mRNA_H-canaliculatus_F_contig1269.2237.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1269.2237.1
Unique NamemRNA_H-canaliculatus_F_contig1269.2237.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: A0A6H5L664_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L664_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.300e-101
Identity = 252/485 (51.96%), Postives = 300/485 (61.86%), Query Frame = 1
Query:    1 LINHQLLVAKIFPRTQTEACGEKAAGGTVNSAPVGGEQEIIHCAASQGITSSALALLADRRVHPDIQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASAPARH-CRGPSGHAEWRTTALHYXXXXXXXXXXXXXXXXXFSRDQRDGAGLTPTEISARSSHASSPAVTYLLLDHGGGGQLVHNYVNMALEDVEIVRGLAQGGAFLNWQDHQHGRTPLHRAVHFRHFQILKILLKFGANPNLRDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAFNRVGVVRLLLRAPGSSTELRDLYLGITPLSWAARLGFTPMLCVLLEAGADVESRSPGGXXXXXXXXXXXXXXXXXXXXXXXXXLDVVDGTGADPGSVIGLGDPVGCTRPGGAPFMSAMAVNEGERRLDSAAANYIRSALEGAKKDRAWRRRGWLVVLARRRALGMA 1452
            +I HQ LV++IF  ++ E         ++NS P+G   EIIHCAASQG+T +  ALLA+RR   D +DRFG+T LHWAAGQGH++TV+AL+++GA +                                AP R+ C+G   HAE R+TALHY                 F   Q D  G+T  EISAR  H SS   T  LL    GG+LV++YVNM  +DV  V GLAQGGAFL+WQD+   R+PLHRAV+F HFQILKILL  GANPN+ D                     XXXXXXXXXXXXXXXXXXXXX     R+GV RLLL A  SS E+RD + GITPL+WA++L FT ML +LL  GADV SRSP  XXXXXXXXXXXXXXXXXXXXXXXXX D +D  GAD GSV GLGDP G T P   P +   A N+  R  + A A  I+ AL  A+KDR WRRRGWLVVLARR+A+ MA
Sbjct:   21 VIRHQRLVSQIFAPSEIEGFST-VTDKSMNSTPIGEAGEIIHCAASQGLTFAVQALLAERRTACDAKDRFGKTPLHWAAGQGHVDTVLALVNAGALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNRYNCQGRC-HAELRSTALHYAAEGGHVGVIIALLSAGFCNGQPDETGVTAAEISARVGHESSREATRRLLGGDRGGKLVYDYVNMVSQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNVADNHAVTPLHMVAVKGCEAEAAEXXXXXXXXXXXXXXXXXXXXXXXXXXRIGVTRLLLDASASSLEVRDSFHGITPLAWASKLSFTTMLRILLSMGADVNSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSVTGLGDPPGHTGPQSPPILPG-AANQTGRPKNGALATRIQLALSKARKDRTWRRRGWLVVLARRQAMTMA 502          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: A0A6H5L5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T2_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 8.360e-99
Identity = 244/485 (50.31%), Postives = 290/485 (59.79%), Query Frame = 1
Query:    1 LINHQLLVAKIFPRTQTEACGEKAAGGTVNSAPVGGEQEIIHCAASQGITSSALALLADRRVHPDIQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASAPARH-CRGPSGHAEWRTTALHYXXXXXXXXXXXXXXXXXFSRDQRDGAGLTPTEISARSSHASSPAVTYLLLDHGGGGQLVHNYVNMALEDVEIVRGLAQGGAFLNWQDHQHGRTPLHRAVHFRHFQILKILLKFGANPNLRDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAFNRVGVVRLLLRAPGSSTELRDLYLGITPLSWAARLGFTPMLCVLLEAGADVESRSPGGXXXXXXXXXXXXXXXXXXXXXXXXXLDVVDGTGADPGSVIGLGDPVGCTRPGGAPFMSAMAVNEGERRLDSAAANYIRSALEGAKKDRAWRRRGWLVVLARRRALGMA 1452
