mRNA_H-canaliculatus_F_contig1257.2159.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1257.2159.1
Unique NamemRNA_H-canaliculatus_F_contig1257.2159.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D7FT34_ECTSI (Ankyrin 2, neuronal isoform 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT34_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.440e-82
Identity = 265/438 (60.50%), Postives = 303/438 (69.18%), Query Frame = 1
Query:   19 YPEREALRALCNEIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DTDVRYGENELSSLDSAASHGHISVLKALVQHGVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQYLADKVVDLLLRWGADETKTNGDGNVP-----------AEVIGTYAAEEDTPLSEEERGEVEERLRRLLVGAPSDRAWRRRGWVVLCRNRVLL 1296
            YP+REALR  C E+ A+V  +A+ KQWADW+R+PVEHAAA+G  +LV  LLKAGGTGA G RG  GRT+L AAA+GGN  VV A+L AGAKPD+ +RSG K+R  LH AALHGHEAA RVLMMAGA+V  LD +KRG    XXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +  +R+GE+ELS LDSA S GH+ VL+ALV HGVD+NA DSTGYTALH    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+NSCCDVV                            AD+VVDLLLRWGADE K N +G+VP           A+V+GT  A+++  L E +R E +E + RLL  A  DR WRRRGW+VLCR+R LL
Sbjct:    2 YPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVTALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRGPLHHAALHGHEAATRVLMMAGANVNLLDGEKRGXXXXXXXXXXXXXXXXXXXXXASPNGKDKKGDSPLHVAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMVGPLLMAGANPGIRFGEHELSPLDSAVSDGHMGVLRALVLHGVDINAGDSTGYTALHTAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFNSCCDVVRXXXXXXXXXXXXXXXXXXXXXXXXXTQADRVVDLLLRWGADEGKANHNGDVPVPLLRFLPRHTADVVGTSVADDELVLPEGQRKEKKEHVIRLLANAHVDRTWRRRGWLVLCRSRYLL 439          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D7FXM2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM2_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 6.020e-73
Identity = 241/323 (74.61%), Postives = 252/323 (78.02%), Query Frame = 1
Query:  121 VEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDVRYGENELSSLDSAASHGHISVLKALVQH-GVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQYLADKVVDLLLR 1086
            +EHAAA GN ELV  LLKAGGTG PG RGCRGRTLL AA                A PD+  RSGSKRRSALHRAALHGHEAAARVLMMAGA+VGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  D+RYGENE S LDSAASHGHISVLKAL  H GVDVNAVDSTGYTALH                                   AR N+CCDVVL LLRRGAK+DARESAGE+PLH+A+QYLAD++VD LLR
Sbjct:   17 IEHAAANGNFELVTALLKAGGTGTPGLRGCRGRTLLDAAXXXXXXXXXXXXXXXXATPDLCARSGSKRRSALHRAALHGHEAAARVLMMAGANVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDIRYGENEPSPLDSAASHGHISVLKALAHHEGVDVNAVDSTGYTALHMAADNNQSSAVGVLIAAGTDLESQDIHQWTPLHCAARCNTCCDVVLELLRRGAKMDARESAGEYPLHIATQYLADEIVDFLLR 339          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: A0A6H5JK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK08_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.270e-49
Identity = 155/436 (35.55%), Postives = 167/436 (38.30%), Query Frame = 1
Query:  121 VEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------DTDVRYGENELSSLDSAASHGHISVLKALVQH-GVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------------------RYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQYLADKVVDLLLR 1086
            VEHAAA GN ELV  LLKAGGTG+PG RGCRGRTLL A                   PD   RS SKRRSALHRAALHGHEAAARVLMMAGA+VGSLDA KRGPLAL                                                                                                                                                                          D D+R+GENELS+LDSA SHGHISVLKAL  H GVDVNAVD TGYTALH                                   A                           RYN+CCDVVL LLRRGAK+DARESAGE+PLH+A+QYLAD++VDLLLR
