|
|
Homology
BLAST of mRNA_H-canaliculatus_F_contig1273.2272.1 vs. uniprot
Match: D8LR55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR55_ECTSI) HSP 1 Score: 478 bits (1231), Expect = 3.430e-152 Identity = 427/895 (47.71%), Postives = 487/895 (54.41%), Query Frame = 1
Query: 253 MANMLAGEIPLCDGSHGGSKDPPSPSTPSLRTS---------GAGVVISRRTSPTGDSDFDYSDDDDGIAILKDDLRTTTERFFDRLPRQAGQDEWANAEGNAKRRASALVLTGHNS---GDGXXXXXXXXAFRRQYSWKSLEQLEKGVGGMMRRHTGTASTTLQSLDGGGSYSSIGSGGFGSGAGGDLCCAPGVGNDPFVGGGLEKSTPATRRLERPSAGGRPPDRRSSSPXXXXXXXXXXXXXRDPSASVNDLKARSEEAARTLEALRMLLAKEGLQGAEEGGDGNLRHLDRRSGSKHWPPSGGERTAEAFPSSVRARGGGXXXXXXXXXXXXXXESSKRMELLAQALDTLEQINAQLDSEVPQPSRKVTNGRDHHHXXXXXXX----SRSSLGTSGARQLPGRHSFGL--PLGSASATPRQ-----------------LNRQPRSSSDLLRHRRSEEGQAEPMSCGVPRHRVQVSKGGDNNVVYFELAITQARSTWTLERRMSEFVELRKSLVATAADLAAARRERQASTAKLLHSAPRPPAGGGGD-----------GRVKNGRSERSLRDAKREHRREAEARVPPLPEERKSWFDSAGIWSVMYARKREENLTERQVQLASWLANVLADRELVSPELVRFLGGDSGGVQALPVVEDVVSADGXXXXXXXXXXXXXXXXXLLGAERAYSWSGSXXXXXXXXXXXXXXXXXXXXXLMSDELDSLRGSLCAPDEWDVSKRGSKGSIDFVGSRSPCRGRGSSSGXXSGRSFSPHRRLEKAMGKRLAARARREAVVEGRAAGWGVDEGEQVSRVPISSGTSGELLSGGETAVEDEDEEAQG----------VQSSDLKNAFLASADASRRPRATSPSPSSPTRRVMLDAFFQPPT 2769
MANMLA E PL D G+ PS S+P + GAGVVI+RRT+ GDSDFD SDDDD IA+LKDDLRTTTERFFDRLPRQ + A RRASA+V TG + G R Q SW L +LEKGVGG++RR GT ST L+S +GG A G P A+ GGR R P RDP SV DLK RS+EAARTLEAL++L+ +E L +GG G + H K WP G+ AE S XXXXXXXXXXXXX +K MELLA+A+D L+QINA+L T GRD H XXXXXXX + S+ S QL GR + G P + A+ R L RQPRSSSDLLR RRSE GQAEPMSCGVPRHRVQ+ GGDNNVVYFELAITQARSTWTLER+M EFVELR+SLVATA DLAA G+ R++ DA+R+HRR+AEARVPPLPE KSWFDS GIWSVMYAR+REE LTE +V LASWLA +LADRELVSP+LV FLGGDSGG+QA PVVEDV+S L GAE WS XXXXXXXXXXXXXXXXXXXX L SDEL+SLRGSLCAPDEWDV+K S GS XX S SP RLEKAM RL V+ R+ G G G ++SG GE+ + G EDE +Q L + A + R+PRA PSPSSPTRRV LDAFFQPPT
Sbjct: 1 MANMLAWETPLAD--ENGNSSQPSWSSPRASEAEXXXXXXXXGAGVVIARRTNLAGDSDFDLSDDDDAIALLKDDLRTTTERFFDRLPRQ---------QQKAGRRASAIVPTGGDGVRRNSGSSTVSGVGGLRHQQSWNVLTELEKGVGGLIRRPAGTTSTGLRSPEGGXXXXXXXXXXX------XXFTADGSATLPXXXXXXXXXXSASPNGPSSPRGGRDVLPRQRRPP------------RDPKTSVKDLKVRSDEAARTLEALKVLILQERLPA--DGGKGEVSHGHGGRNGKLWPVDAGQIAAE---DSXXXXXXXXXXXXXXXXXXXXGLGAKHMELLAKAMDDLQQINAELXXXXXXXXXXXTGGRDPHXXXXXXXXXXXXASSAASVSWRLQLHGRRTSGQRPPKRLSQASGRSXXXXXXXXXXXXAGVGPLARQPRSSSDLLRQRRSEVGQAEPMSCGVPRHRVQLGNGGDNNVVYFELAITQARSTWTLERKMLEFVELRESLVATATDLAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSSKKSDSRTVADARRDHRRKAEARVPPLPESPKSWFDS-GIWSVMYARRREEKLTELKVHLASWLATILADRELVSPDLVSFLGGDSGGMQAHPVVEDVLSG----------------CDSLTGAEWTDPWSDXXXXXXXXXXXXXXXXXXXXXDLGSDELNSLRGSLCAPDEWDVTKSRS-GSXXXXXXXXXXXXX-----XXXXXSVSPRDRLEKAMVTRL--------FVQARSGGAGAARGVTSFSGIVASGQGGEVAAYG---CEDEXXXXXXXXXXXXXXXXIQDPGLTSTLSAPMETPRQPRA--PSPSSPTRRVTLDAFFQPPT 825
