mRNA_H-canaliculatus_F_contig12501.2123.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12501.2123.1
Unique NamemRNA_H-canaliculatus_F_contig12501.2123.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A6H5JEB5_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB5_9PHAE)

HSP 1 Score: 449 bits (1154), Expect = 1.060e-152
Identity = 226/262 (86.26%), Postives = 246/262 (93.89%), Query Frame = 1
Query:    1 GLELPPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
            GLELPPETNSADW+LDLTTSST VQGGKTLT+AY+QR +    SDMAVPTASTVTKTRDRLKGSGSDKSEWVTSF YQLKVLLQRQSRQSRGEVFNSVNL QIF+VA++ASAIWWQS+NV+DIAG+MFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIG+YT AP+L ATAVYWCVGLR E GAF TFLLLFMGQVIVGQS+GLLIST+I+D+FTAQSFSFV +L+LMLFGGFYVN+ N+P GL
Sbjct:  282 GLELPPETNSADWILDLTTSSTIVQGGKTLTQAYQQRTIGPLSSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFGYQLKVLLQRQSRQSRGEVFNSVNLTQIFVVAMMASAIWWQSENVSDIAGTMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGLYTAAPILYATAVYWCVGLRPEAGAFFTFLLLFMGQVIVGQSIGLLISTSIADIFTAQSFSFVLILSLMLFGGFYVNNNNVPEGL 543          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A835YP26_9STRA (ATP-binding cassette superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP26_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.570e-84
Identity = 150/296 (50.68%), Postives = 193/296 (65.20%), Query Frame = 1
Query:    1 GLELPPETNSADWVLDLTTSST---TVQGGKTLTEAYKQRKV-------------------------------EAFPSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
            GLELPP TN+ADWVLDLT  ++    +  G T+T+AY    +                               +       VPTA ++       K      S WVT+F YQL+VLL+RQ +QSRGEVF+ VN+ QI  VAVIASA+W+QS+N++DI G  FFISIQQ+FN L++ MRVFP ERGLM+RERSTGSYRVGPYFLAKS SD+ +Y + P + AT VYWCVGLR    AF+ +L++F+ +++  QS+G+LIS AI D   AQSFSFV VL +MLFGGFYVN++ IP G+
Sbjct:  320 GLELPPATNAADWVLDLTAGTSGNNLLPNGMTITDAYAHGGLMXXXXXXXXXXXXXXXXXXXXXXXXSVAGLDDGALKARGVPTADSIKVAETEFKDKKLSTS-WVTTFWYQLRVLLERQGKQSRGEVFSGVNIFQILAVAVIASAVWFQSNNISDITGVFFFISIQQSFNALSSIMRVFPAERGLMMRERSTGSYRVGPYFLAKSFSDMALYVLFPAIYATLVYWCVGLRPSASAFVVYLVIFLSEIMAAQSVGMLISAAIKDFAAAQSFSFVLVLVIMLFGGFYVNNDRIPQGI 614          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A6U1MQ19_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MQ19_9STRA)

HSP 1 Score: 183 bits (464), Expect = 7.400e-50
Identity = 104/266 (39.10%), Postives = 154/266 (57.89%), Query Frame = 1
Query:    1 GLELPPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVPTASTVTKTRDRLKGSGSDKS---EWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGL-RAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
            GL +PP TN ADW+LD+   ++T + G  L++A+K     +  S+ +   AS ++     L  +G +     +W TSF YQ  VL QR ++QS GE F+ VN+  I + A    A+W+Q+ N+ D+ G +FF+ + Q F+   T  R+FP ER LM+RERSTGSY+VGPYFLAK+ SD+    V P + A  VY   GL    V  F  ++ +F   V+ GQS G   S A++D+  A    F  +L +++ GGFY+    +P GL
