|
|
Homology
BLAST of mRNA_H-canaliculatus_F_contig1251.2126.1 vs. uniprot
Match: A0A6H5K7S5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S5_9PHAE) HSP 1 Score: 356 bits (914), Expect = 2.240e-104 Identity = 433/737 (58.75%), Postives = 478/737 (64.86%), Query Frame = 1
Query: 316 DMDPSALASPS-SSTGSHPSFCD-PSSTEGAPADTMREAIRGMESELVDLVFDSSTGERSPAARLADWLKVPLERATASGNLAVVKRLLDAGVGTNPPSNGMRLGLLLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASAPLADVNVADTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLHRLEACIALLRGGATIGRVCSQGLSCLDAAASSGYSGQLLQILTAGESPSDRRRRCSLALYYAAKANNVDTIRELVALGANIDTKRSGGNTNLHCTATRGADRATEALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYELVGSSIEEELLSPEAVVSKVQLDAAIRSMLVNAPADRTWRRRGWIVLCRARWLARIAEKARRVRLPVIALSTGG-----------FRRSSGGADRNGGAPYGKTTANKKRKGKRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXSAALASKAILSSSGGNVGNNKGKGQAVPREKGYVGNRSKTTNPNVFNVSGSSXXXXXXXXXKRADSKNVQIGERTRTAKLTLLCDVASFRSSSRSGGSEAAEAAAVLAAFSTTQRPQLRLGRDSVLSEDAPVPGVTVADKENEKEKKEQEKLGAKGKSGFVAAVERLLLVREEGVFREIVSFL 2487
D D + A PS SS GS FCD P+ T AD MREAIRGMES+LVDLVF S+ R+P L DWLKVPLE ATASGNLAVVKRLL AGVGT+PPSNGMRL LLLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IAS P A VNVADTR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L ACIALLRGGAT+GRVCS+GLSCLD AA +G+SGQLLQILTAGESP+DR+RRCSLALYYAAKAN DTIR+LV LGA+++T RS GNTNLHCTATRGA AT+ALL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A++LVG S+EEELLS EA+VSK +D AIRSMLVNAPADR WRRRGW+VLCRARWLAR+AEK + + PV + +GG GK ANK+R+ K XXXXXXXXXXXXXXXXXXXXXXXXXXX K + R +G V +S SS ++ SK+ LC + R + +G AA Q PQLRLGR+S+L E P V E GA+ + GFV AVERLLL+REEGVFR+IVSFL
Sbjct: 26 DTDMGSCAPPSPSSIGSLAPFCDNPAYTS---ADAMREAIRGMESDLVDLVFSGSS--RAPPRELEDWLKVPLEYATASGNLAVVKRLLSAGVGTDPPSNGMRLRLLLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDAAVRAIASDPRAVVNVADTRGWTPLHIAANAGYRGVVVFLLLKGAKSWLKIASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGACIALLRGGATVGRVCSKGLSCLDTAAWNGHSGQLLQILTAGESPADRKRRCSLALYYAAKANKTDTIRDLVDLGADVNTTRSAGNTNLHCTATRGAYAATQALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETATNYDNLTAHDLVGHSVEEELLSNEALVSKELVDTAIRSMLVNAPADRVWRRRGWLVLCRARWLARVAEKRKPLLAPVASACSGGGSXXXXXXXXXXXXXXXXXXXXXXVSSGKGPANKRRRAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRASGA----------------RTEGSV----------AAGLSPSS---------RKNFSKD-------------KLCCLFGRRENGVAGAG-----AAPTVGPGVVQPPQLRLGRESLLREGGPAAAGKV------------EVPGAEERPGFVVAVERLLLLREEGVFRDIVSFL 692
BLAST of mRNA_H-canaliculatus_F_contig1251.2126.1 vs. uniprot