BLAST of mRNA_H-canaliculatus_F_contig1273.2272.1 vs. uniprot
Match: A0A6H5KNZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ4_9PHAE) HSP 1 Score: 426 bits (1096), Expect = 9.000e-132 Identity = 408/943 (43.27%), Postives = 483/943 (51.22%), Query Frame = 1
Query: 253 MANMLAGEIPLCDGSHGGSKDPPSPSTPS---------LRTSGAGVVISRRTSPTGDSDFDYSDDDDGIAILKDDLRTTTERFFDRLPRQAGQDEWANAEGNAKRRASALVLTGHNSG-----------------------------------------DGXXXXXXXXAFRRQYSWKSLEQLEKGVGGMMRRHTGTASTTLQSLDGGGSYSSIGSGGFGSGAGGDLCCAPGVGNDPFVG-GGLEKSTPATRRLERPSAGGRPPDRRSSSPXXXXXXXXXXXXXRDPSASVNDLKARSEEAARTLEALRMLLAKEGLQGAEEGGDGNLRHLDRRSGSKHWPPSGGERTAEAFPSSVRARGGGXXXXXXXXXXXXXXESSKRMELLAQALDTLEQINAQLDSEVPQPSRKVTNGRDHHHXXXXXXXSRSSLGTSGARQLP--GRHSFGL--PLGSASATPRQ---------------LNRQPRSSSDLLRHRRSEEGQAEPMSCGVPRHRVQVSKGGDNNVVYFELAITQARSTWTLERRMSEFVELRKSLVATAADLAAARRERQASTAKLLHSAPRPPAGGGGDGRVKNG-------------RSERSLRDAKREHRREAEARVPPLPEERKSWFDSAGIWSVMYARKREENLTERQVQLASWLANVLADRELVSPELVRFLGGDSGGVQALPVVEDVVSADGXXXXXXXXXXXXXXXXXLLGAERAYSWSGSXXXXXXXXXXXXXXXXXXXXX----------LMSDELDSLRGSLCAPDEWDVSKR--GSKGSIDFVGSRSPCRGRGSSSGXXSGRSFSPHRRLEKAMGKRLAARAR--REAVVEGRAAGWGVDEGEQVSRVPISSGTSGELLSGGETAVEDEDEEAQG-------VQSSDLKNAFLASADASRRPRATSPSPSSPTRRVMLDAFFQPPT 2769
MANMLA E PL D S G+K S S+P S AGVVI+R T+ GDSDFD SDDDD IA+LKDDLRT F DRLP RRASA+V TG + G G R Q SW L +LEKGVGG++RR GT S L+S +GG F GG +P SA P+ SS RDP SV D KARS+EAARTLEAL++L+ +E L + G+ + +H R K WP G+ +A S XXXXXXXXXXXXXX ++K ++LLA+A+D L+QIN +L++E+ R+ T GRD HH XXXXXX S +++L R +FG P + A+ R L RQ RSSSDLLRHRRSE GQAEPMSCGVPRHRVQ+ GGDNNVVYFELAITQARSTWTLER+MSEFVELR+SLVATA DLAA R+L DA+R+HRR+AEARVPPLP KSWFDS GIWSVMYAR+REE LTE +V LASWLA +LADRELVSP+LV FLGGDSGG++A PVVEDV+S L GAER WS S XXXXXXXXXXXXXXXXX L SDEL+SLRGSLCAPDEWDV+K GS G + SS S RLEKAM RL+ +AR G + +G+ ++SG GE+ + G EDE +Q L + A + R+PRA+ SPSSPTRRV LDAFF+PPT
Sbjct: 1 MANMLAWETPLADES--GNKSLLSWSSPGPSEAEAAEPAGASSAGVVIARMTNLAGDSDFDLSDDDDAIALLKDDLRTXXXXFXDRLPXXXXXXS---------RRASAIVATGASPGGASASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRNSGSSTVGGVGGLRHQQSWNVLTELEKGVGGLIRRPAGTTSVGLRSPEGGXXXX-------------XXXXXXXXXXXXFTADGGATLPSPDXXXXXVGSAS---PNGPSSPRRGRYVLPRQRRPPRDPKTSVKDFKARSDEAARTLEALKVLILQERLPADDGKGEVSNQHGGRDG--KLWPVDAGQGSAA---DSXXXXXXXXXXXXXXXXXXXXXLAAKHIKLLAKAMDDLQQINTELNAELRASRRRTTGGRDPHHRXXXXXXXXXXXXXSISQRLQPHDRRAFGQRSPKRLSQASGRSAAXXXXXXXXXAVGPLVRQARSSSDLLRHRRSEVGQAEPMSCGVPRHRVQLGNGGDNNVVYFELAITQARSTWTLERKMSEFVELRESLVATATDLAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDGRTLEDARRDHRRKAEARVPPLPVSPKSWFDS-GIWSVMYARRREEKLTELKVHLASWLATILADRELVSPDLVSFLGGDSGGMRAHPVVEDVLS----------------DCDSLTGAERTDPWSDSGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSDELNSLRGSLCAPDEWDVTKSRSGSGGDLGPXXXXXXXXXXXSS--------VSSRDRLEKAMVTRLSVQARSGEAGAARGITSFFGI----------VASGQGGEVAAYG---CEDEXXXXXXXXXXXXXIQDPGLTSTISAPMETPRQPRAS--SPSSPTRRVTLDAFFRPPT 871
