mRNA_H-canaliculatus_F_contig1240.2038.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-canaliculatus_F_contig1240.2038.1
Unique Name	mRNA_H-canaliculatus_F_contig1240.2038.1
Type	mRNA
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1240.2038.1 vs. uniprot
Match: A0A6H5KHG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG8_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 7.060e-21
Identity = 80/199 (40.20%), Postives = 97/199 (48.74%), Query Frame = 1

Query: 2848 LGLSAAAAGGVLCLYWADLGDNGGRWVLDDDLSLSNGVLAVTNGPAPAAADLAFVNHEHEHSHRGSRALASGRTRIGGKTESGSSGRVDALAEVEGSGAPDRIAVSEKXXXGRRDEISPNRPGEGAEHGIAGFGGGGARDGVTTDETEDAAVVGSPVSLPWSPAVSGAK--AHPSWLLDSPRMQGWVEADDMFVLCETD 3438
            L L  AA GG LCLYW++   +GGRWVLDDDL LSNGV+ VT  PAP  ADLAF++  H            GR    G T  G  G  D   E  G+    R   + +  X     ++  R G  A         GGA              VG P       A+  +   AH +WLLDSPR+QGWV+ADDM V+CETD
Sbjct:  465 LSLPEAADGGTLCLYWSEA--DGGRWVLDDDLRLSNGVVGVTEDPAPPEADLAFLDQRHR-----------GRPPQAGATSDGEGGAGDGDRE-RGT----RSGFASEDEXXXXXXVAVEREGGDASEEKVSVESGGA-------------TVGGPEGAVGGRALESSMEAAHRAWLLDSPRLQGWVKADDMVVVCETD 632

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1240.2038.1 vs. uniprot
Match: D7FUF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF3_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.280e-16
Identity = 77/206 (37.38%), Postives = 95/206 (46.12%), Query Frame = 1

Query: 2848 LGLSAAAAGGVLCLYWADLGDNGGRWVLDDDLSLSNGVLAVTNGPAPAAADLAFVNHEHEHSHRGSRALASGRTRIGGKTESGSSGR-------VDALAEVEGSGAPDRIAVSEKXXXGRRDEISPNRPGEGAEHGIAGFGGGGARDGVTTDETEDAAVVGSPVSLPWSPAVSGAK--AHPSWLLDSPRMQGWVEADDMFVLCETD 3438
            LGL   A GG LCLYW++   +GGRWVLDDDL LSNGVL VT  PAP  ADLAF++  H    RGS   A   +   G       GR                 GA +       XXX                 G A        + V+ +       VG P       A+  +   AH +WLLDSPR++GWV+ADDM V+CET+
Sbjct:  462 LGLPQVADGGTLCLYWSEA--DGGRWVLDDDLRLSNGVLGVTEDPAPPEADLAFLDQRH----RGSPPQAGAASEDEGGAGDADRGRGTRSXXXXXXXXXXXDGGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXVGFA------CEEEVSVES--GGTTVGGPEGAAGGRALESSMEAAHRAWLLDSPRLRGWVKADDMVVVCETE 653

