mRNA_H-canaliculatus_F_contig1232.1984.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1232.1984.1
Unique NamemRNA_H-canaliculatus_F_contig1232.1984.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: D7FZL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL8_ECTSI)

HSP 1 Score: 574 bits (1480), Expect = 1.450e-189
Identity = 352/719 (48.96%), Postives = 416/719 (57.86%), Query Frame = 1
Query:    1 RVAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSS-SRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYP-DGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGL-VEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQAS-SVRVVVSDEFLDKVQDGSIEIRSRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPTDYVDLMEGLASVAGLLPSKQHMQAEDRWEGLPTEGSMDCSGDRISGSAVPPSSGGTDHVTSLPSDLAEATASGLRTNALDSVVASNCLTEASDADDATVDAVQNARTMMRALGRLIRAEVAPGQQDEDDRAQEEKAMRLLKEWMWSGPFLPCHYHVRQFLPLDG 2145
            +VAIIGGGPSGLT+AK+CLE +L+PT+FERD+ LGGLWK+GSGGRVWSSLKTNLSKHTCCFSDF WP D PDFPSS +R RQYI+DYA  FDL +HVRFG  VTA  P    DG     +P W++TFTST            G Q        S T + +VV RTE FDKCIIASGIFSEP+ P    V+GI+ AVEQGWATHGA YR+P  + G + LVVGCAFSGAEIAS   G + R                    SG                                              S SD R      +   C +D    +   + +VPLDLALYS ++    K + AS  EK E +RKFLV+LAGRDPGDAHEALRL     + H   S SVRVVVSD+FLD+V+DG IEIR RL ALD  E+T RFSDG    VDHVI CTGLRP L FLP ++L  LE D+ DLLQPLILHLQ WNP VP LGFVGVYRGPYFG MELQARW+ RMW+G V  PTE  S  AL+E+RSVR+  PRPQFPTDYVD+MEGLA VAGLLPSK+                                      ++S PS                 V   NCL E +D+++           MMR+   L  A+   G+   +  ++E  A+ +L E MWSGP LPCHY ++    LDG
Sbjct:    3 KVAIIGGGPSGLTSAKACLEANLVPTVFERDLCLGGLWKAGSGGRVWSSLKTNLSKHTCCFSDFRWPVDTPDFPSSEARLRQYIEDYAAHFDLAKHVRFGVSVTAAVPCLAADG-----SPRWNITFTSTTHRRCAA----RGDQR---TTDPSVTAQEDVVQRTETFDKCIIASGIFSEPHFPP---VEGISEAVEQGWATHGAAYRDPGFFGGDSVLVVGCAFSGAEIASAHVGASAR------------------RRSGDD--------------------------------------------SSSDKRGSEKHPDNPRCTQDTPPHLATASPRVPLDLALYSRRARAGSKLAPAS--EKLESSRKFLVELAGRDPGDAHEALRLSQGSENSHGSESVSVRVVVSDDFLDRVRDGCIEIRQRLVALDTTERTVRFSDGKVEKVDHVILCTGLRPSLEFLPGDVLGQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQARWIARMWSGAVPMPTETESAAALQESRSVRTVIPRPQFPTDYVDMMEGLAGVAGLLPSKRK------------------------------------DLSSSPSSA---------------VSPVNCLGEIADSEEFVA--------MMRSQRPLSGAKGTAGR---EGGSEEGDAIGVLNERMWSGPLLPCHYRLQH---LDG 577          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: A0A6H5KU92_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU92_9PHAE)

HSP 1 Score: 540 bits (1390), Expect = 1.930e-170
Identity = 355/779 (45.57%), Postives = 429/779 (55.07%), Query Frame = 1
Query:  127 GGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTS-TRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPN--------------NFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQAS-SVRVVVSDEFLD-----------------------------------KVQDGSIEIRSRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPTDYVDLMEGLASVAGLLPSKQHMQAEDRWEGLPTEGSMDCSGDRISGSAVPPSSGGTDHVTSLPSDLAEATASGLRTNALDSVVASNCLTEASDADDATVDAVQNARTMMRALGRLIRAEVAPGQQDEDDRAQEEKAMRLLKEWMWSGPFLPCHYHVRQFLPLDGGSRDAIIMSQSSPGEAPNAARPRLCGSVEDTLDVVYQAIAEIQYVNEKLEKAHRA 2310
            GGRVWSSLKTNLSKHTCCFSDF WP D PDFPSS+R RQYI+DYA  FDL +HVRFG  VTAV P       ++ +P W++TFTS T       GD  + + D       S   + +VV RTE FDKCIIASG+FSE + P    V+GI+ AVEQGWATHGA YR+P  +AGK+ LVVGCAFSGAEIAS       RCLAATG PSIFLPR V +  + G              P +  S    GA          + + G  +L  + +   RS       +R GG    N              + +VPLDLALYS ++    K   A ALEK E +R FLV+LAGRDPGDAHEALRL     + H   S SVRVVVSD+FLD                                   KV+DG +EIR RL ALD  E+T RFSDG    VDH+IFCTGLRP L FLP ++LR LE D+ DLLQPLILHLQ WNP VP LGFVGVYRGPYFG MELQARW+TRMW+G V  PTEA S  AL+E+RSVR++TPRPQFPTDYVD+MEGLA VAGLLPS +                                      ++S PS                 V   +CL E +D+ +  V  +Q+ R +  A G   R          +  ++E  A+  L E MWSGP LPCHY ++    LD        M       A + +    C +     +V+ +AIAEI  VN KLE+A+RA
Sbjct:  380 GGRVWSSLKTNLSKHTCCFSDFRWPVDTPDFPSSARLRQYIEDYAAHFDLAKHVRFGVLVTAVVPR---PAADAGSPRWNITFTSATHGRCAARGD--QRTTD------PSVPTQEDVVQRTETFDKCIIASGVFSELHFPP---VEGISEAVEQGWATHGAAYRDPGLFAGKSVLVVGCAFSGAEIASG------RCLAATGRPSIFLPRFVDIYAARG--------------PPSSASVPQDGAGNVAAKPGNGTSTAGDGALQSAHSARRRSGDNLTSTKRGGGKHPDNPRCTQDTPPPLATASPRVPLDLALYSRRARAGSKL--APALEKLEKSRNFLVKLAGRDPGDAHEALRLSQRSENRHDSDSGSVRVVVSDDFLDRVRRVEANWGEVSHACRPPRRVLLRVHFEMTGPFSKVRDGCVEIRQRLVALDTTERTVRFSDGDVEKVDHMIFCTGLRPSLGFLPGDVLRQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQARWITRMWSGAVPMPTEAESAAALQESRSVRTATPRPQFPTDYVDMMEGLAGVAGLLPSNRK------------------------------------DLSSSPSSA---------------VSPVDCLGENADSAE-LVAMIQSQRPLSGAKGTTGR----------EGASEERDAIGALNERMWSGPLLPCHYRLQH---LDARVSPCDTMDVEGSARAVDFSSRAHCTTSRH--EVMREAIAEIGEVNAKLERAYRA 1055          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: A0A813EY66_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EY66_POLGL)

HSP 1 Score: 281 bits (718), Expect = 3.960e-80
Identity = 196/571 (34.33%), Postives = 264/571 (46.23%), Query Frame = 1
Query:    4 VAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEIR-SRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPT-DYVDLMEGLASVAGLLPSK 1710
            VAI+G GPSGL A K+ LE  L P++FE+   +GGLW+  S G+VW SL+TNLSK TC FSDF WPE  PDFP S   + Y++ YA + DL +++RF   V +V P      V   A  W+VT+                              EG    +TE FD  ++A+GIFSEP L A   V G+ A   Q    H A+YREP  +AG+  LVVG AFSG ++A+DL G       A+  P  ++PR ++     G+                                                                           P DL  YS   W +G+ ST    E      KF + +AG    D  E L+ P+    D P      V +SD FLD  +   +++R S +   D     A F+ G+    D VI  TG R  L F     L+ +EFD  DLLQP ILH    +P +PGL FVG+YRGPYF +MELQAR+   +++G +  PT       L E R +R+  PRPQFP  DYV + + LA + G+ P +