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Phox homologous domain |
| Ec32 ortholog | Ec-06_004290.1 |
| Exons | 2 |
| Model size | 2772 |
| Cds size | 2772 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928993.9965467-CDS-H-canaliculatus_F_contig1273:5001..7542 | 1622928993.9965467-CDS-H-canaliculatus_F_contig1273:5001..7542 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1273 5002..7542 - |
| 1696845642.3723726-CDS-H-canaliculatus_F_contig1273:5001..7542 | 1696845642.3723726-CDS-H-canaliculatus_F_contig1273:5001..7542 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1273 5002..7542 - |
| 1622928994.016754-CDS-H-canaliculatus_F_contig1273:11489..11720 | 1622928994.016754-CDS-H-canaliculatus_F_contig1273:11489..11720 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1273 11490..11720 - |
| 1696845642.3849146-CDS-H-canaliculatus_F_contig1273:11489..11720 | 1696845642.3849146-CDS-H-canaliculatus_F_contig1273:11489..11720 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1273 11490..11720 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1273.2272.1 >prot_H-canaliculatus_F_contig1273.2272.1 ID=prot_H-canaliculatus_F_contig1273.2272.1|Name=mRNA_H-canaliculatus_F_contig1273.2272.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=924bp
VFRTIKSSAAFTREAQSRTGYVAGRSASMAAEMAGAGGLLSAPPPPTFRA
PTRDSVLVARRPSSTIDEQDLSFMDSEIKRLHRDMANMLAGEIPLCDGSH
GGSKDPPSPSTPSLRTSGAGVVISRRTSPTGDSDFDYSDDDDGIAILKDD
LRTTTERFFDRLPRQAGQDEWANAEGNAKRRASALVLTGHNSGDGGDGGG
GGGAFRRQYSWKSLEQLEKGVGGMMRRHTGTASTTLQSLDGGGSYSSIGS
GGFGSGAGGDLCCAPGVGNDPFVGGGLEKSTPATRRLERPSAGGRPPDRR
SSSPPSSGEEAPRRRSPRDPSASVNDLKARSEEAARTLEALRMLLAKEGL
QGAEEGGDGNLRHLDRRSGSKHWPPSGGERTAEAFPSSVRARGGGIGVGG
RGSSSSGSGESSKRMELLAQALDTLEQINAQLDSEVPQPSRKVTNGRDHH
HRHRHHRRSRSSLGTSGARQLPGRHSFGLPLGSASATPRQLNRQPRSSSD
LLRHRRSEEGQAEPMSCGVPRHRVQVSKGGDNNVVYFELAITQARSTWTL
ERRMSEFVELRKSLVATAADLAAARRERQASTAKLLHSAPRPPAGGGGDG
RVKNGRSERSLRDAKREHRREAEARVPPLPEERKSWFDSAGIWSVMYARK
REENLTERQVQLASWLANVLADRELVSPELVRFLGGDSGGVQALPVVEDV
VSADGGGGGGGDDDDDDDDDESLLGAERAYSWSGSGEEEEEDDDFEGDDD
DDDDDDLMSDELDSLRGSLCAPDEWDVSKRGSKGSIDFVGSRSPCRGRGS
SSGSGSGRSFSPHRRLEKAMGKRLAARARREAVVEGRAAGWGVDEGEQVS
RVPISSGTSGELLSGGETAVEDEDEEAQGVQSSDLKNAFLASADASRRPR
