mRNA_H-canaliculatus_F_contig12366.2013.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: D8LR76_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR76_ECTSI) HSP 1 Score: 160 bits (405), Expect = 7.540e-45 Identity = 77/83 (92.77%), Postives = 81/83 (97.59%), Query Frame = 1
Query: 1 RCLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
RCLVTVEMGK LPVGQAVLASGVSFDAPKHIFLMLFILTDM+RPDTFFRPYY+LLPTTLSNMPIFW EEEM+LL+GSYLVTQV
Sbjct: 150 RCLVTVEMGKALPVGQAVLASGVSFDAPKHIFLMLFILTDMRRPDTFFRPYYDLLPTTLSNMPIFWTEEEMRLLQGSYLVTQV 232
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: W7THN2_9STRA (Set domain containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THN2_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.440e-32 Identity = 55/83 (66.27%), Postives = 71/83 (85.54%), Query Frame = 1
Query: 1 RCLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
RCL+TVEMGK VG+AVLAS + DAPKHIFLMLF+LTD + P +FF+PYY++LP++LSNMPIFW +EE+ LKGS+L+TQ+
Sbjct: 69 RCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQI 151
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: A0A6V1NVS5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVS5_HETAK) HSP 1 Score: 124 bits (311), Expect = 8.160e-32 Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 1
Query: 4 CLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
CL+TVEMGK VGQAVLA+ + DAPKH+FLMLF+L D K PD+FF+PYY+ LP TLSNMPIFW+EEE++ L GSYL TQV
Sbjct: 49 CLITVEMGKQTEVGQAVLAANLDLDAPKHVFLMLFMLVDRKNPDSFFKPYYDTLPPTLSNMPIFWSEEELRWLDGSYLQTQV 130
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: A0A7S2FNW3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNW3_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.930e-31 Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 4 CLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
CL+TVEMGK +G+AVL S + DAPKH+FLMLF+L D K P + F+PYY+ LP TLSNMPIFW++EE+ LL+GSYL+ QV
Sbjct: 50 CLITVEMGKATDIGRAVLQSDLDLDAPKHVFLMLFMLIDRKNPTSHFKPYYDTLPPTLSNMPIFWSQEELALLEGSYLLVQV 131
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: A0A7S2WKZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKZ7_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.400e-30 Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 4 CLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
CL+TVEMGK VG AVLA+ + DAPKH+FLMLF+L D KR D+ F+PYY++LP TLSNMPIFW EE+ LL+GSYL+TQ+
Sbjct: 89 CLITVEMGKATDVGAAVLAANIELDAPKHVFLMLFMLVDRKREDSHFKPYYDILPETLSNMPIFWNSEELALLEGSYLLTQI 170
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: A0A4D9D3E6_9STRA (SET domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3E6_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.190e-30 Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1
Query: 1 RCLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
RCL+TVEMGK VG+AVLAS + DAPKHIFLMLF+LTD + P +FF+PYY++LP++LSNMPIFW +EE+ LKGS+L+ Q+
Sbjct: 69 RCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLVQI 151
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: F0YNA7_AURAN (SET domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNA7_AURAN) HSP 1 Score: 115 bits (288), Expect = 7.720e-29 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 1 RCLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
+CL+TVEMGK VG+AVL + + DAPKH+FLMLF+L D + TFF PYY++LP+TLSNMPIFW +E++ LKGSYL+TQ+
Sbjct: 79 KCLITVEMGKATDVGRAVLEAELELDAPKHVFLMLFVLLDRRDSSTFFAPYYDILPSTLSNMPIFWQPDELEWLKGSYLLTQI 161
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: A0A835ZC89_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC89_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.510e-28 Identity = 50/83 (60.24%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 1 RCLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
+CL+TVEMGK PVG+AV+A+ DAPKHI+LMLF+LTD R D+FFRPYY++LP +LSNMP+FW + ++ L+GS++V QV
Sbjct: 87 KCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQV 169
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: A0A2D4BYU5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYU5_PYTIN) HSP 1 Score: 114 bits (285), Expect = 1.040e-27 Identity = 52/85 (61.18%), Postives = 70/85 (82.35%), Query Frame = 1
Query: 1 RCLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPD-TFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQVR 252
+CL+TVEMGK P+GQ +LA + F APKHIFLM+F+L DM+ D +F+RPYY+ LP TLSNMPIFW++EE++ LKGSY+V Q++
Sbjct: 554 KCLITVEMGKMTPIGQQLLAHNLEFVAPKHIFLMMFLLHDMEHMDESFYRPYYQTLPKTLSNMPIFWSDEELQWLKGSYIVQQIQ 638
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Match: A0A8J2SJU3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJU3_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.770e-27 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 1
Query: 1 RCLVTVEMGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTTLSNMPIFWAEEEMKLLKGSYLVTQV 249
+CL+TVEMGK VG+AVL +G+ DAPKHIFLMLF+L D D+FFRPYY++LP +LSNMPIFW E+ L+GSYL+ Q+
Sbjct: 79 KCLITVEMGKATDVGRAVLEAGLELDAPKHIFLMLFLLLDRCNSDSFFRPYYDVLPGSLSNMPIFWKPNELTWLEGSYLLVQI 161 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12366.2013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12366.2013.1 >prot_H-canaliculatus_F_contig12366.2013.1 ID=prot_H-canaliculatus_F_contig12366.2013.1|Name=mRNA_H-canaliculatus_F_contig12366.2013.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=77bp MGKGLPVGQAVLASGVSFDAPKHIFLMLFILTDMKRPDTFFRPYYELLPTback to top mRNA from alignment at H-canaliculatus_F_contig12366:2895..3146+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12366.2013.1 ID=mRNA_H-canaliculatus_F_contig12366.2013.1|Name=mRNA_H-canaliculatus_F_contig12366.2013.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=252bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12366:2895..3146+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12366:2895..3146+ >mRNA_H-canaliculatus_F_contig12366.2013.1 ID=mRNA_H-canaliculatus_F_contig12366.2013.1|Name=mRNA_H-canaliculatus_F_contig12366.2013.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=462bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12366:2895..3146+ (Hapterophycus canaliculatus Oshoro5f female)back to top |