Match: D8LNL9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL9_ECTSI) HSP 1 Score: 265 bits (677), Expect = 2.790e-72 Identity = 281/427 (65.81%), Postives = 300/427 (70.26%), Query Frame = 1
Query: 316 DMDPSALASPS-SSTGSHPSFCD-PSSTEGAPADTMREAIRGMESELVDLVFDSSTGERSPAARLADWLKVPLERATASGNLAVVKRLLDAGVGTNPPSNGMRLGLLLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASAPLADVNVADTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLHRLEACIALLRGGATIGRVCSQGLSCLDAAASSGYSGQLLQILTAGESPSDRRRRCSLALYYAAKANNVDTIRELVALGANIDTKRSGGNTNLHCTATRGADRATEALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYELVGSSIEEELLSPEAV 1590
D D + A PS SS GS P FCD PS T AD MREA+RGMESELVDLVF S+ R+P L DWLKVPLE ATASGNLAVVKRLL AGVGT+PPSNGMRL LLLH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IAS P A VNVADTR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L ACIALLRGGAT+GRVCS+GLSCLD AA +G+SGQLLQILTA ESP+DR+RRCSLALYYAAKAN DTIR+LV LGA+++T RSGGNTNLHCTATRGA AT ALL XXXXXXXXXXX A++LVG S+EEELLS EA+
Sbjct: 24 DTDMGSCAPPSPSSIGSLPPFCDNPSYTS---ADAMREAVRGMESELVDLVFSGSS--RAPPRELEDWLKVPLEYATASGNLAVVKRLLSAGVGTDPPSNGMRLRLLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDAAVRAIASDPRAVVNVADTRGWTPLHIAANAGYRGVVVFLLLKGAKSWLKIASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGACIALLRGGATVGRVCSKGLSCLDTAAWNGHSGQLLQILTAVESPADRKRRCSLALYYAAKANKTDTIRDLVDLGADVNTTRSGGNTNLHCTATRGAYAATHALLRTGANLEIRNNXXXXXXXXXXXFSQSDTVQLLLRWGADETATNYDNLTAHDLVGHSVEEELLSNEAL 445
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 270.0 |
| Seed ortholog evalue | 3.3e-69 |
| Seed eggNOG ortholog | 2880.D8LNL9 |
| KEGG ko | ko:K21440 |
| GOs | GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 3920 |
| Cds size | 2283 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928967.3393362-UTR-H-canaliculatus_F_contig1251:1380..1479 | 1622928967.3393362-UTR-H-canaliculatus_F_contig1251:1380..1479 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 1381..1479 - |
| 1696845633.4088817-UTR-H-canaliculatus_F_contig1251:1380..1479 | 1696845633.4088817-UTR-H-canaliculatus_F_contig1251:1380..1479 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 1381..1479 - |
| 1622928967.350633-UTR-H-canaliculatus_F_contig1251:1489..2782 | 1622928967.350633-UTR-H-canaliculatus_F_contig1251:1489..2782 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 1490..2782 - |
| 1696845633.4210575-UTR-H-canaliculatus_F_contig1251:1489..2782 | 1696845633.4210575-UTR-H-canaliculatus_F_contig1251:1489..2782 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 1490..2782 - |
