mRNA_H-canaliculatus_F_contig12737.2282.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: D7FLN1_ECTSI (Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN1_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 1.460e-175 Identity = 326/382 (85.34%), Postives = 336/382 (87.96%), Query Frame = 1
Query: 1 STFLSGERTTIADVALACASSRILEGG-GGGAGALGARDLAGVPHVLRWYRTVTHHPAFSAPTAGASSASRALPAAKNQGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGGGAAAGDEPLPVVGESGDLTSSASVVQGARRLEQAPARFRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKDAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGGEGNGHAGA-GGGPPMTAAGTVDYSK 1140
STFL GERTTIADV LACA+ ++EG GGA +LGARDLAG+PHVLRWYRTVTHHPAFSA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGDEPLPVVGESGDL SSASVVQG+RRLE APARFRRKRVRVRELLA+G ++VGQKAVVKGWLRTAR+ASKGALLFLVVDDGSCS TVQVVVSK APGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGG EGNGHA A GGGPPMT AG VDYSK
Sbjct: 165 STFLVGERTTIADVGLACAARDLIEGSVAGGAASLGARDLAGLPHVLRWYRTVTHHPAFSATAVXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEPLPVVGESGDLMSSASVVQGSRRLEVAPARFRRKRVRVRELLASGTSVVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGEEGNGHAAAAGGGPPMTPAGAVDYSK 532
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: A0A835YW11_9STRA (Asparagine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW11_9STRA) HSP 1 Score: 298 bits (764), Expect = 6.980e-91 Identity = 204/381 (53.54%), Postives = 252/381 (66.14%), Query Frame = 1
Query: 4 TFLSGERTTIADVALACASSRILEGGGGGAGALGARDLAGVPHVLRWYRTVTHHPAFSAPTAGASSASRALPAAKNQGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGGGAAAGDEPLPVVGESGDLTSSASVVQGARRLEQAPARFRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKDAP-GFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGGEGNGHAGAGGGP-PMTAAGTVDYSK 1140
T+L G R T AD+ALACA+ IL G A L +DLA +PH RWY TVTHH AF+ T+ XXXXXXXXXXXXXXXXXXXXXXX A D+PL +V APA++RR+RVRV+ELLA G A G+ VV+GWL+TARS +K LLFLVV+DGSC ++QVV S+D GF AAASCGGVGA V+V G ++ S KGQ +E++A +VEVLG VY+ DG++GA+ YPLAKKAHSLE+LR+ AHLRPRT ++SA MRVR+AMA+ATH+FFN+RGF+Y+HTP++TGADCEGAGEQF V+TLLP A GHA G P A G++DY+K
Sbjct: 160 TYLVGNRLTAADIALACAAQPIL---GAAASVLSGKDLATLPHAARWYMTVTHHAAFATGTSX---------------------XXXXXXXXXXXXXXXXXXXXXXXANSTVDAAFYQASAVHTDKPLSMV---------------------APAKYRRRRVRVKELLARGAAAAGETVVVRGWLKTARSGAKDTLLFLVVNDGSCHSSLQVVASRDGTEGFAAAASCGGVGACVAVEGPIIESPAKGQVIEMQAKKVEVLGPVYQSDGSIGAADYPLAKKAHSLEYLRTHAHLRPRTMVYSAVMRVRNAMAYATHRFFNERGFVYVHTPLLTGADCEGAGEQFVVTTLLPAAA----EGHACGGRVELPRLADGSIDYTK 491
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: K3WS62_GLOUD (Asparagine--tRNA ligase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WS62_GLOUD) HSP 1 Score: 225 bits (574), Expect = 1.680e-65 Identity = 118/198 (59.60%), Postives = 148/198 (74.75%), Query Frame = 1
Query: 460 APARFRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKDAP-GFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLL 1050
