mRNA_H-canaliculatus_F_contig1229.1961.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 800 bits (2066), Expect = 1.190e-259 Identity = 663/1304 (50.84%), Postives = 759/1304 (58.21%), Query Frame = 3
Query: 6 DVRDVATDSQKLALAMSSDTPDACYTVRRLLSDHAPMVKPLHLTLLAITAKLEL-VKTRKEELVALTKMCTFLAAAFVIXXXXXXXXXXXXXXXXXXXKLSRGIPTPST-KSSDGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVERKGKRRKALMRITESSG-KNEIVDLNARVLDLAKEMGLAGIVAVFKGVLDDTGAGGYGSQPDG-GDVLTPQEVSLARQPKPFVERARVPCLVPPREGWHVRRDRVINAVLESLLSNRGRCSDRCGGGXXXXXXXXXXXXXXTVDVEGREGVTGTARPRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEA--------------------GXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRD-----------GGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALL-------QARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATG----RRRGGKS-TSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQRAQTPNVLYPLWELVTAAERSGKPEEAAEWRQYGYETLNLAM--------------SGRLK-------------------------------------------------EAEQLLRRALKIAETKLGEEDVLVARTVFHLGVCLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCESPPPXXXXX---------------------------------SSGRHRLEESTALFAHALEIREARLDPDDAAVGNTLHELGVCLRQDGRQEEAEAFLRRALGIRKAMTQRLGRGRKGSSGAGSVATADETGAXXXXXXXXXXXXXXXXXXXXXXXXXXNNGSFEDSVVCTLFQLGLCVLQRGRRLEEAETMLRSVLEIEKERL 3488
DVRD+A DSQKLA+AM+S TPDA YTV+RL++DH+P VK +H +LLAITAK++L VKTR+EEL+A+ KMCT +AAA V+ XXXXXXXXXX+ G T +S+ S XXXXXXXXXXXX LV RK RR+ L+R + SS K+EI DLN RVLD A+EMGLAGI+AVFKGVL+DTG GGYGS P G DVLT QEV LARQPK RARVP L+P RE WHVRR+ VI VL SLLS G + R XXXXXXXXXXXXXX E A PRVVGLVGESG+GKT+ AAEIVR PEVLEYFSDGVVWLPVN GDGD DRL +LM+ LAR++ EE+G +H G XXXXXXXXXXXXXX + HGG RQRR LRCLV DNVCEA+VVA L ETG+WVLLTTR DV+ + GGK VV+GRLLE DA+WVLRRASELP DEP P GA +L+ELCGRT LDLAFVGRWSTV GSKDPMAWR+AADSIRA+L NLELTR+ G ++DGA + GS+ RE++RKAILRAGFR+L + GDD RLLYLSL VLPDGH+FTVKDA VLL HG G XXXXXXXX RR L+ LEA IL A+G RRR S +S+RMH AHS+FAREILL+C ++L AV RW+GF+SSLDAVLFFDP L+RLWSAVE+VGGKGWR+ PYE AL +IDN DPLCRVCLVAVAKFRGAEGD+ AS +WRRLL VEQRAQ PNV+YP+WELV AAE GKPEEAA WR+YG ETLNLAM SG EAE +LRRAL+I + G +D VA T+ LGVC+R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX G LR+DGR +EAEAFLRRALGI++A G ++GAG A XXXXXXXXXXXX NG EDSV +FQLG+CVLQ GRRLEEAET+LR+ L++E +RL
Sbjct: 26 DVRDLAADSQKLAIAMASKTPDAQYTVQRLVADHSPAVKGIHESLLAITAKIDLEVKTRREELLAVAKMCTLVAAASVVVVSQEHEQEXXXXXXXXXXEQRHGPSWKGTARSATCGSDNXXXXXXXXXXXXCSERMMRLLDVGPLRECVEALGFLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTG-GGYGSSPGGISDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXE--------AGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVGRWSTVCGSKDPMAWRNAADSIRAELNNLELTREDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXIEDGAPASVITGSEXXXXXXXXXXXXXXXXXXXXXXXHGRESQRKAILRAGFRDLVSVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLL------HGDGSARCGDGIVAAAGGRGXXXXXXXXXXXX----------RRVLRVLEARGILTASGGRGGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAENGGKPEEAAAWRRYGRETLNLAMVKSTMVPPETGARDSGXXXXXXXXXXXXXXXXXXXXXXXXXPKRSADTASVLRSLALNIVRFGPSHGVEAEMMLRRALEIEVARRGPDDPQVAVTLGRLGVCVRQAGRLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSRGGGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGGVAATGAGGARPA-------LSRRSSSGSXXXXXXXXXXXXSSNRNGVDEDSVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRL 1297