            +I HQ LVA+IFPR+ T+         ++NS P+G   EIIHCAASQG+T +  ALLA+RR   D +DRFG+T LHWAAGQGH++TV+AL+ +GA +                                AP R+ C+G   HAE R+TAL  XXXXXXXXXXXXXX   F   Q D  G+T  EISAR  H SS   T  LL    GG+LV++YVNM  +DV  V GLAQGGAFL+WQD+   R+PLHRAV+F HFQILKILL  GANPN+ D                                          AV +NR+GV RLLL A  SS E+RD + GITPL+WA++  F  ML +LL  GADV SRSP  XXXXXXXXXXXXXXXXXXXXXXXXX D +D  GAD GS IGLGDP     P   P +   AVN      +   A  I+ AL  A+KDR WRRRGWLVVLARR+A+ MA
Sbjct:   21 VIRHQRLVAQIFPRSVTDK--------SMNSTPIGEAGEIIHCAASQGLTFAVQALLAERRTACDAKDRFGKTPLHWAAGQGHVDTVLALVDAGALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNRYNCQGRC-HAELRSTALXXXXXXXXXXXXXXXXSAGFCNGQPDETGVTAAEISARVGHESSREATRRLLGGDRGGKLVYDYVNMVSQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNVADNHAVTPLHIYDTHARTDDSYTPLHL-----------------AVVYNRIGVTRLLLDASASSLEVRDSFHGITPLAWASKFSFATMLRILLSMGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSAIGLGDPPRHKGPQSPPILPG-AVNRTGWLKNETLATRIQLALSNARKDRTWRRRGWLVVLARRQAMAMA 478          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: D7G7M3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M3_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.250e-95
Identity = 277/486 (57.00%), Postives = 319/486 (65.64%), Query Frame = 1
Query:    1 LINHQLLVA-KIFPRTQTEACGEKAAGGTVNSAPVGGEQEIIHCAASQGITSSALALLADRRVHPDIQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASAPARH-CRGPSGHAEWRTTALHYXXXXXXXXXXXXXXXXXFSRDQRDGAGLTPTEISARSSHASSPAVTYLLLDHGGGGQLVHNYVNMALEDVEIVRGLAQGGAFLNWQDHQHGRTPLHRAVHFRHFQILKILLKFGANPNLRDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAFNRVGVVRLLLRAPGSSTELRDLYLGITPLSWAARLGFTPMLCVLLEAGADVESRSPGGXXXXXXXXXXXXXXXXXXXXXXXXXLDVVDGTGADPGSVIGLGDPVGCTRPGGAPFMSAMAVNEGERRLDSAAANYIRSALEGAKKDRAWRRRGWLVVLARRRALGMA 1452
            +I HQ LVA  + PR++ +         ++NS P+G   E+IHCAASQG+T +  ALLA+ R+  D +DRFG+T LHWAAGQGH++ V+ L+ +GA +                                AP RH C     HAE R+T    XXXXXXXXXXXXXXX  F + Q D   +T  EISAR  H SS   T  LL    GG+LV++YVNM  +DV  V GL QGGAFL+WQD    RTPLHRAV+F HFQILKILL  GANPN+ D     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +NR+GV RLLL A  SS E+RD Y GITPL+WA++L FT ML VLL  GADV SRSP  XXXXXXXXXXXXXXXXXXXXXXXXX D  D  GAD GS IGLGDP     P   P +   AVNE  R  +   A  IR AL  A+KDR WRRRGWLVVLARR+A+ MA