Sbjct:    9 VAILGAGPSGLAACKAALEEGLRPSVFEQAAGVGGLWRGDSFGKVWKSLRTNLSKFTCSFSDFPWPEQAPDFPGSGEVQAYLEKYARQHDLLRYMRFQARVISVEP------VEGGAGGWNVTWQ-----------------------------EGASETKTERFDFVVVATGIFSEPCLDA---VPGLGAFTGQ--VIHAASYREPSQFAGQRVLVVGAAFSGTDVAADLVGAAATVTVASRRPLWYIPRYIS-----GR---------------------------------------------------------------------------PADLVFYSRAKWEKGRHSTEE--EANLLRHKFFLSIAG----DLPEPLQTPNPDRGDLPF-----VAISDAFLDAARKKLVKVRPSEVVGFD--GAAAIFACGSREEFDAVIVATGYRLSLPFFSSSTLQTMEFDSTDLLQPAILHSCILHPGLPGLAFVGIYRGPYFATMELQARYALGLFSGRLQQPTPEVFSAGLAEERQIRAKRPRPQFPHGDYVGMTDSLAKLVGVHPGE 446          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: A0A7S4PXJ1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PXJ1_9DINO)

HSP 1 Score: 269 bits (687), Expect = 7.250e-76
Identity = 194/572 (33.92%), Postives = 259/572 (45.28%), Query Frame = 1
Query:    1 RVAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEIRSRLTALD-LKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPT-DYVDLMEGLASVAGLLPSK 1710
            RVAIIGGGPSGL A K+ LE  L PT+FE+   +GGLW+    G+VW +L+TNLSK+TC FSD  WP   PDFP+ S  + Y++ YA R  L +  RF   VTA+    PDG        W VT+                S+ GG     SC+         E F   ++ASGIF+ P+ P     +       +G  TH   YREP  +AG+  LVVG AFSGA+IA+DL+G       A   P  +LPR +                                                                               N + P DL  YS  +    +T  AS  ++    ++F   L G+ P    E L  PD    + P      V ++D FLD ++ G++  R+R+  ++  +  +  FSDGT    D VI  TG R  L FLP E    LE    D LQP ILH   W   + GL FVG+YRGPYF +MELQARW+  +++G +  P        LE  R +R   PRPQFP  DYV ++E LA   G+ P +
Sbjct:    5 RVAIIGGGPSGLAACKAALEEGLAPTLFEKAAGVGGLWRGDEHGKVWKALRTNLSKYTCAFSDGPWPPSAPDFPAGSEVQGYLEGYAARHGLLRCARFRSEVTALQR-LPDGA------GWHVTW----------------SEQGG-----SCS---------EAFGGVVVASGIFARPHCPELQGAEEF-----RGRVTHACEYREPTPFAGRRVLVVGAAFSGADIAADLAGAAASVTIACRRPLWYLPRYI-------------------------------------------------------------------------------NSR-PADLVFYSRAA--SARTRGASEEDRNLQRQRFFAGLVGQLP----EPLAAPDPERGELPF-----VTITDSFLDSLRAGTV--RARVAGVEHFRGSSVVFSDGTSEDFDDVILATGYRLELPFLPPEARDALELRPEDGLQPAILHEAVWPRGLAGLAFVGLYRGPYFAAMELQARWVCGVFSGRLPAPAPEELAAGLEVERQIREQRPRPQFPHGDYVGMVEALAQRVGVHPGE 441          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: A0A2X3KK38_9ACTN (Uncharacterized protein n=1 Tax=Frankia sp. Ea1.12 TaxID=573499 RepID=A0A2X3KK38_9ACTN)

HSP 1 Score: 252 bits (644), Expect = 7.790e-70
Identity = 181/580 (31.21%), Postives = 258/580 (44.48%), Query Frame = 1
Query:    4 VAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRL-PDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEI-RSRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPTDYVDLMEGLASVAGLLPSKQHMQAEDRW 1737
            VAI+G G +GL  AK+  E DL+PT+FE     GGLW+  +G  VW  L TN+S+ TC  SD+ WP   P+FP S+   +Y++ YA  FD ++ +RFG  VT V       RV+ +   W V F+                 +GGCA             R E+FD  ++A+G F  P  P   RV G       G + H   YR P  + G+  +VVG AFSGAEIA++L+       A T  P   +PR + +G  GG+                                                                         +VPLDL   +  +      + A    +R   R  ++   G +PG+  EALRL PDS    H       VVVSD    +V +G + +   R+  L+         DG     D VI+CTG RP L+FLP  + R +E+D  D+ QP++L    +   +PGL FVG+YRGPYFG +ELQARW+  + A  V  P        +  AR  R + PRPQFP + ++  + +  + G+LP  +  + E  W
Sbjct:    4 VAIVGAGLAGLATAKAAREYDLVPTVFESAPEAGGLWRPRTGS-VWPELTTNISRFTCSLSDYPWPAGTPEFPRSAAVAEYLKSYARDFDADRAIRFGCRVTGVE------RVSGR---WRVAFS-----------------EGGCA-------------RAEVFDALVVATGFFGRPVFP---RVSG----GFDGLSIHSGAYRGPAEFRGRRVVVVGMAFSGAEIAAELARDGAAVTAVTPRPFWLVPRRIPLG--GGR-------------------------------------------------------------------------RVPLDLYGNTRSARLGPPGAVAPPPAERYRRRNQMLSAIGMNPGEIDEALRLDPDSTDPPH-------VVVSDTVGTEVVEGRLRVVAGRVRRLE--RSAVVLDDGRRVDADAVIWCTGYRPDLTFLPRTVSRAVEYDPTDIFQPVLLADAVFPQEIPGLSFVGMYRGPYFGVVELQARWVCAVMASAVPSPAPLERARGVGTARETRLARPRPQFPHNDLEQADRIGRILGVLPEPESARDEKNW 452          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: A0A6A8QHD0_9PROT (SidA/IucD/PvdA family monooxygenase n=1 Tax=Telmatospirillum sp. TaxID=2079197 RepID=A0A6A8QHD0_9PROT)

HSP 1 Score: 225 bits (574), Expect = 2.560e-60
Identity = 181/574 (31.53%), Postives = 242/574 (42.16%), Query Frame = 1
Query:    1 RVAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGRVWSSL-KTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREP----HSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEIRSRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPT-DYVDLMEGLASVAGLLP 1704
             VAIIG GPSGL AAK+ LE  L P +FE     GG+W S   G  WSSL +TNLS H+C FSDF WP     FP  S   +Y+  YA  F L  H+RFG  V AV                       RD+            D G  +    +G       ++ F   I+ASG F+ P+ P    +        +G   H A    P    H + G   LVVG AFSG EIAS L       +    +P  F+PR                                       +A+                                     P   + PLDL +YS   W       A    KR+  R FL ++AG    D               P A+   + ++DEFL ++  G + ++ R + +       RF+DG+   VD V+ CTG    L F   +LL +L F   D  QPL+LH   ++P +PGL FVG YRGPYF  MELQARW+  + AG++ PP++A     +  +R +R   PRPQFP  D+VDL +GLA   G+ P
Sbjct:    3 NVAIIGAGPSGLAAAKAVLEQGLTPVLFEASGETGGMWASPGRG-AWSSLGRTNLSYHSCAFSDFPWPAGTDVFPQRSEVGRYLTAYAEAFGLTPHIRFGTRVLAVR----------------------RDD------------DAGWRVAARTSGG---AMESQSFPHVIVASGFFARPHTPPFPGLSSY-----RGQIFHSADCDSPVVMGHRFHGLRVLVVGAAFSGTEIASQLIQYADEVIVTFRNPMWFVPRWA-------------------------------------QAL-------------------------------------PRGRRHPLDLVMYS--RW-------ADLPVKRDPVR-FLSRVAG----DXXXXXXXXXXXXXXAPPAT---IAITDEFLRQIGAGLLSVK-RSSGITFAATGVRFADGSRRDVDAVVMCTGYTATLPFFDSDLLDILAFHAGDQFQPLLLHRDMFHPALPGLFFVGQYRGPYFPVMELQARWIAGIAAGLMPPPSDAEMAEGIAVSRRLRHKQPRPQFPHGDFVDLADGLARTIGVYP 441          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: R1BSZ2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BSZ2_EMIHU)