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: D8LJY3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY3_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 4.900e-126 Identity = 358/666 (53.75%), Postives = 402/666 (60.36%), Query Frame = 3
Query: 1638 MAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGS-------------------------------------------DASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGRRRGG-KSTS----YRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQRAQTPNVLYPLWELVTAAERSGKPEEAAEWRQYGYETLNLAMSGRLKEAEQLLRRALKIAETKLGEEDVLVARTVFHLGVCLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSCESPPPXXXXXSSGRHRLEESTALFAHALEIREARLDPDDAAVGNTLHELGVCLRQDGRQEEAEAFLRRALGIRKAMTQRLGRGRKGSSGAGSVATADETGAXXXXXXXXXXXXXXXXXXXXXXXXXXNNGSFEDSVVCTLFQLGLCVLQRGRRLEEAETMLRSVLEIEKERLG 3491
MAWRDAADSIRA+L NLELTR+ DD + V+V G RA RE++RKAILRAGFR+L GDD RLLYLSL VLPDGH+FTVKDA VLL HG G XXXXXXXXXXX RR L+ LEA IL A+G R G KSTS +RMH AHS FAREILL+C ++L AV RW+GF+SSLDAVLFFDP L+RLWSAVE+VGGKGWR+ PYE AL +IDN DPLCRVCLVAVAKFR AEGD+ AS +WRRLL VEQRAQ PNV+YP+WELV AAE+ GKPEEAA WR+YG ETLNLAM+GRLKEAEQLLRRAL I E +LGE+D VART+FHLGVCLR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LS + G LR+DGR +EAEAFLRRALGI++A G ++GAG XXXXXXXXXXXXXXXXXXXX NG EDSV +FQLG+CVLQ GRRLEEAET+LR+ L++E +RLG
Sbjct: 1 MAWRDAADSIRAELNNLELTRED-------------------------DDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAQHGRESQRKAILRAGFRDLVGVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLL------HGDGSARCGDGMAAASAXXXXXXXXXXXXXXXXX--------RRVLRVLEARGILTASGGRGGRRKSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPSALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMAGRLKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLSSQG--------GGGDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGGVAATGAGXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXNRNGVDEDSVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLG 612
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 5.360e-113 Identity = 305/825 (36.97%), Postives = 390/825 (47.27%), Query Frame = 3
Query: 468 ERKGKRRKALMRITESSGKNEIVDLNARVLDLAKEMGLAGIVAVFKGVLDDTGAGGYGSQPDGGDVLTPQEVSLARQPKPFVERARVPCLVPPREGWHVRRDRVINAVLESLLSNRGRCSDRCGGGXXXXXXXXXXXXXXTVDVEGREGVTGTARPRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGRRRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQR---AQTPNVLYPLWELVTAAERSGKPEEAAEWRQYGYETLNLAMS--------------------------------GRLKEAEQLLRRALKIAETKLGEEDVLVARTVFHLGVCLR 2837
ER +R K I S K+EI LN+ V L ++GLAGI AV +G +DD L + L P+ F + A VP P R+ WHV R + VL++L G+ R VV L G SGSGKT++AAEIVRS EV E FSDG+VWLPVN +G + RL +LM LAR+V EEIG G + SED A +K + G H G R L+CLVVADNV E DVV+KL ETGMWVLL+TR VV+++ GK+VVV L +ADAE VL+RA+ELP + P A DL++LCGR A+D+AFVGRWSTVRG DP +W DAA +IR +++ VG D D D++ P+ RRKAIL+ GF +LA G+ D+RV+ LYLSL V+PDGH F++KDA VLL + +E +A + LE WSI+ R + T YRMH AH+ FARE LL+ V + A++RW ++SSLD + D VL LW A+E +GG GW + PYE AL + D L R AV F+ A+ D ASA WRRLL VE+R A P VL L AER G EEAA+W + E L LA++ G AE LLRR+L + E LG E + VA T+ LGV R