Sbjct:   35 VEHAAANGNFELVTALLKAGGTGSPGLRGCRGRTLLDAXXXXXXXXXXXXXXXXXXTPDRCARSASKRRSALHRAALHGHEAAARVLMMAGANVGSLDAVKRGPLALAVRRNVVESLSIRCDLDCSNLSSSPRETCCAHERGEHEHLVCSLLLGGACPSAKDKKGDAPLHLAAWRGRAGIASALLLKGGDKNALDSLGRIFLWRCFRHKAGVGQLRRVLGRMQRTLHATRRVSHGVSRPPPPPCFRRFISAVRKSPLIVAAEHGARGTIDALLVAGADPDIRHGENELSALDSAVSHGHISVLKALAHHEGVDVNAVDPTGYTALHMAADNNQSSAVGVLIAAGADLESQDIHQWTPLHCAASLSDQARKTSSLTSSNQQPFCSLLAPTRYNACCDVVLELLRRGAKMDARESAGEYPLHMATQYLADEIVDLLLR 470          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 1.300e-44
Identity = 217/422 (51.42%), Postives = 263/422 (62.32%), Query Frame = 1
Query:   55 EIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDVRY---GENELSSLDSAASHGHISVLKALV-QHGVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------RYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQYLADKVVDLLLRWGADETKTNGDGNVPAEVIGTYAAEEDTPLSEEERGEVEERLRRLLVGAPSDRAWRRRGWVVLCRN 1284
            EIF L+   A+ +QW +WLR P+EHAAA+GNL+L   L+ AG     G RGC GRTLLGAAA G +E+++  LL AGA  D++V  G +  SALH AA  G +   R LM+AGAD    D   R P   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  +R      +  S L+ AA  GH  VLKAL+ +   +V+  +  G+ ALH                                   A        R+ +    + ALL  GA I+AR +  + PLH+A   L   VV+LLLRWGADE   N DG+ PA+V+G     E   L +EER    +R+ R+L  AP+DR+WRRRGW+VL R+
Sbjct:   20 EIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVL---EQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.660e-44
Identity = 144/454 (31.72%), Postives = 196/454 (43.17%), Query Frame = 1
Query:   19 YPEREALRALCNEIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLD-ADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DTDVRYGENE---LSSLDSAASHGHISVLKALVQHGVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQYLA---DKVVDLLLRWGADETKTNGDGNVPAEV----------------------IGTYAAEEDTPLSEEERGEVEERLRRLLVGAPSDRAWRRRGWVVLCRNRV 1290
            YP+R  L     EIF L+   A+ +QWA+WLR P+EHAAA+GNL LV  LL AG  G  G RGCRGRT+L AAA GGN  VV  LL +G   D++V S S RRSALH A++ GHEAAA+ L++AGADV  +D  D    L +                                                                                     D ++R+       ++++D A S GH+ V++A+V++G +V A D+ G TALH                                      NS C+ V+ALL+RG  ++     G   LH+    L+   D++VDLLLRWGA ET  N +G  P+++                      +G  A   D+   E +R  V      LL  AP+DR WRRR W+V+ R R 
Sbjct:    4 YPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNS-CEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARV------LLARAPADRTWRRRCWLVMLRARA 450          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 4.250e-41
Identity = 140/419 (33.41%), Postives = 186/419 (44.39%), Query Frame = 1
Query:   55 EIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLD-ADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDVRYGENELSSLDSAASHGHISVLKALVQHGVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQ---YLADKVVDLLLRWGADETKTNGDGNVPAEVIGTYAA--EEDTPLSEEERGEVEERLRRLLVGAPSDRAWRRRGWVVLCRNRV 1290
            EIF +V+  A+ +QWA WLR P+EHAAA GNL LV  LLKAG  G  G RGCRGR+LL AAA GGN  V+ ALL+AG  PD++V + S  RSAL+++ L  HEAAAR L++AGADV  +D ADK GPL                                                                                      DTD+R  ++  S+L  AA +  I V+KAL++HGVDVN V    +  LH                                    A      + +LALLRRGA +      G   LH+ S+   +  D  VD+LLR GA E   + +G  P ++        +   P+ + E  E+E  +  LL  AP+DR WRRR W+++ R R 
Sbjct:   14 EIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPL------------FAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSH-SALVFAAQYERIDVMKALLEHGVDVN-VGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIE-LLARAPADRTWRRRCWLIMLRERT 417          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D8LDP2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP2_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.230e-37
