mRNA_H-canaliculatus_F_contig126.2183.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: D8LE29_ECTSI (Thiaminase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE29_ECTSI) HSP 1 Score: 348 bits (894), Expect = 6.180e-106 Identity = 193/336 (57.44%), Postives = 230/336 (68.45%), Query Frame = 1
Query: 343 LESMRKD-GGGNLVSGVSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNWSESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASLLALYRQAMELEFAFFDAQTEGSIGDDGPRLETD--ERSGARKSSNVRSGEENVRGHGHYRGVHQRVSLLCVDFDDTLTDGDTTSLLVETAIAQRQSAEDKAAVQREWESLTSAFLREWGEVTEECLATKV 1341
++ MRKD G G+ + G SLW+DCQ EAMRSLHHPWTLGLATGKTS +SFK YVAQDAYFLRAFAKAYAYAL KA+DE+ +RAFH+LIGSVL+ELGLHASYS KWG+DV N ELR AFPNW+ES YAEWIETYSS DFE+AA LVESLLD+ S GADY SL ALYR+AMELEFAFFDAQ +G G + LE +G R+ + + G ++ G G +RGVH+R++LLCVDFDDTLT+GDT SLLVETA AQR++ ED+ + REW LT FL +W E E+ L+TK+
Sbjct: 1 MDGMRKDVGKGSTLPG---SLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLRAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVAN---------------------------------------------ELRHAFPNWTESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDG--GTEAAMLEQSVGAEAGGRQGMSAQPGGQDAGGRGRFRGVHERLALLCVDFDDTLTEGDTISLLVETAKAQRETPEDRVDLGREWGLLTRTFLGKWSETIEDSLSTKL 286
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A6H5J5C1_9PHAE (TENA_THI-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5C1_9PHAE) HSP 1 Score: 330 bits (847), Expect = 6.380e-98 Identity = 196/394 (49.75%), Postives = 238/394 (60.41%), Query Frame = 1
Query: 352 MRKDGGGNLVSGVSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKN---------------TP----------------PPVMATTEYVEFLLAV--ASDPTSSVAQVLAAMVPCMRLYA-------------------------------FLGKELRGAFPNWSESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASLLALYRQAMELEFAFFDAQTEGSIGDDGPRLETDERSGARKSSNVRSGEENVRGHGHYRGVHQRVSLLCVDFDDTLTDGDTTSLLVETAIAQRQSAEDKAAVQREWESLTSAFLREWGEVTEECLATKV 1341
MR D G + SLW+DCQ EAMRSLHHPWTLGLATGKTS +SFK YVAQDAYFLRAFAKAYAYAL KA+DE+ +RAFH+LIGSVL+ELGLHASYS KWG+DV N TP V +++ L + + A+ L R +A F+ +ELR A PNW+ES YAEWIETYSS DFE+AA LVESLLD+ S GADY SL AL R+AMELEFAFFDAQ +G +G R+ +V+ G ++ G G +RGVH+R++LLCVDFDDTLT+GDTTSLLVETA AQR++ ED+ + REW LT FL +W E E+ L+TK+
Sbjct: 1 MRMDVGERFT--LPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLRAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVANVRAKTTGVKLQIGSCTPLNFGLTGVWNVVHCRFASVKLHSDWAHLLYPINQGNKQMQVSAKELGERAMKRRSFAGLYLASLQIGLYRRQFHQCNVMTFADVLSSLFVAQELRDALPNWTESPYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALCRKAMELEFAFFDAQLDGVTEAAMLEQSVGAEAGGRQGMSVQPGGKDAGGRGRFRGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSETIEDSLSTKL 392
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A7S3XK69_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK69_HETAK) HSP 1 Score: 192 bits (489), Expect = 4.490e-52 Identity = 103/205 (50.24%), Postives = 133/205 (64.88%), Query Frame = 1