Sbjct: 106 ERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGI-AVLEGKVDDMKK-----------TLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDAL--------------------------------------NGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVN--EGAKKRLPSLMLQLARMVHEEIG-------------------------------GSVGRVPSASEDSATYIKQRLEEG--HKG----RRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEK----------VGHDPDN---------------------------DSAENIPA-------------KRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDR-----------------------------------SPSTEDEASAGGVVDVLERWSII------RSAQGT-YRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAR 749
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 372 bits (955), Expect = 2.220e-106 Identity = 301/829 (36.31%), Postives = 387/829 (46.68%), Query Frame = 3
Query: 483 RRKALMRITESSG-KNEIVDLNARVLDLAKEMGLAGIVAV------FKGVLD--DTGAGGYGSQPDGGDVLTPQEVSLARQPKPFVERARVPCLVPPREGWHVRRDRVINAVLESLLSNRGRCSDRCGGGXXXXXXXXXXXXXXTVDVEGREGVTGTARPRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKA-GGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGRRRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFD-PLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQR---AQTPNVLYPLWELVTAAERSGKPEEAAEWR---------------------------------QYGYETLNLAMSGRLKEAEQLLRRALKIAETKLGEEDVLVARTVFHLGV 2828
RR L R+ +++ K EI L R+ DL ++ LAGI V K +L+ DT SQ L ++ AR A VP P R+ WHV R V+ AV ++L G PR+VGLVG+SGSGKT+ AAEIVRS EV E FSDG+VWL VN DG +RL+ALM LAR+V E+IG G G PAG +DGAA + + G HGG + L+CLVVADNV E V++KL ETGMWVLL+TR +VR A GG V V L E DA VLRRASEL + P A +L+ELCGR A+D+AFVGRWSTVRG D AW DAA +R+ ++ ++ + + R RRKA+L+AGF +LA G+ D+R+ LYLSL VLPDGH FT KDA LL + +E + ++TLE WS L R GG +YRMH AHS FAR+ +++ V K AV+RW +SSLD + FD P VL LW AV +GG+ WR + PY AALS +D +PL L ++ F+ A+GD++ AS RR+LAV++R A P+ + L LV AER G EE EW+ LNLA R AE L+R +L+I E KLG +DV VA + HLGV
Sbjct: 96 RRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQ-----TLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGG--------------------------------------PRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVN--DGATERLRALMMHLARVVFEDIG-----GSVGRR------------------PAGL--------DDGAAYTRQRMQSG--HGG----KGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDN-----------------------------------------------------VWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDR-----------------------------------APCPEDEVSTEELIRTLERWSAL----RTEGG---AYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDR-GNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGV 746
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 369 bits (947), Expect = 8.250e-105 Identity = 261/686 (38.05%), Postives = 344/686 (50.15%), Query Frame = 3
Query: 909 EGVTGTARPRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAA-----RVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGRRRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDN-RDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQR---AQTPNVLYPLWELVTAAERSGKPEEAAEWRQYGYETLNLAM--------SGRLK--------------------------EAEQLLRRALKIAETKLGEEDVLVARTVFHLGVCLR 2837