Sbjct:   21 VIRHQRLVALMMLPRSEIDGYST-VTDKSMNSTPIGEAGEMIHCAASQGLTFTVQALLAEGRIACDAKDRFGKTPLHWAAGQGHVDIVLVLMDAGALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNRHNCEEGRCHAELRSTXXXXXXXXXXXXXXXXXXXAGFCKGQHDETRVTAAEISARVGHESSREATRRLLGGDRGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADNLAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNRIGVTRLLLDASASSLEVRDSYHGITPLAWASKLSFTLMLRVLLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSADNEGADAGSAIGLGDPPRHAGPQSPPILLG-AVNEIGRLNNEELATRIRLALSKARKDRTWRRRGWLVVLARRQAMAMA 504          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: D7G7L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L7_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.770e-35
Identity = 80/182 (43.96%), Postives = 102/182 (56.04%), Query Frame = 1
Query:  271 LSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASAPARHCRGPSGHAEWRTTALHYXXXXXXXXXXXXXXXXXFSRDQRDGAGLTPTEISARSSHASSPAVTYLLLDHGGGGQLVHNYVNMALEDVEIVRGLAQGGAFLNWQDHQHGRTPLHRAVHFRHFQILKILLKFGANPNLRD 816
            + +GA + +R H  A+PLMLAA GGH+ +VR LL+ GA AP R+                                  F + Q D  G+T  EISAR  H SS   T  LL    GG+LV++YVNM  ++V  V GL +GGAFL+WQD    R+PLHRAV+F H QIL+ILL  GANPN+ D
Sbjct:    1 MDAGALVDSRDHFKAAPLMLAALGGHERVVRCLLYAGAGAPNRY---------------------------NSLLSAGFCKGQHDETGVTAAEISARVGHESSREATRRLLGGDRGGKLVYDYVNMVSQNVATVYGLVKGGAFLDWQDSHRRRSPLHRAVNFGHSQILQILLTTGANPNVAD 155          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: D7G7L8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L8_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.000e-14
Identity = 58/126 (46.03%), Postives = 64/126 (50.79%), Query Frame = 1
Query: 1072 MLCVLLEAGADVESRSPGGXXXXXXXXXXXXXXXXXXXXXXXXXLDVVDGTGADPGSVIGLGDPVGCTRPGGAPFMSAMAVNEGERRLDSAAANYIRSALEGAKKDRAWRRRGWLVVLARRRALGM 1449
            ML VLL AGADV SRS  G                          D +D  GAD GSV GLGDP   T     P +   AVNE  R  + A A  IR AL  A+KDR WRRRGWLVVLA R+A+ M
Sbjct:    1 MLRVLLNAGADVNSRSSAGSTPLYWACRLNTADIVECLLLAGADPDYLDNQGADAGSVTGLGDPPRHTGRQSPPILPG-AVNETGRLKNEALATRIRLALSKARKDRTWRRRGWLVVLATRQAMAM 125          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: Q9VL58_DROME (LP07441p n=19 Tax=melanogaster group TaxID=32346 RepID=Q9VL58_DROME)

HSP 1 Score: 67.4 bits (163), Expect = 4.660e-9
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  124 HCAASQG-ITSSALALLADRRVHPDIQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASA 390
            H  A QG IT   +A    R+ + D +D  G TALHWAA  G L +V  L+++GA+++  +    SPL+LAA+GGH+ IVR LL  GA +
Sbjct:   70 HERAGQGEITEEQVAAERARQQNIDYKDAHGFTALHWAASYGQLVSVQLLVAAGANVNTMAPDLISPLLLAAAGGHNEIVRFLLEHGADS 159          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: A0A6P4KDE5_DROBP (DNA-binding protein RFXANK n=3 Tax=ananassae subgroup TaxID=32347 RepID=A0A6P4KDE5_DROBP)

