mRNA_H-canaliculatus_F_contig12523.2137.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12523.2137.1
Unique NamemRNA_H-canaliculatus_F_contig12523.2137.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 4.930e-119
Identity = 240/430 (55.81%), Postives = 262/430 (60.93%), Query Frame = 1
Query:   64 GKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQV------------------------ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFMLRVVRSRRLNGAKGKKGSLARAGGEEAPRSASDAAAGRPRQQPRRSKAIESWL-----------RELEEGLGPGTDSHD--AALERQRQQRPQRYQYGSEDGPRLFDDGREEGEXXXXXXXXXXXXDREDDMEALLEAVERESGAEGKPAPEARRICCRYLLDAFRDGQFGRITLDGVPRVSRGGSRGQFYENSSSESXXXXXXXXAA------G*DRXXXXXXXXXXP---PGTPDNGDVADRLVRDWSSPDAWERADA 1215
            GK AVYACGRTGTNVNKLL WARERGARRGEFSTTGA+AMVVGMPNVGKSSLINLLRGKAN             E AKQV                        ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRV S  AGL LALTRAVPDSAVPPDVLVGFMLRVVRSRR +GA+ +  +        APR+ S AAA RP  QP  SKAI +WL            +     GP     D  +A+ +  +QR    +Y SE G    DD +E+              +REDDMEALLEAVERESGAEGKPA EARRICCR+LLDAFRDGQFGRITLD VPR      R     N+++E          A      G DR              P      D+A+RLVRDWSS DAWE ADA
Sbjct:  145 GKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKAN----WSGSGGGDGEGAKQVCNRPALAAPFSPLRLCRAVPSREVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRSSGARDRSVTA-----PSAPRATSRAAARRPASQPSPSKAIAAWLLQPAGKAERTTTDANGATGPSISDDDETSAVGKHGKQRQADREYTSEPG----DDEKED----------RGDWEREDDMEALLEAVERESGAEGKPALEARRICCRFLLDAFRDGQFGRITLDSVPR------RRVLKTNTAAELASGPLPPGWAQLVARRGKDRGRAEAGRVVREGRRPSASQESDLAERLVRDWSSADAWEGADA 545          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A835Z590_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z590_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.370e-28
Identity = 107/316 (33.86%), Postives = 148/316 (46.84%), Query Frame = 1
Query:   97 GTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQ-------------VSAFRIASNP-PLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFMLRVVRSRRLNGAKGKKGSLARAGGEEAPRSASDAAAGRPRQQPRRSKAIESWLRELEEGLGPGTDSHDAALER-QRQQRPQ---RYQYGSEDGPRLFDDGREEGEXXXXXXXXXXXXDREDDMEALLEAVERESGAEGKPAPEARRICCRYLLDAFRDGQFGRITLD 990
            G  +  LL WARE+GA RG+F T GA+AMVVGMPNVGKS+LIN +R    G             + ++V RVGA PGV                + +FR++  P PLY+VDTPGVMVP + S   GL LALT AVPDS V  +VLV ++  ++ +R   GA     ++                       P  +  +++   E  E L  G  +H   +    + + P+   R    ++DG R                       R    EALL A ER  GA GK   + R++   ++L  FR G FGR++LD
Sbjct:  169 GKGIPGLLRWAREKGALRGQFVTLGAMAMVVGMPNVGKSTLINHMRRLCRGGGKG---------AGRKVVRVGATPGVXXXXXXXXXXXXXXXXIDSFRVSELPQPLYMVDTPGVMVPNIASPTVGLRLALTAAVPDSVVGEEVLVQYLCALLNAR---GAVASCAAVL--------------------DLPESTTLLDA---EASEKLHGGPKTHAVGMRGWSKCEAPRATVRNGVATKDGARRL------------ACRLRRCCCRA--CEALLAAAERRCGAAGKLEEQRRQMAASHVLALFRAGAFGRMSLD 435          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A482RDB0_9ARCH (G domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDB0_9ARCH)

HSP 1 Score: 112 bits (281), Expect = 7.050e-25
Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = 1
Query:  103 NVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
            +V ++L  A +  ++   F T GA  +VVG+PNVGKSS+IN LR  A+                 + A+ GA PG+TR VSAF++ + PPLY+ D+PG+M+PR+ SV AG+ LA+T A+PD+ +P  VL  ++L
