mRNA_H-canaliculatus_F_contig12722.2271.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12722.2271.1
Unique NamemRNA_H-canaliculatus_F_contig12722.2271.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: D8LU31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU31_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.760e-116
Identity = 206/274 (75.18%), Postives = 228/274 (83.21%), Query Frame = 1
Query:    1 LVILERALPRAAEKTVRLLEPGSALLARWLPVFFVPSLVVLPLSPIPTSLNALKLLLVVCGGWFLSLTSTAAVVTALSPSARPGDAVDAPVTAPSKPAPPPVFRGSVVRGLGVCAAVAGLLAVAG-AGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            LV+LERA P++AE  V  LEPG+ALLARWLPVFF PSLVVLPLSP P+S+NALKLLL+VCGGWF+SL+STAAVV ALSP   P DA      AP K   P VFRG  VRGLG  A V+G+LAVAG +G +PG        A+L KLSKPAAQLSLLLATLFGFSAGTR+PRRVSKAVHPVV C+AV M  AAAIGKGVGL F D+LRSYLTRSRCPVHLGAGD+LLGLLGPSVLSFAVQMYRRR+LIF++AKQVA GS+FCASSGLFGTALVSR
Sbjct:  139 LVVLERAAPKSAEDIVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGALSP---PADASTTDSAAPPKTLAP-VFRGPFVRGLGAGAVVSGVLAVAGGSGQAPG--------ALLTKLSKPAAQLSLLLATLFGFSAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLRSYLTRSRCPVHLGAGDVLLGLLGPSVLSFAVQMYRRRNLIFEDAKQVAAGSVFCASSGLFGTALVSR 400          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A7S1FQA4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQA4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.030e-37
Identity = 112/265 (42.26%), Postives = 145/265 (54.72%), Query Frame = 1
Query:   28 RAAEKTVRLLEPGSALLARWLPVFFVPSLVVLPLS-PIPTSLNALKLLLVVCGGWFLSLTSTAAVVTALSPSARPGDAVDAPVTAPSKPAPPPVFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            R   K  RLL+PG+ LLARWLP+FFVPSLV LPL+ P+  +L A K+ +VV GG+  SL +T+  V A+ P  +             K A PP             A + GLL    A    G AA      V A L  PA  + LL  TL  F  G R+P +++KA+HP+V C  ++    AA+GK  G SF   L  Y T S      G GDLLL LLGP+V+S A+QMY RR L+ +NA++VA G    A+ GLFGTA + R
Sbjct:  144 RWGNKVYRLLDPGAVLLARWLPIFFVPSLVTLPLAEPLGGALEAAKVGIVVAGGFLFSLLTTSWCVAAVRPKGQ-------------KTASPPSKSAGXXXXXPFSAGLLGLLVRLTA---LGGAADLLAGVVNAGLRAPARYVYLLCGTLASFVYGARLPPKITKALHPLVVCTLLSWTGVAALGKLTGSSFRATLAGYRTGSWTT---GPGDLLLFLLGPAVISLALQMYGRRELVRQNAREVAAGVTGSAAGGLFGTAFLVR 389          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A7S3VAA5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAA5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.700e-35
Identity = 104/265 (39.25%), Postives = 141/265 (53.21%), Query Frame = 1
Query:   52 LLEPGSALLARWLPVFFVPSLVVLPLSP-IPTSLNALKLLLVVCGGWFLSLTSTAAVVTA----LSPSARPGDAVDAPV---TAPSKPAPPPV-FRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            LL PG+A+LA+WLPVFFVPSLV LPL+  + +SL   K+  VV  G+F +L STA  V      L  ++   DA   PV   T   +  PPP  F  +    L  CA  + +  +    +S               L  P   L++L  TL  F+ G R+P+  +K VHP+VTC  +T  A        G SF  +L SY   S CPVHLGAGDLLL +LGP+V++ A QMY R+ L+ +N  +V       +  GLFGTA ++R