| 1622928967.3622382-UTR-H-canaliculatus_F_contig1251:3410..3448 | 1622928967.3622382-UTR-H-canaliculatus_F_contig1251:3410..3448 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 3411..3448 - |
| 1696845633.4363832-UTR-H-canaliculatus_F_contig1251:3410..3448 | 1696845633.4363832-UTR-H-canaliculatus_F_contig1251:3410..3448 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 3411..3448 - |
| 1622928967.3965588-UTR-H-canaliculatus_F_contig1251:6157..6291 | 1622928967.3965588-UTR-H-canaliculatus_F_contig1251:6157..6291 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 6158..6291 - |
| 1696845633.4695103-UTR-H-canaliculatus_F_contig1251:6157..6291 | 1696845633.4695103-UTR-H-canaliculatus_F_contig1251:6157..6291 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 6158..6291 - |
| 1622928967.4085822-UTR-H-canaliculatus_F_contig1251:7377..7450 | 1622928967.4085822-UTR-H-canaliculatus_F_contig1251:7377..7450 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 7378..7450 - |
| 1696845633.4807785-UTR-H-canaliculatus_F_contig1251:7377..7450 | 1696845633.4807785-UTR-H-canaliculatus_F_contig1251:7377..7450 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1251 7378..7450 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928967.3766775-CDS-H-canaliculatus_F_contig1251:3448..4899 | 1622928967.3766775-CDS-H-canaliculatus_F_contig1251:3448..4899 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1251 3449..4899 - |
| 1696845633.4485047-CDS-H-canaliculatus_F_contig1251:3448..4899 | 1696845633.4485047-CDS-H-canaliculatus_F_contig1251:3448..4899 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1251 3449..4899 - |
| 1622928967.3865898-CDS-H-canaliculatus_F_contig1251:5325..6157 | 1622928967.3865898-CDS-H-canaliculatus_F_contig1251:5325..6157 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1251 5326..6157 - |
| 1696845633.4577446-CDS-H-canaliculatus_F_contig1251:5325..6157 | 1696845633.4577446-CDS-H-canaliculatus_F_contig1251:5325..6157 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1251 5326..6157 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1251.2126.1 >prot_H-canaliculatus_F_contig1251.2126.1 ID=prot_H-canaliculatus_F_contig1251.2126.1|Name=mRNA_H-canaliculatus_F_contig1251.2126.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=761bp
