mRNA_H-canaliculatus_F_contig12543.2145.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12543.2145.1
Unique NamemRNA_H-canaliculatus_F_contig12543.2145.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A6H5KHW9_9PHAE (ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHW9_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 9.470e-118
Identity = 183/207 (88.41%), Postives = 193/207 (93.24%), Query Frame = 1 
Query:    1 LVSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAADMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDAAPVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            LVSS+RQSLPPDVDKWGVSLQLLMGAVV GG+VVAGCY WMQ+NVITDPECVDA+ AA MKETTSLTLRESA FL  N YLRDVA+LVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFS+TTGLVTLGMMLLG QVFKNYGWG+AAKATPVVLLVTGV FFSLS+FGDA+PVQ ML ALST+PL LAVLAG AQNVLSKSCK
Sbjct:  397 LVSSIRQSLPPDVDKWGVSLQLLMGAVVTGGLVVAGCYRWMQENVITDPECVDAASAACMKETTSLTLRESAAFLGSNDYLRDVAILVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSSTTGLVTLGMMLLGGQVFKNYGWGTAAKATPVVLLVTGVGFFSLSIFGDASPVQEMLGALSTNPLTLAVLAGAAQNVLSKSCK 603
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: W7TSX0_9STRA (ADP,ATP carrier protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSX0_9STRA)

HSP 1 Score: 245 bits (625), Expect = 6.450e-75
Identity = 134/209 (64.11%), Postives = 158/209 (75.60%), Query Frame = 1 
Query:    4 VSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRA--ADMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLF-GDAAPVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            VSS+R+ LP  VDKWGVSL+LLMGAVV  G V+ G Y  MQ+NV+TDPEC  A +   +  K  TS++L+ESA +L  + Y+RD+A LVIAYG SINIVEVTWK KLK A+PDPN YSAFMGNFST TG VTL MMLLGR +F+ YGWG AA  TP++LL TGVAFFSL +F G  +PV A   AL  +PLMLAV+ G AQNVLSKS K
Sbjct:  277 VSSIRKQLPDGVDKWGVSLKLLMGAVVSLGAVMVGAYTHMQRNVLTDPECYSAEKQKKSSKKSATSMSLKESAQYLFNSKYIRDLATLVIAYGMSINIVEVTWKGKLKEAFPDPNAYSAFMGNFSTATGCVTLIMMLLGRGIFQKYGWGVAALITPIMLLSTGVAFFSLIIFNGFFSPVTA---ALGMTPLMLAVIIGAAQNVLSKSSK 482
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BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A6V1LEJ0_HETAK (ADP,ATP carrier protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LEJ0_HETAK)

HSP 1 Score: 241 bits (614), Expect = 1.650e-73
Identity = 124/207 (59.90%), Postives = 155/207 (74.88%), Query Frame = 1 
Query:    1 LVSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAADMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDAAPVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            LVS +R+ +P  VDKWGVSL+LL GAVV+ G+ + G +  MQ+NV+TDPECV   R    K +TS++L ESA +LA + Y+R +A+LVI+YG SINIVEVTWK KLK  YPDPN YSAFMGNFST TG +TL MM+LGR +F+ +GWG+AA  TP VL +TG  FFSL LFGD    + +L AL T+PL  AV+AG AQN+LSKS K