Sbjct:  153 LLSPGAAVLAKWLPVFFVPSLVTLPLAQSLGSSLEVFKVGAVVVAGFFFTLFSTAFSVIGIRKILGTASSSADAQSLPVVQSTNVEESTPPPKPFSDATFNRLVACATTSAIATIVAIKSS-----------ASIHLITPMTALTMLCTTLASFTFGARLPKSFTKTVHPLVTCTTLTWTAMKVFALSTGQSFRSMLTSYKVGSTCPVHLGAGDLLLFMLGPAVVALACQMYDRKKLMKENIAEVGTAVGVSSIGGLFGTAAMAR 406          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A7S0BG00_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BG00_9RHOD)

HSP 1 Score: 137 bits (345), Expect = 1.260e-33
Identity = 97/273 (35.53%), Postives = 147/273 (53.85%), Query Frame = 1
Query:    1 LVILERALPRAAEKTVRLLEPGSALLARWLPVFFVPSLVVLPLSPIPTSLNALKLLLVVCGGWFLSLTSTAAVVTALSPSARPGDAVDAPVTAPSKPAPPPVFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            L+ L+   P  + K     +PG   LA+WL V F PSLVVLPL+P+P S + L+ + V+  GW +SL S A V  AL   +   +  +  V  P+ P   P +R  + + LG   A   LL++A +G +P  AA +                  L ATL GF  G  + + V K +HP++TC    + A   + +  G++   +L  Y+TR+   + +G GDLLL LLGP+V+SFA QMY R+ ++ + + +V G S F +  GLFGTA ++R
Sbjct:  133 LLALDVVRPEVSTKVAGAYQPGVNFLAKWLAVCFAPSLVVLPLAPMPASADLLRTVCVLFLGWAISLLSAAYVAIALQKLSVSEEEEE--VLTPAAPIVMPPYR-KLAKILGASTAGTFLLSIASSGFTPFVAAYT------------------LSATLLGFCLGNLLNKDVKKIIHPLITCTLTALCAIFVLAQASGVATAGLLAGYITRAHNILKVGGGDLLLSLLGPAVVSFAFQMYSRKKIMKQRSLEVIGASFFASIFGLFGTAFLAR 384          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A7S2PQH5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQH5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.990e-32
Identity = 96/270 (35.56%), Postives = 147/270 (54.44%), Query Frame = 1
Query:   55 LEPGSALLARWLPVFFVPSLVVLPLS-PIPTSLNALKLLLVVCGGWFLSLTSTAAVVTALS-----------PSARPGDAVDAPVTAPSKPAPPPVFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSY---LTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            L PG+ LLA+WLPVFFVPSL+ LPL+  +  SL  LKL  V+ GG+F +L +TA  V  +                  +AV APV A + P PP  F  ++++ L   A ++G+ AV             A+     +L  P     LL +TL  F  G  +P+  +K VHP++TC+++T  A+  +    G +F D+++ Y   ++    P+  GAGD+LL LLGP+V++ A QMY R+ L+ +N K+V   ++  +  GL+GTA   R
Sbjct:  144 LNPGAGLLAKWLPVFFVPSLITLPLAGSLGNSLEILKLFTVIIGGFFFTLFTTAWSVLGIRRLMGGXXXXXXXXVSATEAV-APVKATTNP-PPKAFSTTLLKNLATLAGISGIAAV------------GAIKQSATQLITPLQSSFLLFSTLASFVFGANLPKSFTKTVHPLITCSSLTWVASTLMASLTGRTFIDIIKLYKAGISPLAAPLSTGAGDVLLFLLGPAVVALACQMYGRKKLMRENIKEVGISTIVSSLGGLYGTAAAVR 399          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A1E7FHY6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHY6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.040e-31
Identity = 105/268 (39.18%), Postives = 144/268 (53.73%), Query Frame = 1
Query:   49 RLLEPGSALLARWLPVFFVPSLVVLPL----SPIPTSLNALKLLLVVCGGWFLSLTSTAAVVTALSP--SARPGDAVDAPVTAPSKPAPPP-VFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVH----LGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            R+L PG+ALLA+WLPVFFVPSLV LPL      +  S   LK L VV GG+F +L +TA  V  +         D V A    P  P P    F   +++ L + A ++GL A+ GA  SP  A  S    +L KL  P   L L   TL GF  G+R+ +++ K +HP++TC+A+T A      K  G +FF +L +Y  +     H     GAGD+LL  LGP+V+S ++ MY +R LI  N  Q+       +  GLFGTA + R