HSP 1 Score: 223 bits (568), Expect = 1.230e-59
Identity = 179/571 (31.35%), Postives = 238/571 (41.68%), Query Frame = 1
Query:    1 RVAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRC-LAATGH-PSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEIRS-RLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPTDYVDLMEGLASVAGLLP 1704
            RVAI+GGGPSGL AAK  L   L PT+ E+  S GGLW++  G +VW SL+TNLSKHTC FSDF WP    DFP +     Y++ YA  F L   +  G  VT V                       +  +   G C      GG               + E F+  IIA+G+FS P++PA   + G      Q    H + YR+   +AG+  LV+G AFSGA+ A+ ++ V +   L A+G  P  +LPRLV                                                                       DG          P+DLALYS                             GR  G       LP   +D  P     RV ++DE    V  G + +++ R+ A +    T  F DG     D ++  TG R  ++FL   L   +E+D +D LQPLI H   W P  P L FVG+YRGPYFG +ELQARW   ++AG +  P+       L   R++R   PRPQFP DY  + + LA   G LP
Sbjct:   10 RVAIVGGGPSGLVAAKEALAAGLRPTVLEKSSSAGGLWRAADG-KVWQSLRTNLSKHTCAFSDFPWPSTADDFPHAEDVADYLERYARTFGLHACIELGARVTLV-----------------------QRASFGRGYCVRWVSQGG-------------TEQAETFEFAIIAAGVFSAPHVPA--ELHGF-----QNQVVHASQYRDSSDFAGRRCLVLGAAFSGADAAASIARVAESVTLVASGTAPLYYLPRLV-----------------------------------------------------------------------DGR---------PIDLALYS----------------------------RGRLEG-------LPSPRTDRKP-----RVAITDELSRAVSAGLLSVQTARVRACERGWVT--FEDGRRAEFDVILAATGYRTAVNFLAPALSEAVEYDADDWLQPLIAHECVW-PAAPNLAFVGMYRGPYFGVLELQARWACGVFAGRLPMPSAGELADGLARERAIRQMDPRPQFPHDYPTMADDLARHVGALP 413          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: A0A212JHN2_9PROT (Uncharacterized protein n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212JHN2_9PROT)

HSP 1 Score: 221 bits (563), Expect = 5.940e-59
Identity = 184/575 (32.00%), Postives = 247/575 (42.96%), Query Frame = 1
Query:    4 VAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGR-VWSSL-KTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGAT-YREP---HSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEI-RSRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPT-DYVDLMEGLASVAGLLP 1704
            VA+IG GPSGL A K+ LE  + P +++    +GG+W  G+ GR  WSS  +TNLSK +C FSDF WP+    FP       Y++ YA  F L +  R    V  V P  P          W VT  +                              N    T  FD  ++A+G+FS P +P     DG+ +   QG   H A  Y E     ++  K  L+VG AFSG EIA  +SG  K+ +    +P  F+PR V                              SGA                                                  P DL  Y+ +          + +  R   R +L ++ G DPG     L        D  + + + VV SD+FL  V DG +   RSR  A D  +K   +SDGT   +D V+ CTG    L FL  E+L  +EFD  D LQP++LH Q ++P +PGL FVG YRGPYF  MELQ+RW+ R+ AG   PP+ A     +E  R +R+  PRPQFP  DYV L +G A   G+ P
Sbjct:    4 VAVIGTGPSGLAATKALLECGIEPVVYDSAAEIGGMW--GAPGRGAWSSYARTNLSKFSCVFSDFTWPQRTDVFPMRRSVIDYLKAYAAEFRLARCFRMNTRVETVAPAGPH--------RWRVTTLA------------------------------NGRRETREFDWVVVATGVFSRPFVP---DFDGLPSF--QGKIYHAADCYSEEVNRANFTDKRVLIVGAAFSGTEIAGQISGFAKKTVVGLRNPMWFVPRWVKPW---------------------------SGAP-----------------------------------------------LFPADLVFYTRQP--------DNPMNLRP--RTYLKEMGG-DPGLVCRDLAF------DSLETAPMTVVTSDDFLALVGDGKVVAKRSRAFAFD--DKGVLYSDGTRDDLDAVVMCTGYSSALPFLSPEILAAVEFDPRDQLQPVLLHHQVFHPDLPGLAFVGYYRGPYFPVMELQSRWVARIAAGETAPPSLAEMRAGVEIERVIRNRRPRPQFPHGDYVRLADGFAREVGVFP 440          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: A0A812MNS4_9DINO (FMO5 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MNS4_9DINO)

HSP 1 Score: 217 bits (552), Expect = 2.090e-57
Identity = 181/574 (31.53%), Postives = 251/574 (43.73%), Query Frame = 1
Query:    4 VAIIGGGPSGLTAAKSCLEVDLM------PTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEIRSRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPR-VPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPTDYVDLMEGLASVAGLLP 1704
            VAIIG GPSGL AAK+ LE  L       P++FE+   +GGLW++ S G+VW SL+TNLSK+TC FSDF WPE+   FP +    +Y++ +A    L+ H+     VT+V+    DG  +     W               + GE  Q                    + F   ++ASGIF + +L    ++ G+      G   H A YR+P  +AGK  LVVG AFSGA+IA DLS      +A  G P  ++PR V                                                                       +G         VP DLA YS K   + K +   +  +R      L Q+         EAL  P   +   P      V +SD F D V+ G++ +    T  ++   T  F+DG     + ++  TG    L FL  EL + +   E D LQPLIL   TW P   PGL FVG+YRGPYF  +ELQARW   +++G +  PTE     +L+ A ++R+   RPQFP  YVD+ E LA + G+ P
Sbjct:   12 VAIIGAGPSGLAAAKAALEEGLRRGYGEGPSVFEKSGGVGGLWRA-SEGKVWDSLRTNLSKYTCAFSDFPWPEEAETFPKAREVCRYLERFAE--SLQPHLHLHCEVTSVSRGQ-DGETSGWQLAWR--------------EAGEPKQ--------------------QHFRHLVVASGIFEKAHL----QLPGLE--TFPGLLRHAADYRKPEEFAGKKVLVVGSAFSGADIAVDLSSCASVTVAG-GKPMWYIPRYV-----------------------------------------------------------------------NG---------VPADLAFYSRKP--KPKQTPEESNRQRHQFLSGLAQMP--------EALTAPSDWT--RPPF----VCISDHFADAVRTGAVSVAG--TVSNVTGSTVHFADGRSEEFEALLVATGYDLDLPFLVPELKKAVHL-ERDQLQPLILSHCTWPPEEFPGLAFVGIYRGPYFAVLELQARWACGVFSGRLRAPTEEERRESLDRAWALRAGEDRPQFPQSYVDMAEELADLVGVHP 441          
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Match: B3ERU0_AMOA5 (Uncharacterized protein n=2 Tax=Candidatus Amoebophilus asiaticus TaxID=281120 RepID=B3ERU0_AMOA5)

HSP 1 Score: 217 bits (552), Expect = 8.020e-57
Identity = 161/579 (27.81%), Postives = 246/579 (42.49%), Query Frame = 1
