mRNA_H-canaliculatus_F_contig12566.2156.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: D7FRF3_ECTSI (Multifunctional pyrimidine synthesis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF3_ECTSI) HSP 1 Score: 231 bits (588), Expect = 7.480e-68 Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 1
Query: 1 DNPNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
D+PNLRNLV+EVSLK+VRVFNPGM+ NIIAFDCGMKANIIRYFV EQKVTFTVVPFDYDLEANP+ V+YHGVFISNGPGDP MCT TI SLKWLMK+A DGE PVPIFGICLGNQLLALAAGAK
Sbjct: 7 DDPNLRNLVEEVSLKEVRVFNPGMETNIIAFDCGMKANIIRYFVTEQKVTFTVVPFDYDLEANPNNVEYHGVFISNGPGDPTMCTSTIKSLKWLMKKAADGEKPVPIFGICLGNQLLALAAGAK 130
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: A0A7S1BAC4_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAC4_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.320e-45 Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 1
Query: 7 PNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
PN RNLV EVS+K VRVF G N+IAFDCGMK NIIRYFV+ K+ TVVP+ YDLE NPS +DY+G+F+SNGPGDP MC T+ S+++ +K + P+PIFGICLGNQLLALA GAK
Sbjct: 328 PNKRNLVSEVSVKDVRVFGEGNSPNVIAFDCGMKYNIIRYFVEIHKIKLTVVPYYYDLETNPSNIDYNGIFLSNGPGDPTMCPETVKSIRYALKL----QPPIPIFGICLGNQLLALATGAK 445
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: W7U0U1_9STRA (Cad protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0U1_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.020e-43 Identity = 79/121 (65.29%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 7 PNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGA 369
PN NLV EVS K+VRV+ G I+AFDCGMK NIIRYFV+ V FTVVP+DYDL+ANPSK+++ G+FISNGPGDP MC TI SL+W M P PIFGICLGNQLLALAAG+
Sbjct: 249 PNKTNLVAEVSTKQVRVYGEGNRPRILAFDCGMKYNIIRYFVKHHAVEFTVVPYDYDLQANPSKLEWEGIFISNGPGDPTMCAATIKSLQWAMGL----PTPKPIFGICLGNQLLALAAGS 365
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: A0A7S2URU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URU4_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.350e-43 Identity = 79/124 (63.71%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 1 DNPNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
D+PN RNLV EVS K V+VF G +IIA+DCGMK NIIRY V+ KV TVVPFDYDLEANPS +++ G+F+SNGPGDP MC TI S+K+ + + P PIFGICLGNQLLALA GAK
Sbjct: 177 DDPNKRNLVAEVSTKTVKVFGEGNSPSIIAYDCGMKYNIIRYLVETHKVKLTVVPFDYDLEANPSNIEWSGMFLSNGPGDPTMCPDTIKSIKYALAL----DPPRPIFGICLGNQLLALACGAK 296
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: A0A7S2QW97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QW97_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.510e-43 Identity = 78/124 (62.90%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 1 DNPNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
D+PN RNLV EVS K+ V+N G IIA+DCGMK NIIRY +E V TVVPFDYDLEANPSK + G+F+SNGPGDPAMC T+ S+K + + P PIFGICLGNQLLAL+AGAK
Sbjct: 190 DDPNKRNLVAEVSTKEPVVYNKGASTKIIAYDCGMKYNIIRYLAREHNVELTVVPFDYDLEANPSKFVWDGLFLSNGPGDPAMCAATMKSIKHALSL----DPPKPIFGICLGNQLLALSAGAK 309
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: A0A836CIG0_9STRA (Multifunctional pyrimidine synthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIG0_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.190e-42 Identity = 79/124 (63.71%), Postives = 90/124 (72.58%), Query Frame = 1
Query: 4 NPNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVP-VPIFGICLGNQLLALAAGAK 372
NPN R+LV EVS +K V+ G I+AFDCGMK NIIR F ++ +V FTVVPFDYDLEAN + Y GVF+SNGPGDP C TINSLKWLM +VP +PIFGICLGNQLLALAAG