Sbjct:  178 RILSPGAALLAKWLPVFFVPSLVTLPLVGGLESLGGSTEILKTLAVVVGGFFFTLLTTAGAVIGVGKLMGKEKDDMVVATTAMPDVPVPVTRPFSDELMKKLRIVAILSGLAALEGA--SPVFA--SGPAKLLIKLKTPILSLLLGSTTLSGFVYGSRLSKQIKKIIHPLITCSALTWAVMVVFAKCTGRTFFSLLSTY--KMGKGFHGLSGTGAGDILLFALGPAVMSLSISMYDKRDLIRDNFLQIISAVSVSSIGGLFGTAWMVR 439          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: B8CB30_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB30_THAPS)

HSP 1 Score: 130 bits (328), Expect = 3.700e-31
Identity = 101/276 (36.59%), Postives = 145/276 (52.54%), Query Frame = 1
Query:   28 RAAEKTVRLLEPGSALLARWLPVFFVPSLVVLPL-SPIPTSLNALKLLLVVCGGWFLSLTSTAAVV----------TALSP-SARPGDAVDAPVTAPSKPAPPPVFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            +   +  +LL PG+ LLA+WLPVFFVPSL+ LPL S +  +   LK+L VV GG+F +L +T+  V          TA  P    P DA + PVT       P  F  ++ R L   A + G+ +V     SP             + +KP     LL  TL  F  G  +P+R +K VHP+VTCA +T  A+       G +F  +L+SY   +  P+  GAGD+LL LLGP+V++ + QMY R+ L+ +N  +V   +L  +  GL+GTA   R
Sbjct:  141 KMGNEVYQLLNPGAMLLAKWLPVFFVPSLITLPLASGLGNAWEVLKVLSVVIGGFFFTLFTTSWSVLGIRKLMGGDTATEPVPIYPVDASNVPVTNKQ----PQAFSLTLFRTLKAFAWLTGISSVTLINKSPAS-----------QWNKPLQSAFLLSITLSSFVFGANLPKRFTKTVHPLVTCAGLTWLASKTFAMLTGSTFLAILQSYKAGTLAPLSAGAGDVLLFLLGPAVVALSCQMYGRKKLMRENIPEVGISTLVSSLGGLYGTAAAVR 401          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A7S1TNE3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE3_9RHOD)

HSP 1 Score: 129 bits (323), Expect = 1.590e-30
Identity = 98/272 (36.03%), Postives = 141/272 (51.84%), Query Frame = 1
Query:   25 PRAAEKTVRLLEPGSALLARWLPVFFVPSLVVLPLS--PIPTSLNALKLLLVVCGGWFLSLTSTAA---VVTALSPSARPG--DAVDAPVTAPSKPAPPPVFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            P AA+K     +PG A L++WL VFFVP L+VLPL+  P P + + L+++ V+   + LSLT +AA   ++  ++ SA     D     V AP   + PP  R +++  L             G+G            A+ A   +          TLFGF  G R+P    +AVHP++T     + A  A  +  G+ F DVL  YLT+ RC   LG GDLL+ +LG ++LSFA Q+Y RR LI ++A +V G +   +   LFGTAL SR
Sbjct:  117 PDAADKLAAFFQPGVAFLSKWLAVFFVPVLIVLPLTARPYPPARDLLRIVSVIFSTFVLSLTGSAAFSQLIRRVTRSAESAAIDTTSNAVRAPKPTSAPPPRRSTMLFWL---------FGALGSGCG----------ALCAPHVQQFRAALTTCTTLFGFCLGQRMPAAFKRAVHPLLTTIGTVLTAMFAFAQMSGIRFLDVLAEYLTKGRCGSCLGGGDLLMNVLGAAILSFAFQIYARRRLIREHAMEVFGTTTTASILSLFGTALASR 369          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A4D9CWJ8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWJ8_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.310e-30
Identity = 104/272 (38.24%), Postives = 158/272 (58.09%), Query Frame = 1