AP FRR R+RV+ELLA G L GQ VKGW +T R A GA FL V DGSC +VQVV+++++ GF+AA GGVGAS +V+GTVV S KGQ +E+KAD+VE+ G + +P +TYP++KK H+LE LR AHLRPR+ +H AAMRVR+AMAFATH+FFN RGFLYIHTPI+T +DCEGAGE F+V+T L
Sbjct: 13 APTLFRRSRIRVKELLARGLELEGQSVTVKGWAKTLREAGAGAFAFLEVSDGSCFASVQVVITRESTEGFEAALESGGVGASFAVVGTVVKSPAKGQVIEVKADKVELYGGIPDP------ATYPMSKKRHTLEHLRQHAHLRPRSNIHGAAMRVRNAMAFATHEFFNSRGFLYIHTPIITESDCEGAGEMFSVTTFL 204
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: W7TB32_9STRA (Asparagine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TB32_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.250e-64 Identity = 159/390 (40.77%), Postives = 211/390 (54.10%), Query Frame = 1
Query: 1 STFLSGERTTIADVALACASSRILEGGGGGAGALGARDLAGVPHVLRWYRTVTHHPAFSAPTAGASSASRALPAAKNQ--GKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGGGAAAGDEPL-PVVGESGDLTSSASVVQGARRLEQAPARFRRKRVRVRELLAN-GPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKD-APGFDAA--ASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYE-PDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGGEGNGHAGAGGGP--PMTAAGTVDYSK 1140
STFL+G + T+ADV + CA ++ G AG++ L P VLRW+ T+ H P F + G + + L A + AGGG ++ PL P G L F R+R +++LL G A VG+ +KGW+RT R+ +KGALLF+ ++DGS + ++Q V+ D GF A ASCGGVGAS S+ GT+V S +GQ VE+ A VEVLG VY DG VG YPL+KKAHS+E+LR AHLR RT++ + MRVRHAMA+ATHKFFNDRGF Y+HTP++TGADCEGAGE F V+TLLP+ G P P+ G++DYS+
Sbjct: 148 STFLAGHKVTLADVGVFCALYDLV--GVENAGSMSIA-LENFPGVLRWFLTLLHQPCFQHVSPGEADKMKRLQAKLPSVGSTRRKLAEGPLAENGNRRPSKAGIAGARATQASAAKSGPAGGGRSSTKPPLLPKDGPDSSL-------------------FDRRRTVIKQLLVERGEAAVGETVTIKGWVRTIRAGNKGALLFIELNDGSTALSMQAVLEADKTQGFAEATPASCGGVGASFSITGTLVRSPAEGQAVELHATVVEVLGKVYGGEDGGVGGKLYPLSKKAHSMEYLRCNAHLRARTRVTGSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPEK------------GAPRLPIRPDGSIDYSQ 503
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: A0A8J2SLQ1_9STRA (Asparagine--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLQ1_9STRA) HSP 1 Score: 227 bits (579), Expect = 4.160e-64 Identity = 166/385 (43.12%), Postives = 207/385 (53.77%), Query Frame = 1
Query: 4 TFLSGERTTIADVALACASSRILEGGGGGAGALGARDLAGVPHVLRWYRTVTHHPAFSAPTAGASS---ASRALPAAKNQGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGGGAAAGDEPLPVVGESGDLTSSASVVQGARRLEQAPARFRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKDAP-GFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYE-PDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGGEGNGHAGAGGGPPM-TAAGTVDYSK 1140
T+L+G+R + AD A+ C L+ L A G P +LRWY T H PAFS+ GA + A +ALPA K + AAA + P +A V R L F R R R++ELL G A VG VV GW+RT R A KGA LF+ ++DGSC ++QVV D+ GF AA +CGG GAS+ V G VV S GKGQ +EI A + VLGC P TVGA TYPLAKK H+LE LR+ AHLRPR+++ SA +R+R+A+AFATH+FF RGFLY+HTP++T ADCEGAGEQF V+TLLP H A P + T G VDYSK