Sbjct:  315 GLHVPPLTNPADWLLDVIVGNSTTKDGSELSDAWKSSSDSSDTSECSGAPASHISSEDVTLVENGDEDDAGRKWSTSFWYQFLVLYQRSAKQSSGENFDRVNVLGILLTAACMCAMWFQATNLKDLVGLLFFLVLNQPFSMAATVCRIFPKERSLMMRERSTGSYQVGPYFLAKTCSDLTAGYVVPTIYAIMVYCFCGLYTGSVSHFFLYMAIFWAMVMTGQSYGYFWSAAVTDLPMANMLVFTTILFMVIAGGFYIPMARLPTGL 580          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: R1DY78_EMIHU (ABC transporter domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DY78_EMIHU)

HSP 1 Score: 181 bits (460), Expect = 1.450e-49
Identity = 115/267 (43.07%), Postives = 153/267 (57.30%), Query Frame = 1
Query:    1 GLELPPETNSADWVLDLTTSSTTV-------QGGKTLTEAYKQRKVEAFPSDMA-VPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIP 777
            G  LP  TN ADW++DL              +G            VE   S  A +P+A+       RL GS    S W     +Q  VLL+R ++Q RG+V+N  N+ QI  VAVIA+ +W  +  V+DI G +FF++IQQAFN  NT +R+FP ER LM+RER  G+YR+ PYFLA+S +D     V P+L A  +Y+ VGLR   G F T+L L +  V  GQS+GL IS  I D+  +   SF+FVL +MLFGGFYV  + IP
Sbjct:  273 GEALPSLTNPADWLIDLVDERPAQLLDCWAREGRGDGGAGADGGAVEEASSRRAKLPSAA-------RLAGSHFATSSW-----WQFCVLLERSAKQQRGDVYNLTNIFQILAVAVIAAILWSGATTVSDIKGVLFFVNIQQAFNAQNTVLRLFPLERQLMLRERRCGTYRMLPYFLARSAADSFAILVLPVLYAIIIYFSVGLRPGAGPFFTYLALSLSTVFTGQSIGLFISLLIPDLALSSCVSFIFVLMVMLFGGFYVGVDRIP 527          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A7S4F7N7_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F7N7_CHRCT)

HSP 1 Score: 171 bits (432), Expect = 4.500e-47
Identity = 108/257 (42.02%), Postives = 147/257 (57.20%), Query Frame = 1
Query:    4 LELPPETNSADWVLDL--TTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVP---------------TASTVTKTRDR-LKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFV 720
            L LPP+TN ADW++DL    SS  +   +  +E   Q    +  +D + P               T +T T+T     +G  S  +   TS  +Q +VLL R ++Q RG+V+N  N  QI  VAVIA+ +W    N++D  G +FF++IQQAFN  NT +R+FP ER LM+RER  GSYR+ PYFLAKS SD     V P++ A  +Y+ VGLR E GAF  +L L +  V  GQS+GL+IS A+ D   A   SFV
Sbjct:  157 LRLPPQTNPADWLIDLIDARSSELLDAWRGFSE---QSAKGSGIADGSAPFSGSHGSNGASEHRVTKATGTRTAGAGARGPASANTGPTTSSWFQFRVLLARSAKQQRGDVYNKTNCFQILAVAVIAALLWSGDSNISDRKGVLFFVNIQQAFNAQNTVLRLFPRERSLMLRERRCGSYRMLPYFLAKSASDSVSIFVLPVIYAIIIYFSVGLRREAGAFFVYLALSLSTVFAGQSIGLIISLAVPDFALANCISFV 410          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A7S3XRQ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRQ7_HETAK)

HSP 1 Score: 164 bits (415), Expect = 1.120e-43
Identity = 98/273 (35.90%), Postives = 146/273 (53.48%), Query Frame = 1
Query:   13 PPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPS-DMAVPTASTVTKTRDRLKGSGSD--------------KSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