Identity = 187/391 (47.83%), Postives = 228/391 (58.31%), Query Frame = 1
Query:   25 EREALRALCNEIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDVRYGENELSSLDSAASHGHISVLKALVQHGVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------ARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQ----YLADKVVDLLLRWGADETKTNGDGNVPAEVIG 1146
            +R AL+ L   +F LV+  A+  QW++WLR P+EHA A+G+ +L  TLLKAG  G  G  GC  RTLL AAAEGGNE VV  LL  G   +I V SG + R+ALHRA + GH  AAR LM+AG+D   LD +K      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               D +VR+G++++ S    A    ++ ++ L+QHG +VN+ D  G+TALH                                                A Y   C  + ALLR GA +DA    G  PLH+  +    + + +  DLLLRW ADET T+ DG  P   +G
Sbjct:    6 DRTALKGLEKRLFKLVSEKATSAQWSEWLRAPLEHAVAEGDKDLALTLLKAGANGGSGWEGCNDRTLLQAAAEGGNEEVVSTLLGKGGLEEIDVASGDQDRTALHRALIGGHTGAARALMVAGSDTSLLDTEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDRLTVAEALLTAGADPNVRFGKSKIYSPLFLAVGRSLATMRVLLQHGANVNSPDDLGFTALHWAADFDASAEIDVLVEAGADLEASSSSVHLKDKIGGINSFVGITLLHVAAYFHNCVAMAALLRNGANVDAESDNGLTPLHMVGKTSFSFGSVEAADLLLRWDADETTTDHDGRTPKAQVG 396          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 2.910e-37
Identity = 163/459 (35.51%), Postives = 200/459 (43.57%), Query Frame = 1
Query:   19 YPEREALRALCNEIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDVRYGENELSSLDSAASHGHISVLKALVQHGVDVNA--------------------------------VDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQYLA---DKVVDLLLRWGADETKTNGDGNVPAEVIGTYAAEEDTPLSEEERGEVEERLRRLLVGAPSDRAWRRRGWVVLCRNRV 1290
            YP R  L      IF L++  A+ +QW +WLR P+EHAAA+G   LV  LL AG  G  G  GCRGRTLL AAA GGN  VV  LL+AG  PD++V S S RRSALH +A+ GHEAAAR L++AGAD   +D                                 XXXXXXXXXXXXXXXXXXXXXXXXXXX                                 D D+   ++ LS L  A+  GH+S +K L+  G DV+                                     GYTALH                                     + +    V  LLRRG ++       +  LH+A   +A   D +VDLLLRWG  E   +  GN PA ++            E ER  V      LL  AP+DRAWRRR W+V+ R R 
Sbjct:    2 YPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDP-------------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDI-LDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSG--PMDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHV------LLANAPADRAWRRRSWLVMLRART 420          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.910e-36
Identity = 238/428 (55.61%), Postives = 281/428 (65.65%), Query Frame = 1
Query:   19 YPEREALRALCNEIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDVRYGEN-ELSSLDSAASHGHISVLKALVQHGVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQYLADK----VVDLLLRWGADETKTNGDGNVPAEVIGTYAAEED-TPLSEEERGEVEERLRRLLVGAPSDRAWRRRGWVVLCRN 1284
            YPER  L+ + +EI+ LV+ +A+ +QW +WLR+P+EHAAA+GNL LV++LL AG  G+ G RGCRGRTL+ AAA GG+E VV  LL+AGA+ D++V S S +RSAL+ A + GHE AAR L+ AGADV   D     P+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DV   +N + S+LDSA+                              XXXXXXXXXXXXXXXXXXXXX              A        +  LL  GA + A+++ G  PLHVA  Y   K     VDLLLRWGADET  N  G  PA ++  +  E D T  SE E      R+R LL  AP+DRAWRRR W+V+ R+
Sbjct:    4 YPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGADVTIRDNCDHSALDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSEGGSLAPPLFSATDPRNLKAMHTLLWHGASLTAQDTEGNTPLHVAC-YRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEIN----RVRMLLARAPADRAWRRRCWLVMLRS 426          
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 8.000e-35
Identity = 214/451 (47.45%), Postives = 261/451 (57.87%), Query Frame = 1