Query:    1 RVAIIGGGPSGLTAAKSCLEVDLMPTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDFPSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSVTFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIASGIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAFSGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIISIIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEICQRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQLAGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEIR-SRLTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDENDLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVLPPTEAASIGALEEARSVRSSTPRPQFPTD-YVDLMEGLASVAGLLPSKQHMQAED 1731
            +V IIGGGPSGL AAKS LE  L P + E+D  +GG WK   G  +W+S+ TN S++T  FSDF W     DFP+      Y+  YA +F + +H+   H  + V        V      W VT+           + G+  Q                    + FD  I+A+G+FS+P +P    ++       +G   H   Y+ P ++  K  ++VG A+SG++IA+D+S      L     P   L R +                                                                             PN  ++P+D   Y+ +        T    EK   A KF  +L        H    +    + D    SS  V +SD +L+ +Q G +E+  +++  LD KE    F++G     D +IFCTG +  LSFL   + + L F   D LQP++LH    +P++P + FVG+YRG Y+G MELQARW   ++  ++  P+    +  +     +R+  PRPQFP D Y +L+E L    G+LP+   ++ ED
Sbjct:   43 QVLIIGGGPSGLVAAKSALECGLEPIVLEKDNVIGGAWKPHKG-LMWNSMTTNSSRYTTMFSDFPWQPGTADFPNQRDVHNYLVAYADKFGITKHI---HLESEVL------HVKRSQKKWQVTWK----------EVGKKKQ--------------------QKFDFVIVATGMFSKPYMPHLKGMEEF-----KGKIIHSKDYKSPEAFEHKRVVIVGGAYSGSQIATDISKNVSYVLNVISRPMYILQRYI--------------------------------------------------------------------------KAHPNGSEMPVDFTFYNREEKINELNLTVQ--EKNRRAHKFYSELC-------HNQANICKLLAIDPNTGSSPYVTISDTYLEDIQAGRVEVTLNKIARLD-KEGIV-FNNGERQPADVIIFCTGYQLDLSFLDPVIQKELTFSPEDRLQPVLLHKNVLHPKLPNMAFVGIYRGTYWGVMELQARWANMIFGEMLPLPSTKTMLEGISHELVIRTQKPRPQFPHDTYAELLEDLGKEIGVLPNMNALKLED 491          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1232.1984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL8_ECTSI1.450e-18948.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU92_9PHAE1.930e-17045.57Reverse transcriptase domain-containing protein n=... [more]
A0A813EY66_POLGL3.960e-8034.33Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S4PXJ1_9DINO7.250e-7633.92Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A2X3KK38_9ACTN7.790e-7031.21Uncharacterized protein n=1 Tax=Frankia sp. Ea1.12... [more]
A0A6A8QHD0_9PROT2.560e-6031.53SidA/IucD/PvdA family monooxygenase n=1 Tax=Telmat... [more]
R1BSZ2_EMIHU1.230e-5931.35Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A212JHN2_9PROT5.940e-5932.00Uncharacterized protein n=1 Tax=uncultured Alphapr... [more]
A0A812MNS4_9DINO2.090e-5731.53FMO5 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
B3ERU0_AMOA58.020e-5727.81Uncharacterized protein n=2 Tax=Candidatus Amoebop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1232contigH-canaliculatus_F_contig1232:5279..18839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score558.1
Seed ortholog evalue6.1e-156
Seed eggNOG ortholog2880.D7FZL8
KEGG koko:K14003
KEGG Pathwayko04141,map04141
EggNOG free text desc.N,N-dimethylaniline monooxygenase activity
EggNOG OGsCOG2072@1,KOG1399@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons9
Model size3332
Cds size2250
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928948.4917865-UTR-H-canaliculatus_F_contig1232:5278..62911622928948.4917865-UTR-H-canaliculatus_F_contig1232:5278..6291Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1232 5279..6291 -
1696845625.3257554-UTR-H-canaliculatus_F_contig1232:5278..62911696845625.3257554-UTR-H-canaliculatus_F_contig1232:5278..6291Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1232 5279..6291 -
1622928948.6442046-UTR-H-canaliculatus_F_contig1232:11081..110901622928948.6442046-UTR-H-canaliculatus_F_contig1232:11081..11090Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1232 11082..11090 -
1696845625.418298-UTR-H-canaliculatus_F_contig1232:11081..110901696845625.418298-UTR-H-canaliculatus_F_contig1232:11081..11090Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1232 11082..11090 -
1622928948.660363-UTR-H-canaliculatus_F_contig1232:18779..188391622928948.660363-UTR-H-canaliculatus_F_contig1232:18779..18839Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1232 18780..18839 -
1696845625.4317389-UTR-H-canaliculatus_F_contig1232:18779..188391696845625.4317389-UTR-H-canaliculatus_F_contig1232:18779..18839Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1232 18780..18839 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928948.511205-CDS-H-canaliculatus_F_contig1232:6291..69571622928948.511205-CDS-H-canaliculatus_F_contig1232:6291..6957Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 6292..6957 -
1696845625.3397145-CDS-H-canaliculatus_F_contig1232:6291..69571696845625.3397145-CDS-H-canaliculatus_F_contig1232:6291..6957Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 6292..6957 -
1622928948.529208-CDS-H-canaliculatus_F_contig1232:7228..73461622928948.529208-CDS-H-canaliculatus_F_contig1232:7228..7346Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 7229..7346 -
1696845625.352436-CDS-H-canaliculatus_F_contig1232:7228..73461696845625.352436-CDS-H-canaliculatus_F_contig1232:7228..7346Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 7229..7346 -
1622928948.5461638-CDS-H-canaliculatus_F_contig1232:7583..77891622928948.5461638-CDS-H-canaliculatus_F_contig1232:7583..7789Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 7584..7789 -
1696845625.362495-CDS-H-canaliculatus_F_contig1232:7583..77891696845625.362495-CDS-H-canaliculatus_F_contig1232:7583..7789Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 7584..7789 -