Sbjct:  258 LVSKLREGMPEGVDKWGVSLKLLTGAVVLFGLCICGIFNHMQKNVVTDPECVSELRKPKSKASTSMSLGESAKYLASSPYIRYLALLVISYGMSINIVEVTWKGKLKAQYPDPNGYSAFMGNFSTATGTITLFMMILGRFIFQKFGWGTAALVTPTVLFITGGLFFSLILFGDF--FKPLLDALGTTPLFAAVIAGAAQNILSKSSK 462
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BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: E6Y2N7_EUGGR (ADP,ATP carrier protein (Fragment) n=1 Tax=Euglena gracilis TaxID=3039 RepID=E6Y2N7_EUGGR)

HSP 1 Score: 234 bits (596), Expect = 2.500e-71
Identity = 120/210 (57.14%), Postives = 157/210 (74.76%), Query Frame = 1 
Query:    1 LVSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAADMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSL---FGDAAPVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            +VS +R++LPP VD WG SL+LL+  ++V GVV+ GC+ ++Q++VI DP CVD S+    K+ T LT++ESA FL  ++Y+RD+A+LVI YG SINIVEVTWK+KLK  +PDPN YSAFMGNFS+ TG VTL MM+LGRQ+F+ +GWG AA  TP+ L VTG  FFSL L   F +  P+ A   A+ T+PLMLAVL G  QN++SKS K
Sbjct:  202 IVSKLRENLPPGVDPWGFSLKLLVAGILVSGVVMTGCFLYIQKSVIPDPSCVDPSQQRQSKQKTKLTMKESAQFLMRSTYIRDLALLVICYGMSINIVEVTWKSKLKAQFPDPNSYSAFMGNFSSATGTVTLVMMILGRQIFEKFGWGVAASITPITLGVTGAMFFSLILAPSFWN--PITA---AIGTTPLMLAVLIGAFQNIMSKSAK 406
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BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A7S2UG60_9STRA (ADP,ATP carrier protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG60_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.150e-69
Identity = 122/209 (58.37%), Postives = 153/209 (73.21%), Query Frame = 1 
Query:    4 VSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAADMKETTSLT--LRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDA-APVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            VS +R +LPP VD WGVSL+ LM AV+  G V+ G + +MQ+NV+TDP CVD  + A  K+ T +   LRESA FL  + Y+RD+A+LVI+YG  INIVEV+WKAKLK A+P PNDYS+FMGNFS+ TG VTL MMLLGR +F+ +GW  AA  TP ++ VTG+AFF L++F     PV A   AL T+PLMLAVL G AQN+LSKS K
Sbjct:  199 VSKMRDNLPPGVDPWGVSLKYLMSAVIASGGVMLGTFSYMQRNVMTDPNCVDQEKQAARKKKTKVKMGLRESAKFLGKSPYIRDLALLVISYGMCINIVEVSWKAKLKQAFPSPNDYSSFMGNFSSATGAVTLIMMLLGRTIFEKFGWRIAALVTPTMIGVTGLAFFGLNIFAPTFVPVAA---ALGTTPLMLAVLVGAAQNILSKSSK 404
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A2V3J1K2_9FLOR (ADP,ATP carrier protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1K2_9FLOR)

HSP 1 Score: 230 bits (586), Expect = 1.640e-68
Identity = 116/206 (56.31%), Postives = 149/206 (72.33%), Query Frame = 1 
Query:    4 VSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAADMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDAAPVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            VS +R  LPP VD W +SL+ LM  + VGG+V+ GCY +MQ+ V+TDP+     +A   K+ T L L ESA +L  + Y+RD+A LVIAYG SINIVEVTWK++L+ AYPDPN YS FMGNFST TG+VT  MML+GR +F+ +GWG+AA  TP+VL VTG+ FFSL LF D   V   + A+ T+PL+ AV+ G AQN+LSKS K