Query:   52 NEIFALVAANASQKQWADWLRVPVEHAAAKGNLELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDISVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDVRYGEN-ELSSLDSAASHGHISVLKALVQHGVDVNAVDSTGYTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARYNSCCDVVLALLRRGAKIDARES-----------AGEHPLHVASQYLADKV--VDLLLRWGADETKTNGDGNVPAEVIGTYAAEEDTPLSEE------------------------ERGEVEERLRRLLVGAPSDRAWRRRGWVVLCRNRV 1290
             ++F LV+ +A+  QWA+WLR P+EHA A+GN  L +TLL+AG  G  G +GC GR+LL  A +GGN + V ALL+AG+  D++  +GS RRS LHRA   GH A ARVLM+AGA V  LD         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD   RYG + + S L  A S    ++ +AL++HG DV + D  G+TALH                                   A Y     V+ AL+  GA ++AR S            G  PLH+A+ +       + LLL+ GAD    +G G  P  ++    A + +    +                         R    E L+RLL  AP+DRAWRRRG +VL R R 
Sbjct:   16 EQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHW----------------------------------AAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXXVVTRSSSAEPLKRLLRRAPADRAWRRRGPLVLSRVRA 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1257.2159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT34_ECTSI1.440e-8260.50Ankyrin 2, neuronal isoform 4 n=1 Tax=Ectocarpus s... [more]
D7FXM2_ECTSI6.020e-7374.61Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JK08_9PHAE1.270e-4935.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN0_ECTSI1.300e-4451.42Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5K1F4_9PHAE1.660e-4431.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI4.250e-4133.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDP2_ECTSI2.230e-3747.83Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LBP9_ECTSI2.910e-3735.51Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LS36_ECTSI2.910e-3655.61Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LH19_ECTSI8.000e-3547.45Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1257contigH-canaliculatus_F_contig1257:5385..12394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.5
Seed ortholog evalue2.2e-73
Seed eggNOG ortholog2880.D7FT34
KEGG koko:K21440
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin-repeat protein similar to EsV-1-21
Ec32 orthologEc-28_002270.1
Exons10
Model size1692
Cds size1692
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1257.2159.1prot_H-canaliculatus_F_contig1257.2159.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1257 5385..12394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928971.9168766-CDS-H-canaliculatus_F_contig1257:5384..55031622928971.9168766-CDS-H-canaliculatus_F_contig1257:5384..5503Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 5385..5503 -
1696845635.189443-CDS-H-canaliculatus_F_contig1257:5384..55031696845635.189443-CDS-H-canaliculatus_F_contig1257:5384..5503Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 5385..5503 -
1622928971.9289365-CDS-H-canaliculatus_F_contig1257:5662..61031622928971.9289365-CDS-H-canaliculatus_F_contig1257:5662..6103Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 5663..6103 -
1696845635.2049983-CDS-H-canaliculatus_F_contig1257:5662..61031696845635.2049983-CDS-H-canaliculatus_F_contig1257:5662..6103Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 5663..6103 -
1622928971.9408598-CDS-H-canaliculatus_F_contig1257:6752..67991622928971.9408598-CDS-H-canaliculatus_F_contig1257:6752..6799Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 6753..6799 -
1696845635.2191682-CDS-H-canaliculatus_F_contig1257:6752..67991696845635.2191682-CDS-H-canaliculatus_F_contig1257:6752..6799Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 6753..6799 -
1622928971.9526653-CDS-H-canaliculatus_F_contig1257:7239..73771622928971.9526653-CDS-H-canaliculatus_F_contig1257:7239..7377Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 7240..7377 -
