mRNA_H-canaliculatus_F_contig125.2113.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D8LAU2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI) HSP 1 Score: 194 bits (494), Expect = 1.800e-50 Identity = 109/283 (38.52%), Postives = 160/283 (56.54%), Query Frame = 3
Query: 3156 SLYDMVLGAGDFATVQLVEYHETAAAAKVM-----------------SMPESGANSRASEKIAKIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEETTSMG-----TRGGASWRYGTTLKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQDASL-KDILVRVCRGKRPDVPQETPRQLASLMARCWADRPEDRISFGEVM 3935
++ D +LG G F V L +Y+ AA KV+ S+ S + ++ + + F+ EL AM++L+S +TVNV+GA+T +PD+L+L+ME + GGDL L P + + + D+ GM LHSK +HGDLKS NVLL RAKI DFGT+R + T S G TR S +L W+APEVL+ E ESDV+S+GIV E++++++PW D +D++ V +G RP +P +A +M CWA+ PE R FG +M
Sbjct: 98 TITDDLLGRGGFGEVFLADYNGRNAACKVVHVAHDQGALREIYELGQSVASSHSKTQREQNQRRAFLRELEAMIRLQSPHTVNVYGAVTCLPDRLILVMELLSGGDLRTLLSSCDQPFPEEQSRRIIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKIGDFGTSRWAQHTNSTGLATYTTRSSRSTPM--SLAWSAPEVLEAEGSTYESDVYSFGIVAWEVISKKMPWADKIRPRDVICAVLKGLRPVIPAGATVDIADVMKACWAEEPEARPKFGAIM 378
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI) HSP 1 Score: 206 bits (524), Expect = 2.900e-50 Identity = 115/277 (41.52%), Postives = 166/277 (59.93%), Query Frame = 3
Query: 3150 FFSLYDMVLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIA----KIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEETTSMGTRGGASWRYGTTLK---WAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQDASL-KDILVRVCRGKRPDVPQETPRQLASLMARCWADRPEDRISFGEV-MGLLGTD 3953
+ S+ + +LG G F V L +Y+ AAAKV+ + ++GA ++ + F+ EL AM++LRS TVNV+GA+TS+PD++VL+ME + GGDL L++++ L + ++ RDI GM LH K +HGDLKS NVLL + RAKIADFGT+R + T S G + TTL W+APEVL+ E ESDV+S+GIVV E++ R LPW + +DIL V RG RP + P + + CW P++R +F + MG+ D
Sbjct: 703 YLSITNELLGKGGFGEVYLADYNGHNAAAKVLHIAQTGALDETQKQREASQHRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPGQQSRQIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQTTLMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVICRELPWAKKTRPRDILTAVLRGVRPSFHVDAPADIVYIAKACWCGEPKERTTFRAILMGIKAKD 979
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D8LTP4_ECTSI (Putative Leucine Rich Repeat Protein Kinase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP4_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.990e-49 Identity = 111/269 (41.26%), Postives = 161/269 (59.85%), Query Frame = 3
Query: 3171 VLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIAKIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEETTSMGTRGGASWRY-GTTLKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQD-ASLKDILVRVCRGKRPDVPQETPRQLASLMARCWADRPEDRISFGEVMGLLGTDRQARRS 3971
VLG G F TV L + H AAAKV+S R ++ ++F+ EL AM +LR +TV ++GA+TS+PD+LVL+ME ++GGDL LK+A+ PLE+ V ++ RD+ GM LH+K +HGDLKS NVL RAKIADFGT+ + TT + T G +L WAAPEVL+ + DV+S+G+VV E ++R +PW+ A + +++ V G+RP +P+ P +A+L CW P R +F +V+ D S
Sbjct: 613 VLGRGGFGTVYLADLHGLNAAAKVVS--------REHQRQRRMFMRELEAMKRLRGPHTVTIYGAVTSLPDRLVLVMELLQGGDLRHRLKKAKEPLEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKIADFGTSLWTQHTTRLATYTTKPREMIGMSLPWAAPEVLNRRGSSFKGDVYSFGVVVWECLSREVPWKGVAGVDKLVLAVTAGERPPIPENAPHDIATLAEACWVHDPAARPTFKKVLADFKLDSSNNES 873
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D7G7F2_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F2_ECTSI) HSP 1 Score: 204 bits (518), Expect = 3.640e-49 Identity = 113/277 (40.79%), Postives = 164/277 (59.21%), Query Frame = 3
Query: 3150 FFSLYDMVLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIA----KIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEETTSMGTRGGASWRYGTT---LKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPW-QDASLKDILVRVCRGKRPDVPQETPRQLASLMARCWADRPEDRISFGEVM-GLLGTD 3953
+ S+ D +LG G F V L +Y+ AAAKV+ + GA ++ + F+ EL AM++LRS TVNV+GA+TS+PD++VL+ME + GGDL L++++ L + + RDI GM LH K +HGDLKS NVLL + RAKIADFGT+R + T S G + TT + W+APEVL+ E ESDV+S+GIVV E+++R +PW + +DIL V RG RP + P + + CW P++R +F ++ G+ D