Sbjct:   27 HVAQILAMAAQLPSKAAAFRTAGATMVVVGVPNVGKSSIINALRASAH-------------TIQSKGAKTGASPGITRSVSAFKLNTKPPLYVFDSPGIMLPRIESVEAGMKLAVTNALPDTIIPKPVLAEYLL 147          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A1V9YN62_9STRA (Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN62_9STRA)

HSP 1 Score: 110 bits (276), Expect = 5.280e-24
Identity = 63/169 (37.28%), Postives = 96/169 (56.80%), Query Frame = 1
Query:    1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFS-TTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
            +++DL+N  ++ RV  RF + G  +++     G ++ K+L W    G  + +F  T G V MVVG+PNVGKSSLIN  R  ++                K+ A VGA PGVT +   F++  +P +Y++DTPGVM+P + S   GL LALT A+ D  V  +++  +ML
Sbjct:   72 NKSDLANSNMKARVEARFEDAGMDSLFTSVAKGKHIQKILQWCTTHG--KSQFQQTAGTVVMVVGVPNVGKSSLINSFRSISSS---------LKLAKGKKKATVGATPGVTVRTDIFKVNESPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDEVVGTELIADYML 229          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A7S1G8W2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8W2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.310e-23
Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 1
Query:  157 FSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
            +   G++ +V G+PNVGKSS+IN +R +AN R               + A+ G  PGVTR +SA +++S PP+YL+DTPG+M+PRV++   GL LALT A+P++ VP  VLV F+L
Sbjct:   13 YKVAGSLMLVAGVPNVGKSSIINAVRQRANVRK-------------SKSAKTGGEPGVTRHISAIQVSSRPPVYLLDTPGIMLPRVDNPHVGLKLALTGALPENTVPTRVLVDFLL 115          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A418AEZ7_9STRA (CP-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AEZ7_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.310e-23
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1
Query:    1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
            +++DL+N  +++RV  RF EQ    ++     G ++  +L W  E G  + + ST G V MVVG+PNVGKSS+IN  R  +                 K+ A VG  PGVT +    ++   P +Y++DTPGVM+P + S + GL LALT A+ D  V  +++  +ML
Sbjct:   95 NKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHIRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTS---------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYML 252          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A024UI85_9STRA (Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UI85_9STRA)

HSP 1 Score: 107 bits (268), Expect = 6.860e-23
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1
Query:    1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
            +++DL+N  +++RV  RF EQ    ++     G ++  +L W  E G  + + ST G V MVVG+PNVGKSS+IN  R  +                 K+ A VG  PGVT +    ++   P +Y++DTPGVM+P + S + GL LALT A+ D  V  +++  +ML
Sbjct:   72 NKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHMRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTS---------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYML 229          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A6G0WZQ3_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZQ3_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.300e-22
Identity = 61/169 (36.09%), Postives = 92/169 (54.44%), Query Frame = 1
Query:    1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
