mRNA_H-canaliculatus_F_contig1256.2152.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: A0A6H5J6R4_9PHAE (NAC-A/B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6R4_9PHAE) HSP 1 Score: 181 bits (458), Expect = 5.380e-48 Identity = 107/169 (63.31%), Postives = 126/169 (74.56%), Query Frame = 2
Query: 197 PSAQMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRV-APARATVSSRASARPDPSAVEIDAVAAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLTDTVGAGGAGVS 700
P A MNRAERKSRQA+EKLGLRAVKGVFRMT++T+NGVVFVVK PDVF+ PR+ +YVVFG+AETD SGSEVR P P + P V AP + + ++RPDP AVE D+++AGLDPADVLT+V+Q C AAI ALRQADGDV+NAVM LT GG G S
Sbjct: 682 PLAHMNRAERKSRQAVEKLGLRAVKGVFRMTIRTTNGVVFVVKGPDVFRHPRQESYVVFGSAETDGSGSEVRASRP---PQSFVPPAIAVGAPPKVAGAVVPASRPDPLAVESDSISAGLDPADVLTLVSQVGCDSKAAIVALRQADGDVINAVMDLTFASSGGGDGAS 847
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: D7FI48_ECTSI (Nascent polypeptide associated complex alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI48_ECTSI) HSP 1 Score: 179 bits (454), Expect = 1.120e-47 Identity = 102/157 (64.97%), Postives = 120/157 (76.43%), Query Frame = 2
Query: 197 PSAQMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASARPDPSAVEIDAVAAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLT 667
P A MNRAERKSRQA+EKLGLRAVKGVFRMT++T+NGVVFVVKAPDVF+ PR+ TYVVFG+AETD SGSEVR P P V P + + ++RPDP AVE D+++AGLDPADVLT+V+Q C AAI ALRQADGDV+NAV+ LT
Sbjct: 599 PLAHMNRAERKSRQAVEKLGLRAVKGVFRMTMRTTNGVVFVVKAPDVFRHPRQETYVVFGSAETDGSGSEVRASRP---------PRSFVPPPKKAAAVVPASRPDPLAVESDSISAGLDPADVLTLVSQVGCDSQAAIVALRQADGDVINAVLDLT 746
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: A0A7S1B8E0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8E0_9STRA) HSP 1 Score: 102 bits (254), Expect = 9.600e-23 Identity = 67/161 (41.61%), Postives = 100/161 (62.11%), Query Frame = 2
Query: 197 PSAQMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETD--RSGSEVRPPSPKRGPT-AHAQPNGRVAPARATVSSRASARPDPSAVEIDAV-AAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLT 667
P ++ NR+E+KSR+AM+KLG+R V GV R+TVK S V+FV+ PDVFK P +TYVVFG A+++ +G++ R A A+ R A A S + + E +A+ +G++P D+ V++QA CS A+ ALR+ D D+VN++MSLT
Sbjct: 37 PGSKQNRSEKKSRKAMQKLGMRPVPGVVRVTVKKSKSVLFVISNPDVFKSPNSDTYVVFGEAKSEDLNAGAQAHAAKQFRSQAGAGAEALHRAAAGTAATPSVEAISEEAGEEEEEALDESGVEPKDIELVMSQAGCSRAKAVKALRENDNDLVNSIMSLT 197
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: A0A024USI3_9STRA (NAC-A/B domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USI3_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.360e-22 Identity = 63/153 (41.18%), Postives = 90/153 (58.82%), Query Frame = 2
Query: 209 MNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASARPDPSAVEIDAVAAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLT 667
+NRAE K+R+AM+KLGL+ V G+ R T+K S GV+FV+ PDVFK TYV+FG A+ + + ++ + P Q + APA T + A D E+D +G+DP D+ V+TQ+ S A+ AL+ D DVVNA+M LT
Sbjct: 18 LNRAESKARKAMQKLGLKQVNGIIRATIKKSQGVLFVISKPDVFKSSASETYVIFGEAKIEDTNNQPQVP----------QFDQEEAPAAETKAVAA----DDDETEVDE--SGVDPKDIQLVMTQSNVSRAKAVAALKSNDNDVVNAIMELT 154
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: M1CPW0_SOLTU (Nascent polypeptide associated complex alpha n=2 Tax=Solanum TaxID=4107 RepID=M1CPW0_SOLTU) HSP 1 Score: 99.8 bits (247), Expect = 1.050e-21 Identity = 60/158 (37.97%), Postives = 97/158 (61.39%), Query Frame = 2
Query: 206 QMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASARPDPSAV---EIDAVAAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLTD 670
+ +R+E+KSR+AM KLG++ + GV R+TVK S ++FV+ PDVFK P +TYV+FG A+ + S+++ + ++ +A S ++P+PS V + D AG++P D+ V+TQA S A+ ALR ADGD+V+A+M +T+
Sbjct: 57 KQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQSQAAEQ--------------FKAPNLSNVISKPEPSTVAQDDEDVDEAGVEPKDIELVMTQAGVSRAKAVKALRAADGDIVSAIMEITN 200
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: A0A6U2NW63_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2NW63_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.320e-21 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 2
Query: 206 QMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASARPDPSAVEIDAVAA----GLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLT 667
+ NRAE+K+R+AM+KLG+R V GV R+TVK S V+FV++ PDVFK P + YVVFG A+++ ++ + A A RV P A A+A P AV DA A G++ D+ V++QA CS A+ AL++ DGD+VN++MSLT