Query:   49 RLLEPGSALLARWLPVFFVPSLVVLPLSP--IPTSLNALKLLLVVCGGWFLSLTSTAAVVTALSPSARPGDAVDAPVTAP-------SKPAPPPVFRGSVVRGLGVCAAVAGLLAV------AGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            R+L+PG+ LL RWL VFFVP+LV+LPLS   +  SL AL+L  V+  G+  SL +TA +   L+  ++   AV +P           S    P  F  S+ + L +  AV+G  +V      A +G+S           +L  L++    L   LAT+  +  G+R+P ++ KAVHP+++CA +T+A  +   + +G S    L +Y++R+ CP+HLG GDLLLGLLGPS+L+ AVQMY RR+L+ +N  ++ G  L  +  GLF +A +SR
Sbjct:  599 RVLKPGTDLLTRWLAVFFVPTLVLLPLSAGSLAPSL-ALRLGAVLVLGFEASLWTTAELADLLT--SKNDVAVSSPXXXXXXXXXXFSTTKTP--FSHSLHKALAISTAVSGAASVLLSARLAASGSS-----------LLPSLAR---TLFTFLATILSYVTGSRLPLKLRKAVHPLLSCAGLTLALLSLHARLLGQSLTHQLHAYVSRAPCPLHLGGGDLLLGLLGPSILAMAVQMYERRALLKQNLSKILGTCLGASVFGLFSSAALSR 851          
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Match: A0A1Z5JZL6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZL6_FISSO)

HSP 1 Score: 127 bits (320), Expect = 3.670e-30
Identity = 98/279 (35.13%), Postives = 143/279 (51.25%), Query Frame = 1
Query:   25 PRAAEKTVRLLEPGSALLARWLPVFFVPSLVVLPLSP-IPTSLNALKLLLVVCGGWFLSLTSTAAVVTALSPSARPGDAVDAPV-------------TAPSKPAPPPVFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAAQLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLSFFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNAKQVAGGSLFCASSGLFGTALVSR 819
            P+A+      L PG+ALLA+WLPVFFVPSL+ LPL+  I TS   +K++ +V GG+F +L S A  V A+  +      V A +             T P KP     F    +  +G+     GLL +A   A             +  L++ ++ L LL  TL  F  G R+P++++  +HP++ C + T   A A+    G SF  +L+SY T S      GAGD+LL LLGP+V+S A+ MY +R L+  N  +V          GL+GTAL+ R
Sbjct:  111 PKASSFLYEKLTPGAALLAKWLPVFFVPSLITLPLADSIGTSAELIKVVGIVIGGFFFTLLSAAFSVIAVRKAMGNESPVKAEIEDLTSKATQNVMNTVPLKPFSDECFHALTLTSVGL-----GLLTLASKFAG------------ITVLARQSSALFLLATTLSTFVYGARLPKKLTTIIHPLLVCTSFTWVVARALAAATGQSFRSILKSYRTGSLGLKTSGAGDILLFLLGPAVISLAISMYEKRKLMRDNLAEVGTAVGVSTFGGLYGTALLVR 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12722.2271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU31_ECTSI1.760e-11675.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1FQA4_9STRA1.030e-3742.26Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3VAA5_9STRA1.700e-3539.25Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0BG00_9RHOD1.260e-3335.53Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2PQH5_9STRA1.990e-3235.56Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1E7FHY6_9STRA2.040e-3139.18Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
B8CB30_THAPS3.700e-3136.59Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1TNE3_9RHOD1.590e-3036.03Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A4D9CWJ8_9STRA2.310e-3038.24Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1Z5JZL6_FISSO3.670e-3035.13Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12722contigH-canaliculatus_F_contig12722:353..3100 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.4