            P +   ADW LDL  +       K + E    R  +  P+   ++P  +         + SGSD               + W TS A+Q +VLL+RQ ++ RG   N V+  Q   V+ I  A+WWQ++NV DI G +FF++I QAFN +   ++VFP +R L++RER  G YRVG YFLA++ SD     + PML A   Y   G+ +    F T++ LF   ++  Q+ GLL+S+   +V  A   +F  VL L+L GGFYV ++ +PVG+
Sbjct:  168 PADVAPADWALDLL-ADLGADADKLVEEWSSNRSPKEAPAAGDSIPLLA---------RSSGSDGGGDEXXXXXXXXXXTRWATSGAHQFRVLLERQLKEGRGSALNKVSFIQCLAVSAIVCALWWQTNNVNDILGFLFFVTINQAFNVVQAMVKVFPAQRALLVRERGAGYYRVGAYFLARTLSDSLTSYIFPMLYALLCYTGTGVVSSAEDFFTYMALFFSVIMAAQAYGLLLSSMFREVQIATIVAFTSVLALLLIGGFYVENDRLPVGI 430          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: UPI001C4F9FC7 (ABC transporter G family member 25-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F9FC7)

HSP 1 Score: 137 bits (344), Expect = 4.030e-33
Identity = 75/194 (38.66%), Postives = 111/194 (57.22%), Query Frame = 1
Query:  187 GSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSD--NVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVN 762
            GSGS  S W   F     +LLQR  ++ R E FNS+ + Q+ + A++A A+WWQSD  ++ D  G +FFI+I         S+  FP ER + I+ERS+G Y +  YF+A++  DI +  + PM+  T  YW  GL  E GAF+  + + +G V+V Q LGL +   I D   A +   V +L  +L GG+YV+
Sbjct:  372 GSGSSSSSWFNQFT----ILLQRSLKERRHESFNSLRVFQVILAALLAGAMWWQSDFRDIQDRLGFLFFIAIFWGVFPAFNSVFTFPQERAIFIKERSSGMYTLSSYFMARAVGDIPMELILPMVFTTMAYWMAGLMPEFGAFMLTVAVLLGYVLVAQGLGLALGGIIMDAKQASTVVTVTMLAFVLTGGYYVH 561          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A5C7HSG0_9ROSI (ABC transporter domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HSG0_9ROSI)

HSP 1 Score: 136 bits (343), Expect = 5.710e-33
Identity = 76/232 (32.76%), Postives = 125/232 (53.88%), Query Frame = 1
Query:   88 LTEAYKQRKVEAFPSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQS--DNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIP 777
            L  AY++       S++     +  + T+D    +     +W TS+ +Q KVLLQR  R+ R E FN + + Q+  VAV+   +WW +   ++AD    +FF S+   F  L  ++  FP ER ++I+ERS+G YR+  YFLA++  D+ +    P      +YW  GL+A+   F+  LL+ +  V+V QSLGL I   + D+  A + + V  L  ++ GG+Y+  + IP
Sbjct:  347 LVSAYEKNITTRLKSELYNSDVNNYSYTKDASTRNNRKAEQWCTSWWHQFKVLLQRGVRERRFEAFNKLRIFQVISVAVLGGLLWWHTPTSHIADRIALLFFFSVFWGFYPLYNAVFTFPQERTMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVIIIYWMSGLKADPVTFILSLLIVLYSVLVSQSLGLAIGAILMDIKQATTLASVTTLVFLIAGGYYI--QQIP 576          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A1S3ZV93_TOBAC (ABC transporter G family member 21-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S3ZV93_TOBAC)

HSP 1 Score: 134 bits (338), Expect = 3.880e-32
Identity = 71/202 (35.15%), Postives = 118/202 (58.42%), Query Frame = 1
Query:  178 RLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSD--NVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIP 777