Sbjct:  339 VSDIRAKLPPGVDGWALSLKYLMSMIGVGGLVIIGCYYYMQRKVLTDPKLFSPRKAKSSKQKTKLGLVESAKYLGQSKYIRDLATLVIAYGMSINIVEVTWKSRLRAAYPDPNAYSTFMGNFSTCTGIVTFIMMLVGRFIFRKFGWGAAAVVTPLVLGVTGIMFFSLILFADT--VSPFIAAIGTTPLIAAVMIGAAQNILSKSSK 542
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BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A7S1ZGB0_TRICV (ADP,ATP carrier protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZGB0_TRICV)

HSP 1 Score: 228 bits (581), Expect = 2.480e-68
Identity = 120/209 (57.42%), Postives = 151/209 (72.25%), Query Frame = 1 
Query:    4 VSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAADM--KETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDA-APVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            VS +R++L P +D WGVSL+ LMGAVV  G ++   + WMQ+NV+TDP CVD  + A    K+   + LRESA FL  + Y+RD+A LVI+YG  INIVEV+WKAKLK AYPDPN YS+FMGNFS+ TG VTL MMLLGR +F+ +GW  AA  TP ++ VTG+ FF+L++F     PV A   AL T+PLMLAVL G AQN+LSKS K
Sbjct:  290 VSMMRENLAPGIDPWGVSLKYLMGAVVASGGLMLSTFAWMQKNVLTDPNCVDQEKRAQKQKKKRVKMGLRESAKFLMKSPYIRDLATLVISYGMCINIVEVSWKAKLKQAYPDPNAYSSFMGNFSSATGAVTLVMMLLGRSIFQKFGWRKAALVTPTMIGVTGLGFFALNIFAPTFVPVAA---ALGTTPLMLAVLVGAAQNILSKSSK 495
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BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A7S3PXV0_9STRA (ADP,ATP carrier protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXV0_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.080e-68
Identity = 120/209 (57.42%), Postives = 152/209 (72.73%), Query Frame = 1 
Query:    4 VSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAA--DMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDA-APVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            VS +R  LPP VD WGVSL+ LMGAVV GG  + G ++ MQ NV+TDP CVD  + A    K+ T ++++ESA FL  + Y+RD+A+LVI+YG  INIVEV+WKAKLK A+P+PNDYS FMGNFS+ TG VTL MML+GR +F+ +GW  AA  TP ++ VTG AFF L LF  A  P+ A   +L T+PLML+VL G AQN+LSKS K
Sbjct:  268 VSQMRGRLPPGVDAWGVSLKYLMGAVVAGGGAMLGLFKHMQDNVMTDPACVDQEKQALKKSKKKTKMSMKESAQFLMKSPYIRDLAILVISYGMCINIVEVSWKAKLKAAFPNPNDYSMFMGNFSSCTGAVTLFMMLIGRTIFQKFGWRKAALVTPTMIGVTGAAFFGLQLFAPAFVPIAA---SLGTTPLMLSVLVGAAQNILSKSSK 473
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A7S0SWF8_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWF8_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.620e-67
Identity = 120/208 (57.69%), Postives = 153/208 (73.56%), Query Frame = 1 
Query:    4 VSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVDASRAADMKET-TSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDA-APVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            VSS+R ++    D WG+SL+ LM AVV GG +V     +MQ+ V+TDPECVD ++ A  K+T T +T+ ES  FL+ ++Y+RD+ +LV+ YG SINIVEVTWK+KLK A+PDPN YS FMGNFS+ TG+VTL MMLLGR VFK +GWG AA  TP+ LL TG+AFFSL+LF +  AP+ A L    T+PLMLAV  G AQN+LSK  K