1622928948.5670345-CDS-H-canaliculatus_F_contig1232:8352..84451622928948.5670345-CDS-H-canaliculatus_F_contig1232:8352..8445Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 8353..8445 -
1696845625.3718748-CDS-H-canaliculatus_F_contig1232:8352..84451696845625.3718748-CDS-H-canaliculatus_F_contig1232:8352..8445Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 8353..8445 -
1622928948.5808232-CDS-H-canaliculatus_F_contig1232:8960..95051622928948.5808232-CDS-H-canaliculatus_F_contig1232:8960..9505Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 8961..9505 -
1696845625.3805287-CDS-H-canaliculatus_F_contig1232:8960..95051696845625.3805287-CDS-H-canaliculatus_F_contig1232:8960..9505Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 8961..9505 -
1622928948.5936637-CDS-H-canaliculatus_F_contig1232:9872..103341622928948.5936637-CDS-H-canaliculatus_F_contig1232:9872..10334Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 9873..10334 -
1696845625.3893828-CDS-H-canaliculatus_F_contig1232:9872..103341696845625.3893828-CDS-H-canaliculatus_F_contig1232:9872..10334Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 9873..10334 -
1622928948.6075003-CDS-H-canaliculatus_F_contig1232:10656..107601622928948.6075003-CDS-H-canaliculatus_F_contig1232:10656..10760Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 10657..10760 -
1696845625.400438-CDS-H-canaliculatus_F_contig1232:10656..107601696845625.400438-CDS-H-canaliculatus_F_contig1232:10656..10760Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 10657..10760 -
1622928948.6293569-CDS-H-canaliculatus_F_contig1232:11025..110811622928948.6293569-CDS-H-canaliculatus_F_contig1232:11025..11081Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 11026..11081 -
1696845625.40901-CDS-H-canaliculatus_F_contig1232:11025..110811696845625.40901-CDS-H-canaliculatus_F_contig1232:11025..11081Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1232 11026..11081 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1232.1984.1prot_H-canaliculatus_F_contig1232.1984.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1232 6292..11081 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1232.1984.1

>prot_H-canaliculatus_F_contig1232.1984.1 ID=prot_H-canaliculatus_F_contig1232.1984.1|Name=mRNA_H-canaliculatus_F_contig1232.1984.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=750bp
MPTIFERDMSLGGLWKSGSGGRVWSSLKTNLSKHTCCFSDFGWPEDVPDF
PSSSRFRQYIQDYATRFDLEQHVRFGHFVTAVTPTYPDGRVNSKAPMWSV
TFTSTRDENLPTGDCGEGSQDGGCAIVKSCTGEGNVVHRTEIFDKCIIAS
GIFSEPNLPAASRVDGIAAAVEQGWATHGATYREPHSYAGKTALVVGCAF
SGAEIASDLSGVTKRCLAATGHPSIFLPRLVAVGTSGGKAPAPASPTIIS
IIPSAETSSTVSGAEPSTEAIAETSGSFGSHSLSKSDAREHRSDQEGEIC
QRDGGLVEPNNFKVPLDLALYSLKSWTQGKTSTASALEKREGARKFLVQL
AGRDPGDAHEALRLPDSGSDDHPQASSVRVVVSDEFLDKVQDGSIEIRSR
LTALDLKEKTARFSDGTCTSVDHVIFCTGLRPRLSFLPEELLRLLEFDEN
DLLQPLILHLQTWNPRVPGLGFVGVYRGPYFGSMELQARWLTRMWAGVVL
PPTEAASIGALEEARSVRSSTPRPQFPTDYVDLMEGLASVAGLLPSKQHM
QAEDRWEGLPTEGSMDCSGDRISGSAVPPSSGGTDHVTSLPSDLAEATAS
GLRTNALDSVVASNCLTEASDADDATVDAVQNARTMMRALGRLIRAEVAP
GQQDEDDRAQEEKAMRLLKEWMWSGPFLPCHYHVRQFLPLDGGSRDAIIM
SQSSPGEAPNAARPRLCGSVEDTLDVVYQAIAEIQYVNEKLEKAHRAFS*
back to top

mRNA from alignment at H-canaliculatus_F_contig1232:5279..18839-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1232.1984.1 ID=mRNA_H-canaliculatus_F_contig1232.1984.1|Name=mRNA_H-canaliculatus_F_contig1232.1984.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=13561bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1232:5279..18839- (Hapterophycus canaliculatus Oshoro5f female)
AGGGTTGCGATCATCGGCGGCGGACCCAGTGGACTAACTGCTGCGAAGTC TTGCCTAGAGGTGAGATGAGATGTGGGTCAGGAAACCGTAGACTTCGGGG AACGCAGGGATACAGTGCATACAGCAGCAGTCTACCGGTAGTTGGCGAGA GCGGCATGTAGGCTAGAACCGATCGGATTTGATTCGTTGCTGCACATGTG CAAACGGAACATAATAATTCCTGTGCAGTGTTTCTTTCGGCTGACAGCCC AACTATAACTGCTGTAGTGCTCTGCCATAACTTATGCATTTAGGCTTGAC TACTGCTGTTGTCACGATAGTACGAGTAGGTCGCCGATACTAGGAGTGGG TGGCCCGCTACAGCAGTACGGTGGGACTCCCGACATCGTGGCACCGCCGT GAATAGTGATCTGCCCTGAAAAGATGGTGGCATGGAAATCGCTTGTGACC GCTTCGAGCCGATAAAGTGGCACTTTATCCAACGGGGCCCGCTAAAAGTG GTACTTCGAGCCTTCTCACCCCCCCTACACTAGTATATAAGTGGCATTAT CACTTGCGGAGTGGAGGGGGAAAGAGAAGGAGGCGCCGTATGCTTACTAC GTACGCGACGCTGGCGTTTTTCTCCGCAAAGGAAAGGAAAGGAAAGGAAA GGATAGTAAAGATGGGGTTCCTCGCCGCCCGCGTGGCTGCGCCGGCCGGC AGTCGGACATCAGGTCGTTTGCTTCATCTGTTGGGGTATTACGGAGCTTA TGTAGATGGTGGATGCCATCTCCCCCCTAATTCCTAATTCAAATGAACGT GAACTAAAACAACCATTATAGATGCCTACATGCAGATCCTATAACACATC GTAACGGGTAGGTCCTTGAGTACGAAACATAGATCGACATTAGAAGGGGT TCATGCTGAGGGGGCAATTTTGCGATTATGTCCATTTGTCTGGATGGTTG AATTTCCCTCGCGCACGTTTCATGTGCGGTTGAAACGCAACACTTGAGAA CTCGTACTTTCAACTTCATTCGGGTCTACATGCTACATATCGTGCTCAGA ACGATAAAAACTGTGCTGCTGAGGATCATCGAGAAGTATTACTGATGTCT CCGTGCCTTCATTCCGTCTCCTGCCTAGTACTGTATGTAGGCTGTGGCAG CTCAAAGCCCTAAAAGCCTTGTTTCACTCCGGTGAGCAAGATGGATTTTT CGGCGTGCTAGGCACGCATCAGAGTTTTTTTTTGTGGGAAGTGCAGCAAC ATACACGACGGCAGCGAAGCACTATGTTTGAAGTGCTGAACTACAAAGGA CCAACCAGCAAAACACTTTGTTGAGTCCACAGTAGTCATAACATACGTCG TCGAACGCACAACACCCGTGTGAGAAAGAATCTATGAGGAACTATCTACT GGCTTCTCCATTCTGCACTGTCTTTTCTGCTCGCTTGAGAGCCTTTTCCT CTCCACCATGGTAGCAAAACGCCATGTGACGGGCAGCCCGATGAACTGCC GGGTCACCACTGGTGAGGGACTCCCCAGTGGCACTGGCCTCAGATTCAGT TGACAGCTTTTACAACGTTTATTAACGGGAGTGCCCCTTTCAGGCGCAGC CTCATCAGCACGCCAGGACATCATCCCCGTATCCCCGGCATCCAGTCACT TCAAGAATGCCGCAACATTCTTAGAAAACCCGACAGTTACAACTCAACAG CAGGCGTATTTCGTCACAGCACCCCCGAAGCGCGTTGAACGAAGAAATCC GGACAACTAGCTTGATTCAAAGAAAACGCCGATGTTGAGAAAATCACAAT GGAATGCCAAACTCGCACTGAATGCGAGCCGCAACAACACGACTCACACG CAACTTCCGCAACTCTTATGCGAGAGATTCCGGGGCAGCCTCAAAAATGT CCCTAGAAGGCTCCCAGGTCCGCTCATCAACTTCGAACCCAACCCAGTCG