mRNA_H-canaliculatus_F_contig12291.1962.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A6H5JV15_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV15_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.200e-49 Identity = 83/113 (73.45%), Postives = 101/113 (89.38%), Query Frame = 1
Query: 1 YEGSEDGETEGHQQRQHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEGVAKGESGAGISFLND 339
Y+ SED E EG ++RQ +AA+RAIRADIKTYTEDVP+SQ ERFSAF+ +FDLG+RTK++AT+L+EDPVVT+IHTQLVPEHLTYDDFWTRYFFRAE VAKG++G G+SF N+
Sbjct: 10 YDDSEDDEAEGGRRRQ-PVTAAIRAIRADIKTYTEDVPDSQSERFSAFVAKFDLGARTKDVATILKEDPVVTKIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNE 121
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: D8LDU7_ECTSI (BSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU7_ECTSI) HSP 1 Score: 179 bits (455), Expect = 2.440e-48 Identity = 139/230 (60.43%), Postives = 157/230 (68.26%), Query Frame = 1
Query: 28 EGHQQRQHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEGVAKGESGAGISFLNDDXXXXXXXXXXXXXXXXXXXG----NPSGDAPDLP--PSRXXXXXXXXXXXXXXXXXXXXXXRGGGPAAPAGGALGAMLPEPERSTADERASLRVRGSAGGGVKSLASAAAMAEIARLTAALRESE 699
EG + RQ +AA+RAIRADIKTYTEDVPESQ ERFSAF+ +FDLG+RTK++AT+L+ED VVT+IHTQLVPEHLTYDDFWTRYFFRAE VAKG++G G+SF N+DXXXXXXXXXXXXXXXXXXX N G DLP PSR G G A P GGALGAM P+ VK+LASAAAMAEI+RLTAALR SE
Sbjct: 51 EGERNRQ-PVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDTVVTKIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNEDXXXXXXXXXXXXXXXXXXXXXADFNDHGADDDLPSPPSRSSPSATAAARAPARDLSPHA---GDGAAGPPGGALGAMRPDSPXXXXXXXXXXXXXXX----VKTLASAAAMAEISRLTAALRASE 272
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A7S2WTQ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.520e-18 Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 1
Query: 37 QQRQHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEGVAKGESGAGISFLNDD 342
Q +Q ++SA LRA++AD KTY++ V + + F +F +FDL +T I+ LL ++PVV IH +LVPEH++ + FW RYFFRAE K + F++++
Sbjct: 73 QGKQDRSSAGLRALQADKKTYSDPVANADQAHFQSFSTKFDLAEKTTTISELLSDEPVVARIHAELVPEHVSAETFWMRYFFRAERFMKPGQSLALGFVDEE 174
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A6U4E8C6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4E8C6_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.650e-17 Identity = 41/96 (42.71%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 61 AALRAIRADIKTYTEDVPESQRERFSAFLERFDL--GSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEGVAKGESGAGISFLNDD 342
AA++ +RAD+KTYTE +P +++ F AFL+ FDL + + +I+ LL+EDP ++++HT++VP ++Y+ FWTRYFFR + +G I DD
Sbjct: 54 AAVKLLRADLKTYTEPIPAAEQADFEAFLDGFDLMGEASSADISQLLEEDPTLSQVHTEVVPRVVSYEAFWTRYFFRLSKLQQGGGRTPIKLAFDD 149
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A7S3YEL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEL0_HETAK) HSP 1 Score: 84.7 bits (208), Expect = 9.670e-17 Identity = 36/75 (48.00%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 61 AALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFR 285
AAL+A++ DI TY E++ + + F F +R D+ ++TKEI+ LL+ +PVV ++ TQLVP+ ++YD FWTRY+FR
Sbjct: 67 AALKALQNDINTYQEEISDQELMEFRMFEQRLDVSAKTKEISELLKSNPVVAQLQTQLVPDEISYDTFWTRYYFR 141
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A1W0A1Z8_9STRA (BSD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1Z8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 8.530e-10 Identity = 30/80 (37.50%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 46 QHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFR 285
Q +A+ L A+ +++ + E + AF + FDL +T+E+A++L+ED ++++HT +VPE L+Y +FWTRY+FR
Sbjct: 33 QDEANTILNAMSLQEINPVDEIIFEELEDYKAFQDVFDLDDKTEEVASILKEDEYISDLHTAMVPEQLSYKEFWTRYYFR 112
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A024UB54_9STRA (BSD domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UB54_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.090e-9 Identity = 31/80 (38.75%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 46 QHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFR 285
Q +A L+ + +++ + E + AF E FDL +T ++A++LQ+D +V ++HT LVPE L+Y +FWTRY+FR
Sbjct: 26 QDEAQLLLKTMSQAQTNPVDEIIFEELEDYKAFQEVFDLDLKTDDVASILQKDELVADLHTALVPEQLSYKEFWTRYYFR 105
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A1V9ZAX5_9STRA (BSD domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAX5_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 7.040e-9 Identity = 28/80 (35.00%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 46 QHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFR 285
Q +A L ++ + +D+ + + + F + FDL +T+E+A +L+ED ++++HT +VPE L+Y +FWTRY+FR
Sbjct: 37 QDEAQTLLNSMSLQQQNPVDDIIFEELDDYKDFQDVFDLDDKTEEVAEILKEDTYISDLHTAIVPEQLSYKEFWTRYYFR 116
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: A0A485KAV9_9STRA (Aste57867_2813 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAV9_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.020e-8 Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 46 QHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFR 285
Q +A L+ + +++ + E + AF E FDL +T ++A +LQ D V+++HT +VPE L+Y +FWTRY+FR
Sbjct: 28 QDEAQHLLKTMNQMQTNPVDEIIFEELEEYKAFQEVFDLDMKTDDVAAILQTDEFVSDLHTAMVPEQLSYKEFWTRYYFR 107
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Match: T0QSM8_SAPDV (BSD domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QSM8_SAPDV) HSP 1 Score: 65.9 bits (159), Expect = 1.250e-8 Identity = 27/80 (33.75%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 46 QHKASAALRAIRADIKTYTEDVPESQRERFSAFLERFDLGSRTKEIATLLQEDPVVTEIHTQLVPEHLTYDDFWTRYFFR 285
Q +A L ++ +++ + + + AF + FDL +T+E+A +L++D ++++HT +VPE L+Y +FWTRY+FR
Sbjct: 37 QDEAQTLLNSMSLQQDNPVDEIIFEELDDYKAFQDVFDLDDKTEEVAAILKDDTYISDLHTAMVPEQLSYKEFWTRYYFR 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12291.1962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12291.1962.1 >prot_H-canaliculatus_F_contig12291.1962.1 ID=prot_H-canaliculatus_F_contig12291.1962.1|Name=mRNA_H-canaliculatus_F_contig12291.1962.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=274bp YEGSEDGETEGHQQRQHKASAALRAIRADIKTYTEDVPESQRERFSAFLEback to top mRNA from alignment at H-canaliculatus_F_contig12291:331..3475- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12291.1962.1 ID=mRNA_H-canaliculatus_F_contig12291.1962.1|Name=mRNA_H-canaliculatus_F_contig12291.1962.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3145bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12291:331..3475- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12291:331..3475- >mRNA_H-canaliculatus_F_contig12291.1962.1 ID=mRNA_H-canaliculatus_F_contig12291.1962.1|Name=mRNA_H-canaliculatus_F_contig12291.1962.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1644bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12291:331..3475- (Hapterophycus canaliculatus Oshoro5f female)back to top |