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1240.2038.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1240.2038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KHG8_9PHAE	7.060e-21	40.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FUF3_ECTSI	1.280e-16	37.38	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1240	contig	H-canaliculatus_F_contig1240:3621..9520 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-03_000420.1
Exons	1
Model size	5900
Cds size	2982
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1240.2038.1	prot_H-canaliculatus_F_contig1240.2038.1	Hapterophycus canaliculatus Oshoro5f female	polypeptide	H-canaliculatus_F_contig1240 4086..7067 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928955.2904587-UTR-H-canaliculatus_F_contig1240:3620..4085	1622928955.2904587-UTR-H-canaliculatus_F_contig1240:3620..4085	Hapterophycus canaliculatus Oshoro5f female	UTR	H-canaliculatus_F_contig1240 3621..4085 +
1696845628.517382-UTR-H-canaliculatus_F_contig1240:3620..4085	1696845628.517382-UTR-H-canaliculatus_F_contig1240:3620..4085	Hapterophycus canaliculatus Oshoro5f female	UTR	H-canaliculatus_F_contig1240 3621..4085 +
1622928955.3160455-UTR-H-canaliculatus_F_contig1240:7067..9520	1622928955.3160455-UTR-H-canaliculatus_F_contig1240:7067..9520	Hapterophycus canaliculatus Oshoro5f female	UTR	H-canaliculatus_F_contig1240 7068..9520 +
1696845628.535758-UTR-H-canaliculatus_F_contig1240:7067..9520	1696845628.535758-UTR-H-canaliculatus_F_contig1240:7067..9520	Hapterophycus canaliculatus Oshoro5f female	UTR	H-canaliculatus_F_contig1240 7068..9520 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928955.3037612-CDS-H-canaliculatus_F_contig1240:4085..7067	1622928955.3037612-CDS-H-canaliculatus_F_contig1240:4085..7067	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig1240 4086..7067 +
1696845628.5265915-CDS-H-canaliculatus_F_contig1240:4085..7067	1696845628.5265915-CDS-H-canaliculatus_F_contig1240:4085..7067	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig1240 4086..7067 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-canaliculatus_F_contig1240:3621..9520+
coding sequence from alignment at H-canaliculatus_F_contig1240:3621..9520+

protein sequence of mRNA_H-canaliculatus_F_contig1240.2038.1

>prot_H-canaliculatus_F_contig1240.2038.1 ID=prot_H-canaliculatus_F_contig1240.2038.1|Name=mRNA_H-canaliculatus_F_contig1240.2038.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=994bp
MVGPPHRQHRPPPPPPSPPPPPSAAPAELSSPLAWPSTKEPALQEMVRAK