HSP 1 Score: 65.1 bits (157), Expect = 2.750e-8
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  124 HCAASQG-ITSSALALLADRRVHPDIQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASA 390
            H  A QG IT   +     R    D +D  G TALHWAA  G L +V  L+++GA+++  +    SPL+LAA+GGH+ IVR LL  GA +
Sbjct:   70 HERAGQGEITDEQVTAERGRHADIDFKDGHGFTALHWAASYGQLVSVQLLVAAGANVNFMAPDLVSPLLLAAAGGHNEIVRFLLDHGAES 159          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: UPI000A1D19FF (DNA-binding protein RFXANK n=1 Tax=Drosophila serrata TaxID=7274 RepID=UPI000A1D19FF)

HSP 1 Score: 63.5 bits (153), Expect = 9.400e-8
Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 1
Query:  124 HCAASQG-ITSSALALLADRRVHPDIQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASA 390
            H  A QG IT   +     R+   D +D  G TALHWAA  G L +V  L+++GA+++  +    SP++LAA+GGH+ IVR LL  GA +
Sbjct:   70 HERAGQGEITEEQVTAERARKQDIDHKDEHGFTALHWAASYGQLVSVQLLVAAGANVNIMAPDLVSPVLLAAAGGHNEIVRFLLDHGADS 159          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: A0A158QI75_RODNA (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A158QI75_RODNA)

HSP 1 Score: 61.2 bits (147), Expect = 6.120e-7
Identity = 39/126 (30.95%), Postives = 50/126 (39.68%), Query Frame = 1
Query:  196 IQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGASAPARHCRGPSGHAEWRTTALHYXXXXXXXXXXXXXXXXXFSRDQRDGAGLTPTEISARSSHA 573
            ++D  GRT LHWA   GH++ V  L+  G S         +PLM+AAS GH+NIV +LL  G S                   LHY                    D RD  G TP   +    H+
Sbjct:   31 LKDSSGRTILHWAVCGGHVDLVKRLIQGGCSPDEPDSSEWTPLMIAASAGHENIVTYLLDSGLSVNVNTVNSTG------QNCLHYAASRNRISIARQLLLAGIQADLRDWGGNTPLHRAVTKGHS 150          
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Match: A0A482WCZ4_9CUCU (Ankyrin repeat domain containing protein n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482WCZ4_9CUCU)

HSP 1 Score: 58.2 bits (139), Expect = 2.930e-6
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1
Query:  193 DIQDRFGRTALHWAAGQGHLETVIALLSSGASIHARSHCNASPLMLAASGGHDNIVRHLLHVGAS 387
            D+ D  G TALHWAA  G   TV  LL++GA I        +PL LAASGGH +++R L+  GA+
Sbjct:  110 DVCDCNGLTALHWAAAYGQFNTVQLLLANGAEIDKLGPEEETPLTLAASGGHHDVIRLLIDKGAN 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1269.2237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5L664_9PHAE2.300e-10151.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5T2_9PHAE8.360e-9950.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7M3_ECTSI1.250e-9557.00Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G7L7_ECTSI1.770e-3543.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G7L8_ECTSI3.000e-1446.03Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