EG+ PR+VGLVG SGSGKT++A+E VRS EV E FSDG+ WL VN DG ++RL +LM LAR+V E+IG C+ S D A R+K GG ++L+CLVVADNV E +VV+KL ETGMWVLL+TR +V +A G+ V V L EADA VLRRA+ELP P A DL+ELCGR A+DLAFVGRWSTVRG +D MAW DA +R ++ + GS +S + L + R+ RRKAILRAGF +LA G+ D+RV+ LYLSL V PDGH FTV+DA VLL + + +E + + TLE W++L + + +YRMH AHS FARE L++ V + AV+RW+ IS L+ + DP VL LW AVE VGG GW + Y AAL +D L R ++A+A+ + A D+ AS WRRLL +E++ A +VL L + AE+ G+ EAA+WR E L LA+ SG+++ +AE LLRR+L+I E LG ED+ VA T++ LG+CLR
Sbjct: 59 EGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVN--DGAKERLSSLMLQLARVVYEDIG--------------------------------CSVGRRPTSSDDCAAYIRQRMKKGTGG----------KKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKV-----------------------------------------GSGDASEK---------LAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDR-----------------------------------EPCAEDEASVAVVVDTLERWTVLRS-------EQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLR 608
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 365 bits (938), Expect = 1.720e-102 Identity = 259/671 (38.60%), Postives = 343/671 (51.12%), Query Frame = 3
Query: 933 PRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGRRRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSID-NRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQ---RAQTPNVLYPLWELVTAAERSGKPEEAAEWRQYGYETLNLAMS--------------------------------GRLKEAEQLLRRALKIAETKLGEEDVLVARTVFHLGVCLR 2837
P +VGLVG+SG+GKT+ A+ IV S V E FSDG+VWLPVN +G D L LM LA++V E+IG G G P+G S+DG A VK V G HGG + L+CLVVADNV E+DVV++L ETGMW+LL+TR ++V++A G+ V V L EA+AE VLRRA+EL + P A DL+ELCGR A+DLAFVGRWSTVRG +D AW DAA +RA++ +T + GS+ S R NRR+AIL+AGF +LA G+ D+RV+ LYLSL VLPDGH FTVKDA VLL + + G +E + ++ LE W+I+ + +YRMH AHS+FARE L++ +V + A++R + ISSL+A+ + L LW+ V+ VGG GW PYE AL ++D + PL R + AVA F+ A+ D+ A+ WRRLLAVE+ A P VL L AE EEA EW + ++ L LAM+ G EAE LLRR+L+I +L ++DV VA LGVC+R
Sbjct: 234 PHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVN--EGVHDNLPCLMLQLAQMVFEDIG-----GSVGRR------------------PSG--------SDDGLAYVKQQVENG--HGG----KGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESN----------------------------------GSEDS----------------RVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDR-----------------------------------EPGTEDEASVGGVVEALERWTIIRSV-------EATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIR 773
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 354 bits (908), Expect = 9.200e-99 Identity = 269/743 (36.20%), Postives = 357/743 (48.05%), Query Frame = 3
Query: 462 LVERKGKRRKALMRITESSGKNEIVDLNARVLDLAKEMGLAGIVAVFKGVLDDTGAG----GYGSQPDGGDVLTPQEVSLARQPKPFVERARVPCLVPPREGWHVRRDRVINAVLESLLSNRGRCSDRCGGGXXXXXXXXXXXXXXTVDVEGREGVTGTARPRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGR--RRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQRAQTP---NVLYPLWELVTAAERSGKPE 2663
LVER G R K + SS K EI + A + DL ++ LAG VA+ +G D A G +L E + R K + A++P P R+ WHV R V+ V E+L + G P +VGLVG+SGSGKT+ A+EIVRS EV + FSDGVVWL VN G +DRL +LM LA ++ EE+G + PA S+DGAA +K + G HGG + L+CLVVADNV E +VV KL ETGMWVLL+TR ++V + G+ V V + E +AE VLR+ASELP + P A DL+ELCGR A+DLAFVGRWSTVRG D AW DAA +RA++ +E R G V + R+ RRKA+L+AGF +LA+G+ D+RV+ LYLSL VLPDG FTVKDA VLL + K +E +A ++ LE WS+L + R + Y +H AHS FARE L++ +V + A+ RW ISSLD + + LW VE+VGG GW+ PYEAAL+ +++ DPL +VAVAKF+ E D+ A A RRLL + P +V+ L EL + +G+ E