Seed ortholog evalue4.9e-95
Seed eggNOG ortholog2880.D8LU31
GOsGO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006996,GO:0008028,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008643,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009657,GO:0009658,GO:0009706,GO:0009853,GO:0009941,GO:0009987,GO:0015075,GO:0015144,GO:0015238,GO:0015318,GO:0015665,GO:0015711,GO:0015718,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0016043,GO:0019866,GO:0022857,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0034219,GO:0034220,GO:0042170,GO:0042221,GO:0042493,GO:0042873,GO:0042879,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043879,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071840,GO:0097339,GO:0098656,GO:1900866,GO:1901618,GO:1901974,GO:1901975,GO:1903825,GO:1905039
EggNOG free text desc.LrgB-like family
EggNOG OGs2QQ63@2759,COG1346@1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons4
Model size822
Cds size822
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12722.2271.1prot_H-canaliculatus_F_contig12722.2271.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12722 353..3100 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928993.7691288-CDS-H-canaliculatus_F_contig12722:352..4351622928993.7691288-CDS-H-canaliculatus_F_contig12722:352..435Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 353..435 +
1696845642.28827-CDS-H-canaliculatus_F_contig12722:352..4351696845642.28827-CDS-H-canaliculatus_F_contig12722:352..435Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 353..435 +
1622928993.781971-CDS-H-canaliculatus_F_contig12722:829..13841622928993.781971-CDS-H-canaliculatus_F_contig12722:829..1384Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 830..1384 +
1696845642.300425-CDS-H-canaliculatus_F_contig12722:829..13841696845642.300425-CDS-H-canaliculatus_F_contig12722:829..1384Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 830..1384 +
1622928993.7948792-CDS-H-canaliculatus_F_contig12722:2106..21901622928993.7948792-CDS-H-canaliculatus_F_contig12722:2106..2190Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 2107..2190 +
1696845642.3113642-CDS-H-canaliculatus_F_contig12722:2106..21901696845642.3113642-CDS-H-canaliculatus_F_contig12722:2106..2190Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 2107..2190 +
1622928993.8222697-CDS-H-canaliculatus_F_contig12722:3000..31001622928993.8222697-CDS-H-canaliculatus_F_contig12722:3000..3100Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 3001..3100 +
1696845642.3223748-CDS-H-canaliculatus_F_contig12722:3000..31001696845642.3223748-CDS-H-canaliculatus_F_contig12722:3000..3100Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12722 3001..3100 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12722.2271.1

>prot_H-canaliculatus_F_contig12722.2271.1 ID=prot_H-canaliculatus_F_contig12722.2271.1|Name=mRNA_H-canaliculatus_F_contig12722.2271.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=274bp