1696845635.2277963-CDS-H-canaliculatus_F_contig1257:7239..73771696845635.2277963-CDS-H-canaliculatus_F_contig1257:7239..7377Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 7240..7377 -
1622928971.9642062-CDS-H-canaliculatus_F_contig1257:7854..79611622928971.9642062-CDS-H-canaliculatus_F_contig1257:7854..7961Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 7855..7961 -
1696845635.2363598-CDS-H-canaliculatus_F_contig1257:7854..79611696845635.2363598-CDS-H-canaliculatus_F_contig1257:7854..7961Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 7855..7961 -
1622928971.9743946-CDS-H-canaliculatus_F_contig1257:8355..85711622928971.9743946-CDS-H-canaliculatus_F_contig1257:8355..8571Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 8356..8571 -
1696845635.249747-CDS-H-canaliculatus_F_contig1257:8355..85711696845635.249747-CDS-H-canaliculatus_F_contig1257:8355..8571Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 8356..8571 -
1622928971.9881868-CDS-H-canaliculatus_F_contig1257:8972..91471622928971.9881868-CDS-H-canaliculatus_F_contig1257:8972..9147Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 8973..9147 -
1696845635.2655575-CDS-H-canaliculatus_F_contig1257:8972..91471696845635.2655575-CDS-H-canaliculatus_F_contig1257:8972..9147Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 8973..9147 -
1622928971.999947-CDS-H-canaliculatus_F_contig1257:10331..104541622928971.999947-CDS-H-canaliculatus_F_contig1257:10331..10454Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 10332..10454 -
1696845635.2760763-CDS-H-canaliculatus_F_contig1257:10331..104541696845635.2760763-CDS-H-canaliculatus_F_contig1257:10331..10454Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 10332..10454 -
1622928972.011914-CDS-H-canaliculatus_F_contig1257:11035..112411622928972.011914-CDS-H-canaliculatus_F_contig1257:11035..11241Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 11036..11241 -
1696845635.286115-CDS-H-canaliculatus_F_contig1257:11035..112411696845635.286115-CDS-H-canaliculatus_F_contig1257:11035..11241Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 11036..11241 -
1622928972.0253265-CDS-H-canaliculatus_F_contig1257:12274..123941622928972.0253265-CDS-H-canaliculatus_F_contig1257:12274..12394Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 12275..12394 -
1696845635.2956333-CDS-H-canaliculatus_F_contig1257:12274..123941696845635.2956333-CDS-H-canaliculatus_F_contig1257:12274..12394Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1257 12275..12394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1257.2159.1

>prot_H-canaliculatus_F_contig1257.2159.1 ID=prot_H-canaliculatus_F_contig1257.2159.1|Name=mRNA_H-canaliculatus_F_contig1257.2159.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=564bp
MPADCCYPEREALRALCNEIFALVAANASQKQWADWLRVPVEHAAAKGNL
ELVATLLKAGGTGAPGQRGCRGRTLLGAAAEGGNERVVLALLKAGAKPDI
SVRSGSKRRSALHRAALHGHEAAARVLMMAGADVGSLDADKRGPLALAVR
GGHENLVCSLLLGGASPSAKDKKGDTPLHLSAWRGRAGIASALLLKGAQM
NALDSQGRTPLIVAAEHGARGSTDALLMANADTDVRYGENELSSLDSAAS
HGHISVLKALVQHGVDVNAVDSTGYTALHMAADNDQSAAVDVLVEAGANI
ESPDIHQWTPLHCAARYNSCCDVVLALLRRGAKIDARESAGEHPLHVASQ
YLADKVVDLLLRWGADETKTNGDGNVPAEVIGTYAAEEDTPLSEEERGEV
EERLRRLLVGAPSDRAWRRRGWVVLCRNRVLLHNSQQQQELAHLEVIRNP
HNGDEGKEDSALNACSGSKSVGSIGGEYHAVKVPRTATTSTAGAGAGAGA
GTGGVGGHRVVSTSVTTSLLGPEPQDDESNGGGREPRRNFPSAIYRLMGL
AEEGVFREIVRFL*
back to top