KRRQTATTVADEIAQTQPTAVRKFSVARERDGNGVESSEAFATTGGGATA
TSMAGGATEIGSGNMVGGTPPRRIGSGPSSWLGVGGLTPKSSECEEDGEV
GLAHRGGGTPAATAAAADDDDDDDDDDDDDDTPGGEGASFTNCRRQRETL
AAAAAAAAATHAEEVGRQEPQEPTETANGAPAVEAGDGGKGGGSAPQAAG
EAQSPPAASNEDRRRVSNGLTARPATVKHAMPLTLASGASLSSSPASANT
AATAGVTVAGTAPSPARGETTAEGEQRRRRRRGQQRLQRLPTFGATPAAF
AQTLGSAESSLAMLSGSGNDEHDDRATALRAALSAKAARSACESLAWSKA
GSALGGARRGDDGNCDTDAAWEGVQGGEALGARVASLSSTGGVKADSSSG
AGYVSAAEREAGVMAGATAEAADVSKEPSLGGCARDGRNEEVRHDDRLLP
DGHLGRRPSWPISAAAAKATAAMEETWREAEGEGIIHSGSNSSNSSSRVG
ASTAGGSQPAPALRCRRLVLSGKDVPALWTGRYTLQDEGADEDNGRDDDD
DDDSDADDLEEASEAGGDSRTPYAEAPHYCLDTSLRPDANAAAAVAGGRA
RPSREDKAETKTDEPGEGPRTSPRQAWFDDEGRCPAGVGALSAPWPEKRV
LAAAGAAGAVGAAGAAEAGYVRFATAAMAAPEPGLPQTTAPGTATASAAE
DAAADAATAEVELELDAVFSGARAATTTATTASASPAHNEPEDGLGLSAA
AAGGVLCLYWADLGDNGGRWVLDDDLSLSNGVLAVTNGPAPAAADLAFVN
HEHEHSHRGSRALASGRTRIGGKTESGSSGRVDALAEVEGSGAPDRIAVS
EKGGGGRRDEISPNRPGEGAEHGIAGFGGGGARDGVTTDETEDAAVVGSP
VSLPWSPAVSGAKAHPSWLLDSPRMQGWVEADDMFVLCETDCK*

mRNA from alignment at H-canaliculatus_F_contig1240:3621..9520+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-canaliculatus_F_contig1240.2038.1 ID=mRNA_H-canaliculatus_F_contig1240.2038.1|Name=mRNA_H-canaliculatus_F_contig1240.2038.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5900bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1240:3621..9520+ (Hapterophycus canaliculatus Oshoro5f female)
GGTGGGGTCGAGGGTGGGAGCTGCGGCAGCATTCAGTGCAAGAGACGGCT
TCTTCCGGAGTGGGATTGCGGCGCGAGCGCAGGCGCAGGACGCGTTGGAC
ATTCGACCGTCGAAGGGGCGCTTGGACGTCGGGTTGGCGTTACGCACTAT
CGCCGATGCTGTAGCAGTAGCTCGGCGTTCAAGGACAGGCGCGGCGTTGC
CTCAGAGATACAAGTATCAAACCGGGAGGGAAGCAGCAGCGTCGCTGCCG
CCCGAACGGGTTCGTTCACTAGCGCCTCGGGGCGCCGCGGTGTGGATGAG
GGCGAGCCGGACCGAGCCGTTCGCCTCAAGGACAAGCAAGAAGAGCAAAC
AGAGTGCGCCGGAATTAACGGCGGCGGTTGCAGCAGCAGCTGTAGAGGTG
TACTTTCTGCTGCCGGGCTCTCTTTGCTTGCCGTGGTGGCTATCGCGGCC
TTCGCAACCGGGACCATGGTGGGCCCTCCTCATCGGCAGCACCGGCCACC
GCCGCCGCCGCCCTCGCCACCGCCACCGCCCTCAGCTGCGCCGGCGGAAC
TCTCCTCGCCTTTGGCGTGGCCCTCGACCAAGGAACCCGCGCTGCAGGAG
ATGGTGCGCGCCAAGAAGAGGAGGCAGACCGCAACGACTGTCGCGGACGA
AATCGCGCAGACGCAACCGACGGCTGTGCGGAAATTTTCCGTGGCTAGGG
AGAGAGATGGGAACGGGGTGGAGAGCTCTGAAGCATTTGCTACGACCGGA
GGGGGCGCCACGGCAACGAGCATGGCTGGAGGGGCGACCGAAATCGGTTC
AGGAAACATGGTAGGCGGCACCCCGCCGCGGCGGATCGGGAGCGGTCCGT
CCAGCTGGCTTGGGGTAGGAGGCTTGACCCCCAAATCAAGCGAGTGCGAA