ACCAACACGATCAAAGAACGATCTTCCGCTTCAGCCGCGCGTACCACACC AGCTATAGGAATTGCCCTTGACTAAACGCACATTGAAACACGTTCTTGAC GTCTGCGGTGACGTTGAGCTGCGAGTCGGCGTAAAAACGCAAACGAGCAA CGTGCGCTGTGCGAACTAGACCAGAAACAATGTTCTGAATCTCAAAGACA TGCGGATGGTGAGCACCTACCACCCGCCACGGTCCAGTCCACGTGACCAT AAGTTTGGGCGTAACACCCGGACGACGCACGCGAGCATACAAGAGATGAT CGCATACTTCGAAATTCGGCAATTCCAGCCCCTCTGAGGACTTCTTGCGT CGACGCACCCGTTCTACGGCCACGCGTTCCTGCGCTTGCACATGGAACTG CTCTTGCAACTGCAACGCTCCCTGCAAGGTACGCTTGATCTTGATATGAT CATCATCCAAGACATCGTACTTCCACTCCCCGGCGGACGAAGATGCCAAG ACCGAGAAAGACGTCCGAGGAGCGCGACCAAACATCACGTGGTGCGGCAT GCTACCGTCACGAGAACGAAACGCGGCATTGAGCGACCACTGCACAGCAG GCAAAACGTCCACGCACTAGGAAACCTGGCGACGTTGTTCCGACAAAATC TATCGTAGAGAACGAACTTCTTCCTTGACCATGCGCTCGCACGTTCCATT CGACCACGGAGAAAAAGCGACAGCGAGTTGATTATCAACACGCAAGGCTT CACGCAGGCAAGTCAGAATTGCGTTTTTGAAGAGCTTGACGGTATCACTA ACCCATACACGCGGCACACCCAAAGCCTTGCGCCAGGTCAACAAAGACGC AGCAGTCACTTCAGCTGTACACACCTCGACAGGCTCCAACGACACGTAGT TGGACAGATCGTCCATGATGACCACGATGTACCGAAAACCACCATCCTCG AATAGGCCTTGAAAAGCTTGTGGACCACTCTCGCTCACATACAAGAGGTC GAAATGCACTACTTCGTTGGGAGCGGTCCCATGGACCGTCTCACCCAGCG GACGGGGAACAACATCTCCCGAACGCGAGTCGGCACAGTCAAGACACTGC CGAACAAACTCTCGTCCCTGAGCTTCCATATCAGCCAAAACACAGTACTC TCGCAAACGCACGAGCGTCGCGGCAACGCCTCGATGCCCCGCGTCGCGCA TATGCGCACAAATCATTAAGCGCACCTGCAGCTGCTTGCCAGAGTCCGGA ATCCACAAAACATGCCTACCACGCACATGCACGCGTAACAGACCCTCCTC GTCCAAGGCAGTACGGCCTACCTTCGGCTCAAAATATCGCACAGTCGCAT CCGCGGTTGCAAGTTCGATCTTCTTCTGCGCTTCACGCACGACTCGTTTC GAAGGCATGGAATCATCCTGATCACACAGACCAAAAACAGCAACCGAACC CACAGGCAAAGCCGGAACACTCGCCCAACTCGAGAGCAGGTCACCCCACG TGTTGCGATCGCCCGGAATATGGCGAATGGTGTATCGGTACTGACCACGA ACACCCTTCCATCCTTCCAGACGTTGCGCCATTGCTTTCGACTCAGACGT GACGCACGAACTAGGATCGAAGATGTACGTGACGGCCTGCGCTACAAGAT CTTGCGCGTCCGCCCAAGCTGTTAACCTACCCTCCGTCCACGCGGTAGGA GGAATAACGCGGTTCTTCGCCACACGTATCGTCCGTCTCGGTGCCCCCGC CATCAGTTCTTACAGGAAGACACGCAGGAGATCAACGACTTCAGCCATTC GCGGCAGGTCTTCCTTAAAAATGTGGACTCCATTCCATAAGAGATGCTCC AAGCGTGTAAAAGTGATTACGATGGCAAACTCTTCCTTATCTATCGTGGC CCAACGCATCTGCGAACCCCTTAAGGTACCACTCATGAAAGTCAACGGTT CGTGGGTCATGTCCTCAAGAGGCACGAGCTGGTTCATTTCACCATCAGGT ACCTGCGTGACATAACGACCCCAATGGCACTCGGAAGCATCGGGTAACAT CAACACTTGGGCCAAAATCGCGCGCAAGCGTTCCGCCTTAGAGATGCTGA GGCCTTGCGCCACAGCATCCGTCACGCTCTCCTCCAGCGCGACCTTCTGA GCGGATTCTTCCTCCGCCGGGTCCATAAACATCTCAGGGCCGCGGTCTAC CAAGCGTCCCACCGCCAATTTCTGCTCCTCCGTTGCCTGCCCTCCAGCCT CCTGAAGCGCGGCTACCGACAAGGCCACTCGACGACTGCCCCCAAAAGCG GTGGTCTTGACGCCTTGCCCAGGCGAGGACACCCGCTGCTGCATGGAGTC CCAGATCCGTGCATATGGATCAACTCCTAGATCCTTCAGAGTCGGCAACC CGAGAAGAAGAACGCCATCCGACCCGGGCATGATCGCAAACGACATCAGA GGCAACGGTGCCGGCCCCCAAGGAGTCACTAGCGCCAGCTGCAGAGGAAA AGTACGCTCCGTCACAGAAACGTGCTGCCCCGATGCCGTGATAGCTTGTC GCGCCTTAAGCGAAACGGAACGCGCATCTGCACACCCGGGAACGTATGCT CCATCATTTCCACGATCAGCAACGATAGACTCATGAAATGAGCGCACGAA TCCAAAATGGCCTTAAGCGCAATAGCTCTCCGCGAACGTTGACCAGGCAG GCAAAGCTCAGCGGGTACATAATTGACCTCGAACTCTATGGGCACTTAAT CCGCATTTCGACGCGCCGTGATCCCCACTGGACGCCACGGCCGCGCAAGC TGTGCGGGCGGAGACGCCACAGAGGACTCAAACGGCACCCAGCAGACAAC GAACTTTGTGAACTCACCACCGGAGCAGCGCTAGGCGTCGCTGCCGGCGC TGCTACAGACGACACCGCTAGCCCCGCCACCGCCACCGGCGGCGCAAGAA GTGGTCGGATTCGTGTCTACCTGCACAGTCCGTTGAGGAGCAGCTCCACC CGACCCTGGTCATGACCAACCAGATTGACTCTTCGAAGTCGAAGTCTGCT GCTGCTGCTGCTGCTGCTGAGAAGAGGAGTATCCTCCACCAGCAGACGAT CCCGCGGGCCCACCGCTGCGATTCCACGTGCTCTGTTTATTGCGGGAAGG GCCTTGCTGCCGATCCCCCTTGGATGACGCCGGACAGTCGCTCGCAGTGT GACCTCGCTGGCCGTACTGGAAACACTCTCGCCTCTCACGACCTGTTGAT TGCGACCCTTGATGTCGCGAATTAGGCCTGGAGGCCTGCCACGAGTGCGG CGTTGAGGTGGAAGAATGGCTGAAAGCCTCGATCTTTCGCCATTCTTTGG CCTCCGCCACGACAGTGTCCATCACCAGATCAGGACCAGCCTTCCAGTTT CCCGTATATGCTGTAACCTGACTTGCACATCCTGCCGAAAATGTTCCGGC GTCAACCCCTCAACCAAAGCCTTTGTGATGACCTCGGCTGGGCCGGGAAA CTACTTGCCATCGGAGGAACGATACACCGCTTCGAAATGCGGGTTGTCTG CGAAAAACTTGTCCAAATTCGACATGATGGACTCGACTCGCTCCAACAAC GTCTTCCGTGGTCCACGGCGACCGCCTTCGCCACGGCAGCCGATGTGGCC GTCAACTCCACGTCTTCTGCGAGCCCAGCATGCTTTTTCACCGCAACGAC CAACTGCTTCGGCGTAATCGTGCGAGATTCATGGTACACGCGAGCAAAAA CTTTTTTGCATGTGACTCGGAATCAACTCTGCCATGGGCACCACCTTGCG CTGTCAAGCGCCTCCTGCATTACCGTGTGCAACACGCTTCCTATACTCCG CGCACTTGGTGTGAAACGCCCTCGACGTACCCTCGGAGTATTTGCCCCCA TACACGGGGGGTCGCGTGTCCTCCCGCAAGACCACGGGAGTCACGGCTTG CTCTCGTGCCGGTCGCCATCTCAGCGTTCGCAATCAGCAAACAACCTACT TTCCGCAAATTGCACACTCCACACCTGCCTTCGTCGCCGCACTCTACAGC CGTAGAAGCATTCAACTCCCGTTGCAAGTAGCTCCAGCAAGTCTCCAATC TGGATCACTCACGAGCCAGCCACCTCTTGCAGCTGCATTCTCTTGAACCC TCTCCACGCGTCCGTGGTGAACCAGGGCCAACTTTAAGTCGGGATTCCTT CGCGGAAATTCTTCCAGCAGGACCCGTAGAACTAATATCAATATTGTGAC GGGCAGCCGGATGAACTGCTGGGTCACCATTAGTGAGGGACTCCCCTGTA GCACTGGCCTCAGTTCCAGTTGACAGCTTTAGCTTTTACAACGTTAATTA ACCGGAGTGCCCCTTTCAGGCCTTTCAGGCGCAGCCTCATCAGCACGCCA GGATATCATCCCCGTATCCCCGGCATTCAGTCACTCCAAGAATGCCGCAA CATCCTCAGAAAACCCGACCGGTACAACTCAACAGCAGGCGTATTTCGTC ACAGCCATTTTTGGAGAATAGTGGCATTCCTTGAGTATTGGTAGATTTCT CGCCTGACACTACCTACCACTAAATCGGGACCCCAACAAATAGTGCCAGT TGAGTAATACCGATGTCCCTGTATAGTGCCGGTGAAATTGCTTGGCGCGG CTGGAAGCCGGTATAGGGCCGGTACCGGCACTATACCGGGCGTGCTCTGT ATTGTGCCGATTTGGGGGTGTGCGTGCCAGTGAAAAGTGCCGGTTCACCC ACAAAGTATGCACAGTACAGCATTGTTTCGCTTTTGACGAGTCAGACGGA GGCATTGGGTTGGCGGTAGACGAACAATAATCAGAATGACAAATCAAGGT TGACGTACAAACGGCGGACACCTTCATGTTCACATGCTGCTGAAAGGTTC GGTGGTACAGTATAAGCAGCAATTATCTAGTTGTGTGCCAAGCCTGTGAT ACAAGTATCCCTCTGATGCTCGACAGTGCCATGCTTCCAAAACCACACTT ATTGGCACTCACTCAGTTGCCTTCCAGGTGGTACGTGTGAATGTTCGCTT CTATGGCATTTTTGCACACCATGTAGCTCAGGAAGTTCTCGAATAGTGCC GGAACCGGCACTACAGTACAGGGAATCCTCAATCCTTGAAAATTGCGTGT ACCGACGCTATCCAGGCCGAATTCGACATGCTGCCGGTGCCCGGTAAAGT GCCGTTTTTTTGGCTGGACCGTACCGGCACTACACCGGGCCACCTATTGT ACTATTGCTGTGCTTACCTACCGGGACTAAAACACTACGGCAGGACTGTA AATCTTCATCACCTTTTTCATTTGCGGGGTTCCTGTACATGAAGGGTTTC CTTGCACTTTAGCTGTCGGCACGTTCATCTTCAGGAGCTACTATCAAAAG ATTGAAAGAAGAATTACAGAGACGCATCAAGTGGATATGGGAGAACAGAT GAGTCTTTCTCATTCCTTGGATCAATCTCACCATAATCAATCCCCGCAGA