Sbjct: 128 NPNERHLVAEVSTRKTTVYGKGNATRILAFDCGMKYNIIRCFAEQCQVEFTVVPFDYDLEANVDGIQYDGVFVSNGPGDPVTCAQTINSLKWLM-----AQVPCIPIFGICLGNQLLALAAGGS 246
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: A0A7S2FGZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FGZ1_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.240e-41 Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 4 NPNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
NPN+ NLV EVS K+V+V+ G I+ +D G+K NIIRY VQ KV VVPF+Y LE NP K++Y G+F+SNGPGDPAMCT TI S+ W + R ++ E+ PIFGICLGNQ+L+LA+GAK
Sbjct: 179 NPNITNLVSEVSTKEVKVYGEGQRPRILVYDMGIKNNIIRYLVQVNKVCCIVVPFEYPLEENPEKIEYEGLFLSNGPGDPAMCTTTIASVNWAISRPKE-EIK-PIFGICLGNQILSLASGAK 299
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: B8C8T5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8T5_THAPS) HSP 1 Score: 155 bits (393), Expect = 1.450e-41 Identity = 76/122 (62.30%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 7 PNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
PN RNLV EVS K V V+ NI+A+DCGMK NIIRYFV KV TVVPFDYDLEANP+ + + G+F+SNGPGDP MC TI S+++ + + P PIFGICLGNQLLALAAGAK
Sbjct: 172 PNKRNLVAEVSTKTVTVYGDSNTTNIVAYDCGMKFNIIRYFVNTHKVRLTVVPFDYDLEANPANIPWDGLFLSNGPGDPTMCPQTIKSIQYALAL----DPPRPIFGICLGNQLLALAAGAK 289
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: A0A8J2SSL2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSL2_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.700e-41 Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 7 PNLRNLVQEVSLKKVRVFNPGMDV-NIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
PNLRNLV EVS K +R +N G D I+A DCGMK NI+RYFV+ VT VVPFDYDLE NP+ + + G+F SNGPGDP+ C TI SL+W + R VPIFGICLGNQLLALAAGAK
Sbjct: 208 PNLRNLVAEVSTKSIRTYNQGGDKPTIVAIDCGMKHNIVRYFVETHDVTLIVVPFDYDLEKNPANLKWDGLFCSNGPGDPSQCRETIKSLQWAISR------DVPIFGICLGNQLLALAAGAK 324
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Match: K0TB25_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TB25_THAOC) HSP 1 Score: 154 bits (389), Expect = 5.010e-41 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 7 PNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTFTVVPFDYDLEANPSKVDYHGVFISNGPGDPAMCTPTINSLKWLMKRAEDGEVPVPIFGICLGNQLLALAAGAK 372
PN RNLV EVS K V V+ +I+A+DCGMK NIIRYFV E V TVVPFDYDLEANPS + + G+F+SNGPGDP MC TI S+K+ + + P PIFGICLGNQLL++AAGAK
Sbjct: 38 PNKRNLVSEVSTKSVTVYGESNTTSILAYDCGMKFNIIRYFVDEHNVKLTVVPFDYDLEANPSNIQWDGLFLSNGPGDPNMCPQTIKSIKYAIGL----DPPRPIFGICLGNQLLSIAAGAK 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12566.2156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12566.2156.1 >prot_H-canaliculatus_F_contig12566.2156.1 ID=prot_H-canaliculatus_F_contig12566.2156.1|Name=mRNA_H-canaliculatus_F_contig12566.2156.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=124bp DNPNLRNLVQEVSLKKVRVFNPGMDVNIIAFDCGMKANIIRYFVQEQKVTback to top mRNA from alignment at H-canaliculatus_F_contig12566:809..2027+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12566.2156.1 ID=mRNA_H-canaliculatus_F_contig12566.2156.1|Name=mRNA_H-canaliculatus_F_contig12566.2156.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1219bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12566:809..2027+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12566:809..2027+ >mRNA_H-canaliculatus_F_contig12566.2156.1 ID=mRNA_H-canaliculatus_F_contig12566.2156.1|Name=mRNA_H-canaliculatus_F_contig12566.2156.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=744bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12566:809..2027+ (Hapterophycus canaliculatus Oshoro5f female)back to top |