Query: 364 GGGNLVSG----VSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNW---SESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASL 957
GGG ++ +S LWED EA +SLHHPW +GL G + SF +Y+AQDA+FL +FAKAYA+AL K D +G+ AFH LIG+VLDEL LH+ + +WGVD+ P AT +Y FL+A A S+ A VLAAM PCMRLYA LG+ LR AFP +AEW++TY+S +FE AA VE LLD+Y+ + A L
Sbjct: 37 GGGAAMTAEEKPISQILWEDNLKEAQKSLHHPWVVGLGLGTLEKESFAQYIAQDAFFLESFAKAYAFALGKCSDREGIVAFHGLIGAVLDELKLHSGLAERWGVDLAALREPKQATDDYTGFLMATAQAADSTPADVLAAMAPCMRLYAHLGRTLRAAFPERLGRPGHPFAEWVDTYASDEFEAAARTVEDLLDKYAGASTPARL 241
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A835YZC1_9STRA (Putative TenA family transcriptional activator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC1_9STRA) HSP 1 Score: 187 bits (476), Expect = 3.900e-50 Identity = 109/224 (48.66%), Postives = 141/224 (62.95%), Query Frame = 1
Query: 382 SGVSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRA-------FAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNT---PPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNW-SESVYAEWIETYSSADFENAAVLVESLLDEYSQGAD----YASLLALYRQAMELEFAFFDA 1008
+ VSA LW C+ EA+ SL+HP+ L LATG + +F+ Y+ QDA +L+A FA+AY +AL KA D +G+RAFH L+GS L+EL LH +++ KWGV++ P+ AT Y FLL + D S+ A VLAAM PCMRLYAFLG L A S++ Y WI YSS +F AA VE LLD+Y+ A Y +LLA YR AM LE+AFFDA
Sbjct: 13 NSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDA 236
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A7S4PR83_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PR83_GUITH) HSP 1 Score: 192 bits (488), Expect = 4.390e-50 Identity = 123/328 (37.50%), Postives = 180/328 (54.88%), Query Frame = 1
Query: 370 GNLVSGVSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYAL-IKAD--DEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKEL-RGAFPNWS--ESVYAEWIETYSSADFENAAVLVESLLDEYS--QGADYASLLALYRQAMELEFAFFDAQTEGSIGDDGPRLETDERSGARKSSNVRSGEENVRGHGHYRGVHQRVSLLCVDFDDTLTDGDTTSLLVETAIAQRQSAEDKAAVQREWESLTSAFLREWGEVTEECL 1329
G + + VS L+ + A R L+HP+ G+A G +SSF+ YVAQDA+FLR FA AY+ A I +D D G FH L V +EL +H+SY+ KW VD+ N P +T +YV+F++ +A + ++ + A++ PCMRLYA+LG +L + F + S E++Y EWI TYSS +FE A +E LLD+Y+ + DY L+ +Y +AMELEFAFFDAQ P L + G+ + +L VDFD TLT+ DTT +V+T I AE + A + +++ F +G+ E L
Sbjct: 2 GVMRTSVSFRLFTETLPIATRCLYHPFVSGIAQGSLKKSSFQNYVAQDAFFLRGFADAYSMARQIVSDNGDSPGAEKFHTLYNGVQEELRMHSSYAQKWNVDLTNVTPN-KSTQDYVDFVMEIAKKDSKKISLICASLTPCMRLYAWLGSKLGKARFGDVSSDENIYVEWINTYSSDEFEELAKTLEDLLDDYATKESTDYEDLVRIYSRAMELEFAFFDAQ---------PDLPA----------------------SSFEGI--KPDILAVDFDQTLTEQDTTETIVKTGIHNIPDAEAREAQLQSMNNVSKTFYENYGKKIEGLL 295