Sbjct: 162 TYLAGDRVSAADCAVVCVLRAALKN------QLIATSKLG-PSLLRWYLTCLHAPAFSS-ILGADAKNDALKALPAGKAPTSKKT--------------------------------------AAAKAKASP----------TAKAVADPRTLFTPT--FARSRERLKELLGRGAAAVGATVVVAGWVRTLREAMKGATLFVELNDGSCLASIQVVCGSDSTEGFAAAKACGGAGASLRVEGAVVESPGKGQTIEILAKAITVLGCTRGGPGRTVGAQTYPLAKKYHTLEHLRTHAHLRPRSRVGSAVVRLRNALAFATHEFFQQRGFLYVHTPLITAADCEGAGEQFTVTTLLPPE-------HDKA---PKLPTVDGRVDYSK 478
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: A0A662YCZ1_9STRA (Asparagine--tRNA ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCZ1_9STRA) HSP 1 Score: 221 bits (563), Expect = 6.870e-64 Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = 1
Query: 472 FRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKD-APGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLL---PDAGGGEGNGHAGAGGGPPMTAAGTVDYSK 1140
FRR RVRV+ELLA G AL GQ VKGW +T R A GA FL + DGSC VQ+V+SK+ GF A + GGVGAS SV+GTVV S KGQ+VE+KA +V V G + PD ++TYP++KK H+LE LR+ AHLRPR+ +H AAMRVR+AMAFATH+FFN RGFLYIHTPI+T +DCEGAGE F V+TL+ PD G P+T VD+SK
Sbjct: 17 FRRNRVRVKELLAGGLALEGQTVTVKGWAKTLREAGAGAFAFLELSDGSCFAGVQIVISKEETEGFADAMASGGVGASFSVVGTVVKSPAKGQEVEVKATKVTVYGGI--PD----SATYPMSKKRHTLEHLRAHAHLRPRSNIHGAAMRVRNAMAFATHEFFNTRGFLYIHTPIITESDCEGAGEMFGVTTLMSKHPD-------------GKLPVTKDNKVDFSK 224
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: A0A7S2WSY6_9STRA (Asparagine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSY6_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.640e-63 Identity = 126/237 (53.16%), Postives = 159/237 (67.09%), Query Frame = 1
Query: 460 APA-RFRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKDAPGFDAAAS--CGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGT-VGASTYPLAK--KAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGGEGNGHAGAGGGP----PMTAAGTVDYSK 1140
APA RF+RKR+R+ EL+ G LVG+ VV+GW +T R A KG++LF+ + DGS S VQVVV GF+AA CGG AS S+ G VV S+G GQ +E++A +VEVLG V+ DG G YPLA+ K HS EFLRS+AHLRPRT+ +A RVR AMA+ATH+FFN+RGFLYIHTP++TGADCEGAGE F+V+TL+ D P P T G +D+SK
Sbjct: 24 APAMRFKRKRIRIAELMQLGTTLVGKTVVVQGWAKTIREAGKGSILFIQLSDGSSSGDVQVVVDAGVEGFEAARPNVCGGTDASFSISGKVVESQGAGQSIELQAVKVEVLGQVFAGDGDQAGGKFYPLARNRKGHSFEFLRSVAHLRPRTRAFAAVQRVRSAMAYATHQFFNERGFLYIHTPLITGADCEGAGEMFSVTTLIKD---------------PKEPLPTTKDGAIDFSK 245
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: H3G8N3_PHYRM (Asparagine--tRNA ligase n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3G8N3_PHYRM) HSP 1 Score: 219 bits (558), Expect = 3.750e-63 Identity = 128/231 (55.41%), Postives = 156/231 (67.53%), Query Frame = 1
Query: 460 APARFRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKD-APGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLL---PDAGGGEGNGHAGAGGGPPMTAAGTVDYSK 1140
AP FRR R+RV+ELL +G L GQ VKGW +T R A GA FL ++DGSC VQ V++K+ GF AA + GGVGAS SV G VV S KGQ+VE+KA +V V G + PD ++TYP++KK H+LE LR+ AHLRPR+ +H AAMRVR+AMAFATH+FFN RGFLYIHTPI+T +DCEGAGE F V+TLL PD G P+T VDYSK
Sbjct: 13 APTLFRRNRIRVKELLQSGLELEGQTVTVKGWAKTLREAGAGAFAFLELNDGSCFAGVQCVINKEETEGFAAAIASGGVGASFSVEGVVVKSPAKGQEVELKAAKVMVYGGI--PD----SATYPMSKKRHTLEHLRAHAHLRPRSNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPIITESDCEGAGEMFGVTTLLSQHPD-------------GKLPLTKENKVDYSK 224