MAGLQLQDALQDAAAASASDMEMDMDTDMDMDMDMADMDPSALASPSSST GSHPSFCDPSSTEGAPADTMREAIRGMESELVDLVFDSSTGERSPAARLA DWLKVPLERATASGNLAVVKRLLDAGVGTNPPSNGMRLGLLLHTAAGSGN AGVVEAILKCGADVRGMDKDLHNWTALHVAAAAGHDAAVRAIASAPLADV NVADTRGWTPLHVAANAGHRGVVVFLLLKGATALRMSVPEGDSPLHLAAT NNHAGVIEDLLTLGNASVGSCNNAGRTALHLAARLHRLEACIALLRGGAT IGRVCSQGLSCLDAAASSGYSGQLLQILTAGESPSDRRRRCSLALYYAAK ANNVDTIRELVALGANIDTKRSGGNTNLHCTATRGADRATEALLLSGADL ETRNNDGATALHRACSFSQSSTVQLLLRWGADETATTTDNVTAYELVGSS IEEELLSPEAVVSKVQLDAAIRSMLVNAPADRTWRRRGWIVLCRARWLAR IAEKARRVRLPVIALSTGGFRRSSGGADRNGGAPYGKTTANKKRKGKRGD RGGGGGGRGVGAGVEVGGGVGGGAGGGSAALASKAILSSSGGNVGNNKGK GQAVPREKGYVGNRSKTTNPNVFNVSGSSGGGGGGGGGKRADSKNVQIGE RTRTAKLTLLCDVASFRSSSRSGGSEAAEAAAVLAAFSTTQRPQLRLGRD SVLSEDAPVPGVTVADKENEKEKKEQEKLGAKGKSGFVAAVERLLLVREE GVFREIVSFL* back to topmRNA from alignment at H-canaliculatus_F_contig1251:1381..7450- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1251.2126.1 ID=mRNA_H-canaliculatus_F_contig1251.2126.1|Name=mRNA_H-canaliculatus_F_contig1251.2126.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6070bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1251:1381..7450- (Hapterophycus canaliculatus Oshoro5f female) ACCCAAGAGGCGGGACCGCGAAATGAGCAAAAGAGGTTGACCCAAGCCAG
GCCAAGACCCTTCACGGAAGCGGGTAAGGAGAGAAGGGTGTCGGAAACTT
TCGGTTCAGAGTCGTGGTGCGTGTGTTTGCAGCCGGCAAATATCAGCAGT
GACGGTTGCCTTCTTCAATTCAAACAGGCGTCCGATTGTTGCCCGGGTTG
TTTCAGCCTGCTGCTCCTTCCCCAACGTAACTATCAACAGACGGCAACTT
CTTATTCGGTATTGAACGGGGGGCAAACGTGCGTGCTAGTATCGCCCGGG
CCAATCTTGCCGAAGGTACACTGTTCTTGCTCTCACGATGTACGTCCCAC
GCGACATGGAACAAAAGTGCGAAGAGCACGGGAAATAAAAACCGCAACAA
CCGAAACATCAACCGACAGAGAAAACCAACGCGAGCGCACGTTTCTGAAG
AAACAAAAACACCCCCTGCTGCAACCTTGCGACGCCTGGGCAAGGTCAAG
TCCAGAGTGGGGCGAGGTCCACACGATCAGATGCACGAAGAATCCAGAGA
CACCTCTTCGTTGTTTCCACGCAGACTGGCGCGTCAAAAGCTAGCTTGAC
CAGTGTGCCTTCTCCTTCGAAGGCGTGTTGGCTCTTGGGATCGAGCTCGA
TCTCTGTCTGAACCGGGAACTGCCGTCGTTGTGTCATCGTCGTCGTTACC
TGTACTGATGATCGTAGTTCGGTGACGCATGTATCCACCTTCGGTGAAAG
ACTCTGCCCTTCCCTATCCTATCCTTTCCCTTCCCATCCTATCTCCCTGT
CAACCTACTTTATGAGCCCGTTCGATGTGCGATGGCCTCCCAAGCGTTCC
AGGAGGAAACCAAGTAACCCTCGAAATGGTATGCTGCGAAGCCGTTTTTT
TCCGGAGTTGGCGTCGATTCATCTCGACCCAAGTTCACCGTGTGGCACCC
GACCTGAGTAGTCTTATATGGTATGTCCCCGCGTGGTTGCTCCGGCCTCT
AGCAAGCCAGCGGGGGCCGCACGCTGGAACGCAGAAAGCACGAAAGCACC
CCCTCACGAGAATACCTCGCACCTTGACACAGCACTGGACACTATAATAG
ACACCTCTCCACTCTGGCCGACCCCTCCCTGCCACTGCCGTTCCGCACCG
CCGTCACAGCGCCTGAGAAACTACGCTAACAGCAACCCCAGCCGCTGAGG
CGCGTCTCCAAGACGCAAGGCGTGCGGGGTATCACCGACGACAACACCCC
CTCGCGGGCGGACCGAGCTCCTCACGACCGCCAGGTATCTTCGATGGCAG
GCCTGCAACTCCAGGACGCTCTCCAGGACGCCGCGGCGGCGTCCGCATCT