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A8J5XNG5_DIALT (Thiamine phosphate synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNG5_DIALT) HSP 1 Score: 196 bits (499), Expect = 9.070e-48 Identity = 125/310 (40.32%), Postives = 169/310 (54.52%), Query Frame = 1
Query: 376 LVSGVSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNWSESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASLLALYRQAMELEFAFFDAQTEGSIGDDGPRLETDERSGARKSSNVRSGEENVRGHGHYRGVHQRVSLLCVDFDDTLTDGDTTSLLVETAIAQRQSAEDKAAVQREWESLTSAFLREW 1305
+ + +S+ LW A RSLH P+ L LA G R+SF+ YVAQDA+FLRAFA+AYA AL + + + + +LI V+DEL LH Y+ KW +D+ P AT+ Y EFLLA+A + +A VLAAM PCMRLYAFLG+ L AFP+ S + YA+W+ TYSS +F A +E+LLDE + G + A Y +AM+LE FF +Q G DG D L VDFD+T TD T LL + A +A+++AA EW +L+ F RE+
Sbjct: 1 MTTRLSSKLWASALPLATRSLHSPFVLRLAAGTLPRASFQGYVAQDAFFLRAFARAYALALSRCESDGAIGELSSLIAGVVDELALHHGYAAKWDLDLAGVRPTA-ATSAYTEFLLALARS-DAPIAVVLAAMTPCMRLYAFLGQRLCAAFPDASHA-YADWLRTYSSDEFGALAGRIEALLDECADGVPLDAARAAYTRAMQLELDFFASQP-GVAPVDGLLAPADRL------------------------------LFAVDFDETATDAQTLPLLAQLAAEHAGAADERAARVAEWRTLSETFAREY 276
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A1A3I768_9MYCO (TENA_THI-4 domain-containing protein n=2 Tax=Mycobacterium sp. 1423905.2 TaxID=1856859 RepID=A0A1A3I768_9MYCO) HSP 1 Score: 171 bits (433), Expect = 6.810e-45 Identity = 100/216 (46.30%), Postives = 129/216 (59.72%), Query Frame = 1
Query: 376 LVSGVSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNWSESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASLLALYRQAMELEFAFFDAQTEGS 1023
+V +S SLW Q A +L HP+ G+A+G+ R+ F YV QDA +L A+ +AYA AL K+ D G+ F L+ + DEL LH Y+ +WGVD+ P P AT+ Y FLLAVA+ V + AAM PCMRLYA LG++L A ES+Y EW+ TYSS +FE +E LLD Y G D L++LYRQAME E FFDA S
Sbjct: 1 MVVSLSDSLWRRNQDIARAALQHPFVQGIASGELVRAKFAHYVGQDAAYLDAYCRAYALALAKSPDRDGLMVFKELLDAASDELRLHQGYAARWGVDLYPAPDP--ATSAYTNFLLAVAA--LEPVGHIAAAMTPCMRLYAHLGQQL--ATNTKPESLYREWVMTYSSPEFEALVRRLEELLDRY--GGDQDRLISLYRQAMEFELRFFDAANRPS 208
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A523IKR8_9DELT (TenA family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523IKR8_9DELT) HSP 1 Score: 170 bits (430), Expect = 1.440e-44 Identity = 97/212 (45.75%), Postives = 134/212 (63.21%), Query Frame = 1
Query: 388 VSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNWSESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASLLALYRQAMELEFAFFDAQTEGS 1023
+ +LW+ + A L+HP+ G+A+G+ +R+SF+ YVAQDAYFL AFA+AY AL K+ D G+ F L+ V +EL LH SY+ +WG+ ++ P P+ +T Y +FLL AS V AAM PC+RLYA+LG++L ES YAEW++TYSS D E A +E+LLD Y + A L LYR+AMELE AFF+A E +
Sbjct: 2 TAQALWQRNRDLADACLNHPFVQGIASGQLARASFQVYVAQDAYFLEAFARAYGLALAKSPDRAGIVVFKDLLVGVFEELALHRSYAERWGISLE--PEPLASTRAYTDFLLRTAS--LEPVGHTAAAMTPCLRLYAWLGQQLAPKLD--PESPYAEWVKTYSSPDLEALAARLEALLDRYR--GEPARLAELYRRAMELELAFFEAVWESA 205