Sbjct: 881 YLSITDELLGKGGFGEVYLADYNGHNAAAKVLHIARMGALDETQKQREASQHRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPGQQSRRIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQTTQMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVISREVPWAKKTRSRDILTAVLRGVRPSFHVDAPADVVDIANACWCGEPKERTTFRAILQGIKAKD 1157
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.530e-48 Identity = 119/289 (41.18%), Postives = 162/289 (56.06%), Query Frame = 3
Query: 3081 RGLLSIPLSEGSVQLTTHQPFY*FFSLYDMVLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIAKIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEET------TSMGTRGGASWRYGTTLKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQD-ASLKDILVRVC-RGKRPDVPQETPRQLASLMARCWADRPEDRISF 3923
R L I + E V +TT VLG G F V L +Y+ G N+ A + K F+ EL AMV+LR+ +TVNV+GAITS+PD+LVL+ME + GGDL A LK + PL + ++ +D+ GM LHSK +HGDLKS NVLL RAKI DFGT+R + T + T G S + W APEVL+ + SDV+S+G+V E++TR+ PW D A +DI +RV R +RP +P + P +A ++ CWA PEDR +F
Sbjct: 826 RKLDQIEIPEEHVSITTE------------VLGKGGFGVVYLADYN--------------GHNAAAKKAERKAFLRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSAHI--SFAWTAPEVLESKETSTASDVYSFGMVAWEVLTRQTPWADQARPRDIYLRVVMREERPAIPADAPVDIAEMVRSCWAQEPEDRPTF 1086
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D8LTP7_ECTSI (Two component regulator three Y domain protein/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP7_ECTSI) HSP 1 Score: 199 bits (507), Expect = 1.640e-48 Identity = 108/253 (42.69%), Postives = 156/253 (61.66%), Query Frame = 3
Query: 3171 VLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIAKIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEETTSMGTRGGASWRY-GTTLKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQD-ASLKDILVRVCRGKRPDVPQETPRQLASLMARCWADRPEDRISF 3923
VLG G F TV L + H AAAKV+S R ++ ++F+ EL AM +LR +TV ++GA+TS+PD+LVL+ME ++GGDL LK+A+ PLE+ V ++ RD+ GM LH+K +HGDLKS NVL RAKIADFGT+ + +T + T G +L WAAPEVL+ E DV+S+G+VV E ++R +PW+ A + +++ V G+RP +P+ P +A+L CW P R +F
Sbjct: 602 VLGRGGFGTVYLADLHGLNAAAKVVS--------REHQRQRRMFMRELEAMKRLRGPHTVTIYGAVTSLPDRLVLVMELLQGGDLRHRLKKAKEPLEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKIADFGTSLWTQHSTRLATYTTKPREMVGMSLPWAAPEVLNRRGSSFEGDVYSFGVVVWECLSREVPWKGVAGVDKLVLAVTAGERPPIPENAPHDIAALAEACWVHDPAARPTF 846
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE) HSP 1 Score: 199 bits (505), Expect = 3.400e-48 Identity = 112/273 (41.03%), Postives = 162/273 (59.34%), Query Frame = 3
Query: 3150 FFSLYDMVLGAGDFATVQLVEYHETAAAAKVM-------SMPESGANSRASEKIAKIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEETTSMGTRGGASWRYGTT---LKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQDASL-KDILVRVCRGKRPDVPQETPRQLASLMARCWADRPEDRISFGEVM 3935
+ S+ D +LG G F V L +Y+ AAAKV+ ++ E+ E+ + F+ EL AM++LRS TVNVFGA+TS+PD++VL+ME + GGDL L++++ L + + + RDI GM LHSK +HGDLKS NVLL RAKIADFGT+R + S G + TT + W+APEVLD E+ ESDV+S+GIVV E+++R LPW + + ++L V RG RP P + + CW P++R +F ++
Sbjct: 618 YLSITDELLGKGGFGEVYLADYNGHNAAAKVLYIAHDVGALDENQKQRETRER--RAFLRELEAMIRLRSLNTVNVFGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPEEQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIADFGTSRWTQTINSTGLTTYTTKSSQTTQMSIAWSAPEVLDSEKSSYESDVYSFGIVVWEVLSRELPWANKTRPSEVLTAVLRGIRPSFHVGAPADIVDIAKACWCGEPKERTTFRAIL 888
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D7FLJ2_ECTSI (TKL family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI) HSP 1 Score: 200 bits (508), Expect = 5.730e-48 Identity = 117/289 (40.48%), Postives = 160/289 (55.36%), Query Frame = 3
Query: 3081 RGLLSIPLSEGSVQLTTHQPFY*FFSLYDMVLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIAKIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIEET------TSMGTRGGASWRYGTTLKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQD-ASLKDILVRVC-RGKRPDVPQETPRQLASLMARCWADRPEDRISF 3923