LVILERALPRAAEKTVRLLEPGSALLARWLPVFFVPSLVVLPLSPIPTSL
NALKLLLVVCGGWFLSLTSTAAVVTALSPSARPGDAVDAPVTAPSKPAPP
PVFRGSVVRGLGVCAAVAGLLAVAGAGASPGQAAPSAVPAVLAKLSKPAA
QLSLLLATLFGFSAGTRVPRRVSKAVHPVVTCAAVTMAAAAAIGKGVGLS
FFDVLRSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSLIFKNA
KQVAGGSLFCASSGLFGTALVSR*
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mRNA from alignment at H-canaliculatus_F_contig12722:353..3100+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12722.2271.1 ID=mRNA_H-canaliculatus_F_contig12722.2271.1|Name=mRNA_H-canaliculatus_F_contig12722.2271.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2748bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12722:353..3100+ (Hapterophycus canaliculatus Oshoro5f female)
CTGGTTATCCTGGAACGGGCTTTGCCCCGGGCGGCGGAAAAGACCGTCAG GTTGCTGGAGCCAGGGTCGGCTCTGCTAGCAAGGTAAATGCTTCGGTTGT GCCTTCACATGCCGCAATCGATACCCATACAGCAGCCCAACATACGCACG TATCGTACGGCAGGCGGGGTACGGCTGCATCGTCTCGTTTAGTCTCAGTA TCGCTGGGTCGTGACCTCGCCACAACCCGCCTCTCCAACCAAGACATCTA TCTGTGTACACGTGAAGACTAATACAATGTGGTTTCATCGCGCTCCGCCC CTTGCGCAAGCGACTTCGTCGCCCGATTCATTCATGGTGATCAGCGGTGA CACTTTGATAGCGCTCACGACCTCTCCCGTGTCCTCATTGGTCTCTGCCT GCAACATCCGCGCTTCGTGTACATGCCCCGATGATGCACTCACACATTTG TAAACATGCACCATGTTTTCCATATAGGTGGCTTCCCGTGTTCTTCGTCC CCAGCTTGGTGGTCCTCCCTCTGTCCCCGATCCCCACGTCTTTGAACGCC CTCAAGCTCCTCCTGGTGGTCTGTGGTGGCTGGTTCCTCAGCTTGACCTC CACCGCCGCCGTAGTCACGGCCTTGTCCCCAAGCGCCCGTCCGGGCGATG CGGTCGACGCACCCGTCACCGCACCCTCCAAGCCCGCACCGCCCCCGGTT TTCCGTGGGTCAGTCGTCCGGGGGCTCGGCGTGTGTGCGGCCGTGGCAGG ATTGCTGGCGGTGGCGGGGGCAGGCGCATCGCCCGGGCAGGCGGCGCCGA GCGCGGTGCCTGCCGTGCTGGCGAAGCTCTCCAAGCCCGCCGCGCAGCTT TCGCTGCTGCTTGCCACCCTGTTCGGATTTTCGGCGGGCACGCGCGTGCC CCGCCGGGTTTCTAAGGCGGTGCATCCGGTGGTCACGTGCGCTGCGGTCA CGATGGCGGCCGCTGCAGCGATCGGGAAGGGCGTGGGGCTCAGCTTTTTC GACGTGCTGAGAAGCTACCTCACAAGGTCTAGGTAAGCTTGTGTGCCTGT GCGCGTTCGTCCGCATGGTGTGTTGTCTGCCGTGAGGGCGGGTAGAGAGA GAGAGGGAAACTAGCGCGATGCACGACGTGCTGTGGGCTTGAGGAGTTTT GTGCCTCTATTCGATGCGAGCGTTCTCTCTAAACTCCGAAGTATTTATTT GGCGTGCGATTGAGAAAGGCCGGTCGCTGGTTCGGCTTCACCACTCAGTC GTCAAATCATAGATGTTATCCTTTCTTCAGCGCCTCTTTTTCAGCGCCTC CGTAACAAAGGAGAACCTCCCTGCGCCTCAATAAGTAATACGTCGTATAG TAGGTAAGCCAGGCCAGAAAACAAGAAATTAGCACGAAGCACAAGTAGGT CGCAGCAGAGCGGACTCCTTCTAAACCTCTCTCCTCACCGCTCTTGAACT TGCACGAGACCCCTCTCCACGTCTCGAAAGCCACCAATTGTTGTCTGCTT CGCCTGTTTGCTAGAACGTTCTTTTGCGTTTTACCTCGTGCCCATTTGTG GATGTGCTGCCCGTTGTATCTGGTGCTTCAGGGTCTTGGTGCGTGCTGCT CGTGCCCGTTGTCACCTGCCTCCTCCGTGCCTGTTTTTGTATTTTAGCGC CATTCCGTTCCCGGTGGCGCCGACTGCGTTGTTGACACTTCGCACACGAC TCGTAACTTGTTTTTGTTTTGCTACGCGACGCTCGTGTTCACCTGGCAAA CCAGGTGTCCTGTTCACCTCGGGGCCGGCGACCTTCTACTGGGGCTGTTG GGTCCGTCGGTGTTGTCATTTGCCGTGCAGATGTACAGGTGAGTCGTGAG GCGTGAGTCGCATAGTACGGGGTGTTGAAACGTTCACCTGCAGATGCCCG AACGGTTCGGTCGCTCTCTGAGCGGGCGAAGCTTTACTCGGCATGCCCAG GTGCCTCGCTTCCCAAATTTCACAGATTTTAGAGTAGGAGAAAGAAACCA