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A2C9SVI5_9MYCO (Aminopyrimidine aminohydrolase n=1 Tax=Mycobacterium sp. shizuoka-1 TaxID=2039281 RepID=A0A2C9SVI5_9MYCO) HSP 1 Score: 169 bits (428), Expect = 2.680e-44 Identity = 99/210 (47.14%), Postives = 129/210 (61.43%), Query Frame = 1
Query: 388 VSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNWSESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASLLALYRQAMELEFAFFDAQTE 1017
+SA LW + A L HP+ GL G F Y+AQDA+FL +FA+AYA AL ++ D + V A LIG V +ELGLHASY+ WG+D+ P + AT+ Y EFLLA A+ T V + AAM PCMRLYA+LG+ L A + YA+W+ TY+ DFEN A L+E+LLDE Q +D A++ YR+AM LE FF A E
Sbjct: 3 MSAQLWSENADLAAEVLAHPFVRGLGDGTLPTERFAAYLAQDAFFLESFARAYALALARSADTRSVLALADLIGGVREELGLHASYAASWGIDMAGVQP-LPATSAYTEFLLATAA--THEVGVIYAAMTPCMRLYAWLGQSLDAA----TAGPYAQWVRTYADPDFENIARLLEALLDE--QASDSAAVHHAYRRAMRLELGFFAAAYE 203
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Match: A0A7C2BN83_9FIRM (Aminopyrimidine aminohydrolase n=2 Tax=Bacteria TaxID=2 RepID=A0A7C2BN83_9FIRM) HSP 1 Score: 169 bits (428), Expect = 2.760e-44 Identity = 97/208 (46.63%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 385 GVSASLWEDCQSEAMRSLHHPWTLGLATGKTSRSSFKKYVAQDAYFLRAFAKAYAYALIKADDEKGVRAFHALIGSVLDELGLHASYSVKWGVDVKNTPPPVMATTEYVEFLLAVASDPTSSVAQVLAAMVPCMRLYAFLGKELRGAFPNWSESVYAEWIETYSSADFENAAVLVESLLDEYSQGADYASLLALYRQAMELEFAFFDA 1008
GV++ LW+ + A L HP+ G+A+G F+ YV QDAYFL AFA+ YA L KA D++G+ F L+ L EL LH Y+ +WGVD++ P P AT Y +FLL A+ V +AA PCMRLYA+LG +L ES YAEW+ TY+ ADF+ A +E LLD Y G D + L LYR+AMELE+AFFDA
Sbjct: 2 GVASHLWQQNRDLAEACLEHPFVQGIASGDLPVERFRWYVGQDAYFLDAFARGYALLLAKAPDQEGLVKFKELLDGALQELRLHRGYAQRWGVDLQPVPAP--ATAAYTDFLLRTAA--LEPVGHGVAAQTPCMRLYAYLGSQLLPLLN--PESPYAEWVHTYAGADFQGLAQTLEDLLDRY--GGDRSRLQQLYRRAMELEYAFFDA 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig126.2183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig126.2183.1 >prot_H-canaliculatus_F_contig126.2183.1 ID=prot_H-canaliculatus_F_contig126.2183.1|Name=mRNA_H-canaliculatus_F_contig126.2183.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=463bp MRTHSRAIAPALPLVYALRLSWADPKALSFAPGCYSRRTPSFAIGKAPTAback to top mRNA from alignment at H-canaliculatus_F_contig126:57311..62637+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig126.2183.1 ID=mRNA_H-canaliculatus_F_contig126.2183.1|Name=mRNA_H-canaliculatus_F_contig126.2183.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5327bp|location=Sequence derived from alignment at H-canaliculatus_F_contig126:57311..62637+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig126:57311..62637+ >mRNA_H-canaliculatus_F_contig126.2183.1 ID=mRNA_H-canaliculatus_F_contig126.2183.1|Name=mRNA_H-canaliculatus_F_contig126.2183.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2778bp|location=Sequence derived from alignment at H-canaliculatus_F_contig126:57311..62637+ (Hapterophycus canaliculatus Oshoro5f female)back to top |