Sbjct:  261 VSSLRSTVGSAADIWGLSLKYLMAAVVAGGGLVMALMTFMQKKVLTDPECVDPTKEAKRKKTKTKMTMGESISFLSKSTYIRDLFILVVGYGMSINIVEVTWKSKLKAAFPDPNSYSTFMGNFSSATGVVTLIMMLLGRIVFKKFGWGVAALITPITLLTTGIAFFSLTLFPNFFAPITAQL---GTTPLMLAVFIGAAQNILSKGAK 465
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BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Match: A0A7S0CBZ6_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBZ6_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.750e-66
Identity = 115/208 (55.29%), Postives = 154/208 (74.04%), Query Frame = 1 
Query:    4 VSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPECVD-ASRAADMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEVTWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSAAKATPVVLLVTGVAFFSLSLFGDA-APVQAMLVALSTSPLMLAVLAGGAQNVLSKSCK 621
            VS +R +L P VD WG+SL+ LMGAV+  G  + G + +MQ+NV+TDP CVD A+RA   K+   +++++S  FL  + Y+R++A LVI+YG  INIVEVTWK+KLK+A+P+PNDYSAFMGNFS+ TG VTL MML+GR +F+ +GW  AA  TP ++ VTG+AFF+L++F     PV     AL T+PLMLAVL G AQN+LSKS K
Sbjct:  298 VSKMRANLAPGVDAWGMSLKYLMGAVMASGGALIGIFSYMQRNVLTDPACVDVAARAKPKKKKVKMSMKDSFKFLVDSPYIRNLATLVISYGMCINIVEVTWKSKLKLAFPNPNDYSAFMGNFSSVTGAVTLVMMLIGRTIFQKFGWRVAALVTPTMIAVTGLAFFALNIFAPTFVPVA---TALGTTPLMLAVLIGAAQNILSKSSK 502
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12543.2145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHW9_9PHAE9.470e-11888.41ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TSX0_9STRA6.450e-7564.11ADP,ATP carrier protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6V1LEJ0_HETAK1.650e-7359.90ADP,ATP carrier protein n=1 Tax=Heterosigma akashi... [more]
E6Y2N7_EUGGR2.500e-7157.14ADP,ATP carrier protein (Fragment) n=1 Tax=Euglena... [more]
A0A7S2UG60_9STRA1.150e-6958.37ADP,ATP carrier protein n=1 Tax=Attheya septentrio... [more]
A0A2V3J1K2_9FLOR1.640e-6856.31ADP,ATP carrier protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1ZGB0_TRICV2.480e-6857.42ADP,ATP carrier protein n=2 Tax=Trieres chinensis ... [more]
A0A7S3PXV0_9STRA3.080e-6857.42ADP,ATP carrier protein n=1 Tax=Chaetoceros debili... [more]
A0A7S0SWF8_9STRA1.620e-6757.69ADP,ATP carrier protein (Fragment) n=1 Tax=Chromul... [more]
A0A7S0CBZ6_9STRA1.750e-6655.29ADP,ATP carrier protein (Fragment) n=1 Tax=Probosc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12543contigH-canaliculatus_F_contig12543:293..3502 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.4
Seed ortholog evalue1.1e-96
Seed eggNOG ortholog2880.D7FNV6
Preferred nameNTT1
KEGG koko:K03301
KEGG TC2.A.12
GOsGO:0000295,GO:0003674,GO:0005215,GO:0005346,GO:0005347,GO:0005471,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006862,GO:0008150,GO:0008509,GO:0008514,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0015075,GO:0015215,GO:0015216,GO:0015217,GO:0015238,GO:0015291,GO:0015297,GO:0015301,GO:0015605,GO:0015711,GO:0015748,GO:0015865,GO:0015866,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0022804,GO:0022857,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0034220,GO:0042170,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051503,GO:0055085,GO:0071702,GO:0071705,GO:0098656,GO:0099516,GO:1901264,GO:1901505,GO:1901679