TCGGTATGGCTGGATTCGTGATCTGCACAAGGGCAATGATGGTGAACCTT TCGGGAGGAGGTGGCGGAGGGGGAGTTATCCCTCTGAGAATCTCTTGCAA CTTGGACCTCTAGAAGACACACGTTTTTTGTCGCCTGCACGAAAAATATA GAGGTAGTGTCATAGGACGCACACCCACTCCTTCAAACTTGTTAAGCTTC GCACGCTGGCGGGAGCAAAAGACTCGAACCAAAGCATAGTTAAACCTTTC TGCTGGGCTTTCGAAGACCGACCATGTTTGGCTCGGCTGCTCTCGCCACA TGATAGCAGGCGAACTCGAGACGGACGGAATGAAACCGTCAGGTCACTTT CCGGCGGGAAAGGCAAACGTTCGACAGAAAGGGAAACTTCAGTACTAATA CACGGACAGTATCGTGTTTGATGCTGGCGCCTCCGCTGTTGAAAAACTCG ATGCACCTTGCGTGTTGAGCTCGAAAGGGTGGCAACGATCTCTGCTGTGT TGACTGGCCGCATCAAGCGTCACTCCAACGCGCCCATTCGCGGTGACACT GATGATACTCATGATGTTGATGACGATATTGATTATTTTGATGACGTCCC TCCTTTTCCCTCTTGCGTATGGGTCTCCATTCGACCCGACGTGCTCAGGC GAAGATCCTTGATTTTCAAGAACGCCAAACAGGTGGCCGGGGGTTCGCTA TTCTGTGCCTCATCGGGGCTGTTCGGGACGGCCCTCGTATCAAGGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12722:353..3100+

>mRNA_H-canaliculatus_F_contig12722.2271.1 ID=mRNA_H-canaliculatus_F_contig12722.2271.1|Name=mRNA_H-canaliculatus_F_contig12722.2271.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1644bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12722:353..3100+ (Hapterophycus canaliculatus Oshoro5f female)
CTGGTTATCCTGGAACGGGCTTTGCCCCGGGCGGCGGAAAAGACCGTCAG
GTTGCTGGAGCCAGGGTCGGCTCTGCTAGCAAGCTGGTTATCCTGGAACG
GGCTTTGCCCCGGGCGGCGGAAAAGACCGTCAGGTTGCTGGAGCCAGGGT
CGGCTCTGCTAGCAAGGTGGCTTCCCGTGTTCTTCGTCCCCAGCTTGGTG
GTCCTCCCTCTGTCCCCGATCCCCACGTCTTTGAACGCCCTCAAGCTCCT
CCTGGTGGTCTGTGGTGGCTGGTTCCTCAGCTTGACCTCCACCGCCGCCG
TAGTCACGGCCTTGTCCCCAAGCGCCCGTCCGGGCGATGCGGTCGACGCA
CCCGTCACCGCACCCTCCAAGCCCGCACCGCCCCCGGTTTTCCGTGGGTC
AGTCGTCCGGGGGCTCGGCGTGTGTGCGGCCGTGGCAGGATTGCTGGCGG
TGGCGGGGGCAGGCGCATCGCCCGGGCAGGCGGCGCCGAGCGCGGTGCCT
GCCGTGCTGGCGAAGCTCTCCAAGCCCGCCGCGCAGCTTTCGCTGCTGCT
TGCCACCCTGTTCGGATTTTCGGCGGGCACGCGCGTGCCCCGCCGGGTTT
CTAAGGCGGTGCATCCGGTGGTCACGTGCGCTGCGGTCACGATGGCGGCC
GCTGCAGCGATCGGGAAGGGCGTGGGGCTCAGCTTTTTCGACGTGCTGAG
AAGCTACCTCACAAGGTCTAGGTGGCTTCCCGTGTTCTTCGTCCCCAGCT
TGGTGGTCCTCCCTCTGTCCCCGATCCCCACGTCTTTGAACGCCCTCAAG
CTCCTCCTGGTGGTCTGTGGTGGCTGGTTCCTCAGCTTGACCTCCACCGC
CGCCGTAGTCACGGCCTTGTCCCCAAGCGCCCGTCCGGGCGATGCGGTCG
ACGCACCCGTCACCGCACCCTCCAAGCCCGCACCGCCCCCGGTTTTCCGT
GGGTCAGTCGTCCGGGGGCTCGGCGTGTGTGCGGCCGTGGCAGGATTGCT
GGCGGTGGCGGGGGCAGGCGCATCGCCCGGGCAGGCGGCGCCGAGCGCGG
TGCCTGCCGTGCTGGCGAAGCTCTCCAAGCCCGCCGCGCAGCTTTCGCTG
CTGCTTGCCACCCTGTTCGGATTTTCGGCGGGCACGCGCGTGCCCCGCCG
GGTTTCTAAGGCGGTGCATCCGGTGGTCACGTGCGCTGCGGTCACGATGG
CGGCCGCTGCAGCGATCGGGAAGGGCGTGGGGCTCAGCTTTTTCGACGTG
CTGAGAAGCTACCTCACAAGGTCTAGGTGTCCTGTTCACCTCGGGGCCGG
CGACCTTCTACTGGGGCTGTTGGGTCCGTCGGTGTTGTCATTTGCCGTGC
AGATGTACAGGTGTCCTGTTCACCTCGGGGCCGGCGACCTTCTACTGGGG
CTGTTGGGTCCGTCGGTGTTGTCATTTGCCGTGCAGATGTACAGGCGAAG
ATCCTTGATTTTCAAGAACGCCAAACAGGTGGCCGGGGGTTCGCTATTCT
GTGCCTCATCGGGGCTGTTCGGGACGGCCCTCGTATCAAGGTAAGCGAAG
ATCCTTGATTTTCAAGAACGCCAAACAGGTGGCCGGGGGTTCGCTATTCT
GTGCCTCATCGGGGCTGTTCGGGACGGCCCTCGTATCAAGGTAA
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