            ++ DL+N  +++RV  RF EQ    ++     G ++  +L W  E G  + +F ST G V MVVG+PNVGKSS+IN  R  +                 K+ A VG  PGVT +    ++   P +Y++DTPGVM+P + +   GL LALT A+ D  V  +++  +ML
Sbjct:   72 NKTDLANSNMKERVAYRFHEQNMDCMFTSVIKGKHIRNILDWCTEHG--KSQFKSTAGTVVMVVGIPNVGKSSMINAFRSISTS---------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPTPDVGLKLALTGAIKDDIVGVELIADYML 229          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A1V9Y456_9STRA (Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y456_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.720e-22
Identity = 60/171 (35.09%), Postives = 97/171 (56.73%), Query Frame = 1
Query:    1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFMLRVV 513
            +++DL+N  ++ RV  RF  +   +++     G ++ K+L W    G  + + ST G V M+VG+PNVGKSS+IN  R  ++                K+ A VGA PGVT +   F++  +P +Y++DTPGVM+P + +   GL LALT A+ D  V  ++L  +ML ++
Sbjct:   70 NKSDLANSNMKARVEARFDHENIDSMFTSVIKGKHIQKILQWCTAAGKSQFQ-STAGTVVMIVGIPNVGKSSMINAFRSLSSS---------LKVSKGKKKAVVGATPGVTVRTDMFKVNESPAIYVMDTPGVMLPNIPTPEVGLKLALTGAIKDDIVGVELLADYMLFIL 230          
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: T0RG29_SAPDV (Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RG29_SAPDV)

HSP 1 Score: 105 bits (263), Expect = 3.330e-22
Identity = 60/168 (35.71%), Postives = 92/168 (54.76%), Query Frame = 1
Query:    1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
            +++DL+N  ++ RV  RF E     ++     G ++  +L W    G  + + ST G V M+VG+PNVGKSS+IN  R  ++                K+ A VGA PGVT +   F++   P +Y++DTPGVM+P + S   GL LALT A+ D  V  +++  +ML
Sbjct:   71 NKSDLANSNMKARVEARFEEADMDCLFTSVIKGKHIQHILKWCNTHGKSQFQ-STAGTVVMIVGVPNVGKSSMINAFRSISSS---------LKLSKGKKKATVGATPGVTVRTDIFKVNEAPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDDIVGAELIADYML 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K059_9PHAE4.930e-11955.81G domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A835Z590_9STRA3.370e-2833.86P-loop containing nucleoside triphosphate hydrolas... [more]
A0A482RDB0_9ARCH7.050e-2542.54G domain-containing protein (Fragment) n=1 Tax=arc... [more]
A0A1V9YN62_9STRA5.280e-2437.28Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna Tax... [more]
A0A7S1G8W2_9STRA1.310e-2345.69Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A418AEZ7_9STRA2.310e-2336.31CP-type G domain-containing protein (Fragment) n=1... [more]
A0A024UI85_9STRA6.860e-2336.31Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=1... [more]
A0A6G0WZQ3_9STRA1.300e-2236.09Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteich... [more]
A0A1V9Y456_9STRA1.720e-2235.09Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clava... [more]
T0RG29_SAPDV3.330e-2235.71Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12523contigH-canaliculatus_F_contig12523:471..3207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.4
Seed ortholog evalue1.3e-61
Seed eggNOG ortholog2880.D8LR15
Preferred nameMTG1
KEGG koko:K19828
GOsGO:0000313,GO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019222,GO:0019538,GO:0019866,GO:0022613,GO:0031090,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032268,GO:0032543,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043576,GO:0043603,GO:0043604,GO:0044057,GO:0044065,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051246,GO:0060255,GO:0065007,GO:0070013,GO:0070129,GO:0071704,GO:0071840,GO:0080090,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112