EggNOG free text desc.ATP:ADP antiporter activity
EggNOG OGs2QSRY@2759,COG3202@1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionplastidic ATP/ADP transporter
Ec32 orthologEc-12_003210.1
Exons5
Model size624
Cds size624
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12543.2145.1prot_H-canaliculatus_F_contig12543.2145.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12543 293..3502 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928969.8976521-CDS-H-canaliculatus_F_contig12543:292..4591622928969.8976521-CDS-H-canaliculatus_F_contig12543:292..459Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 293..459 +
1696845634.3230689-CDS-H-canaliculatus_F_contig12543:292..4591696845634.3230689-CDS-H-canaliculatus_F_contig12543:292..459Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 293..459 +
1622928969.9383132-CDS-H-canaliculatus_F_contig12543:1074..12051622928969.9383132-CDS-H-canaliculatus_F_contig12543:1074..1205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 1075..1205 +
1696845634.337419-CDS-H-canaliculatus_F_contig12543:1074..12051696845634.337419-CDS-H-canaliculatus_F_contig12543:1074..1205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 1075..1205 +
1622928969.9595633-CDS-H-canaliculatus_F_contig12543:1754..18161622928969.9595633-CDS-H-canaliculatus_F_contig12543:1754..1816Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 1755..1816 +
1696845634.3473282-CDS-H-canaliculatus_F_contig12543:1754..18161696845634.3473282-CDS-H-canaliculatus_F_contig12543:1754..1816Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 1755..1816 +
1622928969.9884899-CDS-H-canaliculatus_F_contig12543:2081..22071622928969.9884899-CDS-H-canaliculatus_F_contig12543:2081..2207Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 2082..2207 +
1696845634.3611133-CDS-H-canaliculatus_F_contig12543:2081..22071696845634.3611133-CDS-H-canaliculatus_F_contig12543:2081..2207Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 2082..2207 +
1622928970.0060337-CDS-H-canaliculatus_F_contig12543:3364..35021622928970.0060337-CDS-H-canaliculatus_F_contig12543:3364..3502Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 3365..3502 +
1696845634.370729-CDS-H-canaliculatus_F_contig12543:3364..35021696845634.370729-CDS-H-canaliculatus_F_contig12543:3364..3502Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12543 3365..3502 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12543.2145.1

>prot_H-canaliculatus_F_contig12543.2145.1 ID=prot_H-canaliculatus_F_contig12543.2145.1|Name=mRNA_H-canaliculatus_F_contig12543.2145.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=208bp