            RL     D+++W TS+  Q KVLLQR  ++ + E ++ + + Q+  V+ ++  +WW SD  ++ D  G +FF SI   F  L +++  FP ER ++IRERS+G YR+  Y+ A++  D+ +  + P +  T  YW  GL+  + AFL  LL+ +  V+V Q LGL +   + DV  A + S V +L  +L  G+Y+  ++IP
Sbjct:  521 RLSSRSRDENQWTTSWWLQFKVLLQRGLKERKHESYSGLRIFQVMSVSFLSGLLWWHSDTNHIMDQVGLLFFFSIFWGFFPLFSAIFAFPQERPMLIRERSSGMYRLSSYYFARTVGDLPMELILPTIFVTVTYWMGGLKPSIIAFLLTLLIILLNVLVAQGLGLALGAILMDVKQATTLSSVLMLVFLLASGYYI--QHIP 720          
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A0D6R634_ARACU (ABC transporter domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R634_ARACU)

HSP 1 Score: 134 bits (336), Expect = 6.270e-32
Identity = 70/194 (36.08%), Postives = 114/194 (58.76%), Query Frame = 1
Query:  190 SGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQS--DNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNS 765
            S  +K+EW TS+  Q  VLL+R  ++ R E F ++ + Q+  V+ +A  +WWQS   ++ D  G +FF SI   F  L  ++  FP E  ++I+ERS+G YR+  YF+A++  D+ +  + P +     YW  GLR +  +F   LL+ +  V+V Q LGL +  A+ DV  A + S V +LT +L GG+Y+++
Sbjct:  437 SNCEKNEWATSWWEQFSVLLRRSLKERRHESFGALRIFQVLTVSTLAGLLWWQSKVSHIQDQVGLLFFFSIFWGFFPLFNAIFTFPQESSMLIKERSSGMYRLSSYFVARTVGDLPMELILPTVFVCITYWMGGLRQDARSFALTLLIILYNVLVSQGLGLAMGAALMDVKQATTLSSVTMLTFLLVGGYYIHT 630          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEB5_9PHAE1.060e-15286.26ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YP26_9STRA1.570e-8450.68ATP-binding cassette superfamily n=1 Tax=Tribonema... [more]
A0A6U1MQ19_9STRA7.400e-5039.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
R1DY78_EMIHU1.450e-4943.07ABC transporter domain-containing protein n=3 Tax=... [more]
A0A7S4F7N7_CHRCT4.500e-4742.02Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S3XRQ7_HETAK1.120e-4335.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001C4F9FC74.030e-3338.66ABC transporter G family member 25-like n=1 Tax=Ma... [more]
A0A5C7HSG0_9ROSI5.710e-3332.76ABC transporter domain-containing protein n=1 Tax=... [more]
A0A1S3ZV93_TOBAC3.880e-3235.15ABC transporter G family member 21-like n=4 Tax=Ni... [more]
A0A0D6R634_ARACU6.270e-3236.08ABC transporter domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12501contigH-canaliculatus_F_contig12501:59..3456 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.5
Seed ortholog evalue1.1e-123
Seed eggNOG ortholog2880.D8LI56
KEGG koko:K05681,ko:K21396
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-26_005290.1
Exons5
Model size789
Cds size789
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12501.2123.1prot_H-canaliculatus_F_contig12501.2123.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12501 59..3456 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928966.9130049-CDS-H-canaliculatus_F_contig12501:58..1871622928966.9130049-CDS-H-canaliculatus_F_contig12501:58..187Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 59..187 +