GACATGGAAATGGACATGGATACGGACATGGACATGGACATGGACATGGC
GGACATGGATCCCTCCGCCCTCGCGTCTCCGTCGTCTTCGACAGGGTCCC
ACCCGTCCTTCTGCGACCCATCATCCACCGAGGGCGCGCCCGCCGACACC
ATGAGAGAAGCGATCCGCGGCATGGAATCCGAGCTGGTGGACCTCGTGTT
CGACAGCAGCACCGGTGAGCGCTCCCCGGCCGCCCGGCTGGCGGACTGGC
TCAAGGTGCCGCTCGAGCGCGCCACAGCGAGCGGCAACCTGGCCGTCGTG
AAACGGCTGCTGGACGCCGGCGTGGGGACCAACCCGCCGTCGAACGGGAT
GCGGCTGGGACTGCTCCTGCACACGGCGGCCGGTAGCGGGAACGCGGGTG
TCGTTGAGGCGATCCTCAAGTGCGGGGCGGACGTGCGCGGGATGGACAAG
GATCTCCACAACTGGACGGCCCTCCACGTCGCCGCCGCGGCCGGGCACGA
CGCAGCCGTCAGGGCCATCGCCAGTGCACCCCTGGCGGACGTGAACGTGG
CGGACACTCGGGGCTGGACGCCGCTTCACGTGGCCGCTAACGCCGGGCAC
CGAGGGGTGGTGGTGTTCCTGCTCCTCAAGGGGGCGACGGCGCTGCGAAT
GTCCGTGCCCGAGGGGGACTCGCCGCTTCACCTGGCGGCCACGAACAACC
ACGCCGGGGTGATCGAGGACCTGCTCACTCTGGGGAACGCCAGCGTGGGC
TCGTGTAACAACGCCGGACGAACAGGTTCGTTGTGTGATGGCACTCTTGA
GCTTTTCGAGGAGCAAGCACACGTAGCGCTCTTCCCGCCAATCCATGGGA
AGCGAATAACACTCCCCGTTTGGCCTTGGCTTGGGGTTCGGGCGATGCGA
TACCTCCGGTTGGTGGGAAACGTCGCGCGAGCGCGGAGTTCCTTGTCCAG
CCGTCTTTCACACCACCGAGAATGTTGATCAAGAACCACGGCTCCCGGTG
CAAGCAGCGCCTTCTGTGACCCAGCTTCCACGCATCGTACGCCGTACTTG
TACAGCACCTGCATGTGGCGCCCAAACTCGCAGTGGCTCGGGCCCCCATT
TTGCCATTTCGTTCCGACCCCATTCCTGCCTTGTTCGCGCCGCTTGTTGA
ACTACGCGAACTACCCCCCCGGTGGTTTCAAAACCGCGGCGACTGCACCA
GCGCTCCACCTGGCGGCACGCCTGCACCGCCTGGAGGCCTGCATTGCTCT
GCTCCGCGGCGGCGCAACCATAGGCCGCGTGTGCTCCCAGGGCCTGAGTT
GCCTCGACGCTGCCGCCTCGAGCGGCTATTCCGGGCAGCTGCTGCAGATC
CTGACGGCGGGCGAGTCGCCCAGCGACCGGCGGCGGCGGTGCAGCCTTGC
GCTCTACTACGCCGCCAAGGCCAACAACGTGGACACCATCCGCGAGCTGG
TGGCCCTGGGCGCCAACATCGACACCAAACGGTCAGGCGGAAACACGAAC
CTCCACTGCACCGCCACAAGGGGCGCGGACCGGGCGACCGAGGCCCTCCT
CCTCTCGGGCGCCGACCTCGAGACGAGGAACAACGACGGCGCGACGGCCC
TCCACCGAGCCTGCAGCTTCTCCCAGTCGAGCACGGTGCAGCTCCTGCTC
CGGTGGGGCGCGGACGAGACGGCCACGACGACGGACAACGTTACCGCCTA
TGAGCTCGTGGGTTCGTCTATAGAGGAGGAGCTGCTCTCGCCGGAGGCGG
TGGTGAGCAAGGTGCAGCTGGACGCCGCCATCCGCTCGATGCTCGTGAAC
GCCCCGGCCGACCGGACCTGGCGGCGGAGGGGCTGGATCGTCCTCTGCCG
CGCCCGGTGGTTGGCCAGGATAGCCGAGAAGGCGAGGAGGGTTCGGCTGC
CGGTGATCGCCCTCTCGACCGGCGGCTTCCGCAGGAGTAGCGGCGGTGCC
GACAGGAACGGCGGCGCGCCGTACGGAAAGACGACTGCCAACAAGAAGCG
CAAGGGAAAGCGGGGTGATCGAGGAGGAGGAGGAGGAGGACGAGGGGTGG
GGGCGGGGGTCGAGGTGGGAGGAGGAGTGGGAGGAGGAGCAGGAGGAGGC
AGCGCGGCATTGGCATCAAAGGCGATCCTATCTTCTTCCGGCGGCAACGT
GGGCAACAACAAGGGTAAGGGCCAGGCCGTGCCTCGGGAAAAGGGATACG
TGGGAAACAGAAGCAAAACCACAAACCCAAACGTTTTCAACGTCAGCGGA
AGTAGCGGTGGTGGCGGCGGCGGCGGCGGCGGAAAGCGAGCGGACTCTAA
AAATGTTCAAATCGGTGAAAGAACCCGAACCGCCAAGCTGACACTGTTAT
GCGATGTTGCGAGCTTTCGAAGCAGCAGTCGATCGGGCGGTTCAGAGGCG