ATSPSPSSPTRRVMLDAFFQPPT* back to topmRNA from alignment at H-canaliculatus_F_contig1273:5002..11720- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1273.2272.1 ID=mRNA_H-canaliculatus_F_contig1273.2272.1|Name=mRNA_H-canaliculatus_F_contig1273.2272.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6719bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1273:5002..11720- (Hapterophycus canaliculatus Oshoro5f female)
GTTTTTCGGACCATTAAGAGTTCTGCCGCATTTACAAGGGAGGCGCAGAG
CAGGACTGGGTACGTCGCCGGTCGCAGTGCATCTATGGCAGCGGAGATGG
CGGGGGCTGGGGGCTTGCTATCGGCTCCACCGCCTCCAACCTTCCGAGCA
CCTACGAGGGACAGTGTTCTCGTGGCCCGCCGTCCCTCTTCCACAATCGA
TGAACAAGATTTGTCCTTCATGGACAGCGAGGTCAGTTGAACAAGGAGTC
GAGTGTCGTGGTCTTGAATCGTACTGAGAGTTGGTCGTGAGAGGGCGGCA
CTTTGCTGCAGAAACATGTGGAGTTCCCTCTGCCCAGACCGCCCTTGCCT
TTCGCCGCCGATCTGCGCGTGTTTCATGTGAAGGAGACGAGAAAAACGTT
GAACTTTTCAACCTCTCTCGTGTCGGACCTCGTGTGGCGTTGTTTCCATC
ATCCAAATACGTAAACGTTATGGAATGGAACGGCACTCTCTCTTTCTGTG
CATCTCTTTTCGGGCGTGATCGTTTTGCACGCTCTTCGCCGTCGCGCGAG
GGTGATCCTACGTAGCTCGATGACATCACTGCGTTCCGATCGAGCGGACC
GATGGGCTCTCTTCCACCTGCGGAGTGCAACACGCCACCAGCTGCTTCTG
TAACCTTCACGGAATTCGTGAACGCAGGCAAGCCCAGCAACTAATTTCTT
CCGGACTCACACCGGTACAAGTACACGACAGGATTCAGCGCGGTGTGGGT
GTGGTTGTGGGCCCTACATGTTTGCCGCCAAACCCCACTTCTGTTACGCT
CTTCGTCTCTCGTTGTTCTCACTCGCAACCCCTTCCGCTACTGCTGTGCA
ACAGTAGTGCAGAGGACGGAAGACGCAAACCGCCTTCAAATTCAAGTATA
CGTCTCTTACGTGTGTGTCAAATGTTTCGGTTTCACCCGGTGGGTCTTTT
GAACCCGCAAGTCTAAGTTCTGGTGTAGGAAGGGAGGTCACAGCTGCAAT
ATCCTGTCGTCATCCTGCATCCTCATTGGAGACTGTCGCATCGAGGCTGT
GACATGCTTTCGTTGCTCTCCTTTCCCGTTGGTCTCCGAGTAAGGCGGCT
TGAGGTCTTGCGCGTAACTTCTTCCGTCGAAAAAATACCCGCAGCAGCAG
CCGGCAGGGGGTGGAGGTTGAAGCCCTGTGTCTCAGCTCTTCGCACGAGT
GAACCAGTCAGGGTGTCCCTCAATCGGCGTGTGTCGCCTTCGCAAACACG
CACACAGCTTTCGTCGCTTGGTGACAACCTTCGTCTTTCATTAATCCCAT
CAAAATGAAGACAGCGTCTTGCGCGGTTAGGCATCATTTACAGCAGTGTT
GAGCACAAAAAGTGTACTACACGCACTATTCTGGGTTGATCGGGAGAACA
CTCGGGGGCTAGAGATAAACCATCTTCATTCAACGCTGGCTCTTTCCTCG
AGCAATCGATTGGAGAAAACGGTCTCGGAGGCTACCGGTACTCAACGCCA
GCCGACCCATCCTTCTACCAGTACTATGTTTTACGATAAAACCCAAAGCA
ATTCCGGAGATGGGATTTGTTTCATTTAAGTAGGACAAGTGCGACAGCAG
TGAAAGATGGTTGATTTCAGTTTAGTTTGCAAACTTGTGTGGGGCTGCCG
CAGCAGCCCGCACTCCGTTGTGTACTCTTTTGACAGCAGAGTACAAATTA
TTGGAGCGTTCCAACGGGTCAACGACGCCACAAACGTCCTACGGGGCAAG
AGGGCACACGGATTCAAATTCTGGACCCTATGCGACCAAACTGGGCGAAG
TCCGAAATCAGGCCAGTGGGGGGAGGGGGGGAGGGGTACCAGACTCCAAA
TATATAGGATATTGTACAGGCCATACAAATGTCTTTATATCAACGAAATA
TGAAGGTTTTCGAGTACTCAGTACTGCTGTCGGTGTGACCCCCTTTGTTC
TCCTGCAAGTCTTGTACTGCGTGCCGACCCTAAGCCCACCACTGAAACGA
CAGACGTGGCGATGCTTTAAGTAGCGCGGCATACTACGTAACACTGCTCC
CACGTAGACTAATCGTGGCTTCAACCCCGTTATCTCGGCAAGTGATGGAG
TACCAACGGCAGCACAGGTGGTGTTATTGTATTCCTTCGGTGTGTTGTTG
ACTTGTTTGGGAAATTAGTGCACACCACAGGATCGACGCCCTCCTTTCTA
ATTCGAATAGTTATTTGTCATGATTTATATATTTATTTCCGCTGCTTCAG
TGGCGTCGATAATGTAACGGCTGCTGTCTCCGAATAAAATACACAACGGA
TATCGCAGTTGGTGTCGCAACCACAAAGAAGAGTAGAGGTGCGCAGCGCG
