYELDGRK+ P+ HG +SP T+L DAC +K+FM RD GE+R
Sbjct: 9 KRWFPLESNPDVMNNYVEKMGFPTDQFSFCDVLSTEEWALGMVPSPVVAVIMLFPIKPHTEEAAKQEAVRIEREGQTVSPNVYYMRQTVGNACGTVGILHAIGN--MRHLVQLTPGSYLDKFFNKTKTKTPKEIAQYLEEDDELEETHGSAAEAGQSEQLETVDDPINTHFVCFSHVDGHLYELDGRKKHPINHGPSSPTTVLPDACAEIKKFMARDEGEMR 228
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: H3H379_PHYRM (Ubiquitin carboxyl-terminal hydrolase n=15 Tax=Phytophthora TaxID=4783 RepID=H3H379_PHYRM) HSP 1 Score: 249 bits (636), Expect = 8.770e-77 Identity = 125/229 (54.59%), Postives = 163/229 (71.18%), Query Frame = 3
Query: 759 SDKGRK--RWFPLESNPDVMNKYIAKMGWPAEAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
SD+G K RWFPLESNP+VMN Y+ KMG+P A+ F DV STE+WALAMVP PV+ V+MLFPIK TE+ + E R+ + +P +Y+M+QTVGNACGTVG+LH N + + L +L +F+ T+ TP +IAQ L ++DELEE H AA+ GQS+Q+ ++ INTHFVC + VDG LYELDGRK+ P+ HG +SP TLLQDAC +K+FM RD GE+R
Sbjct: 2 SDEGNKHKRWFPLESNPEVMNAYVEKMGFPTTAFSFCDVLSTEEWALAMVPSPVVAVIMLFPIKPHTEEADKQEAKRIEKDGQIMSPNVYYMRQTVGNACGTVGILHAIGN--MRHLVRLTPGSYLDKFFNTTKTKTPEEIAQYLEEDDELEETHGSAAEAGQSEQLESVDDPINTHFVCFSCVDGTLYELDGRKKRPINHGPSSPDTLLQDACQAIKKFMARDEGEMR 228
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: A0A7S1C7C4_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7C4_9STRA) HSP 1 Score: 249 bits (637), Expect = 3.220e-76 Identity = 124/240 (51.67%), Postives = 165/240 (68.75%), Query Frame = 3
Query: 726 AEAVSAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPAEAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKG---ISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAREEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
++ AP+ K +KRWFPLESNP VMNKY+ K+G+P Y +V ST+DWAL MVP+PV+GVVMLFP+K+++EK+R E AR+ + E+Y+ KQTVGNACGT+GLLH A NA+ G + L +D +L+RF +T+ +TP + A AL D+DELEE H AA +GQ+ +E +N HFV + V G L ELDGRK+ P+ HG T+P TLL DAC VV+ FM RDP E+R
Sbjct: 38 SKEAEAPAEGGKKKRKKRWFPLESNPHVMNKYLEKLGFPTMMYHTVEVMSTDDWALDMVPKPVIGVVMLFPVKDASEKHRHEEAARIAAEGQDLPAEVYYTKQTVGNACGTIGLLHVAANATSFAGSDLVPLGEDSWLYRFLARTKDMTPDERAAALEDDDELEESHGAAASEGQTTVPDIDESVNAHFVAFSNVKGKLVELDGRKKSPIVHGDTTPETLLADACKVVRDFMARDPDEVR 277
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: A0A067C1R0_SAPPC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1R0_SAPPC) HSP 1 Score: 247 bits (630), Expect = 9.310e-76 Identity = 128/227 (56.39%), Postives = 157/227 (69.16%), Query Frame = 3
Query: 762 DKGRKRWFPLESNPDVMNKYIAKMGWPAE-AYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
D KRWFPLESNP VMN+Y +MG PA+ A+ F DVYSTEDWAL MV +PVL V+MLFPIK TE Y + E R+ S + +P +Y+MKQTVGNACGTVG+LH N V ++ FL F+EKTR TP +IA L +DELEE H AAQ+GQS+Q+ ++ INTHFVC VD LYELDGRK P+ HG +S TLL+DAC V++ FM RD GE+R
Sbjct: 6 DAKAKRWFPLESNPQVMNEYAKRMGLPADSAFEFCDVYSTEDWALDMVLRPVLAVIMLFPIKTHTEAYAKEERQRIEASGQVVSPNVYYMKQTVGNACGTVGILHALGN--VGDYVAYQPGSFLQTFFEKTRAKTPEEIAVILEGDDELEETHASAAQEGQSEQLEHVDDPINTHFVCFCTVDDHLYELDGRKAFPINHGPSSRETLLEDACRVIQSFMQRDDGEVR 230
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: A0A485KZ13_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ13_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.220e-75 Identity = 127/229 (55.46%), Postives = 166/229 (72.49%), Query Frame = 3
Query: 759 SDKGR-KRWFPLESNPDVMNKYIAKMGWPAEA-YRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
+++GR KRWFPLESNP VMN+YI +MG P ++ + F DVYSTEDWA+ MV +PVL VVMLFPIK+++E Y + E AR+ + + + +Y+MKQTVGNACGTVG+LH NA + D FL F+ KT+ TP ++A L +DELEE H AAQ GQS+Q+ ++ INTHFVC + VDG LYELDGRK+ P+ HG +S TLL+DACGV++QFM RD GE+R
Sbjct: 7 NERGRNKRWFPLESNPHVMNEYIKRMGIPDDSDFAFCDVYSTEDWAMDMVLRPVLAVVMLFPIKDASESYAKEERARIENEGQVVSDNVYYMKQTVGNACGTVGILHALGNAR--HVLPPRPDSFLATFFAKTQDKTPEEMAAILEADDELEETHASAAQAGQSEQLEHVDDPINTHFVCFSAVDGHLYELDGRKQFPINHGPSSSDTLLEDACGVIQQFMARDKGEVR 233