GCGGAGGCGGCGGCGGTGCTGGCGGCGTTCAGCACGACGCAGCGGCCGCA
GTTGAGGCTCGGACGGGACAGCGTTTTGAGCGAGGATGCCCCCGTGCCTG
GCGTGACTGTGGCGGACAAGGAAAATGAGAAGGAGAAAAAAGAGCAAGAG
AAGCTGGGTGCCAAGGGGAAGTCGGGCTTCGTGGCGGCGGTAGAGCGGCT
ACTGCTCGTGCGAGAGGAGGGCGTTTTCAGAGAGATCGTGTCCTTCTTGT
GACCGAGACATCGAGGTCCAGCCCGGGTTCGTTTCCCGAGGTGGGTAGTA
AAAGTTCGCGAACAACGTGCGAAGGCTGGTCATCGTGTCGGATTGGTGTG
GTCATCATTGTCGTGCCATTCATGGGTACTGTTTTCTGTTGATGCTGATG
TTGTTGTTGCTCCCCTGGCGGTTGTCGTTGATCTTCTTGTTAGCGGTCAC
GTTCCTTCATGCTTCGTGTATCACAAATGTGTTCCGCTTGCATCATGCGC
AACATCCAGATAGCTCGAACGGGGACCCCGTGTTTGAGCGCTTGCCATGT
CCCCCGCCACAAGTTCCACCTCGAAGTTAGAGTTGCTGAGGCAGTCAGAC
AAGGTGAAGGGCAGGTAGAAGCACATGTGAAGGGAAAGATGCTGCCCGGC
AGCCTCCATGACTCCTTGAGTCTCCCACCCTCTTCGCTGACCCTCGTTTT
ATTGAAGTGCTCTACAATTGTATATCTATCATGGCCCTGTGGAGTAATCG
AAGGGGACCTCGGTGATCCTGGGCGAAAACATGTTTTTTCCTGGAGGCAT
TTGGCCGCTTGGAAGCAAAAACAGTAGTCAACCGCGAGGAGGAAGAGAGA
CGAGAAAACGGTGAATCGAGATGACTGACTGACGACAACCGTGCTCCGTC
GTTGCCTCCGTCGTCCAGGTGGCAACTGTTCCTGCTTGGACGTGAGAGCG
GGGAGCAGAGGAGGAAAGACAACGCCACTGTTTTCTGGAACAAGGTCGAA
GCATCTGGCGCCTTCGGCTCTCGGATCCTGTCAGGGGACGTGGCTGCGTT
TATGGTCCCCATCCACCTAGCGATTCGCTCTCCTGCTCAGCCATCTCGTG
TACGATACTACTGGCGGTTCGATTGAACGCCGTCTGGGAAGTGGCCTTTC
CCGCCACACTTGTCCAAAATTATGCTGCGAAAAGCAAAAACGTTCTCCCA
GCCAGCCCACTGGTTCGTCGTTTTGCTAAGGCTGAGAATGTTTTCCCCGC
TCGGGACGTTTGAGAATGAAGACAGCGATGCACAAGGTGCGCAGGTCAAG
AACTTGTACGAACATGTGGGAAGGGTGACCCGCCGACAGCTCTCTGACAG
CCTCCGCCACGCACCCTGTGTCAAGGCCATGGCCCCTTACGTTTTGTTAC
GAAACAAATGCACTGCTTTTCATGTACGTTCTGCCATGAGCTGGTATTTT
TTCGTCGTGGGTTGGTGGGAGGAGGGGGGGGGCGCGGGATGCTTCGCTTT
TTTCCCTGATAGGGTGCTTGGCGAATGATATCATTTCATGGTTGGCCTGT
CGGCGAGGCGAGGCTCGGTTGGATTCTGTCGTTGGTGTTGTTGTTTTCGT
TGGTTATGGTGATGGTGGTGGTGTTTTGCTGTTTGTTGCTCTTGATATCA
GTGCCGCCTTTGTGTTGATGCAGCAGCTGTGTCAGCTTTGCTGTGGGATT
GTTATGGGTGCTGCGGTGGGGTGGGTGCGGGTGATACACCCGAAGATGTG
GCATCGCGGAGGTTGGATTGGGGCCGTGCACGCAGAGGTATCGTGTTTGC
TACTGAGCCCACAAGGCAAAATGTTCCAAAAGATTGTTTCATACGCTTGA
AGGTACGGAAGCTGAAACAGCACGGCATGTGGTATCAGCAGTATAGTTAG
TAGTGGTGGAACACGATTGCTACTTGTGATCAACACGACTGCTGCTTGTG
ATCGTCAGCCGCTTGTTGTAATTTTACTCGAAGCGTATGTTCGATAGTAG
ACACTACAAGTAATACAGTATTGGTGTTGCGGGATGGACTACCGTTGATT
CTCGGGTACAGCAGTGGTGAAGCATCTCGGCAGAATCCAGCAGCCACGAA
ACATTGTTCCAAGCAGATTTTTTCTTATCCCGAGGTTTCTATCCACCAAG
AAACACCTTCAGAAGATGGGAAAAAAGGAGTTAGTTCGTGCAGACCAGTC
GAAGAACATGCGCGAAAATAGAGAAAATACAGTACTGCTGTAGTACCTTT
GTTGTTTTCGAAAGATGGACGGCAGACGCCTCTTCGACAACGACGACACG