TTTCACATTGTTTCCGAGTCTCATGTCTTTCTTGTCCTTCTCTTGGTGTT TTTACGCGGTCCAGCTCGCTGAACCCTCACTGCATGGAATTCAACAAGAG CATATTTTATCCTTTAGCGCCTTCTGAGACGTGGCTCAGAAGGTATTGCT TCGGTGATGTTACTGTTGTTGGGATGGAAAATAGTTTCGACATCAAGCCA GTCAACCCCGAAGCAACTCAAAACCAATTCTTCGCGTCAGTCACGCCAGC ACGGTCGGGATTCGCACATACATGACCCCACAGTTGTCGACCTCGACAGG TGGATCTCATGCCCACGATTTTTGAACGGGACATGAGCTTGGGCGGGCTC TGGAAAAGCGGCAGGTGATTGCCCCACTGTATGTGCTATTTGTGCTGTTT GTGTACGGAGCTCATTTTTGGAACGGTGAAGGTTGCAGCGAGGAGCTTCG CAGCTGTTGTCCGCAGTGCGTAGAAGGGATCTAATTTCAGCACAATGTAC TCCGTTTACATTGGCCTTTTCCGCTTGAATTTTTGGGGGCGGATACCTAC GTCGTCAATATCGGAGCCGCTCAGCACACATGACAAGTCGCTACACCTTC CTGCTATCGCACGATTTTCACATTTTCAGTGGAGGACGGGTCTGGAGCTC GCTAAAAACGAATCTGTCCAAGCACACGTGCTGCTTTTCAGACTTTGGGT GGCCAGAAGACGTTCCGGACTTCCCTTCATCGAGTGAGAGTGCTTGTTGC AGACTGTGGAACGGTTGGCTAAAACTTGCGCCAACTATTACCCTGGGTGC TCCCCCAAAGTTTTGAGACTTGAGTACGCATGTCTTAGATGCCGTAGATT TTCATCGCGATGCGTACCGTGTTTGATGCACCAGCAGTGGACGCGTATCT AGCGTTAGGGTTGTGCCATGATTCGCAGGACGATCTTGCAGGGAACTGGC TGTGCTCCCAAAGCAGAGAGACAACGTGACGTGCTGTTTGGTCCCAACAG CAACAACCCCCCGGCTTCCTTCGCACCGCTTGTGCCGCGGAAACAAACCG ATCAGGCCGGTTCAGGCAGTACATCCAGGACTACGCGACCCGATTTGACC TAGAGCAGCACGTCCGCTTCGGTCATTTCGTGACAGCAGTAACCCCTACC TACCCAGATGGACGTGTTAACTCCAAGGCTCCCATGTGGAGCGTGACCTT CACCTCAACCAGGGACGAGAATCTCCCTACAGGAGATTGTGGCGAAGGAA GCCAGGACGGCGGTTGTGCTATCGTCAAATCATGCACCGGCGAGGGTAAT GTGGTTCACCGAACAGAAATATTCGACAAGTGCATAATCGCCTCCGGGAT ATTCTCGGAGCCCAACCTTCCAGCCGCCAGCAGAGTGGACGGAATCGCAG CTGCGGTAGAGCAAGGCTGGGCCACCCACGGCGCGACCTATCGAGAGCCT CACTCCTACGCTGGCAAGACCGCGCTTGTGGTAGGCTGTGCATTCAGCGG GGCTGAGATCGCAAGCGGTGAGTGGACCAACCTACCGTTCGGTGTTCTTT GAGAGGGGGATGGGTCCCGTGTTCAGTACTTGCAGAAAGCTCTACGAAAT TATTTCCTTTTTTGCTGCCAGGCCATCGATAGAAAGAGCACAAGTATTGT CAGCCTGATTACGTAGCTGGGCTCTGACGACCACCCAGGTATTTCCCTTT ACGACGACGGCCGTGCATTAAAGGCGTTGTTGGTGACACCGTTCCAGTAC TCTCGAAAGAACTATCGCACGAGATCTGCAGCTTACACGAGGCAGCCCCC GAGGATGCTTGAGAGCCTCGCCCTCCATCTCCTCCCTAATTTTCCCGCCT CCCCTCGCCCGATATCATATCCGTCAATGATCAGATTTGAGCGGAGTTAC CAAGCGCTGCCTCGCAGCCACCGGGCACCCTTCTATTTTCCTTCCCCGTT TGGTCGCGGTCGGCACCTCTGGGGGTAAAGCACCTGCTCCTGCTTCTCCG ACCATCATCAGCATTATACCTTCTGCTGAGACCTCCTCTACCGTGAGCGG AGCCGAACCCTCGACGGAAGCGATCGCAGAAACATCAGGAAGTTTTGGCA GCCACAGCCTATCCAAAAGCGACGCAAGGGAGCACCGCTCTGATCAAGAG GGAGAAATTTGCCAGAGAGATGGAGGTCTCGTGGAACCAAACAACTTCAA GGTACCGCTGGATCTGGCGCTGTACTCCCTGAAGTCTTGGACCCAGGGCA AAACCAGCACGGCTTCCGCTTTGGAGAAGCGGGAAGGCGCCCGTAAATTT CTTGTCCAGTTGGCAGGAAGGGACCCCGGTGATGCTCACGAGGCGCTGCG ACTACCAGACAGCGGCAGCGACGACCACCCTCAGGCATCATCCGTGCGAG TTGTCGTGTCGGACGAATTTCTTGATAAGGTACTTGTAGGGCAAATGAGT AAAAAACTGTCTGAAGACCACGGCATGGGATCATGGACTCTTGCTCGTTC TTGACCCCTCGCACAGCAGTGTGGCAGGCTCGTTTTTGTCTTTTCCGACG ACGCGCCATGAGTTCAAGCCGCCGTGTGTACAACACACCAGCTCCATTAC CCGCAGGTTCAAAGATAGGCGAAACTGGCTTCGTATAGCTTTTACTGTTT TAGTGCGTTGAGGTTGGAAAACAACAATCTCTTCGTTGTCTTTCATCCTT CATCCGATGCGATAGTCAGTACATTCTGCCTGATACTCAGCCGTGAGAGC TCGGCGCTCGAACTTGTCCCCGCTCAGTCACATGCTTGTTCCGAGTTTAG CAAAAAATGACGTCCTTCCTCTGTTTGGTGCCGAAGGACACACGGCAAGG AAATGGAAAAGGACCTTTTGCCTGGGTTGAGCCAAACAGGCGGAATTTTT TTCTTAGTTTACTCTTCGCTACGTGCGCCTTGGTTGATCCACAGGTTCAG GACGGCTCTATCGAAATTCGATCGAGATTGACCGCTTTGGATCTCAAGGA GAAGACAGCGAGGTTCTCAGATGGCACCTGCACCAGTGTGAGAAAGTCGT TGTCGTGGCACGATAAACCGTATGCATATGCTTCGATGTCGTGCTCCGCG AAAGTCAGTTACGCTCCATGCCGCCAGCTTTGCGTGCAACTGCGAGCGTG CGCCCACACGCTCACACGGCACGTGTCAGCGAGGTCGCCCAGTATTCTCT CGATAGGATAGCGGCCGTCTCTATGTCCAACCATTGACTCGCTGCTTCGG GGGACGTTTCTAAGCAGTAGATCGAGCCGAGTGTCTCACCTCCATAATGG AGATGGAGAAACGTGATAGATGCTGAATTTCTTGCCTATCATGTTCTGAT CGGCACGCTCGTGTCGAGAAATCCAGGGTTCCCGATCAGCTTATCGAGGG TTGGGCGATGATGCTTACAGTGCACAACGTCTCGATGTCTCGATTGGTGC GCGAACATGACACGGCTTCGCTTGGTATCGGAGATAAAAGCAACCATCTG TGCGCACGCAAGCGTTCGAGCCTCAGCACCAGGACTTCGAACACGGTCTG TCGTCAATTGGTGAGTGTTCGTGAAATGCGCCGCGGTGTTTGTGAATCAG GTGGATCACGTCATCTTTTGCACGGGGCTGCGGCCACGTCTAAGCTTCCT GCCGGAAGAGCTACTGCGCTTGCTCGAGTTCGACGAGAATGATCTCCTCC AGCCGCTTATACTTCACCTGCAGACGTGGAATCCTCGCGTCCCTGGCCTG GGTTTTGTCGGGGTGTACAGAGGGCCGTACTTCGGCTCGATGGAGCTCCA GGCACGGTGAGGCGCCCATGACGAAGCTACCATGCGCATACGGCGTGCAT GCGACGTACAGCCTCATGCTAGATCATCGATGATGTTTCAAATGAAGCGT TCTCGTCCGTTACACCCCTTAAGATCATGTGATGCTGTCGAACAAAAGCC GTGGTGTCGGTCACCCCTTCGCTGGGAGTTGTGGAAACACGGGCTGTAGC CCACTATACGCCTAACAAGGCGGTGCCTGGTGCTCTTACCCAGGTGGCTG ACGCGCATGTGGGCCGGTGTGGTGCTCCCGCCGACGGAGGCGGCCAGTAT CGGAGCCTTGGAGGAAGCACGATCGGTTCGGAGCTCCACACCTCGGCCTC AGTTTCCGACGGTAGGACCCATTTCAAACAATGTTGTGTTGTGAAATTGA ATCACTGCTTCGATTCTTGATGCGTCCGCCGAGTGCTCCTGGTGCTTATC AGTGACCCGAGTTTGGTCCGCCTGTTTTCGAGTAATCCACCTTGAGGTAA GGTTGCGATCATCGGTTTCCAGGTTCGAACACGGGTGCACGCAACCAGGG TCACTTCTGGGAAACATGAAAATTGAAGCGGGTTTGCTATCGGTTTGACC TCACTCTCGAATACGCATCGCCTGCGCTACAGGACTATGTGGATTTGATG GAAGGCCTGGCCTCTGTAGCCGGGTTGCTACCGTCCAAGCAGCATATGCA AGCTGAAGATCGATGGGAAGGTCTCCCCACCGAGGGTTCCATGGATTGCT CTGGAGATCGTATTTCAGGGTCCGCCGTCCCCCCTTCTAGCGGCGGAACA GACCATGTGACGAGCCTCCCTTCAGATCTTGCCGAAGCAACGGCTTCTGG TTTGCGGACAAATGCGCTCGATTCGGTAGTGGCGAGCAACTGTCTCACAG AGGCATCGGATGCCGATGATGCAACTGTTGATGCCGTTCAAAACGCACGA ACTATGATGAGAGCCCTCGGCAGGCTGATTCGGGCAGAGGTTGCGCCGGG ACAGCAGGACGAGGACGACAGGGCCCAAGAGGAAAAAGCAATGCGCTTGC TGAAAGAATGGATGTGGAGCGGGCCTTTCCTGCCTTGCCACTATCACGTT CGACAGTTCCTGCCATTGGACGGAGGGTCACGTGATGCAATAATCATGTC GCAGAGTTCGCCGGGTGAAGCACCCAATGCAGCTCGTCCCAGACTGTGTG GCAGCGTCGAAGACACGCTTGACGTGGTGTATCAGGCCATCGCGGAGATC CAGTATGTCAACGAGAAGTTAGAAAAGGCTCATCGAGCATTTTCGTGAAC TTTGTGCACGGAGCAGCGATCACCGTGTGGCATGGAGTTGTTTGGGATAC CCGTTTGGGATACCCGGTGCTTCATCCCGATGTACATACAAACTTCCTGA TGCTGGGAGAGACTGCTCGAGGTGTTTGGTGTCGGACCAGGGGCCAATCA CCCCCCACGCTGGATGCGCCTGTCTCGCGCAGTCGGCTCTGGAAGAACCG AGTAGCGAGTAGTTGACGACGCTCTCCGCTCTCAGGTAGCTGGAACCAGC GGTTCGCCACAGGCGTGCAGCTTGTTTACGTGCCAATATCCTCCGTCACC CAGGTCCTTCAAGACTGACTGATGGGATGTGAATGACTACTTTCGGTGAT ACTACGACCAGCACCACAGCGCGCCCACGACCAGCGTGACGGCGAGTGAT CGAATGTTCCGATGGGGAGTCGTCCATGTTAAGCGATGCTGCCCGCCCAC CTAGCTTTTGTTACCGTTTCAGAGAGAAAACAGGTCGAGCGGATGAGTCC TAGGACGTTGCCGAGAAAATGCGCAATCTGTGTCAACGGAAATCCTTGTC CATGGAAGCACCACGGAAGGAGAACTGAGTGTTCCTTTCGGTCTATCTAT CAGATTGCCTGTGCATTGGTCGCGGATTGTCCGGTCGAACGCGCGGCGGA CGATTCCATACCGCTGGCGATGTAGACTATTTTATTACGAAGAGCAGTTT TGAGTGAGGATTGCTGCTGGAATGCTGTCCTTCCTGCAACACGCCCGATG TGGGAAGAATTGACTGGCACAACATCACTCCGCTAGCTAAAGATCACTGG CACCCACAGAGCTTTCAGTGGTGAAGTATTGTCCAATGTCGGCAAACGAC ACGGCCGTGAGAAGAAAATCTCTATTCCGTTCTTCAACCAGCGTCCGTGC AGTATCTATCCATCTATTTGGGCCGAACAAGGATGCGTCAGGCCCTGTCG GTGTTGATGAAAAATGAAAATCTGTTTCTCATCGCTCAAAAATCAGAATC TGTCGGCGTTT