GAAGACGGCGAGGTTGGTTTGGCCCATCGTGGTGGTGGTACTCCTGCTGC
TACTGCTGCTGCTGCTGATGATGATGATGACGATGACGATGACGATGATG
ATGATGATACACCCGGCGGCGAAGGGGCATCCTTCACAAATTGCCGTAGA
CAGCGGGAGACATTAGCAGCAGCAGCAGCAGCAGCAGCAGCGACGCACGC
CGAAGAAGTCGGGCGGCAAGAACCACAAGAACCAACAGAAACGGCAAACG
GTGCTCCCGCCGTGGAGGCGGGTGATGGCGGAAAGGGAGGTGGGTCGGCA
CCACAAGCGGCGGGGGAAGCGCAGTCGCCACCCGCGGCGTCAAATGAAGA
CCGCCGGCGTGTGTCGAACGGCCTTACAGCCCGTCCCGCGACGGTCAAGC
ATGCGATGCCGCTCACGTTAGCGAGCGGTGCGTCTCTATCCTCCTCCCCC
GCTTCCGCCAACACCGCTGCTACTGCTGGCGTTACCGTTGCTGGTACTGC
TCCCAGCCCCGCCAGAGGCGAGACAACAGCAGAGGGCGAGCAGAGACGGC
GGCGGCGGCGCGGGCAGCAGCGGCTCCAGCGGTTGCCGACCTTCGGTGCC
ACTCCTGCTGCTTTCGCCCAGACCCTCGGGTCGGCCGAGAGCAGCCTGGC
GATGCTTTCGGGTAGCGGGAACGACGAGCACGACGACCGAGCGACCGCTT
TGCGCGCGGCCCTGTCCGCGAAGGCCGCGCGCTCTGCCTGCGAGTCCCTA
GCCTGGAGCAAAGCCGGGTCGGCGCTGGGGGGGGCGCGCCGAGGCGACGA
CGGAAACTGCGACACCGACGCAGCCTGGGAAGGTGTCCAAGGAGGAGAAG
CTCTCGGTGCACGAGTGGCCTCTCTATCATCTACCGGGGGTGTCAAGGCG
GACAGCTCGTCAGGGGCGGGGTACGTATCTGCTGCCGAACGCGAGGCAGG
GGTGATGGCGGGCGCGACCGCGGAGGCGGCAGACGTGTCAAAGGAACCAT
CCCTCGGGGGATGCGCACGGGATGGTAGGAACGAAGAGGTCAGGCACGAC
GATAGGCTTTTGCCCGATGGTCACCTTGGGCGGAGGCCCTCGTGGCCAAT
TTCGGCGGCGGCGGCGAAGGCTACGGCGGCGATGGAAGAAACTTGGCGAG
AGGCGGAAGGGGAGGGAATTATCCACAGCGGCAGCAACAGCAGCAACAGC
AGTAGTCGTGTCGGCGCCAGTACCGCGGGCGGTAGCCAACCGGCACCCGC
CCTTCGGTGCCGCCGTCTGGTCCTCTCGGGCAAGGACGTCCCCGCCCTGT
GGACTGGACGGTATACCCTGCAGGACGAGGGCGCCGACGAGGACAACGGC
CGCGACGACGACGACGACGACGACAGCGACGCGGACGATCTAGAAGAAGC
CTCGGAGGCGGGCGGCGACTCCCGCACACCGTACGCAGAAGCGCCGCACT
ACTGCCTGGACACCTCCCTGCGCCCTGATGCCAACGCCGCCGCTGCCGTT
GCCGGAGGTCGGGCCCGCCCTTCGCGGGAGGACAAGGCAGAGACAAAGAC
AGACGAACCAGGAGAGGGGCCGCGAACGTCTCCGCGGCAAGCCTGGTTTG
ACGACGAAGGGCGGTGTCCTGCAGGGGTAGGCGCCCTTTCTGCCCCCTGG
CCGGAAAAAAGAGTCCTCGCCGCTGCTGGGGCTGCTGGGGCTGTAGGGGC
TGCTGGGGCTGCTGAGGCTGGGTACGTTCGTTTCGCCACGGCGGCGATGG
CAGCGCCCGAGCCGGGCTTGCCGCAGACGACAGCTCCTGGTACTGCTACT
GCCTCCGCCGCCGAAGACGCCGCCGCAGACGCCGCTACAGCAGAAGTGGA
GCTTGAGCTTGACGCCGTTTTTTCCGGCGCACGAGCGGCGACGACGACGG
CGACGACGGCTTCCGCTTCTCCAGCGCACAACGAACCGGAAGACGGCCTT
GGTCTGTCGGCAGCCGCGGCGGGCGGGGTGCTGTGTCTGTACTGGGCCGA
CCTCGGAGACAACGGGGGGCGCTGGGTGCTCGACGACGACCTCAGCCTTT
CCAACGGAGTGCTCGCCGTCACCAACGGCCCTGCACCTGCCGCCGCAGAC
CTGGCGTTTGTCAACCACGAGCATGAGCATAGCCACCGAGGTTCTCGGGC
GTTGGCCAGCGGGAGGACGAGGATAGGTGGCAAGACCGAAAGCGGTAGTT
CAGGCCGGGTCGATGCCCTTGCCGAGGTGGAAGGAAGCGGTGCACCAGAT
AGAATCGCGGTTAGCGAGAAAGGAGGCGGTGGCCGAAGAGACGAGATTAG