GAATGAAAAGATCAGTCAGT back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1251:1381..7450- >mRNA_H-canaliculatus_F_contig1251.2126.1 ID=mRNA_H-canaliculatus_F_contig1251.2126.1|Name=mRNA_H-canaliculatus_F_contig1251.2126.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4566bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1251:1381..7450- (Hapterophycus canaliculatus Oshoro5f female) ATGGCAGGCCTGCAACTCCAGGACGCTCTCCAGGACGCCGCGGCGGCGTC CGCATCTGACATGGAAATGGACATGGATACGGACATGGACATGGACATGG ACATGGCGGACATGGATCCCTCCGCCCTCGCGTCTCCGTCGTCTTCGACA GGGTCCCACCCGTCCTTCTGCGACCCATCATCCACCGAGGGCGCGCCCGC CGACACCATGAGAGAAGCGATCCGCGGCATGGAATCCGAGCTGGTGGACC TCGTGTTCGACAGCAGCACCGGTGAGCGCTCCCCGGCCGCCCGGCTGGCG GACTGGCTCAAGGTGCCGCTCGAGCGCGCCACAGCGAGCGGCAACCTGGC CGTCGTGAAACGGCTGCTGGACGCCGGCGTGGGGACCAACCCGCCGTCGA ACGGGATGCGGCTGGGACTGCTCCTGCACACGGCGGCCGGTAGCGGGAAC GCGGGTGTCGTTGAGGCGATCCTCAAGTGCGGGGCGGACGTGCGCGGGAT GGACAAGGATCTCCACAACTGGACGGCCCTCCACGTCGCCGCCGCGGCCG GGCACGACGCAGCCGTCAGGGCCATCGCCAGTGCACCCCTGGCGGACGTG AACGTGGCGGACACTCGGGGCTGGACGCCGCTTCACGTGGCCGCTAACGC CGGGCACCGAGGGGTGGTGGTGTTCCTGCTCCTCAAGGGGGCGACGGCGC TGCGAATGTCCGTGCCCGAGGGGGACTCGCCGCTTCACCTGGCGGCCACG AACAACCACGCCGGGGTGATCGAGGACCTGCTCACTCTGGGGAACGCCAG CGTGGGCTCGTGTAACAACGCCGGACGAACAGATGGCAGGCCTGCAACTC CAGGACGCTCTCCAGGACGCCGCGGCGGCGTCCGCATCTGACATGGAAAT GGACATGGATACGGACATGGACATGGACATGGACATGGCGGACATGGATC CCTCCGCCCTCGCGTCTCCGTCGTCTTCGACAGGGTCCCACCCGTCCTTC TGCGACCCATCATCCACCGAGGGCGCGCCCGCCGACACCATGAGAGAAGC GATCCGCGGCATGGAATCCGAGCTGGTGGACCTCGTGTTCGACAGCAGCA CCGGTGAGCGCTCCCCGGCCGCCCGGCTGGCGGACTGGCTCAAGGTGCCG CTCGAGCGCGCCACAGCGAGCGGCAACCTGGCCGTCGTGAAACGGCTGCT GGACGCCGGCGTGGGGACCAACCCGCCGTCGAACGGGATGCGGCTGGGAC TGCTCCTGCACACGGCGGCCGGTAGCGGGAACGCGGGTGTCGTTGAGGCG ATCCTCAAGTGCGGGGCGGACGTGCGCGGGATGGACAAGGATCTCCACAA CTGGACGGCCCTCCACGTCGCCGCCGCGGCCGGGCACGACGCAGCCGTCA GGGCCATCGCCAGTGCACCCCTGGCGGACGTGAACGTGGCGGACACTCGG GGCTGGACGCCGCTTCACGTGGCCGCTAACGCCGGGCACCGAGGGGTGGT GGTGTTCCTGCTCCTCAAGGGGGCGACGGCGCTGCGAATGTCCGTGCCCG AGGGGGACTCGCCGCTTCACCTGGCGGCCACGAACAACCACGCCGGGGTG ATCGAGGACCTGCTCACTCTGGGGAACGCCAGCGTGGGCTCGTGTAACAA CGCCGGACGAACAGCGCTCCACCTGGCGGCACGCCTGCACCGCCTGGAGG CCTGCATTGCTCTGCTCCGCGGCGGCGCAACCATAGGCCGCGTGTGCTCC CAGGGCCTGAGTTGCCTCGACGCTGCCGCCTCGAGCGGCTATTCCGGGCA GCTGCTGCAGATCCTGACGGCGGGCGAGTCGCCCAGCGACCGGCGGCGGC GGTGCAGCCTTGCGCTCTACTACGCCGCCAAGGCCAACAACGTGGACACC ATCCGCGAGCTGGTGGCCCTGGGCGCCAACATCGACACCAAACGGTCAGG CGGAAACACGAACCTCCACTGCACCGCCACAAGGGGCGCGGACCGGGCGA CCGAGGCCCTCCTCCTCTCGGGCGCCGACCTCGAGACGAGGAACAACGAC GGCGCGACGGCCCTCCACCGAGCCTGCAGCTTCTCCCAGTCGAGCACGGT GCAGCTCCTGCTCCGGTGGGGCGCGGACGAGACGGCCACGACGACGGACA