1696845633.2874076-CDS-H-canaliculatus_F_contig12501:58..1871696845633.2874076-CDS-H-canaliculatus_F_contig12501:58..187Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 59..187 +
1622928966.9237397-CDS-H-canaliculatus_F_contig12501:583..7331622928966.9237397-CDS-H-canaliculatus_F_contig12501:583..733Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 584..733 +
1696845633.3013308-CDS-H-canaliculatus_F_contig12501:583..7331696845633.3013308-CDS-H-canaliculatus_F_contig12501:583..733Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 584..733 +
1622928966.9354134-CDS-H-canaliculatus_F_contig12501:1515..18751622928966.9354134-CDS-H-canaliculatus_F_contig12501:1515..1875Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 1516..1875 +
1696845633.3157315-CDS-H-canaliculatus_F_contig12501:1515..18751696845633.3157315-CDS-H-canaliculatus_F_contig12501:1515..1875Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 1516..1875 +
1622928966.9480891-CDS-H-canaliculatus_F_contig12501:2949..30551622928966.9480891-CDS-H-canaliculatus_F_contig12501:2949..3055Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 2950..3055 +
1696845633.3264713-CDS-H-canaliculatus_F_contig12501:2949..30551696845633.3264713-CDS-H-canaliculatus_F_contig12501:2949..3055Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 2950..3055 +
1622928966.962816-CDS-H-canaliculatus_F_contig12501:3412..34561622928966.962816-CDS-H-canaliculatus_F_contig12501:3412..3456Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 3413..3456 +
1696845633.3346803-CDS-H-canaliculatus_F_contig12501:3412..34561696845633.3346803-CDS-H-canaliculatus_F_contig12501:3412..3456Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12501 3413..3456 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12501.2123.1

>prot_H-canaliculatus_F_contig12501.2123.1 ID=prot_H-canaliculatus_F_contig12501.2123.1|Name=mRNA_H-canaliculatus_F_contig12501.2123.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=263bp
GLELPPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVPT
ASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNL
GQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPER
GLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEV
GAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGG
FYVNSENIPVGL*
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mRNA from alignment at H-canaliculatus_F_contig12501:59..3456+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12501.2123.1 ID=mRNA_H-canaliculatus_F_contig12501.2123.1|Name=mRNA_H-canaliculatus_F_contig12501.2123.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3398bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12501:59..3456+ (Hapterophycus canaliculatus Oshoro5f female)