TGATTTTTATGTAGTTTGGTATATAAATATTTACTACGGCAGATAGATAG
ATAGATAGATAGATAGATATAGATGTTGAACAGCCGAAGAGCGTTCTCTA
CACTCATTTTTAAAAGCCAAGATCACGCAAATAAATGTACAGCAAGGATG
ATGCGTCTCCCTTCCACGGGCACGCCACAACCTTTAAGCTACCATCAAAT
AGCAGGGAAGTCGGTTACGCGGTACGTGTAATTACGCGTAACACATTCTA
GCCTACGTACTCATAATCGCGGCGTAATTCGACGTAACTCGAAGGGGCAC
CGCAGATTGGATTGTACTGACGCTTTTCAATTTTTGTGAAGAATACCATC
AAGCTAGCTCCAGTCCAACGCGTTCCCTTCACGCCTGTGCAGGATCGCGT
AAATATTCCTGGCTTCGAGTATTGTTTTTTGTTTTGTCGATACAAGAGCC
TTACCCCGACGAAAGGCTCTTCCGTGCCGAGTACAAATTGCAACGTGCAA
ACGTGCAAACTACAGATTTAAGATTATGATGCTGAAATTGAACGCGGGGT
CTTCTGCACTTCAGTTTTTGGTTGTCGAAGCATCAAGCGTCAAACACCGG
GGATGAATCTTAAGAGCAATTTCGCGCAGGTCCGAAGCTCTCCTGATCCG
TATTTGAGCTGTTGAAACGAATTTGACTATCAGTACGACGGTGGAAACCC
GGGGATTAGATAAGTCCATCCCCCGATGTTGTTTGCCGTAAGAAAGTCGC
GTAACTAGGTCGAAATGCCGATTACACGTAACTACGTGTACGTCATTTTT
TCGATTTGCCGTAACCGACTTCCCTTTCAAATAGTAGTATTCAAATCAGA
AGCACTCAGTGCGGACGTGTGACATCGAGCAGGGATGTGCTCTATACTTA
CTTTAATTTCGGATATCACAAATGAATCGGTCCTCCTCAGACACATGCAT
GCTGACGTCCAACGATGACTCATCGTGTAATTCACTCCTCTGTTACGGAG
GCGCTCACGTATGGAGGAGGGGGCTGCTCAACCTCTAACGTCGAGAGGAT
GATGGGCCACACAAACCGATTCAGAGCAGCCTGTACAAACGCGGGAGGGC
GTGTTTTATCCTAATTTTAGCATGGGCAACACTAATTTCAGTATAGATGA
CCAAAGTGGCCTAAGGTGCTTACCAAACTGGCCTAAGAACGAAAAATCCC
AGGCCGGGGGGGGGGGTGCATAGGGTCCAAAGTTTGAATCCGTGTGCCCT
CTTGTACAGGGGCCCTAGGTGCTTCGTGTATCAGGTAGGCAGGGGAAATC
TAGGCGGCGGCTTCCCTTCGTTTTGCCTGTTTGACTAGTCATCTGATTTT
AGATAAGGGAACGTTCAGCCCTTGGATGGAGATTGGAGATGTGTACTTGT
ATACACAGGTGTGTGGAGAACGCCCCGCCCGGTTGCTCTGAGCGATACCC
GACGTACCACTATTCGATGTGCCCAATGCTCTCCTACGGTTGTAATAGAC
CCACTTCCGTATCAGAGGCGGTCACTCCATCCGTGCCAAAACGCGAGAAT
CGCAGTGATCAGTCTCCTTCACCTTCGTAGCCTTGAAATTGTCGGGGCTT
GTCGCTGTCGTGTGTAGAACCGAGCTCACGCACGATTCCCCTCCAACTAC
GAACCCCCGCCCATTCCAACCTACGTACTACGTACCCATACCCTCTAGCT
CACCGCCCTCTGTTCCTCTTACTTTCGTGAATATTCGTTCAACGAGCGAT
CGCATGCAACGTTTTTCTCTGTTTCGCGTTGCCCCCTCGTTCTAACAAGC
TGTTTCTGCCCCTGCCCCCTGGTACCAGATTAAGCGTCTCCATCGCGACA
TGGCCAACATGCTCGCCGGGGAGATCCCGCTCTGCGATGGCAGCCACGGC
GGCAGCAAGGACCCGCCCTCGCCGTCCACGCCTTCGCTGCGAACGAGCGG
CGCGGGAGTGGTTATCTCGCGGAGGACGAGTCCCACCGGCGACAGCGACT
TCGACTATTCGGACGACGACGATGGGATCGCGATTCTCAAGGACGATCTC
CGGACCACGACGGAACGGTTCTTCGATCGCCTCCCCCGGCAGGCGGGGCA
GGACGAGTGGGCGAATGCGGAGGGGAATGCGAAGCGCAGGGCTTCCGCGC
TAGTGCTGACCGGTCACAACAGCGGCGATGGCGGTGACGGTGGAGGGGGG
GGGGGGGCGTTCCGCCGGCAGTACTCGTGGAAGTCCCTGGAGCAGCTGGA
GAAGGGCGTAGGGGGCATGATGCGACGGCATACTGGGACGGCCTCGACGA
CGCTGCAGTCTCTCGATGGCGGCGGCAGCTACTCCAGCATTGGCAGCGGA
GGCTTCGGAAGCGGCGCCGGCGGCGATCTTTGTTGTGCTCCCGGGGTGGG
GAACGATCCTTTTGTGGGTGGTGGATTGGAGAAATCCACCCCTGCAACAC
GAAGGTTGGAAAGGCCTAGCGCCGGTGGTCGCCCTCCCGATCGTCGTTCG
AGTTCTCCGCCGAGCAGCGGCGAGGAGGCGCCGCGGCGACGATCTCCCCG
CGATCCCAGCGCATCTGTGAACGACCTCAAGGCTCGGTCCGAGGAAGCGG