Q9VL58_DROME4.660e-944.44LP07441p n=19 Tax=melanogaster group TaxID=32346 R... [more]
A0A6P4KDE5_DROBP2.750e-843.33DNA-binding protein RFXANK n=3 Tax=ananassae subgr... [more]
UPI000A1D19FF9.400e-842.22DNA-binding protein RFXANK n=1 Tax=Drosophila serr... [more]
A0A158QI75_RODNA6.120e-730.95Uncharacterized protein n=1 Tax=Rodentolepis nana ... [more]
A0A482WCZ4_9CUCU2.930e-647.69Ankyrin repeat domain containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1269contigH-canaliculatus_F_contig1269:27010..28461 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.2
Seed ortholog evalue8.3e-82
Seed eggNOG ortholog2880.D7G7M3
Preferred nameASB7
KEGG koko:K10329
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat
Ec32 orthologEc-22_001900.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-22_001840.1
Exons1
Model size1452
Cds size1452
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928989.018656-CDS-H-canaliculatus_F_contig1269:27009..284611622928989.018656-CDS-H-canaliculatus_F_contig1269:27009..28461Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1269 27010..28461 -
1696845640.2288766-CDS-H-canaliculatus_F_contig1269:27009..284611696845640.2288766-CDS-H-canaliculatus_F_contig1269:27009..28461Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1269 27010..28461 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1269.2237.1prot_H-canaliculatus_F_contig1269.2237.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1269 27010..28461 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1269.2237.1

>prot_H-canaliculatus_F_contig1269.2237.1 ID=prot_H-canaliculatus_F_contig1269.2237.1|Name=mRNA_H-canaliculatus_F_contig1269.2237.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=484bp
LINHQLLVAKIFPRTQTEACGEKAAGGTVNSAPVGGEQEIIHCAASQGIT
SSALALLADRRVHPDIQDRFGRTALHWAAGQGHLETVIALLSSGASIHAR
SHCNASPLMLAASGGHDNIVRHLLHVGASAPARHCRGPSGHAEWRTTALH
YAARGGHVGVVATLLNTGFSRDQRDGAGLTPTEISARSSHASSPAVTYLL
LDHGGGGQLVHNYVNMALEDVEIVRGLAQGGAFLNWQDHQHGRTPLHRAV
HFRHFQILKILLKFGANPNLRDRHGITPLHLVAVSGCTAGAAELLEVGSD
TTARTNDSYSPLHLAVAFNRVGVVRLLLRAPGSSTELRDLYLGITPLSWA
ARLGFTPMLCVLLEAGADVESRSPGGLTPLHWACRSNHAETAESLLDAGA
DLDVVDGTGADPGSVIGLGDPVGCTRPGGAPFMSAMAVNEGERRLDSAAA
NYIRSALEGAKKDRAWRRRGWLVVLARRRALGMA