LVSSVRQSLPPDVDKWGVSLQLLMGAVVVGGVVVAGCYEWMQQNVITDPE
CVDASRAADMKETTSLTLRESAVFLAGNSYLRDVAVLVIAYGTSINIVEV
TWKAKLKMAYPDPNDYSAFMGNFSTTTGLVTLGMMLLGRQVFKNYGWGSA
AKATPVVLLVTGVAFFSLSLFGDAAPVQAMLVALSTSPLMLAVLAGGAQN
VLSKSCK*
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mRNA from alignment at H-canaliculatus_F_contig12543:293..3502+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12543.2145.1 ID=mRNA_H-canaliculatus_F_contig12543.2145.1|Name=mRNA_H-canaliculatus_F_contig12543.2145.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3210bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12543:293..3502+ (Hapterophycus canaliculatus Oshoro5f female)
CTGGTCTCGTCCGTCCGGCAGTCCCTGCCCCCCGACGTGGACAAGTGGGG
AGTGTCTCTGCAGCTACTCATGGGCGCGGTCGTGGTGGGGGGTGTCGTGG
TCGCCGGCTGCTATGAGTGGATGCAGCAGAACGTCATCACGGACCCGGAG
TGCGTCGATGCCAGCAGGTACGACCCGGTGCGGCGCGGTGAAGTGCGGTG
CGGTGCCGAGTGGCTTTATTCGCCATCGTCGGGCGGCCTGTGCTGCGGAT
GGCGGTGGTGCTTTCGCTTGATGGCGGCAGCTTCTCGCCGGCAGTTTTGT
TTCGCGCACTGCTTCTCCTTTTTTTCTTTTTTTCCCATGCTTGACTTGCC
TGTGGTGTTGTCGACCGTGCTGATTTTGCCGAGTTCGTCTTCGGTGGTAT
TGCTTCTAAGGCTGCTGCTTGTTGCCGTTGTGGCTGTTGTGTTGTGATTA
CCTGTGCCGATGTTGCAATCCCCCGGGCAGCTGTTTGTGTTAGTATTAGT
GGTGCTTTTCGGTGTGCGTTGTTGCTCTTGTCACCTTCGCCGTCGTCGCT
CCTATTTCCTCTGCTTTTTTCCTACCATTTTGCTATCACCGATGCTCCCG
TTTTCGTCGCTCTCGCACTACCGATCTTGGCGGGTTTCTCGCAGGTTCTC
CTTTTGGCACTCTTGATCCTCTTGATCCTTTTGATCCTCGCTCCCTTTCC
TTTCTCGGTGGTGGTGGTGCCGATGCTGCTGTGCCCCCCCACCCCCCCCC
CCCCATCCTCAATCTCTCCATTCGGAGCGCAGAGCCGCGGACATGAAGGA
GACGACCAGCCTCACGCTTAGGGAGAGCGCGGTGTTTCTGGCCGGGAACT
CTTATCTTCGGGATGTGGCTGTCCTCGTCATAGCCTACGGCACGAGCATC
AACATCGTCGAAGGTGAGTAGGAGAGGAGGCGAGGGGCGAGAGGCGGGAC
GGACAGAAAGTAGCAGACCCTCTCTTTTCATGGTGTCCAGGGAAGGTTGA
GTGCTCTTCCCACCTCTGTCGAGGCCTGCCTCTTGTTGCGCACGGTGTTG
CGAGGCGATCCGCACAGATTGGTGGCGAGGAGCACGAAGTCTTTTTGGCG
CTTTGTGGAAGGCGTGTCTCTGCGGCAACGGCAATAGCAGCAGCAGCGTC
TCATTCGTGAGAAGCAATCGACAAGTCCATGAGAGATGGCACACAGCTAC
ACCTATCCCCCTCACACCGACACTTCTGTGTATGCCTGGGTTGAGAATAT
CCCTTCGGCTCATTTTCATCCCATGCCTGCGCGAAAATTATGAGTCTCTT
GTTTCCTCTCCTTGGTCCCGAAACCCAGATTCCTGAAGCCACTTACTCCC
CCCGCCCTTCTTCTGCGCGCCAGCACATCTGCTGCTTTTTGTTTTCTCTC
TAACCTCCCCCCTCACCCCTCTCCGTCTTTCTCTCCTCCATCCATCCATA
TTCCGTTGGAAGTCACGTGGAAGGCGAAGCTGAAGATGGCGTACCCAGAC
CCGAACGACTACTCCGCTTTCATGGTGAGGCATCATGCTGCTCCACACAC
ACGCACACACACGCGCACACACACGGAATCCGTTCCTCCTTGAGCGGAAT
GCCATTCGCTTCGCCTCCTCGTCTCTCTATGTCAAGCCTGAACAGCCCGC
AAAGTGTCACCTATCCCTGGCACGATCCAATCGTGTTTTGGGCAAGGGGG
CGCCGCTCACCCACCCGACCGCAACCGCCCCGCAACACCACACCAAAAAT
ATATATATATGTACATATGGCGAACCAAAAAACACGCAGGGAAATTTCTC
GACCACAACGGGGCTGGTCACCTTGGGCATGATGCTGCTGGGCAGGCAGG
TGTTCAAGAACTACGGGTGGGGCAGCGCAGCTAAGGCGACGCCGGTGGTG
CTTCTCGTTACAGGGGTGAGCGAGAGATAAAGACGCGGGGGCGAGGAGAG
AAACAACCAGCGGAGACCGGTGAAGGGGCCCCGCACGATTTGGTGTGATG
CAGCGTGGATCGCGAGGGCAGGACCAAGCGCGGAAGCGTTTGTGTGGGCC
ACGTGCACGTGGTCGCGCCATTGTTGTTGCTGTCGTTGCGTTGATGCTGC