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: T0QBP1_SAPDV (Asparagine--tRNA ligase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QBP1_SAPDV) HSP 1 Score: 219 bits (557), Expect = 7.760e-63 Identity = 115/193 (59.59%), Postives = 142/193 (73.58%), Query Frame = 1
Query: 472 FRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKDAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLL 1050
F+R+RVRV+ELLA G + VG VKGW +T R A GA FL ++DGSC +Q+VV+KD PGF+A + GG GAS V+GTVV S KGQ +E+KA EV + G V +P STY L+KK H+LE LR AHLRPR+ +HSAAMRVR+AMA ATH FFN+RGFLYIHTP++T +DCEGAGE FAV+TL
Sbjct: 33 FKRRRVRVKELLAAGLSTVGHTVTVKGWAKTLREAGAGAFAFLELNDGSCFTGLQIVVAKDVPGFEALINSGGTGASFCVVGTVVESPAKGQLIEVKATEVTLYGDVADP------STYALSKKRHTLEHLREHAHLRPRSNIHSAAMRVRNAMAQATHSFFNERGFLYIHTPLITASDCEGAGEMFAVTTLF 219
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Match: A0A485KAR3_9STRA (Asparagine--tRNA ligase n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485KAR3_9STRA) HSP 1 Score: 216 bits (550), Expect = 8.280e-62 Identity = 122/224 (54.46%), Postives = 153/224 (68.30%), Query Frame = 1
Query: 472 FRRKRVRVRELLANGPALVGQKAVVKGWLRTARSASKGALLFLVVDDGSCSETVQVVVSKDAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGGEGNGHAGAGGGPPMTAAG-TVDYSK 1140
F+R+RVRV+ELL G +LVGQ +KGW +T R A GA FL ++DGSC VQVVV+KD PGF+ + GG GAS +++G VV S KGQ +EIKA V V G V +P +TY L+KK H+LE LR AHLR R+ +HSAAMRVR+AMA ATH FFN+RGFLYIHTP++T +DCEGAGE FAV+TL N H G P TA G ++D++K
Sbjct: 33 FKRRRVRVKELLGAGLSLVGQSVTIKGWAKTLREAGAGAFCFLEINDGSCFTGVQVVVNKDIPGFEDVINSGGTGASFAIVGDVVESPAKGQLIEIKATHVTVYGGVADP------ATYALSKKRHTLEHLRENAHLRARSNIHSAAMRVRNAMAHATHTFFNERGFLYIHTPLITASDCEGAGEMFAVTTLF--------NKHGD--GNLPKTADGKSIDFTK 240 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12737.2282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12737.2282.1 >prot_H-canaliculatus_F_contig12737.2282.1 ID=prot_H-canaliculatus_F_contig12737.2282.1|Name=mRNA_H-canaliculatus_F_contig12737.2282.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=388bp STFLSGERTTIADVALACASSRILEGGGGGAGALGARDLAGVPHVLRWYRback to top mRNA from alignment at H-canaliculatus_F_contig12737:262..3474- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12737.2282.1 ID=mRNA_H-canaliculatus_F_contig12737.2282.1|Name=mRNA_H-canaliculatus_F_contig12737.2282.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3213bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12737:262..3474- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12737:262..3474- >mRNA_H-canaliculatus_F_contig12737.2282.1 ID=mRNA_H-canaliculatus_F_contig12737.2282.1|Name=mRNA_H-canaliculatus_F_contig12737.2282.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2328bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12737:262..3474- (Hapterophycus canaliculatus Oshoro5f female)back to top |