CTAGGACGTTGGAAGCGTTGAGGATGTTGCTCGCGAAAGAGGGGCTACAA
GGCGCAGAGGAAGGTGGCGACGGTAATCTGCGACATCTAGACCGGCGCTC
CGGTAGCAAGCATTGGCCTCCGAGTGGGGGGGAAAGAACCGCGGAAGCTT
TTCCCTCCTCTGTCCGGGCAAGAGGAGGCGGTATCGGTGTCGGAGGCCGC
GGCAGCAGCAGCAGCGGCAGCGGTGAATCTTCGAAGCGCATGGAGCTGCT
GGCGCAGGCTTTGGACACCCTGGAGCAAATTAACGCTCAGCTCGACAGCG
AGGTGCCGCAGCCGAGCAGGAAGGTCACCAACGGCCGCGACCATCACCAC
CGTCACCGCCACCACCGAAGATCCCGCTCTTCCTTGGGGACGTCGGGGGC
ACGCCAGCTGCCTGGCCGACATTCGTTCGGCCTTCCGCTGGGCTCGGCGT
CGGCGACGCCGCGACAGCTCAACCGGCAGCCGCGATCCTCATCGGACCTG
CTTCGGCACCGGCGGTCGGAGGAGGGCCAGGCGGAGCCCATGTCGTGCGG
CGTCCCGCGGCACCGTGTGCAGGTGAGCAAGGGGGGTGACAACAACGTCG
TCTACTTCGAGCTGGCGATCACCCAGGCGAGATCCACGTGGACGCTGGAG
CGCCGGATGTCGGAGTTCGTCGAGCTGCGGAAGTCGCTGGTCGCCACCGC
CGCAGACCTCGCGGCGGCGAGGCGGGAGAGACAGGCATCAACGGCTAAGC
TGCTTCACTCCGCTCCTAGGCCTCCCGCGGGCGGCGGTGGTGACGGCCGT
GTCAAGAATGGCAGGAGCGAGAGGAGCCTGAGAGACGCGAAGCGCGAGCA
CCGCCGGGAGGCGGAGGCGAGAGTGCCGCCGCTCCCGGAAGAGCGCAAGA
GCTGGTTCGACTCCGCGGGCATCTGGTCCGTGATGTACGCCCGCAAGCGG
GAGGAGAACCTGACCGAGCGGCAGGTGCAGCTTGCCTCGTGGCTGGCGAA
CGTGTTGGCCGACCGCGAGCTTGTCTCGCCGGAGCTCGTGCGCTTCCTGG
GCGGGGACAGCGGAGGCGTGCAGGCCCTGCCTGTTGTCGAGGACGTCGTG
TCTGCCGATGGCGGCGGCGGCGGCGGCGGCGACGACGATGACGACGACGA
CGACGACGAAAGCCTTCTCGGTGCCGAGCGTGCTTATTCTTGGTCGGGCT
CTGGCGAGGAGGAGGAGGAAGACGACGATTTTGAAGGCGACGACGACGAC
GACGACGACGACGACCTTATGAGTGACGAGTTGGACAGTCTTCGTGGGTC
TCTCTGCGCACCGGATGAGTGGGATGTTTCGAAGAGGGGAAGCAAGGGTA
GCATTGACTTCGTCGGCTCCAGGAGCCCCTGCCGCGGCCGTGGCAGTAGC
AGCGGCAGCGGCAGCGGCAGGAGTTTCAGCCCGCATCGTCGGCTGGAGAA
GGCCATGGGCAAGCGGCTCGCTGCCCGTGCCAGAAGGGAGGCGGTGGTCG
AGGGCAGGGCTGCGGGCTGGGGTGTGGATGAGGGCGAGCAGGTATCTAGG
GTCCCCATCTCTTCCGGAACAAGTGGAGAGCTTTTGTCAGGAGGGGAAAC
GGCGGTAGAGGATGAAGATGAGGAGGCACAGGGGGTGCAGAGCTCGGACT
TGAAGAACGCGTTCTTGGCGTCTGCCGACGCCTCCCGGCGACCGAGGGCG
ACATCGCCCTCGCCCTCTTCCCCCACCCGACGCGTAATGCTTGACGCTTT
TTTCCAACCGCCGACCTAA back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1273:5002..11720- >mRNA_H-canaliculatus_F_contig1273.2272.1 ID=mRNA_H-canaliculatus_F_contig1273.2272.1|Name=mRNA_H-canaliculatus_F_contig1273.2272.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5544bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1273:5002..11720- (Hapterophycus canaliculatus Oshoro5f female)
GTTTTTCGGACCATTAAGAGTTCTGCCGCATTTACAAGGGAGGCGCAGAG
CAGGACTGGGTACGTCGCCGGTCGCAGTGCATCTATGGCAGCGGAGATGG
CGGGGGCTGGGGGCTTGCTATCGGCTCCACCGCCTCCAACCTTCCGAGCA
CCTACGAGGGACAGTGTTCTCGTGGCCCGCCGTCCCTCTTCCACAATCGA
TGAACAAGATTTGTCCTTCATGGACAGCGAGGTTTTTCGGACCATTAAGA
GTTCTGCCGCATTTACAAGGGAGGCGCAGAGCAGGACTGGGTACGTCGCC
GGTCGCAGTGCATCTATGGCAGCGGAGATGGCGGGGGCTGGGGGCTTGCT
ATCGGCTCCACCGCCTCCAACCTTCCGAGCACCTACGAGGGACAGTGTTC
TCGTGGCCCGCCGTCCCTCTTCCACAATCGATGAACAAGATTTGTCCTTC