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mRNA from alignment at H-canaliculatus_F_contig1269:27010..28461-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1269.2237.1 ID=mRNA_H-canaliculatus_F_contig1269.2237.1|Name=mRNA_H-canaliculatus_F_contig1269.2237.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1452bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1269:27010..28461- (Hapterophycus canaliculatus Oshoro5f female)
CTCATCAATCATCAGCTGCTCGTGGCCAAGATATTCCCTCGGACACAAAC CGAGGCCTGCGGCGAAAAAGCGGCGGGGGGAACGGTGAACAGTGCTCCCG TCGGGGGAGAGCAAGAGATTATCCATTGTGCAGCCTCGCAAGGTATCACA TCCTCGGCCCTAGCCCTGCTTGCTGACCGGCGTGTCCACCCTGACATCCA AGATCGCTTCGGCAGGACCGCGCTTCACTGGGCTGCCGGGCAAGGACACC TTGAAACTGTCATAGCTCTACTAAGCTCAGGAGCTTCGATCCACGCTCGG AGCCACTGCAATGCTAGCCCCCTCATGCTGGCCGCCTCAGGAGGGCATGA CAACATTGTCCGCCACCTGCTTCATGTAGGGGCAAGTGCACCTGCCCGGC ACTGCCGAGGTCCTTCCGGCCATGCGGAATGGAGGACAACCGCCCTTCAC TATGCTGCCAGGGGCGGTCACGTCGGAGTGGTGGCAACGCTCCTGAATAC CGGCTTCAGCAGGGACCAACGCGATGGGGCCGGTCTGACGCCGACAGAAA TATCCGCCAGATCAAGCCACGCGTCCTCCCCAGCAGTCACCTATCTCCTT CTTGATCATGGCGGGGGTGGACAGCTGGTACACAACTACGTCAACATGGC TCTGGAGGATGTCGAGATCGTGCGAGGTCTGGCGCAAGGCGGGGCGTTCT TGAACTGGCAGGATCACCAACACGGTCGAACGCCGCTGCACCGCGCAGTG CACTTCCGGCACTTCCAGATTCTCAAGATCCTGCTCAAGTTTGGCGCTAA CCCGAACCTCAGGGACCGTCATGGCATCACCCCGTTGCACTTAGTCGCCG TCAGCGGATGCACGGCGGGGGCGGCCGAGCTGCTCGAGGTTGGCTCCGAC ACCACAGCGCGCACGAATGACAGCTACTCGCCGCTCCATCTGGCCGTTGC TTTCAACAGAGTGGGCGTCGTCAGACTGCTGCTACGTGCCCCGGGATCCT CAACAGAGCTCCGCGACTTGTACCTTGGCATTACGCCGCTCTCATGGGCG GCTAGGCTCGGCTTTACGCCCATGCTGTGCGTCTTGTTGGAGGCGGGAGC GGACGTCGAATCCAGATCTCCCGGGGGCTTGACCCCTCTCCACTGGGCAT GCCGCTCCAACCATGCTGAGACCGCCGAGTCCTTGCTCGACGCGGGAGCA GATCTAGACGTTGTGGACGGTACAGGTGCCGATCCCGGCTCCGTGATCGG CCTGGGCGATCCCGTCGGCTGCACAAGACCGGGGGGTGCTCCCTTCATGA GCGCCATGGCTGTGAATGAGGGAGAGCGACGCCTGGATTCTGCAGCGGCG AACTACATCCGGTCAGCACTTGAGGGCGCCAAGAAGGACCGCGCCTGGCG TCGTCGAGGCTGGTTGGTCGTCCTCGCGAGGAGGCGTGCGCTAGGCATGG CA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1269:27010..28461-

>mRNA_H-canaliculatus_F_contig1269.2237.1 ID=mRNA_H-canaliculatus_F_contig1269.2237.1|Name=mRNA_H-canaliculatus_F_contig1269.2237.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2904bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1269:27010..28461- (Hapterophycus canaliculatus Oshoro5f female)
CTCATCAATCATCAGCTGCTCGTGGCCAAGATATTCCCTCGGACACAAAC
CGAGGCCTGCGGCGAAAAAGCGGCGGGGGGAACGGTGAACAGTGCTCCCG
TCGGGGGAGAGCAAGAGATTATCCATTGTGCAGCCTCGCAAGGTATCACA
TCCTCGGCCCTAGCCCTGCTTGCTGACCGGCGTGTCCACCCTGACATCCA
AGATCGCTTCGGCAGGACCGCGCTTCACTGGGCTGCCGGGCAAGGACACC
TTGAAACTGTCATAGCTCTACTAAGCTCAGGAGCTTCGATCCACGCTCGG
AGCCACTGCAATGCTAGCCCCCTCATGCTGGCCGCCTCAGGAGGGCATGA
CAACATTGTCCGCCACCTGCTTCATGTAGGGGCAAGTGCACCTGCCCGGC