EggNOG free text desc.GTP binding
EggNOG OGsCOG1161@1,KOG2485@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMtg1, mitochondrial YlqF-like GTPase
Ec32 orthologEc-07_002420.1
Exons6
Model size1230
Cds size912
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12523.2137.1prot_H-canaliculatus_F_contig12523.2137.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12523 609..2670 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928968.9711077-UTR-H-canaliculatus_F_contig12523:470..6081622928968.9711077-UTR-H-canaliculatus_F_contig12523:470..608Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12523 471..608 -
1696845633.9298887-UTR-H-canaliculatus_F_contig12523:470..6081696845633.9298887-UTR-H-canaliculatus_F_contig12523:470..608Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12523 471..608 -
1622928969.0845735-UTR-H-canaliculatus_F_contig12523:2670..27871622928969.0845735-UTR-H-canaliculatus_F_contig12523:2670..2787Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12523 2671..2787 -
1696845633.9852924-UTR-H-canaliculatus_F_contig12523:2670..27871696845633.9852924-UTR-H-canaliculatus_F_contig12523:2670..2787Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12523 2671..2787 -
1622928969.100753-UTR-H-canaliculatus_F_contig12523:3144..32071622928969.100753-UTR-H-canaliculatus_F_contig12523:3144..3207Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12523 3145..3207 -
1696845633.9939628-UTR-H-canaliculatus_F_contig12523:3144..32071696845633.9939628-UTR-H-canaliculatus_F_contig12523:3144..3207Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12523 3145..3207 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928968.9901047-CDS-H-canaliculatus_F_contig12523:608..6091622928968.9901047-CDS-H-canaliculatus_F_contig12523:608..609Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 609..609 -
1696845633.9402623-CDS-H-canaliculatus_F_contig12523:608..6091696845633.9402623-CDS-H-canaliculatus_F_contig12523:608..609Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 609..609 -
1622928969.011786-CDS-H-canaliculatus_F_contig12523:849..12261622928969.011786-CDS-H-canaliculatus_F_contig12523:849..1226Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 850..1226 -
1696845633.9484508-CDS-H-canaliculatus_F_contig12523:849..12261696845633.9484508-CDS-H-canaliculatus_F_contig12523:849..1226Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 850..1226 -
1622928969.0276155-CDS-H-canaliculatus_F_contig12523:1333..14491622928969.0276155-CDS-H-canaliculatus_F_contig12523:1333..1449Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 1334..1449 -
1696845633.958706-CDS-H-canaliculatus_F_contig12523:1333..14491696845633.958706-CDS-H-canaliculatus_F_contig12523:1333..1449Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 1334..1449 -
1622928969.0410798-CDS-H-canaliculatus_F_contig12523:1960..22581622928969.0410798-CDS-H-canaliculatus_F_contig12523:1960..2258Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 1961..2258 -
1696845633.9690287-CDS-H-canaliculatus_F_contig12523:1960..22581696845633.9690287-CDS-H-canaliculatus_F_contig12523:1960..2258Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 1961..2258 -