CCCGAACAGGCCGGGAGAGGGCGCTGAACACGGGATTGCTGGCTTCGGAG
GGGGTGGCGCTCGAGACGGCGTTACCACCGATGAAACGGAAGACGCCGCA
GTGGTGGGTTCTCCGGTATCGTTGCCTTGGTCGCCGGCGGTGTCGGGGGC
GAAAGCGCACCCGAGTTGGCTGCTCGATTCCCCCCGGATGCAAGGGTGGG
TGGAGGCCGACGATATGTTTGTTTTGTGTGAGACGGATTGTAAGTGAACG
TGGAACAGTCCATTCCTGCTGTTGGTGTTGGTATCGATGTGAGTGTTCGT
GTTCGTGCTGATGGTGGTTGTGGTTGTTTTGAGTTTGGCGGTGCTGTTGT
TTTTGCATGGTAGACTCCGGTGTGGCCTCCCCCCCCACAAGCACGTGTTG
TTTTGCGTCCTGATCCTGCCGGGTAGAGGTGACAACCGCGGCCGCAACCT
GCCCAAAAGAACGAAAAACGCTCTAGTTCAAGTCTCGTCCTTGTGTCTTA
AACCTGGTGCGCGAAGTTGTGCCACATGGCAATCGCATGGTCTCAAGGCA
CGTAAGTAGGCGAAACTCATCACCGTATGGTTTCAAGGCACGTAAGCAGG
CGAAACTCATCACGTTCAAAGGAGAGGCGCAGACGAGAGGCGTGTAGTGC
TCTACTACTGCCTCCATCCGAGGAAGTACCGTAGCAGTCGTAGATGTGGT
ACTTAAATTCGCGACCGCTCCTCTTCCCGTCTGGAGGGGTTGTTTCTTTG
TTTGCGTCGCGACAACAAGAGGGCGTGCTTTTGCGGCAATGGTTGGTGGC
GAGAGAGAGGTGGTGGGTGGTGGGACCAGGAATGCAAAAAATAAGTTCAC
CCGTGATGGACTGGTGTGGTAGTGGAAAAACCTTGTGGAGGGTGTACCCT
TTTCCACGCTACGAAAGAAAAAGAGTCAACCACACAGAATTTCCCTGTTT
TGTTTTGTTCTTCATTTTATGACACGCGAGGGCATGCCTGTTTCGGGGTT
GAACCTAAGTGTCTCTCCGTGTGTAGTAGAAGGGAAGGCTCCGTCTGGAT
TGTAAAATGGTGTGGGGCCGGATGTTGCGAGGGTCTGGCCAAGCAGCAGC
ACCACCACCAAAAAGAGAAAATGGGATACTGTACCATGAAGGCTCAGACT
GATGGGCGACGGGGGTGCGTGATTTTGCGGCCGTTCTATCGAAGGAGGGG
CTCCGTAAAATCACGCCTTTCGATCCGTCGAATCGCGCTCGCTCGTGGGC
CAGGATCCAAAACAGCGAGCGACACGGTTCAGTAATGGCGGGAAATGGGT
AGCGATCGAACTATGAGAAACTGTGTGTGTGTGTGTGTGTGTGTCGTGAG
GAATCTGTTAAAGATAGCTACTTTGGCCATGCAGTCTGAGTCGCCCGTGG
TGCTTTGTGTTGTCGCGGAGCCTTAGCCTTTCCGAATGTCCGGCTTTACT
TTCTGTCTTGGTTTTTTTTTTGCAACAATTTTATGAGACCCTGTGTTGTT
GTTTGCTCGTGCTGTTCGTTGTCCTCGACGAGGATCGATCGAGACGTGAG
TGTTGCACCGGCGGCGCGATGATGCTTCCTCTCGCGGGTTGCGGTGCATT
GCCATGGGCGGTCGAGGCATTCGGCGTCGACCGCGCCAACAGACCCATCA
GCATGTGCTGGAATTGTGTGTGTCCATCTGTATGCGATCGTGTGTTCACC
ACGTGTTTGCTGTATCTACTGACACTAGCAGCAAGCCTGGTTTTTGCCTG
GTTTTTTCGCTTCTCAGGCTGGCCGGGCCCCTGGGTGAGCAGTGCTGTGC
GCGTTTTTCCCCGACGAGCTCTGAAAATATTTCCGTCCATTTTCGTAGCG
CTGTATTTTGGTGGTTTGCTTTCTTTAATGCGCTCTTTACCGTCCGGGGG
GGGGTCACACAGATGTACGCTACTCACCCACCCGGCATTTCTAGTCTTTC
ATGGCGTTCAGGCAATGGGGTATGACTATATAAATTTTATGGGGTCATAC
CCCATTGCGTATACTGTACGTGTGTTTGCGTGTTGGGGTTGGCAGGTGAA
CATGAAGGCGTTTTTTCGTCGCTGCCTCGCGCGTGCCGTGCGTTTGTGTT
TCAGTCGGGGTCTTGGTGCGTGTATGACGTTCTTCTGGTTTACCATGGTT
CATATTTTGCGATCAGGGCGTGGGTGGCGGCCATCGTGCGGTTTACAGTT
TCGCGTTCGTTCGTCGGTGGGGATCGTTTCTTGGACAAACCGGTATGAAC