mRNA from alignment at H-canaliculatus_F_contig1257:5385..12394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1257.2159.1 ID=mRNA_H-canaliculatus_F_contig1257.2159.1|Name=mRNA_H-canaliculatus_F_contig1257.2159.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7010bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1257:5385..12394- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCCGCCGACTGCTGCTATCCAGAGCGCGAAGCGCTCCGGGCCTTGTG CAACGAAATTTTCGCTCTCGTCGCGGCAAACGCGTCACAGAAACAGTGGG CAGACTGGCTTCGCGTCCCGGTGGGTGTGCAGAAGTCTAGGGCTGCTGTC TCGACTGATGCTGTGTTGTGTGTTTTGAAACTGTCAAGTGTATGTGCGCT TCGCGCGCCTCTCGAAAAACTGTGCAAGTGAAACGAATCGACCCGAAGGT GACAAAGCAAACTGCTGTACCTAGTTCATGCAGTCTCTCCTCTAGTTTCA GGGACGCCACGTCTCCCTCTCTGCTTCTCTCCTCAGATCAATTCCTTCTA CGTGCCATCCAACGACGAGTGAGCGCCTTGAGTACTTTCCGGAAAAGCTT CTAAGAGTTGAGTACTACTGCCAACGACGGCAACAACTGCTGTTGACGCG GCTGTGTGAGTCACCCCCTCCAAAAAGCATTCGAGCCACATGCTCCGCGC GGAATAACATCGCTGAGCCAGTAAGACGGCCAATTCAGCTGGTGTGCCCG TAGGAGTTCCTGTCTGTGTAAAAAAACTGGCCAGCGGTCCAACGCCAACG CTTTGCAAGGGCTCCATGGAAAGGAAATATTTGCAGTTCCCCTGAACGAT GACTTTTCGGCCACTTCTTCAGCTGAGCTTCCTTTGGGGCCACAACAGAA ATTGATGCGTGCCCTTACAAACTTCTTTCTAGTTTGATTCAACTGCGGTA GTGCTGAATTGATACCTATCTATCTTTCGGAAGCTTTAACTGAAGGCGTG GTAAACGCTATCCCTGAAATGAAGCACACAAGAAGTCGTGGATGCGATCT CCCCGTATATTGAACACGGCGGTTCCAGGGGACATATCCAGCACCCCCTC TGCTAGCTCAGTTCAGGAGTAGAAACTCTTGGGATTTGCCATGTAGATCG TAAAACGATTTCGAGCTCGATGTAGGAGGAGTGAAGAGGACCAAAAATTA AAGTGTGCAAACTGGAGAACTGTTATTAGGAGCCCTCGGCCGGAATGTAG TCTACACTCTGTATGCCGTGTTCTCACAAGAAGCCGTATGAAGTCGGATC CTTCTTCGCGCACAAGCAATGACGTCCTCGCTGCTCGTGTTTAAAACAAC CAGGTTGAGCACGCAGCGGCCAAAGGCAACCTCGAGCTCGTCGCCACTCT TCTCAAAGCGGGCGGGACCGGAGCACCGGGTCAAAGGGGTTGCCGTGGCC GCACTCTTTTAGGCGCGGCGGCAGAGGGCGGGAACGAAAGAGTTGTGTTG GCTCTTCTGAAAGCGGGTGCGAAGCCGGATATCAGCGTGCGCTCGGGCTC AAAACGAAGGTCTGTGAGGAGCGGGGAGAGAAGCATACATCACAGCACCC GGTTGGCGGTGTCCTTTGCACGTTGGAGTATCTCGCGAGTGTGAACCAGC AGCCTCTTTGCGTCCCGCATGTGATATGTGCATTCGTTCCGCTTTTTGAG ACATGGTATCTGCCTTACTGAAAACATCATCTGCCCTCTAAGAACATGTT TTTTGCTCATCATAGCGCGGTCAACCTCGTCACACAATTGAATCAGTGCT TGAAGACGGCAAGGTGCCTCGCACTATCGTCTGCTGCCTCCGCTACATGC TACCAAGTCTGTTGAAAGAAAACATAATAACACCGTTAGAACACCTCCTG AGGTACGTCGTGTGAGGCGTAGGTCGAGGCTTCTGTTAAGTTCAAAACGG TGAGGGTTTATTGATGGAGACGAGTCTTGAATCGAGAAGTTAATCGGCAG GTGCAAACACGTGACAACCTGCACAACGGGCTAACCAATACACTGAAGAT GCCCAAGGACAATTCCCTAGGATTCATGGACGGCTGCCCTACTCACAGCG GGGTCCTATTCTTTGCATTCAAACCGAAAAACAACAACAGGAGCGCCTTA CACCGCGCGGCACTCCACGGACACGAGGCAGCGGCCCGTGTCCTGATGAT GGCCGGGGCAGACGTGGGCTCACTTGACGCCGACAAGCGCGGCCCTCTGG CCCTTGCCGTACGGTAAGCTCGATTAGCATAGCTGCAAATGCAATGTTCA ATGCCTCAGTCGCGATCGAAAGCGATCAGTACCCATCACCAACTGTCACG GTTACCCTGGGGTGCAGTCAAGCAGTTACATATTTGGGTGGGATTCCAAA GAGGCGTGATAGGTCTGGTAGGTAGCTCCAGAGGAGCGTAGTCTGTGGGG CCCCCAGTTTCGGCCCCACCCTCGATCACTTCGATCCTATGACTACAGCT AGCTATTCTGGCCACAGTGCTCCGTGATAGTGATCACAGCAAATAGCTCT GTGGACAAGCACAGCAACGCCGCTTCAGTGACCTTCCAGCTCATACTTTG GATTCGTTAGTGATCGACGGGCGACTCTATTACAAATCTGATGGATCGCG GTGTTGTTGTGAGAATCGGGAGGCAATCTCACTGCCGCTTCGTACATCTT CGCTCTGGTACACTGTTGTCAGAGTTAACAAACAAAGCATTCCACAACTT TTTCTCATCTTCTGCTCGAGACACCTACAAGGCGCAGCTCACTACTGCAC AAGAGCGCAAGCACCTCGAACTCGGTTCGCTCTAGTGTCATCGCCAGGGC AGAAAGGACCGATCGAGTGTGTCTCTGACAAAAGTAGCATCCGGATCCGA ACAGCAGTCAGCTGTCCAGACCGCGGGCTTCCTTCCAGGGTTATAATCCC TGCAATCGATGCTCCCGCCATGCTAGTGTGGGCTTACAGGAGAGGTAAAG TCGTGCGATGATCTGGTCTTTTCATCTTTAACATAACAAGCCGTGAGTTT CAGACGTTCCATGGATTCCAGATGATCTCAACAAGCAGCCAGAAAAGAAT ATGACCCAAGCGGGATTCAAACTCCGGATATTACTTTTGTCATAGACACA CTTTTATCACAGAGTACAGTCAGCGCTGACTATACCTCCGTGGTAAAAGT GTGTCTATGACAAAGTGAAGTATTTCTTCTGTTCTCGTCCTCGCTTCCTT CTCTCTCGTCGCCACGAGAGCAGTCACTCATTTTCAGAGCTTTCCTACAG TATCGGGTCTGAACCCCAAGACTGGCGATTGACCTTACCGTAACACAACC CCGACACAAAAAGTCATGAATCCTCGGCCCCTTTCCGCTTGCTGTTGGCC GTGTTTCGTCGCGTGCTGATTTGGCGAACGTGCTGCACGTACCGCAGGGG AGGGCACGAAAACCTGGTGTGCTCCTTGCTTCTTGGAGGGGCGAGCCCCA GCGCCAAGGACAAAAAGGGAGATACGCCCCTGCATCTATCTGCTTGGCGC GGACGTGCGGGGATCGCGAGCGCGCTGCTGCTCAAGGGCGCCCAGATGAA TGCCCTCGATAGCCAGGGCCGGGTAAGAGCGAGAGCACAAGAGGCAATCT AAAAGTTGTGCCGCCTAGTAGCTGAAGAACGTCGCTCTTGCGCTGTGGGA AGCTCCTGGCGAGACTTTGGTGGCAGCACTCTGCCGGTGGAAGCGTTGGC