ACGTTACCGCCTATGAGCTCGTGGGTTCGTCTATAGAGGAGGAGCTGCTC TCGCCGGAGGCGGTGGTGAGCAAGGTGCAGCTGGACGCCGCCATCCGCTC GATGCTCGTGAACGCCCCGGCCGACCGGACCTGGCGGCGGAGGGGCTGGA TCGTCCTCTGCCGCGCCCGGTGGTTGGCCAGGATAGCCGAGAAGGCGAGG AGGGTTCGGCTGCCGGTGATCGCCCTCTCGACCGGCGGCTTCCGCAGGAG TAGCGGCGGTGCCGACAGGAACGGCGGCGCGCCGTACGGAAAGACGACTG CCAACAAGAAGCGCAAGGGAAAGCGGGGTGATCGAGGAGGAGGAGGAGGA GGACGAGGGGTGGGGGCGGGGGTCGAGGTGGGAGGAGGAGTGGGAGGAGG AGCAGGAGGAGGCAGCGCGGCATTGGCATCAAAGGCGATCCTATCTTCTT CCGGCGGCAACGTGGGCAACAACAAGGGTAAGGGCCAGGCCGTGCCTCGG GAAAAGGGATACGTGGGAAACAGAAGCAAAACCACAAACCCAAACGTTTT CAACGTCAGCGGAAGTAGCGGTGGTGGCGGCGGCGGCGGCGGCGGAAAGC GAGCGGACTCTAAAAATGTTCAAATCGGTGAAAGAACCCGAACCGCCAAG CTGACACTGTTATGCGATGTTGCGAGCTTTCGAAGCAGCAGTCGATCGGG CGGTTCAGAGGCGGCGGAGGCGGCGGCGGTGCTGGCGGCGTTCAGCACGA CGCAGCGGCCGCAGTTGAGGCTCGGACGGGACAGCGTTTTGAGCGAGGAT GCCCCCGTGCCTGGCGTGACTGTGGCGGACAAGGAAAATGAGAAGGAGAA AAAAGAGCAAGAGAAGCTGGGTGCCAAGGGGAAGTCGGGCTTCGTGGCGG CGGTAGAGCGGCTACTGCTCGTGCGAGAGGAGGGCGTTTTCAGAGAGATC GTGTCCTTCTTGTGACGCTCCACCTGGCGGCACGCCTGCACCGCCTGGAG GCCTGCATTGCTCTGCTCCGCGGCGGCGCAACCATAGGCCGCGTGTGCTC CCAGGGCCTGAGTTGCCTCGACGCTGCCGCCTCGAGCGGCTATTCCGGGC AGCTGCTGCAGATCCTGACGGCGGGCGAGTCGCCCAGCGACCGGCGGCGG CGGTGCAGCCTTGCGCTCTACTACGCCGCCAAGGCCAACAACGTGGACAC CATCCGCGAGCTGGTGGCCCTGGGCGCCAACATCGACACCAAACGGTCAG GCGGAAACACGAACCTCCACTGCACCGCCACAAGGGGCGCGGACCGGGCG ACCGAGGCCCTCCTCCTCTCGGGCGCCGACCTCGAGACGAGGAACAACGA CGGCGCGACGGCCCTCCACCGAGCCTGCAGCTTCTCCCAGTCGAGCACGG TGCAGCTCCTGCTCCGGTGGGGCGCGGACGAGACGGCCACGACGACGGAC AACGTTACCGCCTATGAGCTCGTGGGTTCGTCTATAGAGGAGGAGCTGCT CTCGCCGGAGGCGGTGGTGAGCAAGGTGCAGCTGGACGCCGCCATCCGCT CGATGCTCGTGAACGCCCCGGCCGACCGGACCTGGCGGCGGAGGGGCTGG ATCGTCCTCTGCCGCGCCCGGTGGTTGGCCAGGATAGCCGAGAAGGCGAG GAGGGTTCGGCTGCCGGTGATCGCCCTCTCGACCGGCGGCTTCCGCAGGA GTAGCGGCGGTGCCGACAGGAACGGCGGCGCGCCGTACGGAAAGACGACT GCCAACAAGAAGCGCAAGGGAAAGCGGGGTGATCGAGGAGGAGGAGGAGG AGGACGAGGGGTGGGGGCGGGGGTCGAGGTGGGAGGAGGAGTGGGAGGAG GAGCAGGAGGAGGCAGCGCGGCATTGGCATCAAAGGCGATCCTATCTTCT TCCGGCGGCAACGTGGGCAACAACAAGGGTAAGGGCCAGGCCGTGCCTCG GGAAAAGGGATACGTGGGAAACAGAAGCAAAACCACAAACCCAAACGTTT TCAACGTCAGCGGAAGTAGCGGTGGTGGCGGCGGCGGCGGCGGCGGAAAG CGAGCGGACTCTAAAAATGTTCAAATCGGTGAAAGAACCCGAACCGCCAA GCTGACACTGTTATGCGATGTTGCGAGCTTTCGAAGCAGCAGTCGATCGG GCGGTTCAGAGGCGGCGGAGGCGGCGGCGGTGCTGGCGGCGTTCAGCACG ACGCAGCGGCCGCAGTTGAGGCTCGGACGGGACAGCGTTTTGAGCGAGGA TGCCCCCGTGCCTGGCGTGACTGTGGCGGACAAGGAAAATGAGAAGGAGA AAAAAGAGCAAGAGAAGCTGGGTGCCAAGGGGAAGTCGGGCTTCGTGGCG GCGGTAGAGCGGCTACTGCTCGTGCGAGAGGAGGGCGTTTTCAGAGAGAT CGTGTCCTTCTTGTGA back to top
|