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1232:5279..18839-

>mRNA_H-canaliculatus_F_contig1232.1984.1 ID=mRNA_H-canaliculatus_F_contig1232.1984.1|Name=mRNA_H-canaliculatus_F_contig1232.1984.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4500bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1232:5279..18839- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCCACGATTTTTGAACGGGACATGAGCTTGGGCGGGCTCTGGAAAAG
CGGCAGATGCCCACGATTTTTGAACGGGACATGAGCTTGGGCGGGCTCTG
GAAAAGCGGCAGTGGAGGACGGGTCTGGAGCTCGCTAAAAACGAATCTGT
CCAAGCACACGTGCTGCTTTTCAGACTTTGGGTGGCCAGAAGACGTTCCG
GACTTCCCTTCATCGATGGAGGACGGGTCTGGAGCTCGCTAAAAACGAAT
CTGTCCAAGCACACGTGCTGCTTTTCAGACTTTGGGTGGCCAGAAGACGT
TCCGGACTTCCCTTCATCGAGCCGGTTCAGGCAGTACATCCAGGACTACG
CGACCCGATTTGACCTAGAGCAGCACGTCCGCTTCGGTCATTTCGTGACA
GCAGTAACCCCTACCTACCCAGATGGACGTGTTAACTCCAAGGCTCCCAT
GTGGAGCGTGACCTTCACCTCAACCAGGGACGAGAATCTCCCTACAGGAG
ATTGTGGCGAAGGAAGCCAGGACGGCGGTTGTGCTATCGTCAAATCATGC
ACCGGCGAGGGTAATGTGGTTCACCGAACAGAAATATTCGACAAGTGCAT
AATCGCCTCCGGGATATTCTCGGAGCCCAACCTTCCAGCCGCCAGCAGAG
TGGACGGAATCGCAGCTGCGGTAGAGCAAGGCTGGGCCACCCACGGCGCG
ACCTATCGAGAGCCTCACTCCTACGCTGGCAAGACCGCGCTTGTGGTAGG
CTGTGCATTCAGCGGGGCTGAGATCGCAAGCGGCCGGTTCAGGCAGTACA
TCCAGGACTACGCGACCCGATTTGACCTAGAGCAGCACGTCCGCTTCGGT
CATTTCGTGACAGCAGTAACCCCTACCTACCCAGATGGACGTGTTAACTC
CAAGGCTCCCATGTGGAGCGTGACCTTCACCTCAACCAGGGACGAGAATC
TCCCTACAGGAGATTGTGGCGAAGGAAGCCAGGACGGCGGTTGTGCTATC
GTCAAATCATGCACCGGCGAGGGTAATGTGGTTCACCGAACAGAAATATT
CGACAAGTGCATAATCGCCTCCGGGATATTCTCGGAGCCCAACCTTCCAG
CCGCCAGCAGAGTGGACGGAATCGCAGCTGCGGTAGAGCAAGGCTGGGCC
ACCCACGGCGCGACCTATCGAGAGCCTCACTCCTACGCTGGCAAGACCGC
GCTTGTGGTAGGCTGTGCATTCAGCGGGGCTGAGATCGCAAGCGATTTGA
GCGGAGTTACCAAGCGCTGCCTCGCAGCCACCGGGCACCCTTCTATTTTC
CTTCCCCGTTTGGTCGCGGTCGGCACCTCTGGGGGTAAAGCACCTGCTCC
TGCTTCTCCGACCATCATCAGCATTATACCTTCTGCTGAGACCTCCTCTA
CCGTGAGCGGAGCCGAACCCTCGACGGAAGCGATCGCAGAAACATCAGGA
AGTTTTGGCAGCCACAGCCTATCCAAAAGCGACGCAAGGGAGCACCGCTC
TGATCAAGAGGGAGAAATTTGCCAGAGAGATGGAGGTCTCGTGGAACCAA
ACAACTTCAAGGTACCGCTGGATCTGGCGCTGTACTCCCTGAAGTCTTGG
ACCCAGGGCAAAACCAGCACGGCTTCCGCTTTGGAGAAGCGGGAAGGCGC
CCGTAAATTTCTTGTCCAGTTGGCAGGAAGGGACCCCGGTGATGCTCACG
AGGCGCTGCGACTACCAGACAGCGGCAGCGACGACCACCCTCAGGCATCA
TCCGTGCGAGTTGTCGTGTCGGACGAATTTCTTGATAAGATTTGAGCGGA
GTTACCAAGCGCTGCCTCGCAGCCACCGGGCACCCTTCTATTTTCCTTCC
CCGTTTGGTCGCGGTCGGCACCTCTGGGGGTAAAGCACCTGCTCCTGCTT
CTCCGACCATCATCAGCATTATACCTTCTGCTGAGACCTCCTCTACCGTG
AGCGGAGCCGAACCCTCGACGGAAGCGATCGCAGAAACATCAGGAAGTTT
TGGCAGCCACAGCCTATCCAAAAGCGACGCAAGGGAGCACCGCTCTGATC
AAGAGGGAGAAATTTGCCAGAGAGATGGAGGTCTCGTGGAACCAAACAAC
TTCAAGGTACCGCTGGATCTGGCGCTGTACTCCCTGAAGTCTTGGACCCA
GGGCAAAACCAGCACGGCTTCCGCTTTGGAGAAGCGGGAAGGCGCCCGTA
AATTTCTTGTCCAGTTGGCAGGAAGGGACCCCGGTGATGCTCACGAGGCG
CTGCGACTACCAGACAGCGGCAGCGACGACCACCCTCAGGCATCATCCGT
GCGAGTTGTCGTGTCGGACGAATTTCTTGATAAGGTTCAGGACGGCTCTA
TCGAAATTCGATCGAGATTGACCGCTTTGGATCTCAAGGAGAAGACAGCG
AGGTTCTCAGATGGCACCTGCACCAGTGTTCAGGACGGCTCTATCGAAAT
TCGATCGAGATTGACCGCTTTGGATCTCAAGGAGAAGACAGCGAGGTTCT
CAGATGGCACCTGCACCAGTGTGGATCACGTCATCTTTTGCACGGGGCTG
CGGCCACGTCTAAGCTTCCTGCCGGAAGAGCTACTGCGCTTGCTCGAGTT
CGACGAGAATGATCTCCTCCAGCCGCTTATACTTCACCTGCAGACGTGGA
ATCCTCGCGTCCCTGGCCTGGGTTTTGTCGGGGTGTACAGAGGGCCGTAC
TTCGGCTCGATGGAGCTCCAGGCACGGTGGATCACGTCATCTTTTGCACG
GGGCTGCGGCCACGTCTAAGCTTCCTGCCGGAAGAGCTACTGCGCTTGCT
CGAGTTCGACGAGAATGATCTCCTCCAGCCGCTTATACTTCACCTGCAGA
CGTGGAATCCTCGCGTCCCTGGCCTGGGTTTTGTCGGGGTGTACAGAGGG
CCGTACTTCGGCTCGATGGAGCTCCAGGCACGGTGGCTGACGCGCATGTG
GGCCGGTGTGGTGCTCCCGCCGACGGAGGCGGCCAGTATCGGAGCCTTGG
AGGAAGCACGATCGGTTCGGAGCTCCACACCTCGGCCTCAGTTTCCGACG
GTGGCTGACGCGCATGTGGGCCGGTGTGGTGCTCCCGCCGACGGAGGCGG
CCAGTATCGGAGCCTTGGAGGAAGCACGATCGGTTCGGAGCTCCACACCT
CGGCCTCAGTTTCCGACGGACTATGTGGATTTGATGGAAGGCCTGGCCTC
TGTAGCCGGGTTGCTACCGTCCAAGCAGCATATGCAAGCTGAAGATCGAT
GGGAAGGTCTCCCCACCGAGGGTTCCATGGATTGCTCTGGAGATCGTATT
TCAGGGTCCGCCGTCCCCCCTTCTAGCGGCGGAACAGACCATGTGACGAG
CCTCCCTTCAGATCTTGCCGAAGCAACGGCTTCTGGTTTGCGGACAAATG
CGCTCGATTCGGTAGTGGCGAGCAACTGTCTCACAGAGGCATCGGATGCC
GATGATGCAACTGTTGATGCCGTTCAAAACGCACGAACTATGATGAGAGC
CCTCGGCAGGCTGATTCGGGCAGAGGTTGCGCCGGGACAGCAGGACGAGG
ACGACAGGGCCCAAGAGGAAAAAGCAATGCGCTTGCTGAAAGAATGGATG
TGGAGCGGGCCTTTCCTGCCTTGCCACTATCACGTTCGACAGTTCCTGCC
ATTGGACGGAGGGTCACGTGATGCAATAATCATGTCGCAGAGTTCGCCGG
GTGAAGCACCCAATGCAGCTCGTCCCAGACTGTGTGGCAGCGTCGAAGAC
ACGCTTGACGTGGTGTATCAGGCCATCGCGGAGATCCAGTATGTCAACGA
GAAGTTAGAAAAGGCTCATCGAGCATTTTCGTGAGACTATGTGGATTTGA
TGGAAGGCCTGGCCTCTGTAGCCGGGTTGCTACCGTCCAAGCAGCATATG
CAAGCTGAAGATCGATGGGAAGGTCTCCCCACCGAGGGTTCCATGGATTG
CTCTGGAGATCGTATTTCAGGGTCCGCCGTCCCCCCTTCTAGCGGCGGAA
CAGACCATGTGACGAGCCTCCCTTCAGATCTTGCCGAAGCAACGGCTTCT
GGTTTGCGGACAAATGCGCTCGATTCGGTAGTGGCGAGCAACTGTCTCAC
AGAGGCATCGGATGCCGATGATGCAACTGTTGATGCCGTTCAAAACGCAC
GAACTATGATGAGAGCCCTCGGCAGGCTGATTCGGGCAGAGGTTGCGCCG
GGACAGCAGGACGAGGACGACAGGGCCCAAGAGGAAAAAGCAATGCGCTT
GCTGAAAGAATGGATGTGGAGCGGGCCTTTCCTGCCTTGCCACTATCACG
TTCGACAGTTCCTGCCATTGGACGGAGGGTCACGTGATGCAATAATCATG
TCGCAGAGTTCGCCGGGTGAAGCACCCAATGCAGCTCGTCCCAGACTGTG
TGGCAGCGTCGAAGACACGCTTGACGTGGTGTATCAGGCCATCGCGGAGA
TCCAGTATGTCAACGAGAAGTTAGAAAAGGCTCATCGAGCATTTTCGTGA
back to top