CTCAAGTACAGGGGGGAGAACAAGGAAGTCATCCTTGATTCCGCCATGCG GAGACGAAAGCCTACGTGGTCAGCACCCTGGTAAAACTGGCGAGGAAAGT AACACATGCTCCACAGCCTAACCAATGGTCAAGTGCCAGAGGTGGGGCAA CGCGAAGAAACGCGGTTCCCTTTGCGACATCTTGTCCGCCGCCAAAATTA ACGACGCCAAGTGAATACTACAAGAAATGACCCCCCATCCCCTCTCTCCC GCTTGGATTTCCGTGACGGGAAGACTCCGCTGATTGTAGCTGCCGAGCAT GGCGCCCGTGGATCGACGGACGCCCTGCTCATGGCCAACGCGGACACGGA CGTTCGGTACGGAGAAAACGAGCTGTCATCGCTTGACTCGGCTGCTTCGC ACGGGCATATCAGTGTCTTGAAGGCCTTGGTTCAGCACGGGGTGGACGTC AACGCCGTAGACTCTACCGGTTACACAGCGCTGCACATGGTAGGAGGGTT CTGTCTTGGCGGCCGTAGCGTAGTGTACCTAGCAGTGCGGGGAAGAGGAT CTCGCGTACGTGAATTTGGATTCTCAGTCCCCCGCGCCCTTCTTTCTTTC CTAACAGCTGGAGTTTTCCCGCTGCCACGGTTGTCTCTGGTACAGAATGT TTTCGTTCCCCTGTCCGTAAAAGTAAATGGGCTGGTAGGCCTTCTTTTCA CTGTTGTTTCGCTTCGAAGCATCGTTTTTTTTTGCACGTCTTCTTACTTT TTCCCACCTCTTGGTTTCCTTAGTCTCCTCGTCTTTCTCCTTCATCAAAT ATCATTGCTCTACCCGCCCTGACGTTTGAGCCTTCGAACGCAGACGATAT TTTCTCATTTTTTTCTGGGCGTATGTACTTCAGGCCGCGGACAACGACCA GTCGGCGGCGGTGGACGTGCTCGTTGAGGCCGGTGCTAACATCGAGTCAC CAGACATACATCAGTGGACACCTCTGCACTGTGCGGCCAGGTACATCTAC GTCGTCGCCAAAATGTGACGTGTGACGTGTGTACCGAGTAGCGCTTTCAC TCGGATCGGGTAGCACTTTTGTTCTCAATCCTCTTGCGCGTCAAGACTGA CCTTGTGCCGGTGTTTGTGATGAAGTCCACCTCATACCTACCGAAGCGCA CCGGAGAGAGAGCATCCCCCGCTTCCCCCTCCGACTTTTCCCTTAAGAAG GCGAGTGCCCCCCCTTGTTGAGAGTGTGATTCTGCCCGGCGCAACCACGA CGGAGGGCGTTACGGGGAACGACCGAACAGGACATCCGCGAAGAATTCCC ACACAAAAGTCTTGACCTGATAACAACGGTTCCATAGGCAAGAAGCATCT CCCATTAACGCTTGTACGCCACCTCCCGTCGAAGGCGACCGCGACGCATG CAGGAGTTGATGCGTACTTTTGCGATCTACGACGATCCCTGCTCACCCGC CTCCGCGTTCCCGTTAGGTACAACAGCTGCTGCGACGTTGTGCTCGCACT CTTAAGGCGCGGGGCGAAGATCGACGCCCGCGAGTCTGCCGGGGAGCACC CGTTGCACGTTGCGTCTCAGTACCTCGCCGACAAAGTTGTGGACCTCCTT TTGAGGTAGGTGGGAGATGTGTGGGGGCGGACTGTGGTTGTAGCCGAATT TGGAGGATTGAAACTTTTGGTACTGGTACGCAGGCGCGTGTGAATGAGGG GTTGTACTGCGGGATGGGGAGGCAACGTCAGCTCCTAGCGTTCGTGCCAT TACAATTTTTTCTGAGGGGTCGTAGCCGCCGCAGGAGGGATGCGAAACAA GAAGAGCGAGCACCTGTGGGCCGTCGAAAAATACGGCGGGCTTTTGTTCG CGAAATACACGAAATCTTGGTAGCACACGATGGTGTCCACCCACCCAGAA ATAAATGTGGAAAGTCATGTTCCATTGAAAACAGCTGAACCATCAAGTCG CTACGATGAAAAGAAAGTTCTGCTGCTCCTGCTGCTGCTACTATCTACCT GCCATTTATTTTAAGCACGTCGATTTCTTGCCAACCGTTGCTCAGATGGG GTGCCGATGAAACCAAGACCAATGGCGACGGCAACGTTCCAGGTAATCAC GAAGTATTTGCTACTCCAAAGAAGTCTACGACACCCTGCCCCTGATACTC GAAGAACGTCGCATAGCTTTTGTCAAATACGGTTTCAGAACCACACCTTT ACCCCTAAGTTATAGTCAGCGCTGGCTGTAACTCAGTGGTAAAGGTGTCG TTCTGACAAAAGTGACATCCAGGGTTCGATTCCCGCTTGGGTCGTTTCCT TTTCTGGCGACTTTCTGAGAATACCTGAAACGCATGGTAACACCCGAAAC TCACGGTTCGTAAAGTTCAAGATGAAAAGTCCAGATTGACAACGTCACTT TACCTCTCCTGTAAGTCCACGCTCTGGCTTGGGGAAAGCGCTGATTACAG GGGTTACAACCCTGGAGAAACCCGCGATCCAACGGCTAACTGCTGTTCGT ACCCGGATGTTACTTTTGTCAGAACCACACCTTTACCACTGAGTTACAGT CAGCGCTGACTGTAACTCAGTGGTAAAGGTGTGGTTCTGACATACGGAAA CGTACAACCGTGGCTTTGCACAGATCGCGGGGAGGGCCCGAACTCTGAAG TGTGTCTCTTCTGCTGACGCCTTCAAATTCCATGCGTGTAAACATCCCGA CCCATCTCCACCCGCCCCCACCCACCCACCGATCAATACAGCCGAGGTGA TCGGGACATACGCTGCCGAGGAGGATACTCCCCTGTCGGAAGAGGAACGA GGGGAGGTGGAAGAACGCTTGCGACGTCTGCTGGTGGGCGCCCCCTCCGA CAGAGCCTGGCGCCGTCGCGGCTGGGTCGTTCTCTGCCGCAATCGGGTGC TGCTCCACAATAGTCAACAGCAACAGGAGTTGGCCCATTTGGAGGTGATC CGTAACCCCCACAACGGAGACGAGGGGAAGGAAGACTCAGCCCTCAACGC TTGTAGTGGAAGCAAAAGCGTTGGCAGCATCGGGGGAGAGTACCATGCCG TAAAGGTGCCAAGGACGGCGACGACATCGACGGCAGGGGCAGGGGCAGGG GCAGGGGCAGGGACAGGAGGAGTAGGAGGACATAGGGTCGTCTCCACTTC TGTCACAACCTCACTTCTCGGACCCGAGCCCCGTGGCGACGGCGCTGTCG CGCATGGCGTGCACGCTCGCAGCGATACTAGGAACGGTGGCGTTCCTTCC GCCCGTCTGAGTGGCCCGACCCGAGCGGAAGGGCTCGAAAATAGGGCCAG CAACAGCAGCAGCAGTGCTTGCTATGACGACGGCGACGAAGAAGACGACG AGAGCAATGGTGGCGGGAGAGAACCCCGCCGCAATTTTCCCAGTGCAATC TACAGGCTGATGGGCCTGGCCGAGGAGGGAGTGTTCCGCGAGATAGTGAG GTTTTTGTAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1257:5385..12394-