Sbjct: 40 KQNRAEKKARKAMQKLGMRPVPGVMRVTVKKSKNVLFVIQKPDVFKSPNADAYVVFGEAKSEDLSAQNQ---------AQAAKQFRVPPTEAA----AAAAP---AVAEDADEALDETGVEAKDIELVMSQAGCSRARAVKALKENDGDLVNSIMSLT 181
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: J3L7P7_ORYBR (NAC-A/B domain-containing protein n=12 Tax=Poaceae TaxID=4479 RepID=J3L7P7_ORYBR) HSP 1 Score: 99.4 bits (246), Expect = 1.540e-21 Identity = 59/160 (36.88%), Postives = 97/160 (60.62%), Query Frame = 2
Query: 206 QMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASARPDPSAV-----EIDAVAAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLTD 670
+ +R+E+KSR+AM+KLG++ + GV R+T+K S ++FV+ PDVFK P +TYV+FG A+ + S+++ + ++ +A S ++P+PSA E+D G++P D+ V+TQA S A+ AL+ ADGD+V A+M LT+
Sbjct: 59 KQSRSEKKSRKAMQKLGMKTITGVSRVTIKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAEQ--------------FKAPDLSNVISKPEPSAAAQDDEEVDET--GVEPKDIELVMTQATVSRSRAVKALKAADGDIVTAIMELTN 202
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: A0A7S2SI79_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SI79_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.480e-21 Identity = 63/154 (40.91%), Postives = 92/154 (59.74%), Query Frame = 2
Query: 212 NRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASAR-PDPSAVEIDAV-AAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLT 667
NRAE+KSR+ M+K+ +R V GV R+TVK S V+FV+ PDV+K +TYVVFG A+++ G+ + + PA V A A P+ +A DAV G++P D+ V++QA CS A+ AL++ DGD+VN++MSLT
Sbjct: 40 NRAEKKSRKMMQKMNMRPVPGVLRVTVKKSKNVLFVISKPDVYKSTNSDTYVVFGEAKSEDLGAAASQAAAAKQFRQPQAAGAAAVPAAPAVEELAEADIPELAAATEDAVDETGIEPKDIELVMSQAGCSRAKAVKALKENDGDLVNSIMSLT 193
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: UPI001F5DBC2A (nascent polypeptide-associated complex subunit alpha-like protein 1 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DBC2A) HSP 1 Score: 98.6 bits (244), Expect = 3.070e-21 Identity = 63/162 (38.89%), Postives = 100/162 (61.73%), Query Frame = 2
Query: 185 GPCSPSAQMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASARPDPSAVEIDAVAAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLTD 670
G S ++ +R+E+KSR+AM+KLG++A+ GV R+TVK S V+FV+ PDVFK P +TYV+FG A+ + ++++ + ++ P GR P++ S A+A+ D E G+D D+ V+TQA A+ AL+ ADGD+V+A+M LT+
Sbjct: 52 GDASGKSKQSRSEKKSRKAMQKLGMKAITGVSRVTVKKSKTVMFVISKPDVFKSPHSDTYVIFGEAKIEDMSNQLQTQAAEQ----FKAPGGRGGPSKGEPSV-AAAQDDEDEDET-----GVDKKDIDLVMTQASVPRSRAVKALKAADGDIVSAIMELTN 203
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Match: D7FUX7_ECTSI (NAC-A/B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUX7_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 4.720e-21 Identity = 57/154 (37.01%), Postives = 94/154 (61.04%), Query Frame = 2
Query: 206 QMNRAERKSRQAMEKLGLRAVKGVFRMTVKTSNGVVFVVKAPDVFKQPRKNTYVVFGTAETDRSGSEVRPPSPKRGPTAHAQPNGRVAPARATVSSRASARPDPSAVEIDAVAAGLDPADVLTVVTQAECSPGAAIGALRQADGDVVNAVMSLT 667
+ NR E+K+R+A++KLG++AV + R+TVK S ++FV+ PDV K P NTYV+FG A+ + ++ + + +R + P A A A + A D + +D G++P D+ +++QA C+ AA+ AL++ DGD+VNA+M LT
Sbjct: 45 KQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAER----FSAPEAAAASAAAIPAVNTGADVDTDEL-VDET--GVEPKDIELIMSQASCTRSAAVNALKKNDGDIVNAIMELT 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1256.2152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1256.2152.1 >prot_H-canaliculatus_F_contig1256.2152.1 ID=prot_H-canaliculatus_F_contig1256.2152.1|Name=mRNA_H-canaliculatus_F_contig1256.2152.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=209bp MLVSGSKAAAPNGAASQREKDSATAEKIAAPSSGPCSPSAQMNRAERKSRback to top mRNA from alignment at H-canaliculatus_F_contig1256:2569..4242+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1256.2152.1 ID=mRNA_H-canaliculatus_F_contig1256.2152.1|Name=mRNA_H-canaliculatus_F_contig1256.2152.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1674bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1256:2569..4242+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1256:2569..4242+ >mRNA_H-canaliculatus_F_contig1256.2152.1 ID=mRNA_H-canaliculatus_F_contig1256.2152.1|Name=mRNA_H-canaliculatus_F_contig1256.2152.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1254bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1256:2569..4242+ (Hapterophycus canaliculatus Oshoro5f female)back to top |