ATGGACAGCGAGATTAAGCGTCTCCATCGCGACATGGCCAACATGCTCGC
CGGGGAGATCCCGCTCTGCGATGGCAGCCACGGCGGCAGCAAGGACCCGC
CCTCGCCGTCCACGCCTTCGCTGCGAACGAGCGGCGCGGGAGTGGTTATC
TCGCGGAGGACGAGTCCCACCGGCGACAGCGACTTCGACTATTCGGACGA
CGACGATGGGATCGCGATTCTCAAGGACGATCTCCGGACCACGACGGAAC
GGTTCTTCGATCGCCTCCCCCGGCAGGCGGGGCAGGACGAGTGGGCGAAT
GCGGAGGGGAATGCGAAGCGCAGGGCTTCCGCGCTAGTGCTGACCGGTCA
CAACAGCGGCGATGGCGGTGACGGTGGAGGGGGGGGGGGGGCGTTCCGCC
GGCAGTACTCGTGGAAGTCCCTGGAGCAGCTGGAGAAGGGCGTAGGGGGC
ATGATGCGACGGCATACTGGGACGGCCTCGACGACGCTGCAGTCTCTCGA
TGGCGGCGGCAGCTACTCCAGCATTGGCAGCGGAGGCTTCGGAAGCGGCG
CCGGCGGCGATCTTTGTTGTGCTCCCGGGGTGGGGAACGATCCTTTTGTG
GGTGGTGGATTGGAGAAATCCACCCCTGCAACACGAAGGTTGGAAAGGCC
TAGCGCCGGTGGTCGCCCTCCCGATCGTCGTTCGAGTTCTCCGCCGAGCA
GCGGCGAGGAGGCGCCGCGGCGACGATCTCCCCGCGATCCCAGCGCATCT
GTGAACGACCTCAAGGCTCGGTCCGAGGAAGCGGCTAGGACGTTGGAAGC
GTTGAGGATGTTGCTCGCGAAAGAGGGGCTACAAGGCGCAGAGGAAGGTG
GCGACGGTAATCTGCGACATCTAGACCGGCGCTCCGGTAGCAAGCATTGG
CCTCCGAGTGGGGGGGAAAGAACCGCGGAAGCTTTTCCCTCCTCTGTCCG
GGCAAGAGGAGGCGGTATCGGTGTCGGAGGCCGCGGCAGCAGCAGCAGCG
GCAGCGGTGAATCTTCGAAGCGCATGGAGCTGCTGGCGCAGGCTTTGGAC
ACCCTGGAGCAAATTAACGCTCAGCTCGACAGCGAGGTGCCGCAGCCGAG
CAGGAAGGTCACCAACGGCCGCGACCATCACCACCGTCACCGCCACCACC
GAAGATCCCGCTCTTCCTTGGGGACGTCGGGGGCACGCCAGCTGCCTGGC
CGACATTCGTTCGGCCTTCCGCTGGGCTCGGCGTCGGCGACGCCGCGACA
GCTCAACCGGCAGCCGCGATCCTCATCGGACCTGCTTCGGCACCGGCGGT
CGGAGGAGGGCCAGGCGGAGCCCATGTCGTGCGGCGTCCCGCGGCACCGT
GTGCAGGTGAGCAAGGGGGGTGACAACAACGTCGTCTACTTCGAGCTGGC
GATCACCCAGGCGAGATCCACGTGGACGCTGGAGCGCCGGATGTCGGAGT
TCGTCGAGCTGCGGAAGTCGCTGGTCGCCACCGCCGCAGACCTCGCGGCG
GCGAGGCGGGAGAGACAGGCATCAACGGCTAAGCTGCTTCACTCCGCTCC
TAGGCCTCCCGCGGGCGGCGGTGGTGACGGCCGTGTCAAGAATGGCAGGA
GCGAGAGGAGCCTGAGAGACGCGAAGCGCGAGCACCGCCGGGAGGCGGAG
GCGAGAGTGCCGCCGCTCCCGGAAGAGCGCAAGAGCTGGTTCGACTCCGC
GGGCATCTGGTCCGTGATGTACGCCCGCAAGCGGGAGGAGAACCTGACCG
AGCGGCAGGTGCAGCTTGCCTCGTGGCTGGCGAACGTGTTGGCCGACCGC
GAGCTTGTCTCGCCGGAGCTCGTGCGCTTCCTGGGCGGGGACAGCGGAGG
CGTGCAGGCCCTGCCTGTTGTCGAGGACGTCGTGTCTGCCGATGGCGGCG
GCGGCGGCGGCGGCGACGACGATGACGACGACGACGACGACGAAAGCCTT
CTCGGTGCCGAGCGTGCTTATTCTTGGTCGGGCTCTGGCGAGGAGGAGGA
GGAAGACGACGATTTTGAAGGCGACGACGACGACGACGACGACGACGACC
TTATGAGTGACGAGTTGGACAGTCTTCGTGGGTCTCTCTGCGCACCGGAT
GAGTGGGATGTTTCGAAGAGGGGAAGCAAGGGTAGCATTGACTTCGTCGG
CTCCAGGAGCCCCTGCCGCGGCCGTGGCAGTAGCAGCGGCAGCGGCAGCG
GCAGGAGTTTCAGCCCGCATCGTCGGCTGGAGAAGGCCATGGGCAAGCGG
CTCGCTGCCCGTGCCAGAAGGGAGGCGGTGGTCGAGGGCAGGGCTGCGGG
CTGGGGTGTGGATGAGGGCGAGCAGGTATCTAGGGTCCCCATCTCTTCCG
GAACAAGTGGAGAGCTTTTGTCAGGAGGGGAAACGGCGGTAGAGGATGAA
GATGAGGAGGCACAGGGGGTGCAGAGCTCGGACTTGAAGAACGCGTTCTT
GGCGTCTGCCGACGCCTCCCGGCGACCGAGGGCGACATCGCCCTCGCCCT
CTTCCCCCACCCGACGCGTAATGCTTGACGCTTTTTTCCAACCGCCGACC