GAGGTCAAGTTTGCTCGCCCTTTCCTGACCAACTAGGCCGCTTTTTGTCT
TCCCGAATAGAACACTCGTATCTTGCACCTTGCCACGGTCGTGTGTCCTT
CAACGAAGGGATGGACCCCTCTTGCTCTTTGTGGTGAATTCATGACGCAG
CTTTAGTGCCAGGGTCGATGGCGTATCGGGGGTACAGAACCGTCGTGGAA
TACTTCCGACAGTGTTGTCGAGGGTCATGCTTGAGTATAGTGCCCTCCGA
GGGTTGGACTTGAAGTGGTTCTTACGCTTCGTCGTCTACATCCGGTGGGT
TTTTAACAAGGATCGAGGCTTTTTCAAGGCGGCTTTCCCACCTCGAACCC
CGGTTGAAATGCCGGCCACGTGAACAGCCCTCCGTCGAGTAATGTGCATA
TCGTGTCAAGTATATGATAGAGCAATAAAAATATCGAAACCATGAAACAA

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1240:3621..9520+

>mRNA_H-canaliculatus_F_contig1240.2038.1 ID=mRNA_H-canaliculatus_F_contig1240.2038.1|Name=mRNA_H-canaliculatus_F_contig1240.2038.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5964bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1240:3621..9520+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGGGCCCTCCTCATCGGCAGCACCGGCCACCGCCGCCGCCGCCCTC
GCCACCGCCACCGCCCTCAGCTGCGCCGGCGGAACTCTCCTCGCCTTTGG
CGTGGCCCTCGACCAAGGAACCCGCGCTGCAGGAGATGGTGCGCGCCAAG
AAGAGGAGGCAGACCGCAACGACTGTCGCGGACGAAATCGCGCAGACGCA
ACCGACGGCTGTGCGGAAATTTTCCGTGGCTAGGGAGAGAGATGGGAACG
GGGTGGAGAGCTCTGAAGCATTTGCTACGACCGGAGGGGGCGCCACGGCA
ACGAGCATGGCTGGAGGGGCGACCGAAATCGGTTCAGGAAACATGGTAGG
CGGCACCCCGCCGCGGCGGATCGGGAGCGGTCCGTCCAGCTGGCTTGGGG
TAGGAGGCTTGACCCCCAAATCAAGCGAGTGCGAAGAAGACGGCGAGGTT
GGTTTGGCCCATCGTGGTGGTGGTACTCCTGCTGCTACTGCTGCTGCTGC
TGATGATGATGATGACGATGACGATGACGATGATGATGATGATACACCCG
GCGGCGAAGGGGCATCCTTCACAAATTGCCGTAGACAGCGGGAGACATTA
GCAGCAGCAGCAGCAGCAGCAGCAGCGACGCACGCCGAAGAAGTCGGGCG
GCAAGAACCACAAGAACCAACAGAAACGGCAAACGGTGCTCCCGCCGTGG
AGGCGGGTGATGGCGGAAAGGGAGGTGGGTCGGCACCACAAGCGGCGGGG
GAAGCGCAGTCGCCACCCGCGGCGTCAAATGAAGACCGCCGGCGTGTGTC
GAACGGCCTTACAGCCCGTCCCGCGACGGTCAAGCATGCGATGCCGCTCA
CGTTAGCGAGCGGTGCGTCTCTATCCTCCTCCCCCGCTTCCGCCAACACC
GCTGCTACTGCTGGCGTTACCGTTGCTGGTACTGCTCCCAGCCCCGCCAG
AGGCGAGACAACAGCAGAGGGCGAGCAGAGACGGCGGCGGCGGCGCGGGC
AGCAGCGGCTCCAGCGGTTGCCGACCTTCGGTGCCACTCCTGCTGCTTTC
GCCCAGACCCTCGGGTCGGCCGAGAGCAGCCTGGCGATGCTTTCGGGTAG
CGGGAACGACGAGCACGACGACCGAGCGACCGCTTTGCGCGCGGCCCTGT
CCGCGAAGGCCGCGCGCTCTGCCTGCGAGTCCCTAGCCTGGAGCAAAGCC
GGGTCGGCGCTGGGGGGGGCGCGCCGAGGCGACGACGGAAACTGCGACAC
CGACGCAGCCTGGGAAGGTGTCCAAGGAGGAGAAGCTCTCGGTGCACGAG
TGGCCTCTCTATCATCTACCGGGGGTGTCAAGGCGGACAGCTCGTCAGGG
GCGGGGTACGTATCTGCTGCCGAACGCGAGGCAGGGGTGATGGCGGGCGC
GACCGCGGAGGCGGCAGACGTGTCAAAGGAACCATCCCTCGGGGGATGCG