GGCTTGGAACTCCCCCCGGAGACGAACTCGGCCGACTGGGTCCTGGACTT GACCACGTCCTCGACGACCGTGCAGGGCGGAAAAACTCTCACGGAGGCCT ACAAGCAGCGCAAGGTGGAGGCATTCCCGGTGAGGACATAGGCATTTCCC CCTCGATTTTACGCGTCTCCCAGAGTCCGTGTAAGTTTTTAATGTAGAAC ATCACAATAACGTACGAACACCTCGTGGGTACGTCGTGAGAGGCGTGGGT CGACGCTTCTGTTGGGCTCCAAACAGGGAGGGTTTAGTGCCGTGTGGTAC GGTTGGGACGAAAGCATCAACAGAAAAGTCGTCTGTGTGTTGTCGCCGAC TGTTGGACCCCGATCGCTCAACTCGAGTACCCCTTGGTTGTGGGCTTCCG GTGGGCGCCGTTGCTTGTGAAGCGACGCGGCCGGTTGACAGCTCCGTGAC CGCAGAAGCCCACGATCCCGCCTCCTCCGCCCCGTTTCCCGCGTGCTTCT TGCTTGCGACCGGACCGGCGCTCAGTCGGACATGGCGGTGCCCACAGCGT CGACGGTGACCAAGACGAGAGATAGGCTCAAGGGCAGCGGTTCGGACAAG TCCGAGTGGGTGACGTCCTTCGCCTACCAGCTCAAGGTGCTGCTGCAGAG GCAGAGCCGGCAGTCCAGGGGAGAGGTGAGACGCCGTTCAGAAGACGGGA TGAAGGGAGCGCGGCACACGCACACACAGCCGCGCGCGCGCGCGAACGAA CGGACGAATGACGGCGCCTAGCGCCGCGTGGAACGGTACCGTGTCTTTGC GGCGGCGGCGGCGATGGCGGCGGCGGTCGCTGCCGAGTTGTCGCTGTTGC TGTCTCGTTTGTATGCCCCCACGAGTACGCTGACAGAGGAGAAGCGCTCG TTGCCTTCCTCGCGGCCTCGGGGGGTTTCGTAGATGTTGCCGTCTGCGGT GGCGTAACCCCCGTGGCGGCTCTTTCGGTAGCCCTTCCGAGGTGTTGGGA AAAACGGGTCGTGTGGTGATTCTGCAGTTCGCGAGTGTCTCGCGGGTGAG GCCGCGAAGAGATCGCCCGCTTGCCCCCTGTCGACGCCCGCTGTGACGAT CAAATCTGGCGGAAACGGAGGAGGTTGCGGCTTTGTTTGTCTGCTCGATA CCGGATGGGGTTCGAATCTAACCACCAGGCAGTCGGATGACGAGACACGA CCGCACGTGCTATCTAAGCTGGCGAGAAGTGGGTTCGATTCCTGAGCGTG AGTCGTCCTCTTGTCGCTCGGTCTTCGCCCGGCTCGCGACCCCTCTTCGT CCTCGCAAAAATTCTGTGACTGTGCGTGTGCGTGTCTACGATCAGCCGAT TTGACGACCTACCAGACCTACCAGTGTTCCTTATTTTTTTCAACGCCGTG GTCGGTCTGCCTATCCGTCCCCCCCCGCCCGTCCCGTCCATCCCTCCCCC TCCCCAGGTGTTCAACTCCGTAAACCTGGGCCAGATCTTCATGGTCGCCG TGATAGCGTCGGCCATCTGGTGGCAGAGCGACAACGTGGCGGACATCGCC GGCTCCATGTTCTTCATCTCCATCCAGCAGGCGTTCAACGGCCTCAACAC CAGCATGCGAGTGTTCCCCCCCGAGCGAGGTCTCATGATCAGGGAGAGGT CCACCGGCTCGTACCGCGTCGGCCCCTACTTCTTGGCCAAGTCGACCAGC GACATCGGGATCTACACCGTGGCGCCCATGCTCATGGCCACCGCCGTCTA CTGGTGCGTAGGCCTGAGGGCCGAGGTGGGCGCCTTCTTAACCTTCTTGC TGCTCTTCATGGGACAGGTGAGAGACAGGGAGGGCGGGGGCAAGACGCGG AGCCCCGCACGGAGGAATCCGTGTGTTTCTGTGCTGCCTGCTCCGCGCTG CTGGTGTTGGTGCTGGACCGCCGGCCACACCACGCTCGTTGAGCCGGAAA GAGAGCGCTTCGAGCAGCGGCGAAGACAGAGCGAGAAGGACCGGCGAGGG TGTAAACCGTCTCACACCGCCTGATTCGAATTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTATGTGTGTGTGCGTCTTGGACGGAAGCTAT GGATTTTTGAGTTTCGACGTCTCGTCGGGGGACTACTGGCCAGAGGGATA GGGGCATGGTCTTCGAAATCGTCGGCCTCGTGGGCTCAGCTCGTGTGTTG ATGCTTCCGACCGCATACCTCCAGGCGCGACATGTGTCTCGTTTACCGCT TCTTTTCTTCTGCGGGCCTTGGGGTTGTCATATTCAGGCGAAAGAAGGAT TCAGGGAAGGTGGGAGGGGGGGGCTGTTCGTGCCCCGCGGCCGCTGCTAC GCCGCTGCCTTGATGAAGTGTGGGGAAGAGGAAGGAAAGCAGGGGGGTGT GGATAAAAAATAGAGAACGGGGAGGGAGGGGAAGAGGTCGGAGACCTCTC TTGGTGTGTATCTACGGATTGTGTTGGTGGCCTTGCACACCAGCGGGCGT GCCTCCGAGGGGGAGCGTAATTGATCCATGCCAAGGCGGGGTTACAGCTT TTTGGCCCAAAGGGCTTCAAATGGGGGGCGTAAGATGCGGAGGATCAACG TGGAGCACCCAGGCCGCGGCCCTACAAGAAAATGTCCCCCAGACATCCCT