1622928969.064897-CDS-H-canaliculatus_F_contig12523:2550..26701622928969.064897-CDS-H-canaliculatus_F_contig12523:2550..2670Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 2551..2670 -
1696845633.9771671-CDS-H-canaliculatus_F_contig12523:2550..26701696845633.9771671-CDS-H-canaliculatus_F_contig12523:2550..2670Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12523 2551..2670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12523.2137.1

>prot_H-canaliculatus_F_contig12523.2137.1 ID=prot_H-canaliculatus_F_contig12523.2137.1|Name=mRNA_H-canaliculatus_F_contig12523.2137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=304bp
MVVGMPNVGKSSLINLLRGKANGRGRGRGEGGGSGESAKQVARVGAMPGV
TRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPP
DVLVGFMLRVVRSRRLNGAKGKKGSLARAGGEEAPRSASDAAAGRPRQQP
RRSKAIESWLRELEEGLGPGTDSHDAALERQRQQRPQRYQYGSEDGPRLF
DDGREEGEEGEDERKEREEMDREDDMEALLEAVERESGAEGKPAPEARRI
CCRYLLDAFRDGQFGRITLDGVPRVSRGGSRGQFYENSSSESSAEAESEA
AAG*
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mRNA from alignment at H-canaliculatus_F_contig12523:471..3207-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12523.2137.1 ID=mRNA_H-canaliculatus_F_contig12523.2137.1|Name=mRNA_H-canaliculatus_F_contig12523.2137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2737bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12523:471..3207- (Hapterophycus canaliculatus Oshoro5f female)
TCACAGGCGGATCTCAGCAACCAAGCCTTGGAACAGCGTGTCCTCCAACG GTTCAGGGAGCAGGTACGTGCAGGCAGGCTAAGGCTTGCCTCCGTCCGTG CCGTACCGCGAGAGGAAGGTCGACGCGGCTTCTCCGTCGCAGGCCTTGTC CGACTCGCGTAGACGCGACGTCCGCTGCCTTGCACCGCACAGCATCGCCC GCCGCACCCACGAAGGAGCCGAGGCTCTGATGCTGATCGACGACCACGGT TGCTTGCGGCGACCTTGTACCGATCTGCCACGGGACGCTGGCTTGCAATC CTGCGGCGCTTGCCATCAGCGCACCCCGAAGACGTATTTTACCCCGTCCG CGCGTGACGGGCACTTCACAAGCGTCCCGACCCCTTTCCTTACGCCCTCG CGTGCACTTGACAACGCTAGGGGAAGACCGCGGTGTACGCTTGCGGACGC ACAGGGACGAACGTGAACAAGCTGCTGACATGGGCGCGGGAACGCGGGGC CAGGAGGGGAGAGTTCTCGACGACGGGAGCTGTCGCCATGGTGGTTGGCA TGCCCAACGTCGGCAAGTCCAGCCTGATCAATCTCCTCCGTGGCAAGGCC AACGGCCGGGGACGGGGAAGAGGGGAGGGAGGAGGGAGCGGAGAGAGTGC GAAGCAGGTGGGCGGTGGTGGGACAGTTGGGAAGCGCATGTGTGAAGGAA GCTGGCTGCTGGGGTCGCTGCTGTTGTTGTTGTTGCTGTTGTCGTTGCTG TTGTTGTTTGTGGTGGCGTTTCTTTCCTTTTCTCCTTTTTCGATGCTGTT TCCTGTTTTCTGACTGAAGGTGTGCTCGGTGGTGTTGCGATGATGTATGA ATGAATGCATCATCTCAGTACTCCTTCCCTTACTTTCCCCTCGCCCGCTC CGGCGCCCTGAAAATCACCACGATGCACCTACGATACGCTCCCCGAAAGG TGGCCCGCGTCGGCGCGATGCCGGGCGTAACCCGTCAAGTGTCTGCCTTC CGGATCGCGTCCAATCCGCCGCTTTATCTCGTTGACACCCCCGGGGTCAT GGTGCCGCGAGTGAACAGCGTCGCGGCCGGGCTGTGCCTAGCGTTGACGA GGGCCGTCCCGGATTCGGCGGTGCCCCCGGACGTCCTGGTTGGGTTCATG CTGCGGGTTGTGCGGTCGAGAAGGCTGAACGGCGCCAAGGGAAAGAAAGG GTCGCTCGCGCGGGCGGGGGGGGAGGAGGCCCCGCGTTCTGCATCAGGTG CGTGCGTGGGCACAAACAGTGGACTCGAGTGTGTGGCCTTCTTAGCGTCG GAGGTTTCGTGCCTGAGCAGCAACTTCTTTGGACAGGAATGTTGAGCGCT TTCGCATTCCGCGCTGGGACGTTGGCGAGGGGCCGCCGCAAAATTGACAG TCCTTGTAAGACGGAGAAAGTCCTGTGGTGTACAACAGAAGTACGATGCC CAAGTTCACGACACTCGGGCATTCGGCTATCGGCCGTTCTTGGGTTCAAG TATTGAAGATAGCGACCGTGTCGCCCAGGGATACGTCAGACGACACGCAC AGGCAGCAGCAGCGTAGAGCCCCGACGTGCAGCATGGGGCAACCATGCAC TCAGCACTCAAACGCAGAATCCCGCTCCAGCAGAATCACGGATGCGGCGT CTACTATGGATAAACCCGGACCAATTTAGACAACGACTCCGGTTTCATCC TTCCCCCGTATTTTTTTTGCGTCCAAAGGTGGCGCCACGCTGGTCGCCGG CGGGCGAGACGCAGCGGCTGGAAGGCCCCGGCAGCAGCCCCGGCGTTCCA