CACGGGATGGTAGGAACGAAGAGGTCAGGCACGACGATAGGCTTTTGCCC
GATGGTCACCTTGGGCGGAGGCCCTCGTGGCCAATTTCGGCGGCGGCGGC
GAAGGCTACGGCGGCGATGGAAGAAACTTGGCGAGAGGCGGAAGGGGAGG
GAATTATCCACAGCGGCAGCAACAGCAGCAACAGCAGTAGTCGTGTCGGC
GCCAGTACCGCGGGCGGTAGCCAACCGGCACCCGCCCTTCGGTGCCGCCG
TCTGGTCCTCTCGGGCAAGGACGTCCCCGCCCTGTGGACTGGACGGTATA
CCCTGCAGGACGAGGGCGCCGACGAGGACAACGGCCGCGACGACGACGAC
GACGACGACAGCGACGCGGACGATCTAGAAGAAGCCTCGGAGGCGGGCGG
CGACTCCCGCACACCGTACGCAGAAGCGCCGCACTACTGCCTGGACACCT
CCCTGCGCCCTGATGCCAACGCCGCCGCTGCCGTTGCCGGAGGTCGGGCC
CGCCCTTCGCGGGAGGACAAGGCAGAGACAAAGACAGACGAACCAGGAGA
GGGGCCGCGAACGTCTCCGCGGCAAGCCTGGTTTGACGACGAAGGGCGGT
GTCCTGCAGGGGTAGGCGCCCTTTCTGCCCCCTGGCCGGAAAAAAGAGTC
CTCGCCGCTGCTGGGGCTGCTGGGGCTGTAGGGGCTGCTGGGGCTGCTGA
GGCTGGGTACGTTCGTTTCGCCACGGCGGCGATGGCAGCGCCCGAGCCGG
GCTTGCCGCAGACGACAGCTCCTGGTACTGCTACTGCCTCCGCCGCCGAA
GACGCCGCCGCAGACGCCGCTACAGCAGAAGTGGAGCTTGAGCTTGACGC
CGTTTTTTCCGGCGCACGAGCGGCGACGACGACGGCGACGACGGCTTCCG
CTTCTCCAGCGCACAACGAACCGGAAGACGGCCTTGGTCTGTCGGCAGCC
GCGGCGGGCGGGGTGCTGTGTCTGTACTGGGCCGACCTCGGAGACAACGG
GGGGCGCTGGGTGCTCGACGACGACCTCAGCCTTTCCAACGGAGTGCTCG
CCGTCACCAACGGCCCTGCACCTGCCGCCGCAGACCTGGCGTTTGTCAAC
CACGAGCATGAGCATAGCCACCGAGGTTCTCGGGCGTTGGCCAGCGGGAG
GACGAGGATAGGTGGCAAGACCGAAAGCGGTAGTTCAGGCCGGGTCGATG
CCCTTGCCGAGGTGGAAGGAAGCGGTGCACCAGATAGAATCGCGGTTAGC
GAGAAAGGAGGCGGTGGCCGAAGAGACGAGATTAGCCCGAACAGGCCGGG
AGAGGGCGCTGAACACGGGATTGCTGGCTTCGGAGGGGGTGGCGCTCGAG
ACGGCGTTACCACCGATGAAACGGAAGACGCCGCAGTGGTGGGTTCTCCG
GTATCGTTGCCTTGGTCGCCGGCGGTGTCGGGGGCGAAAGCGCACCCGAG
TTGGCTGCTCGATTCCCCCCGGATGCAAGGGTGGGTGGAGGCCGACGATA
TGTTTGTTTTGTGTGAGACGGATTGTAAGTGAATGGTGGGCCCTCCTCAT
CGGCAGCACCGGCCACCGCCGCCGCCGCCCTCGCCACCGCCACCGCCCTC
AGCTGCGCCGGCGGAACTCTCCTCGCCTTTGGCGTGGCCCTCGACCAAGG
AACCCGCGCTGCAGGAGATGGTGCGCGCCAAGAAGAGGAGGCAGACCGCA
ACGACTGTCGCGGACGAAATCGCGCAGACGCAACCGACGGCTGTGCGGAA
ATTTTCCGTGGCTAGGGAGAGAGATGGGAACGGGGTGGAGAGCTCTGAAG
CATTTGCTACGACCGGAGGGGGCGCCACGGCAACGAGCATGGCTGGAGGG
GCGACCGAAATCGGTTCAGGAAACATGGTAGGCGGCACCCCGCCGCGGCG
GATCGGGAGCGGTCCGTCCAGCTGGCTTGGGGTAGGAGGCTTGACCCCCA
AATCAAGCGAGTGCGAAGAAGACGGCGAGGTTGGTTTGGCCCATCGTGGT
GGTGGTACTCCTGCTGCTACTGCTGCTGCTGCTGATGATGATGATGACGA
TGACGATGACGATGATGATGATGATACACCCGGCGGCGAAGGGGCATCCT
TCACAAATTGCCGTAGACAGCGGGAGACATTAGCAGCAGCAGCAGCAGCA
GCAGCAGCGACGCACGCCGAAGAAGTCGGGCGGCAAGAACCACAAGAACC
AACAGAAACGGCAAACGGTGCTCCCGCCGTGGAGGCGGGTGATGGCGGAA