AGCCGATTCGATGACTGGTCGCCACCCGCGTTGATTTATCTCCTGAAGTT GAATCATGGATGAGGAACAGGGCTTCAAAGGATTCGGACCGCAAAAAACG TTGGATGCACCCGTATCGTGGCAGGCGCCACTCTTGCGGCTAATTCGAAA CCCTCGCGTTTTTTTCTTGTTTGGATGCATGCACGCCTCCCCCCGTCCCC ACCCCCCACCCCCCACCCCCCCCGTGTACCCTCCCCGAAAGGTCATCGTT GGGCAGAGCCTCGGGCTGCTGATCAGCACGGCGATCTCGGACGTGTTCAC GGCGCAGTCGTTCTCCTTCGTGTTCGTCCTCACTCTCATGCTTTTCGGTG AGGAGCGTAGGGCAAGTCAAGGGGGAGGGGGGAGGGGGGGGGCACGTAGA TTTGTCGTGTCTTCTTGCTCCGTGGTTGTCGTCACGCTCGCTGTCATTGG CGCGCCCGGGGAGTTTTTGACTATGCCGGAACAGACGACGGGGCAAGGCG TCCGTGGGCGGCGGCACCGTAGGACGCCGGCGCAAACGTGACGGTTCACA TCCTCCCACACGCCGCGAGACTGTCGACGCTTGTCCTGTGATTCCGCCTC TTCGACCCCCGGGCGCCAAGGCGTCGACGACAGTCAGCTCCCTTGACATC GCGCCCACCCCTCCGCGTGCCCCCCTTGCTTTCGCGCGCTCGCTCCGACC GAAGGTGGATTCTACGTGAACAGCGAGAACATTCCGGTGGGATTGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12501:59..3456+

>mRNA_H-canaliculatus_F_contig12501.2123.1 ID=mRNA_H-canaliculatus_F_contig12501.2123.1|Name=mRNA_H-canaliculatus_F_contig12501.2123.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1578bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12501:59..3456+ (Hapterophycus canaliculatus Oshoro5f female)
GGCTTGGAACTCCCCCCGGAGACGAACTCGGCCGACTGGGTCCTGGACTT
GACCACGTCCTCGACGACCGTGCAGGGCGGAAAAACTCTCACGGAGGCCT
ACAAGCAGCGCAAGGTGGAGGCATTCCCGGGCTTGGAACTCCCCCCGGAG
ACGAACTCGGCCGACTGGGTCCTGGACTTGACCACGTCCTCGACGACCGT
GCAGGGCGGAAAAACTCTCACGGAGGCCTACAAGCAGCGCAAGGTGGAGG
CATTCCCGTCGGACATGGCGGTGCCCACAGCGTCGACGGTGACCAAGACG
AGAGATAGGCTCAAGGGCAGCGGTTCGGACAAGTCCGAGTGGGTGACGTC
CTTCGCCTACCAGCTCAAGGTGCTGCTGCAGAGGCAGAGCCGGCAGTCCA
GGGGAGAGTCGGACATGGCGGTGCCCACAGCGTCGACGGTGACCAAGACG
AGAGATAGGCTCAAGGGCAGCGGTTCGGACAAGTCCGAGTGGGTGACGTC
CTTCGCCTACCAGCTCAAGGTGCTGCTGCAGAGGCAGAGCCGGCAGTCCA
GGGGAGAGGTGTTCAACTCCGTAAACCTGGGCCAGATCTTCATGGTCGCC
GTGATAGCGTCGGCCATCTGGTGGCAGAGCGACAACGTGGCGGACATCGC
CGGCTCCATGTTCTTCATCTCCATCCAGCAGGCGTTCAACGGCCTCAACA
CCAGCATGCGAGTGTTCCCCCCCGAGCGAGGTCTCATGATCAGGGAGAGG
TCCACCGGCTCGTACCGCGTCGGCCCCTACTTCTTGGCCAAGTCGACCAG
CGACATCGGGATCTACACCGTGGCGCCCATGCTCATGGCCACCGCCGTCT
ACTGGTGCGTAGGCCTGAGGGCCGAGGTGGGCGCCTTCTTAACCTTCTTG
CTGCTCTTCATGGGACAGGTGTTCAACTCCGTAAACCTGGGCCAGATCTT
CATGGTCGCCGTGATAGCGTCGGCCATCTGGTGGCAGAGCGACAACGTGG
CGGACATCGCCGGCTCCATGTTCTTCATCTCCATCCAGCAGGCGTTCAAC
GGCCTCAACACCAGCATGCGAGTGTTCCCCCCCGAGCGAGGTCTCATGAT
CAGGGAGAGGTCCACCGGCTCGTACCGCGTCGGCCCCTACTTCTTGGCCA
AGTCGACCAGCGACATCGGGATCTACACCGTGGCGCCCATGCTCATGGCC
ACCGCCGTCTACTGGTGCGTAGGCCTGAGGGCCGAGGTGGGCGCCTTCTT
AACCTTCTTGCTGCTCTTCATGGGACAGGTCATCGTTGGGCAGAGCCTCG
GGCTGCTGATCAGCACGGCGATCTCGGACGTGTTCACGGCGCAGTCGTTC
TCCTTCGTGTTCGTCCTCACTCTCATGCTTTTCGGTCATCGTTGGGCAGA
GCCTCGGGCTGCTGATCAGCACGGCGATCTCGGACGTGTTCACGGCGCAG
TCGTTCTCCTTCGTGTTCGTCCTCACTCTCATGCTTTTCGGTGGATTCTA
CGTGAACAGCGAGAACATTCCGGTGGGATTGTGAGTGGATTCTACGTGAA
CAGCGAGAACATTCCGGTGGGATTGTGA
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