AAGCAATAGAGTCGTGGCTGCGGGAACTAGAAGAGGGGCTGGGGCCAGGC ACGGACAGCCACGACGCCGCCCTCGTGTCCCCCCCCCTCCCCTTTCGGAC GTCGACTCCAAGGAGCCTGATTCACGGTACAGGGCGGCCGACGCCGACGA CGCGAACTGGCAGCGGCCGCCGGGGCAGCAGGAGCGGCAGCGGCAGCAGC GACCGCAGCGATATCAGTACGGCTCTGAAGACGGCCCGAGACTCTTCGAC GACGGCAGAGAGGAGGGCGAAGAGGGGGAGGACGAGAGGAAGGAGAGGGA AGAGATGGACCGGGAAGATGACATGGAGGCGCTGCTAGAAGCCGTGGAGC GCGAGAGCGGGGCGGAGGGGAAGCCGGCTCCGGAGGCCCGGCGGATATGC TGCCGGTACCTGCTGGACGCCTTCCGGGACGGGCAGTTCGGGAGGATCAC GCTCGACGGCGTGCCACGGGTGTCCCGCGGGGGGAGCCGCGGACAATTCT ACGAAAATTCTTCTTCTGAATCCTCCGCTGAGGCTGAGTCGGAGGCGGCA GCAGGATGGTGGGCCCCGCCACCGCCACCGTCGCAGCAGCAGCAGCAGCA GCAGCAGCAGGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTGATGGAAACG GTTTTATGCATCAGCACTATCGTCGGGAAGTAGGGCAAGGAGGCGGCGGG GCTTGGGCTGCGGCAACGGCGATGTCTAGGAGGAGGAAGGATTCAGAGGA GCGAGCGGTGCGGACGCCGACAGTCGCAGCGGACGTGAGAACAAGAAGAG ACAGACGGCGGCCGAAGCGGCAGCAGCAGCAGCAGCCTCCTGGTACCCCC GACAACGGTGATGTGGCCGACAGGCTGGTACGGGACTGGTCGAGCCCCGA TGCGTGGGAGAGAGCAGACGCCCGGGGAGGACGGTCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12523:471..3207-

>mRNA_H-canaliculatus_F_contig12523.2137.1 ID=mRNA_H-canaliculatus_F_contig12523.2137.1|Name=mRNA_H-canaliculatus_F_contig12523.2137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1824bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12523:471..3207- (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGGTTGGCATGCCCAACGTCGGCAAGTCCAGCCTGATCAATCTCCT
CCGTGGCAAGGCCAACGGCCGGGGACGGGGAAGAGGGGAGGGAGGAGGGA
GCGGAGAGAGTGCGAAGCAGATGGTGGTTGGCATGCCCAACGTCGGCAAG
TCCAGCCTGATCAATCTCCTCCGTGGCAAGGCCAACGGCCGGGGACGGGG
AAGAGGGGAGGGAGGAGGGAGCGGAGAGAGTGCGAAGCAGGTGGCCCGCG
TCGGCGCGATGCCGGGCGTAACCCGTCAAGTGTCTGCCTTCCGGATCGCG
TCCAATCCGCCGCTTTATCTCGTTGACACCCCCGGGGTCATGGTGCCGCG
AGTGAACAGCGTCGCGGCCGGGCTGTGCCTAGCGTTGACGAGGGCCGTCC
CGGATTCGGCGGTGCCCCCGGACGTCCTGGTTGGGTTCATGCTGCGGGTT
GTGCGGTCGAGAAGGCTGAACGGCGCCAAGGGAAAGAAAGGGTCGCTCGC
GCGGGCGGGGGGGGAGGAGGCCCCGCGTTCTGCATCAGGTGGCCCGCGTC
GGCGCGATGCCGGGCGTAACCCGTCAAGTGTCTGCCTTCCGGATCGCGTC
CAATCCGCCGCTTTATCTCGTTGACACCCCCGGGGTCATGGTGCCGCGAG
TGAACAGCGTCGCGGCCGGGCTGTGCCTAGCGTTGACGAGGGCCGTCCCG
GATTCGGCGGTGCCCCCGGACGTCCTGGTTGGGTTCATGCTGCGGGTTGT
GCGGTCGAGAAGGCTGAACGGCGCCAAGGGAAAGAAAGGGTCGCTCGCGC
GGGCGGGGGGGGAGGAGGCCCCGCGTTCTGCATCAGACGCAGCGGCTGGA
AGGCCCCGGCAGCAGCCCCGGCGTTCCAAAGCAATAGAGTCGTGGCTGCG
GGAACTAGAAGAGGGGCTGGGGCCAGGCACGGACAGCCACGACGCCGCCC
TCACGCAGCGGCTGGAAGGCCCCGGCAGCAGCCCCGGCGTTCCAAAGCAA
TAGAGTCGTGGCTGCGGGAACTAGAAGAGGGGCTGGGGCCAGGCACGGAC
AGCCACGACGCCGCCCTCGAGCGGCAGCGGCAGCAGCGACCGCAGCGATA
TCAGTACGGCTCTGAAGACGGCCCGAGACTCTTCGACGACGGCAGAGAGG
AGGGCGAAGAGGGGGAGGACGAGAGGAAGGAGAGGGAAGAGATGGACCGG
GAAGATGACATGGAGGCGCTGCTAGAAGCCGTGGAGCGCGAGAGCGGGGC
GGAGGGGAAGCCGGCTCCGGAGGCCCGGCGGATATGCTGCCGGTACCTGC
TGGACGCCTTCCGGGACGGGCAGTTCGGGAGGATCACGCTCGACGGCGTG
CCACGGGTGTCCCGCGGGGGGAGCCGCGGACAATTCTACGAAAATTCTTC
TTCTGAATCCTCCGCTGAGGCTGAGTCGGAGGCGGCAGCAGGATGGAGCG
GCAGCGGCAGCAGCGACCGCAGCGATATCAGTACGGCTCTGAAGACGGCC
CGAGACTCTTCGACGACGGCAGAGAGGAGGGCGAAGAGGGGGAGGACGAG
AGGAAGGAGAGGGAAGAGATGGACCGGGAAGATGACATGGAGGCGCTGCT
AGAAGCCGTGGAGCGCGAGAGCGGGGCGGAGGGGAAGCCGGCTCCGGAGG
CCCGGCGGATATGCTGCCGGTACCTGCTGGACGCCTTCCGGGACGGGCAG
TTCGGGAGGATCACGCTCGACGGCGTGCCACGGGTGTCCCGCGGGGGGAG
CCGCGGACAATTCTACGAAAATTCTTCTTCTGAATCCTCCGCTGAGGCTG
AGTCGGAGGCGGCAGCAGGATGAA
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