Sbjct: 112 LVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAG-VAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGG--------------------------------------PHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGA--KDRLPSLMLQLAHMMCEEVGGRR--------------------------PA--------TSDDGAAYIKEKMQRG--HGG----KGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVV--------------------------------------------------ETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDR-----------------------------------KPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVGPYSLSVIRSLHELGLGYKHAGRLE 688
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 304 bits (779), Expect = 7.860e-86 Identity = 214/558 (38.35%), Postives = 281/558 (50.36%), Query Frame = 3
Query: 909 EGVTGTARPRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGRRRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAV 2582
E +TG A PR+VGLVG+SG+GKT+ AAE+VRS V E FSDG+VWL VN G RL +LM LAR+V+E+IG G G ++ N++ A +K + G HGG + L+CL VADNV E +VV+ L +TGM VLL+TR ++V A G V + L DAE VLR A+ELP P A DL++LCGR A+DLAFVGRWSTVRG D +AW DAA +RA++ +E G D + DGA R NRRKAIL+AG +LA G+ D+RV+ LYLSL VLPD V DA +LL + +E + R L LE WS+L +T + Y MH S FAR L++ +V + A+RRW+G+ISSLD V ++ L W VE+VGG+GW E P E AL+ +D+ +PL + + AVAK A D+ +AS IW R L V
Sbjct: 123 EALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANK--RLPSLMLQLARMVQEDIG---------------------------GRVGGHPNESGGNAD---AYIKQRMENG--HGG----KGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIE---------GDD-----------------IVDGA---------------------------RGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPT-----------------------------------AEDEESVARVLDVLERWSVLRSTW------AYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKASTIWHRSLGV 548
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 253 bits (647), Expect = 5.940e-66 Identity = 207/645 (32.09%), Postives = 277/645 (42.95%), Query Frame = 3
Query: 720 ARVPCLVPPREGWHVRRDRVINAVLESLLSNRGRCSDRCGGGXXXXXXXXXXXXXXTVDVEGREGVTGTARPRVVGLVGESGSGKTSLAAEIV------------------RSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERA--ARRALKTLEAWSILAATGRRRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDPLCRVCLVAVAKFRGAEGDFRRASAIWRRLLAVEQRA 2594
A VP P WHV RDRV++AV E L CG P+VVGLVG SGSGKT+ AA IV R V E+F DGVVWL V RG G +R+ ALM LA+ V E++ +H G F +P G G+A + FV G G R+ RCLVVAD+V E D++ +L+ TGMWVL T+R D+V + G V V +L +A+AE +LR A+EL + P A+ ++E C R A L FVGRWSTV+GS D W +A +I A++ + + Q+S S V +R AILRAGF +LA G + LLYLSL V+PDG F K+A V L + +W ++ ++ R A + + LE W+++ G +RMH AHS FAR L +V SA+RRW GF S LD + D + LW A E +GG+ WR PY AL S+ + P C L AV +F E + + RLL V++ A
Sbjct: 220 AAVPNGKPVEHSWHVARDRVVDAVYEHLS---------CG-----------------------------QTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDL--KHSYG-----------------FAPGASPTG----------GGSAFISDFVRG---KGSAAGRK--RCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANA---------------QKSDEDLSGV----------------------------------KRVAILRAGFLDLAAQNGFNP--LLYLSLAVMPDGRAFGAKEAAVFLFD---------------------------------DWAEERASQRRTRQAAKVVANLEQWAVVTMHG-------NLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRVQKDA 701