AGGGAGGTGGGTCGGCACCACAAGCGGCGGGGGAAGCGCAGTCGCCACCC
GCGGCGTCAAATGAAGACCGCCGGCGTGTGTCGAACGGCCTTACAGCCCG
TCCCGCGACGGTCAAGCATGCGATGCCGCTCACGTTAGCGAGCGGTGCGT
CTCTATCCTCCTCCCCCGCTTCCGCCAACACCGCTGCTACTGCTGGCGTT
ACCGTTGCTGGTACTGCTCCCAGCCCCGCCAGAGGCGAGACAACAGCAGA
GGGCGAGCAGAGACGGCGGCGGCGGCGCGGGCAGCAGCGGCTCCAGCGGT
TGCCGACCTTCGGTGCCACTCCTGCTGCTTTCGCCCAGACCCTCGGGTCG
GCCGAGAGCAGCCTGGCGATGCTTTCGGGTAGCGGGAACGACGAGCACGA
CGACCGAGCGACCGCTTTGCGCGCGGCCCTGTCCGCGAAGGCCGCGCGCT
CTGCCTGCGAGTCCCTAGCCTGGAGCAAAGCCGGGTCGGCGCTGGGGGGG
GCGCGCCGAGGCGACGACGGAAACTGCGACACCGACGCAGCCTGGGAAGG
TGTCCAAGGAGGAGAAGCTCTCGGTGCACGAGTGGCCTCTCTATCATCTA
CCGGGGGTGTCAAGGCGGACAGCTCGTCAGGGGCGGGGTACGTATCTGCT
GCCGAACGCGAGGCAGGGGTGATGGCGGGCGCGACCGCGGAGGCGGCAGA
CGTGTCAAAGGAACCATCCCTCGGGGGATGCGCACGGGATGGTAGGAACG
AAGAGGTCAGGCACGACGATAGGCTTTTGCCCGATGGTCACCTTGGGCGG
AGGCCCTCGTGGCCAATTTCGGCGGCGGCGGCGAAGGCTACGGCGGCGAT
GGAAGAAACTTGGCGAGAGGCGGAAGGGGAGGGAATTATCCACAGCGGCA
GCAACAGCAGCAACAGCAGTAGTCGTGTCGGCGCCAGTACCGCGGGCGGT
AGCCAACCGGCACCCGCCCTTCGGTGCCGCCGTCTGGTCCTCTCGGGCAA
GGACGTCCCCGCCCTGTGGACTGGACGGTATACCCTGCAGGACGAGGGCG
CCGACGAGGACAACGGCCGCGACGACGACGACGACGACGACAGCGACGCG
GACGATCTAGAAGAAGCCTCGGAGGCGGGCGGCGACTCCCGCACACCGTA
CGCAGAAGCGCCGCACTACTGCCTGGACACCTCCCTGCGCCCTGATGCCA
ACGCCGCCGCTGCCGTTGCCGGAGGTCGGGCCCGCCCTTCGCGGGAGGAC
AAGGCAGAGACAAAGACAGACGAACCAGGAGAGGGGCCGCGAACGTCTCC
GCGGCAAGCCTGGTTTGACGACGAAGGGCGGTGTCCTGCAGGGGTAGGCG
CCCTTTCTGCCCCCTGGCCGGAAAAAAGAGTCCTCGCCGCTGCTGGGGCT
GCTGGGGCTGTAGGGGCTGCTGGGGCTGCTGAGGCTGGGTACGTTCGTTT
CGCCACGGCGGCGATGGCAGCGCCCGAGCCGGGCTTGCCGCAGACGACAG
CTCCTGGTACTGCTACTGCCTCCGCCGCCGAAGACGCCGCCGCAGACGCC
GCTACAGCAGAAGTGGAGCTTGAGCTTGACGCCGTTTTTTCCGGCGCACG
AGCGGCGACGACGACGGCGACGACGGCTTCCGCTTCTCCAGCGCACAACG
AACCGGAAGACGGCCTTGGTCTGTCGGCAGCCGCGGCGGGCGGGGTGCTG
TGTCTGTACTGGGCCGACCTCGGAGACAACGGGGGGCGCTGGGTGCTCGA
CGACGACCTCAGCCTTTCCAACGGAGTGCTCGCCGTCACCAACGGCCCTG
CACCTGCCGCCGCAGACCTGGCGTTTGTCAACCACGAGCATGAGCATAGC
CACCGAGGTTCTCGGGCGTTGGCCAGCGGGAGGACGAGGATAGGTGGCAA
GACCGAAAGCGGTAGTTCAGGCCGGGTCGATGCCCTTGCCGAGGTGGAAG
GAAGCGGTGCACCAGATAGAATCGCGGTTAGCGAGAAAGGAGGCGGTGGC
CGAAGAGACGAGATTAGCCCGAACAGGCCGGGAGAGGGCGCTGAACACGG
GATTGCTGGCTTCGGAGGGGGTGGCGCTCGAGACGGCGTTACCACCGATG
AAACGGAAGACGCCGCAGTGGTGGGTTCTCCGGTATCGTTGCCTTGGTCG
CCGGCGGTGTCGGGGGCGAAAGCGCACCCGAGTTGGCTGCTCGATTCCCC
CCGGATGCAAGGGTGGGTGGAGGCCGACGATATGTTTGTTTTGTGTGAGA
CGGATTGTAAGTGA