ACTGCCGAGGTCCTTCCGGCCATGCGGAATGGAGGACAACCGCCCTTCAC
TATGCTGCCAGGGGCGGTCACGTCGGAGTGGTGGCAACGCTCCTGAATAC
CGGCTTCAGCAGGGACCAACGCGATGGGGCCGGTCTGACGCCGACAGAAA
TATCCGCCAGATCAAGCCACGCGTCCTCCCCAGCAGTCACCTATCTCCTT
CTTGATCATGGCGGGGGTGGACAGCTGGTACACAACTACGTCAACATGGC
TCTGGAGGATGTCGAGATCGTGCGAGGTCTGGCGCAAGGCGGGGCGTTCT
TGAACTGGCAGGATCACCAACACGGTCGAACGCCGCTGCACCGCGCAGTG
CACTTCCGGCACTTCCAGATTCTCAAGATCCTGCTCAAGTTTGGCGCTAA
CCCGAACCTCAGGGACCGTCATGGCATCACCCCGTTGCACTTAGTCGCCG
TCAGCGGATGCACGGCGGGGGCGGCCGAGCTGCTCGAGGTTGGCTCCGAC
ACCACAGCGCGCACGAATGACAGCTACTCGCCGCTCCATCTGGCCGTTGC
TTTCAACAGAGTGGGCGTCGTCAGACTGCTGCTACGTGCCCCGGGATCCT
CAACAGAGCTCCGCGACTTGTACCTTGGCATTACGCCGCTCTCATGGGCG
GCTAGGCTCGGCTTTACGCCCATGCTGTGCGTCTTGTTGGAGGCGGGAGC
GGACGTCGAATCCAGATCTCCCGGGGGCTTGACCCCTCTCCACTGGGCAT
GCCGCTCCAACCATGCTGAGACCGCCGAGTCCTTGCTCGACGCGGGAGCA
GATCTAGACGTTGTGGACGGTACAGGTGCCGATCCCGGCTCCGTGATCGG
CCTGGGCGATCCCGTCGGCTGCACAAGACCGGGGGGTGCTCCCTTCATGA
GCGCCATGGCTGTGAATGAGGGAGAGCGACGCCTGGATTCTGCAGCGGCG
AACTACATCCGGTCAGCACTTGAGGGCGCCAAGAAGGACCGCGCCTGGCG
TCGTCGAGGCTGGTTGGTCGTCCTCGCGAGGAGGCGTGCGCTAGGCATGG
CACTCATCAATCATCAGCTGCTCGTGGCCAAGATATTCCCTCGGACACAA
ACCGAGGCCTGCGGCGAAAAAGCGGCGGGGGGAACGGTGAACAGTGCTCC
CGTCGGGGGAGAGCAAGAGATTATCCATTGTGCAGCCTCGCAAGGTATCA
CATCCTCGGCCCTAGCCCTGCTTGCTGACCGGCGTGTCCACCCTGACATC
CAAGATCGCTTCGGCAGGACCGCGCTTCACTGGGCTGCCGGGCAAGGACA
CCTTGAAACTGTCATAGCTCTACTAAGCTCAGGAGCTTCGATCCACGCTC
GGAGCCACTGCAATGCTAGCCCCCTCATGCTGGCCGCCTCAGGAGGGCAT
GACAACATTGTCCGCCACCTGCTTCATGTAGGGGCAAGTGCACCTGCCCG
GCACTGCCGAGGTCCTTCCGGCCATGCGGAATGGAGGACAACCGCCCTTC
ACTATGCTGCCAGGGGCGGTCACGTCGGAGTGGTGGCAACGCTCCTGAAT
ACCGGCTTCAGCAGGGACCAACGCGATGGGGCCGGTCTGACGCCGACAGA
AATATCCGCCAGATCAAGCCACGCGTCCTCCCCAGCAGTCACCTATCTCC
TTCTTGATCATGGCGGGGGTGGACAGCTGGTACACAACTACGTCAACATG
GCTCTGGAGGATGTCGAGATCGTGCGAGGTCTGGCGCAAGGCGGGGCGTT
CTTGAACTGGCAGGATCACCAACACGGTCGAACGCCGCTGCACCGCGCAG
TGCACTTCCGGCACTTCCAGATTCTCAAGATCCTGCTCAAGTTTGGCGCT
AACCCGAACCTCAGGGACCGTCATGGCATCACCCCGTTGCACTTAGTCGC
CGTCAGCGGATGCACGGCGGGGGCGGCCGAGCTGCTCGAGGTTGGCTCCG
ACACCACAGCGCGCACGAATGACAGCTACTCGCCGCTCCATCTGGCCGTT
GCTTTCAACAGAGTGGGCGTCGTCAGACTGCTGCTACGTGCCCCGGGATC
CTCAACAGAGCTCCGCGACTTGTACCTTGGCATTACGCCGCTCTCATGGG
CGGCTAGGCTCGGCTTTACGCCCATGCTGTGCGTCTTGTTGGAGGCGGGA
GCGGACGTCGAATCCAGATCTCCCGGGGGCTTGACCCCTCTCCACTGGGC
ATGCCGCTCCAACCATGCTGAGACCGCCGAGTCCTTGCTCGACGCGGGAG
CAGATCTAGACGTTGTGGACGGTACAGGTGCCGATCCCGGCTCCGTGATC
GGCCTGGGCGATCCCGTCGGCTGCACAAGACCGGGGGGTGCTCCCTTCAT
GAGCGCCATGGCTGTGAATGAGGGAGAGCGACGCCTGGATTCTGCAGCGG
CGAACTACATCCGGTCAGCACTTGAGGGCGCCAAGAAGGACCGCGCCTGG
CGTCGTCGAGGCTGGTTGGTCGTCCTCGCGAGGAGGCGTGCGCTAGGCAT
GGCA
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