>mRNA_H-canaliculatus_F_contig1257.2159.1 ID=mRNA_H-canaliculatus_F_contig1257.2159.1|Name=mRNA_H-canaliculatus_F_contig1257.2159.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3384bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1257:5385..12394- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCCGCCGACTGCTGCTATCCAGAGCGCGAAGCGCTCCGGGCCTTGTG
CAACGAAATTTTCGCTCTCGTCGCGGCAAACGCGTCACAGAAACAGTGGG
CAGACTGGCTTCGCGTCCCGATGCCCGCCGACTGCTGCTATCCAGAGCGC
GAAGCGCTCCGGGCCTTGTGCAACGAAATTTTCGCTCTCGTCGCGGCAAA
CGCGTCACAGAAACAGTGGGCAGACTGGCTTCGCGTCCCGGTTGAGCACG
CAGCGGCCAAAGGCAACCTCGAGCTCGTCGCCACTCTTCTCAAAGCGGGC
GGGACCGGAGCACCGGGTCAAAGGGGTTGCCGTGGCCGCACTCTTTTAGG
CGCGGCGGCAGAGGGCGGGAACGAAAGAGTTGTGTTGGCTCTTCTGAAAG
CGGGTGCGAAGCCGGATATCAGCGTGCGCTCGGGCTCAAAACGAAGGTTG
AGCACGCAGCGGCCAAAGGCAACCTCGAGCTCGTCGCCACTCTTCTCAAA
GCGGGCGGGACCGGAGCACCGGGTCAAAGGGGTTGCCGTGGCCGCACTCT
TTTAGGCGCGGCGGCAGAGGGCGGGAACGAAAGAGTTGTGTTGGCTCTTC
TGAAAGCGGGTGCGAAGCCGGATATCAGCGTGCGCTCGGGCTCAAAACGA
AGGAGCGCCTTACACCGCGCGGCACTCCACGGACACGAGGCAGCGGCCCG
TGTCCTGATGATGGCCGGGGCAGACGTGGGCTCACTTGACGCCGACAAGC
GCGGCCCTCTGGCCCTTGCCGTACGGAGCGCCTTACACCGCGCGGCACTC
CACGGACACGAGGCAGCGGCCCGTGTCCTGATGATGGCCGGGGCAGACGT
GGGCTCACTTGACGCCGACAAGCGCGGCCCTCTGGCCCTTGCCGTACGGG
GAGGGCACGAAAACCTGGTGTGCTCCTTGCTTCTTGGAGGGGCGAGCCCC
AGCGCCAAGGACAAAAAGGGAGATACGCCCCTGCATCTATCTGCTTGGCG
CGGACGTGCGGGGATCGCGAGCGCGCTGCTGCTCAAGGGCGCCCAGATGA
ATGCCCTCGATAGCCAGGGCCGGGGGAGGGCACGAAAACCTGGTGTGCTC
CTTGCTTCTTGGAGGGGCGAGCCCCAGCGCCAAGGACAAAAAGGGAGATA
CGCCCCTGCATCTATCTGCTTGGCGCGGACGTGCGGGGATCGCGAGCGCG
CTGCTGCTCAAGGGCGCCCAGATGAATGCCCTCGATAGCCAGGGCCGGAC
TCCGCTGATTGTAGCTGCCGAGCATGGCGCCCGTGGATCGACGGACGCCC
TGCTCATGGCCAACGCGGACACGGACGTTCGGTACGGAGAAAACGAGCTG
TCATCGCTTGACTCGGCTGCTTCGCACGGGCATATCAGTGTCTTGAAGGC
CTTGGTTCAGCACGGGGTGGACGTCAACGCCGTAGACTCTACCGGTTACA
CAGCGCTGCACATGACTCCGCTGATTGTAGCTGCCGAGCATGGCGCCCGT
GGATCGACGGACGCCCTGCTCATGGCCAACGCGGACACGGACGTTCGGTA
CGGAGAAAACGAGCTGTCATCGCTTGACTCGGCTGCTTCGCACGGGCATA
TCAGTGTCTTGAAGGCCTTGGTTCAGCACGGGGTGGACGTCAACGCCGTA
GACTCTACCGGTTACACAGCGCTGCACATGGCCGCGGACAACGACCAGTC
GGCGGCGGTGGACGTGCTCGTTGAGGCCGGTGCTAACATCGAGTCACCAG
ACATACATCAGTGGACACCTCTGCACTGTGCGGCCAGGCCGCGGACAACG
ACCAGTCGGCGGCGGTGGACGTGCTCGTTGAGGCCGGTGCTAACATCGAG
TCACCAGACATACATCAGTGGACACCTCTGCACTGTGCGGCCAGGTACAA
CAGCTGCTGCGACGTTGTGCTCGCACTCTTAAGGCGCGGGGCGAAGATCG
ACGCCCGCGAGTCTGCCGGGGAGCACCCGTTGCACGTTGCGTCTCAGTAC
CTCGCCGACAAAGTTGTGGACCTCCTTTTGAGGTACAACAGCTGCTGCGA
CGTTGTGCTCGCACTCTTAAGGCGCGGGGCGAAGATCGACGCCCGCGAGT
CTGCCGGGGAGCACCCGTTGCACGTTGCGTCTCAGTACCTCGCCGACAAA
GTTGTGGACCTCCTTTTGAGATGGGGTGCCGATGAAACCAAGACCAATGG
CGACGGCAACGTTCCAGATGGGGTGCCGATGAAACCAAGACCAATGGCGA
CGGCAACGTTCCAGCCGAGGTGATCGGGACATACGCTGCCGAGGAGGATA
CTCCCCTGTCGGAAGAGGAACGAGGGGAGGTGGAAGAACGCTTGCGACGT
CTGCTGGTGGGCGCCCCCTCCGACAGAGCCTGGCGCCGTCGCGGCTGGGT
CGTTCTCTGCCGCAATCGGGTGCTGCTCCACAATAGTCAACAGCAACAGG
AGTTGGCCCATTTGGAGGTGATCCGTAACCCCCACAACGGAGACGAGGGG
AAGGAAGACTCAGCCCTCAACGCTTGTAGTGGAAGCAAAAGCGTTGGCAG
CATCGGGGGAGAGTACCATGCCGTAAAGGTGCCAAGGACGGCGACGACAT
CGACGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGACAGGAGGAGTAGGA
GGACATAGGGTCGTCTCCACTTCTGTCACAACCTCACTTCTCGGACCCGA
GCCCCCCGAGGTGATCGGGACATACGCTGCCGAGGAGGATACTCCCCTGT
CGGAAGAGGAACGAGGGGAGGTGGAAGAACGCTTGCGACGTCTGCTGGTG
GGCGCCCCCTCCGACAGAGCCTGGCGCCGTCGCGGCTGGGTCGTTCTCTG
CCGCAATCGGGTGCTGCTCCACAATAGTCAACAGCAACAGGAGTTGGCCC
ATTTGGAGGTGATCCGTAACCCCCACAACGGAGACGAGGGGAAGGAAGAC
TCAGCCCTCAACGCTTGTAGTGGAAGCAAAAGCGTTGGCAGCATCGGGGG
AGAGTACCATGCCGTAAAGGTGCCAAGGACGGCGACGACATCGACGGCAG
GGGCAGGGGCAGGGGCAGGGGCAGGGACAGGAGGAGTAGGAGGACATAGG
GTCGTCTCCACTTCTGTCACAACCTCACTTCTCGGACCCGAGCCCCAAGA
CGACGAGAGCAATGGTGGCGGGAGAGAACCCCGCCGCAATTTTCCCAGTG
CAATCTACAGGCTGATGGGCCTGGCCGAGGAGGGAGTGTTCCGCGAGATA
GTGAGGTTTTTGTAGAAGACGACGAGAGCAATGGTGGCGGGAGAGAACCC
CGCCGCAATTTTCCCAGTGCAATCTACAGGCTGATGGGCCTGGCCGAGGA
GGGAGTGTTCCGCGAGATAGTGAGGTTTTTGTAG
back to top