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 245 bits (625), Expect = 5.320e-63 Identity = 211/666 (31.68%), Postives = 290/666 (43.54%), Query Frame = 3
Query: 909 EGVTGTARPRVVGLVGESGSGKTSLAAEIVRSPEVLEYFSDGVVWLPVNRGDGDEDRLQALMRWLARLVREEIGAQHECGEAGXXXXXXXXXXXXXXFFTSGTPAGCTSDLARNSEDGAARVKSFVGGGEIHGGVRQRRELRCLVVADNVCEADVVAKLQETGMWVLLTTRRADVVRKAGGKSVVVGRLLEADAEWVLRRASELPSDEPSPVGASDLLELCGRTALDLAFVGRWSTVRGSKDPMAWRDAADSIRADLQNLELTRDGGPPVGVDKDRHLLMRQQSTASCSTVDDGAAPVSVLGSDASSPRPSSCSSSRALLQARENRRKAILRAGFRELATGTGDDRVRLLYLSLGVLPDGHDFTVKDAMVLLRESHQDHGTGXXXXXXXXXXXXXXXXXXXXXXXXVEWVKKGGAEERAARRALKTLEAWSILAATGR--RRGGKSTSYRMHTAHSSFAREILLECHEVLKSAVRRWIGFISSLDAVLFFDPLVLSRLWSAVEEVGGKGWRELLPYEAALSSIDNRDP---------LCRVCLVAVAKFRGAE---------GDFRRASAIWRRLLAVEQRAQ--TPNVLYPLWELVTAAERSGKPEEAAEWRQYGYETLNLAMSGR-LKEAEQLLRRALKIAETKLGEEDVLVARTVFHLGVCLR 2837
E +T P +VGLVG+SGSGKT+ A+EIVRS +EDRL +LM LA +V EEIG + PA S+DG A +K + G HGG L+CL V DNV E +VV +L E GMWVLL+TR ++V G+ V V L E +AE VLR+A+ELP + P A DL+ELCGR A+DLAF GR STVRG D AW AA +R ++ E G V + R+ RRKA+++AGF +LA G+ D+RV+ LYLSL VLPDG FTVKDA VL+ + +E +A ++ LE WS L + R + + Y +H AHS FARE L++ +V + A+ RW ISS+D + + LW E+VGG GW+ PYEAAL+ +++ DP + +V +++ R G A + R L + T + +L +G+ +A T + R L E E+LL R L+I E + VA +F LG C+R
Sbjct: 200 EPLTADGGPPLVGLVGDSGSGKTTAASEIVRS---------------------NEDRLPSLMLQLAHMVYEEIGGRR--------------------------PA--------TSDDGTAYIKERMHRG--HGG----EGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVV--------------------------------------------------ETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDR-----------------------------------MPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLDLSGCVRAAGQFAQAXXXXXRCLATREAKLGPRGLVETEELLARRLEIVEASTALDHEHVADVLFDLGRCMR 719 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1229.1961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1229.1961.1 >prot_H-canaliculatus_F_contig1229.1961.1 ID=prot_H-canaliculatus_F_contig1229.1961.1|Name=mRNA_H-canaliculatus_F_contig1229.1961.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1210bp MSSDTPDACYTVRRLLSDHAPMVKPLHLTLLAITAKLELVKTRKEELVALback to top mRNA from alignment at H-canaliculatus_F_contig1229:13584..20618+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1229.1961.1 ID=mRNA_H-canaliculatus_F_contig1229.1961.1|Name=mRNA_H-canaliculatus_F_contig1229.1961.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7035bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1229:13584..20618+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1229:13584..20618+ >mRNA_H-canaliculatus_F_contig1229.1961.1 ID=mRNA_H-canaliculatus_F_contig1229.1961.1|Name=mRNA_H-canaliculatus_F_contig1229.1961.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=7260bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1229:13584..20618+ (Hapterophycus canaliculatus Oshoro5f female)back to top |