TCTTGCGGTTGATTTTTGATTTGTTTGTTCTCTTTCCTTGCCGCAACCGT
CGATATTGTCCTCCCAAAAAACAAAAATTAATTAATAATGATCACCCAAA
TTATCATTGAAGGCTCCTGGAGAAGTACATGTACTTTCTTCCGTACTTCT
CTCGCCCCCTCATCCCCTTTCAAGTATAAGCCCATCCAGGTCACTAACTA
GCGCTCCACAGGAAGTTTTCCCACAGGTTTGTCTGCAATCTTTCTTTTAT
TACACCAGGCACAATCGAAGGTGCTATACTGTCTCTCGTGCGAGGTCTGC
GTAGTACATAAGCGATCTGCTTGCATGAGCAGACACACCTAGCCAGGGAT
TGCTCTCGCTCACCGGGTAAAAGAGGGACGAAGAGACGGGGCAGAGGGCG
AAAGCAAGCAGGAGACGAACACGTTACCCCGAAACGAGTCGTCTACACGA
CCATTCTGCGCAGGCGCGAGAAAAACGAAAATGAGCACATGAGCGTGTGC
CACAAGTGTTCTGTTTGATGCACACCATGCTCGTATCACAGTACGTTTTA
CTGCTGCATTGCCCGCTCCATCCTACCCCCAGAAGGACCGGAGAAACTGC
CTGGCAATTTTTTGCCGTGACCTTCGTTTTTTTTTGTCGGGGGATGGGAG
GAGGACGGGAAGGGGAGGCACAAGCACGTTTCCACGGCACACACGTTGCG
GGATTCACAACTTTTGACCATTCCGTGTAACTGTGCGCAGACGAGAAGAT
ATTCGCTACACGATGGCCACACGACACGAACCTCTTTTTGCCTTGCCGAG
CGTTTCGGTCGTCCAGGGCGTGATACGTGCTGCGTTTTCTCAATCAGACA
GCCGGCCGTCTTTCTGCTTCCCGACGTCCGTCTTCGCTTCTTCCTGATCA
TGCTTCTTCGTTTCCTGCGTGCGTGCGTCGGACTCGCGAATCGCCGCCCC
GTGTCTCGCCGAAAACCTGCAGGTGGCGTTCTTCTCCCTCTCTCTCTTCG
GGGACGCGGCGCCGGTGCAGGCGATGCTCGTGGCGCTGAGCACCAGCCCC
CTCATGCTCGCGGTGCTCGCGGGCGGCGCTCAGAACGTGCTGTCCAAGTC
TTGCAAGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12543:293..3502+

>mRNA_H-canaliculatus_F_contig12543.2145.1 ID=mRNA_H-canaliculatus_F_contig12543.2145.1|Name=mRNA_H-canaliculatus_F_contig12543.2145.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1248bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12543:293..3502+ (Hapterophycus canaliculatus Oshoro5f female)
CTGGTCTCGTCCGTCCGGCAGTCCCTGCCCCCCGACGTGGACAAGTGGGG
AGTGTCTCTGCAGCTACTCATGGGCGCGGTCGTGGTGGGGGGTGTCGTGG
TCGCCGGCTGCTATGAGTGGATGCAGCAGAACGTCATCACGGACCCGGAG
TGCGTCGATGCCAGCAGCTGGTCTCGTCCGTCCGGCAGTCCCTGCCCCCC
GACGTGGACAAGTGGGGAGTGTCTCTGCAGCTACTCATGGGCGCGGTCGT
GGTGGGGGGTGTCGTGGTCGCCGGCTGCTATGAGTGGATGCAGCAGAACG
TCATCACGGACCCGGAGTGCGTCGATGCCAGCAGAGCCGCGGACATGAAG
GAGACGACCAGCCTCACGCTTAGGGAGAGCGCGGTGTTTCTGGCCGGGAA
CTCTTATCTTCGGGATGTGGCTGTCCTCGTCATAGCCTACGGCACGAGCA
TCAACATCGTCGAAGAGCCGCGGACATGAAGGAGACGACCAGCCTCACGC
TTAGGGAGAGCGCGGTGTTTCTGGCCGGGAACTCTTATCTTCGGGATGTG
GCTGTCCTCGTCATAGCCTACGGCACGAGCATCAACATCGTCGAAGTCAC
GTGGAAGGCGAAGCTGAAGATGGCGTACCCAGACCCGAACGACTACTCCG
CTTTCATGTCACGTGGAAGGCGAAGCTGAAGATGGCGTACCCAGACCCGA
ACGACTACTCCGCTTTCATGGGAAATTTCTCGACCACAACGGGGCTGGTC
ACCTTGGGCATGATGCTGCTGGGCAGGCAGGTGTTCAAGAACTACGGGTG
GGGCAGCGCAGCTAAGGCGACGCCGGTGGTGCTTCTCGTTACAGGGGGAA
ATTTCTCGACCACAACGGGGCTGGTCACCTTGGGCATGATGCTGCTGGGC
AGGCAGGTGTTCAAGAACTACGGGTGGGGCAGCGCAGCTAAGGCGACGCC
GGTGGTGCTTCTCGTTACAGGGGTGGCGTTCTTCTCCCTCTCTCTCTTCG
GGGACGCGGCGCCGGTGCAGGCGATGCTCGTGGCGCTGAGCACCAGCCCC
CTCATGCTCGCGGTGCTCGCGGGCGGCGCTCAGAACGTGCTGTCCAAGTC
TTGCAAGTGAGTGGCGTTCTTCTCCCTCTCTCTCTTCGGGGACGCGGCGC
CGGTGCAGGCGATGCTCGTGGCGCTGAGCACCAGCCCCCTCATGCTCGCG
GTGCTCGCGGGCGGCGCTCAGAACGTGCTGTCCAAGTCTTGCAAGTGA
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