TAAATTAAGCGTCTCCATCGCGACATGGCCAACATGCTCGCCGGGGAGAT
CCCGCTCTGCGATGGCAGCCACGGCGGCAGCAAGGACCCGCCCTCGCCGT
CCACGCCTTCGCTGCGAACGAGCGGCGCGGGAGTGGTTATCTCGCGGAGG
ACGAGTCCCACCGGCGACAGCGACTTCGACTATTCGGACGACGACGATGG
GATCGCGATTCTCAAGGACGATCTCCGGACCACGACGGAACGGTTCTTCG
ATCGCCTCCCCCGGCAGGCGGGGCAGGACGAGTGGGCGAATGCGGAGGGG
AATGCGAAGCGCAGGGCTTCCGCGCTAGTGCTGACCGGTCACAACAGCGG
CGATGGCGGTGACGGTGGAGGGGGGGGGGGGGCGTTCCGCCGGCAGTACT
CGTGGAAGTCCCTGGAGCAGCTGGAGAAGGGCGTAGGGGGCATGATGCGA
CGGCATACTGGGACGGCCTCGACGACGCTGCAGTCTCTCGATGGCGGCGG
CAGCTACTCCAGCATTGGCAGCGGAGGCTTCGGAAGCGGCGCCGGCGGCG
ATCTTTGTTGTGCTCCCGGGGTGGGGAACGATCCTTTTGTGGGTGGTGGA
TTGGAGAAATCCACCCCTGCAACACGAAGGTTGGAAAGGCCTAGCGCCGG
TGGTCGCCCTCCCGATCGTCGTTCGAGTTCTCCGCCGAGCAGCGGCGAGG
AGGCGCCGCGGCGACGATCTCCCCGCGATCCCAGCGCATCTGTGAACGAC
CTCAAGGCTCGGTCCGAGGAAGCGGCTAGGACGTTGGAAGCGTTGAGGAT
GTTGCTCGCGAAAGAGGGGCTACAAGGCGCAGAGGAAGGTGGCGACGGTA
ATCTGCGACATCTAGACCGGCGCTCCGGTAGCAAGCATTGGCCTCCGAGT
GGGGGGGAAAGAACCGCGGAAGCTTTTCCCTCCTCTGTCCGGGCAAGAGG
AGGCGGTATCGGTGTCGGAGGCCGCGGCAGCAGCAGCAGCGGCAGCGGTG
AATCTTCGAAGCGCATGGAGCTGCTGGCGCAGGCTTTGGACACCCTGGAG
CAAATTAACGCTCAGCTCGACAGCGAGGTGCCGCAGCCGAGCAGGAAGGT
CACCAACGGCCGCGACCATCACCACCGTCACCGCCACCACCGAAGATCCC
GCTCTTCCTTGGGGACGTCGGGGGCACGCCAGCTGCCTGGCCGACATTCG
TTCGGCCTTCCGCTGGGCTCGGCGTCGGCGACGCCGCGACAGCTCAACCG
GCAGCCGCGATCCTCATCGGACCTGCTTCGGCACCGGCGGTCGGAGGAGG
GCCAGGCGGAGCCCATGTCGTGCGGCGTCCCGCGGCACCGTGTGCAGGTG
AGCAAGGGGGGTGACAACAACGTCGTCTACTTCGAGCTGGCGATCACCCA
GGCGAGATCCACGTGGACGCTGGAGCGCCGGATGTCGGAGTTCGTCGAGC
TGCGGAAGTCGCTGGTCGCCACCGCCGCAGACCTCGCGGCGGCGAGGCGG
GAGAGACAGGCATCAACGGCTAAGCTGCTTCACTCCGCTCCTAGGCCTCC
CGCGGGCGGCGGTGGTGACGGCCGTGTCAAGAATGGCAGGAGCGAGAGGA
GCCTGAGAGACGCGAAGCGCGAGCACCGCCGGGAGGCGGAGGCGAGAGTG
CCGCCGCTCCCGGAAGAGCGCAAGAGCTGGTTCGACTCCGCGGGCATCTG
GTCCGTGATGTACGCCCGCAAGCGGGAGGAGAACCTGACCGAGCGGCAGG
TGCAGCTTGCCTCGTGGCTGGCGAACGTGTTGGCCGACCGCGAGCTTGTC
TCGCCGGAGCTCGTGCGCTTCCTGGGCGGGGACAGCGGAGGCGTGCAGGC
CCTGCCTGTTGTCGAGGACGTCGTGTCTGCCGATGGCGGCGGCGGCGGCG
GCGGCGACGACGATGACGACGACGACGACGACGAAAGCCTTCTCGGTGCC
GAGCGTGCTTATTCTTGGTCGGGCTCTGGCGAGGAGGAGGAGGAAGACGA
CGATTTTGAAGGCGACGACGACGACGACGACGACGACGACCTTATGAGTG
ACGAGTTGGACAGTCTTCGTGGGTCTCTCTGCGCACCGGATGAGTGGGAT
GTTTCGAAGAGGGGAAGCAAGGGTAGCATTGACTTCGTCGGCTCCAGGAG
CCCCTGCCGCGGCCGTGGCAGTAGCAGCGGCAGCGGCAGCGGCAGGAGTT
TCAGCCCGCATCGTCGGCTGGAGAAGGCCATGGGCAAGCGGCTCGCTGCC
CGTGCCAGAAGGGAGGCGGTGGTCGAGGGCAGGGCTGCGGGCTGGGGTGT
GGATGAGGGCGAGCAGGTATCTAGGGTCCCCATCTCTTCCGGAACAAGTG
GAGAGCTTTTGTCAGGAGGGGAAACGGCGGTAGAGGATGAAGATGAGGAG
GCACAGGGGGTGCAGAGCTCGGACTTGAAGAACGCGTTCTTGGCGTCTGC
CGACGCCTCCCGGCGACCGAGGGCGACATCGCCCTCGCCCTCTTCCCCCA
CCCGACGCGTAATGCTTGACGCTTTTTTCCAACCGCCGACCTAA back to top
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