R L I + E V +T +LG G F V L +Y+ G N+ A + K F+ EL AM++LRS +TVNV+GAITS+PD LV++ME + GGDL A LK + PL + + ++ +D+ GM LHSK +HGDLKS NVLL RAKI DFGT+R + T + T G S + W APEVL+ + SDV+S+G+V E++TRR PW D A +DI +RV R +RP +P TP + ++ CWA PEDR +F
Sbjct: 882 RKLDQIEIPEDHVSITNE------------MLGKGGFGVVYLADYN--------------GHNAAAKKAERKAFLRELDAMIRLRSPHTVNVYGAITSLPDGLVMVMELLAGGDLRAMLKNSEQPLPEDMCRQIIQDVCAGMTFLHSKSTVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTDRSTGLATYTTNPGPSAHI--SFAWTAPEVLESQETSKASDVYSFGMVAWEVLTRRTPWADQARPRDIYLRVVMREERPAIPANTPVDITEMVRSCWAQEPEDRPTF 1142
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: D7G7X9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI) HSP 1 Score: 198 bits (503), Expect = 3.610e-47 Identity = 113/285 (39.65%), Postives = 158/285 (55.44%), Query Frame = 3
Query: 3081 RGLLSIPLSEGSVQLTTHQPFY*FFSLYDMVLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIAKIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAKIADFGTARTIE---ETTSMGTRGGASWRYGTTLKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQDASLKDILVRVC-RGKRPDVPQETPRQLASLMARCWADRPEDRISF 3923
R L I + E V +T D +LG G F V L +Y+ G N+ A + K F+ EL AM++LRS + VN++GAITS+PD+L+L+ME + GGDL A LK + PL K ++ +D+ GM LH K +HGDLKS NVLL RAKI DFGT+R E ET + T G S + W APEVL+ + DV+S+G+V E++TR+ PW A +DI + V R +RP +P P +A ++ +CWA P+DR +F
Sbjct: 1109 RKLDQIEIPEDHVSIT------------DEMLGKGGFGVVYLADYN--------------GHNAAAKKAERKAFLRELDAMIRLRSPHIVNIYGAITSLPDRLILVMELLAGGDLRAMLKNSEQPLPKDKCRQIIQDVCVGMAFLHGKATVHGDLKSANVLLDDRGRAKIGDFGTSRWAERSAETVTNNTNPGPSTHI--SFAWTAPEVLETKETSKAGDVYSFGMVAWEVLTRQTPWDQARPRDIYLGVVMREERPAIPAGAPVDIAEMVRKCWAQEPKDRPTF 1365
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE) HSP 1 Score: 196 bits (497), Expect = 8.120e-47 Identity = 116/284 (40.85%), Postives = 163/284 (57.39%), Query Frame = 3
Query: 3171 VLGAGDFATVQLVEYHETAAAAKV-------------MSMPESGANSRASEKIA-KIFVNELHAMVQLRSAYTVNVFGAITSVPDKLVLIMEFMEGGDLPAFLKEARHPLEKPVAYELARDIARGMQLLHSKKAIHGDLKSPNVLLTRENRAK------IADFGTARTIEET------TSMGTRGGASWRYGTTLKWAAPEVLDDERVRAESDVFSYGIVVREIVTRRLPWQD-ASLKDILVRVC-RGKRPDVPQETPRQLASLMARCWADRPEDRISFGEVMG 3938
+LG G F V L +Y+ AAAKV ++ P+SG EK+ K F+ EL AM++LR +TVNV+GAITS+PD+L+L++E + GGDL LK + PL + + ++ +DI GM LHSK +HGDLKS N+LL RAK I DFGT+R + T + T G S + W APEVL+ E SDV+S+GIVV E+++R+LPW D A +DI +RV G RP +P + P +A ++ CWA P +R +F + G
Sbjct: 760 MLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGRRDDVLNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKARWACGIGDFGTSRWTQNTERSTGLATYTTNPGPSTHI--SFAWTAPEVLEKETTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPAIPADAPVDIAEILLGCWAQEPTERPTFQALSG 1041 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig125.2113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig125.2113.1 >prot_H-canaliculatus_F_contig125.2113.1 ID=prot_H-canaliculatus_F_contig125.2113.1|Name=mRNA_H-canaliculatus_F_contig125.2113.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=280bp MVLGAGDFATVQLVEYHETAAAAKVMSMPESGANSRASEKIAKIFVNELHback to top mRNA from alignment at H-canaliculatus_F_contig125:3303..10140- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig125.2113.1 ID=mRNA_H-canaliculatus_F_contig125.2113.1|Name=mRNA_H-canaliculatus_F_contig125.2113.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6838bp|location=Sequence derived from alignment at H-canaliculatus_F_contig125:3303..10140- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig125:3303..10140- >mRNA_H-canaliculatus_F_contig125.2113.1 ID=mRNA_H-canaliculatus_F_contig125.2113.1|Name=mRNA_H-canaliculatus_F_contig125.2113.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1680bp|location=Sequence derived from alignment at H-canaliculatus_F_contig125:3303..10140- (Hapterophycus canaliculatus Oshoro5f female)back to top |