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: M4BQF5_HYAAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQF5_HYAAE) HSP 1 Score: 244 bits (622), Expect = 1.060e-74 Identity = 122/228 (53.51%), Postives = 163/228 (71.49%), Query Frame = 3
Query: 759 SDKG-RKRWFPLESNPDVMNKYIAKMGWPAEAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
SD+G RKRWFPLESNPDVMN Y+ KMG+P + F DV STE+WAL MV P++ V+MLFPIK TE+ + E AR+ +T +P++Y+M+QTVGNACGTVG+LH N + + L +L +F+ T+ TP +IAQ L ++DELE+ H AA+ GQS+Q+ ++ INTHFVC + VDG LYELDGRK+ P+ HG +S T+LQDAC V+K+FM RD E+R
Sbjct: 2 SDEGKRKRWFPLESNPDVMNAYVKKMGFPTSQFSFCDVLSTEEWALGMVSTPIVAVLMLFPIKPHTEEADKQEAARIEKEGQTVSPDVYYMRQTVGNACGTVGILHAVGN--MRHLVQLAPGSYLDKFFNTTKTKTPQEIAQYLEEDDELEKTHGGAAEAGQSEQLQSVDDPINTHFVCFSCVDGNLYELDGRKKSPINHGPSSQETILQDACKVIKKFMARDENEMR 227
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: A0A0G4F8F1_VITBC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8F1_VITBC) HSP 1 Score: 243 bits (621), Expect = 1.400e-74 Identity = 122/224 (54.46%), Postives = 159/224 (70.98%), Query Frame = 3
Query: 765 KGRKRWFPLESNPDVMNKYIAKMGWPAEAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAREEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
K K+W PLE+NPDVM +YI K+G P + DV +TEDWAL MVP+PV G+++LFPIK++TEK+RE E AR++ + +T +P++YF KQTVGNACGTVG+LH LN + L + F ++F KT L+P Q A+AL ++DE+EE H E QQGQS R+ ++ THF L E+DG LYELDGRKE P+ HG +SP T L+DA V QFM RDPGELR
Sbjct: 7 KSHKKWLPLEANPDVMTEYIMKLGGPP--VQCVDVLTTEDWALDMVPKPVYGLILLFPIKDTTEKHREEEAARVKANGQTVSPKVYFTKQTVGNACGTVGILHTVLNIRDKQ--PLGAEGFFNKFLTKTMPLSPDQRAEALEEDDEIEEAHTEVEQQGQSRVPTRDAQVETHFAALIEMDGCLYELDGRKEFPINHGPSSPGTFLKDAVRVAGQFMARDPGELR 226
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Match: A0A8K1FQY3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQY3_PYTOL) HSP 1 Score: 242 bits (618), Expect = 4.620e-74 Identity = 118/224 (52.68%), Postives = 162/224 (72.32%), Query Frame = 3
Query: 768 GRKRWFPLESNPDVMNKYIAKMGWPAEAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREAEEARMRDSTETPNPELYFMKQTVGNACGTVGLLHCALNASVSKGISLDKDCFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKINTHFVCLTEVDGVLYELDGRKEGPVPHGSTSPATLLQDACGVVKQFMDRDPGELR 1436
G KRWFPLESNP VMN Y+ K+G+P + F DV STEDWAL MVP+PV+GV+MLFPIK+ TE + + E AR+ + +P +Y+MKQTVGNACGT+GLLH N + + +++ +L + + +T TP +IA L ++DELE+ HE AAQ+GQS+Q+ ++ ++THF+C + VDG LYELDGRK+ P+ HG +S TLL DAC V++QFM RD GE+R
Sbjct: 7 GGKRWFPLESNPAVMNTYVEKLGFPTSDFSFCDVLSTEDWALDMVPKPVVGVLMLFPIKKHTEAFAKEEAARIEKDGQVVSPHVYYMKQTVGNACGTIGLLHAIGN--MRQHVTIPATSYLGKLFNQTVGQTPDKIADYLEEDDELEDTHESAAQEGQSEQVEDVDDPVDTHFICFSCVDGHLYELDGRKKFPINHGPSSQETLLSDACKVIQQFMVRDEGEVR 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1275.2290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1275.2290.1 >prot_H-canaliculatus_F_contig1275.2290.1 ID=prot_H-canaliculatus_F_contig1275.2290.1|Name=mRNA_H-canaliculatus_F_contig1275.2290.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=240bp MAEAEAVSAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPAEAYRFTDback to top mRNA from alignment at H-canaliculatus_F_contig1275:41..6763+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1275.2290.1 ID=mRNA_H-canaliculatus_F_contig1275.2290.1|Name=mRNA_H-canaliculatus_F_contig1275.2290.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6723bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1275:41..6763+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1275:41..6763+ >mRNA_H-canaliculatus_F_contig1275.2290.1 ID=mRNA_H-canaliculatus_F_contig1275.2290.1|Name=mRNA_H-canaliculatus_F_contig1275.2290.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1440bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1275:41..6763+ (Hapterophycus canaliculatus Oshoro5f female)back to top |