mRNA_H-canaliculatus_F_contig12246.1928.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: D7G5U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U9_ECTSI) HSP 1 Score: 224 bits (570), Expect = 1.010e-68 Identity = 146/199 (73.37%), Postives = 157/199 (78.89%), Query Frame = 1
Query: 1 TITPFPGRLPSSVGED--SRPAGAGVADGGDPSQAAXXXXXXXXXXXXXXXGAT----PKPPLRVKVKVNQKELFLPNLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPREESWFTRLGALAPALESLGRVLEDIQSFQEETLLKPLEKNFYPMEEFVKTEVKSIRKVR 579
T +P R SVG+D +R G+G GGD SQ XXXXXXXXXXXXXXX PK P V+QKELFLPNLV+EFGEDSPAFRRKVE LDSNVEGLRGQLQQLVA ARKYCG+G AFCEHGRELAGVLMNPR ESWFTRLGALAPALE LGRVL DIQ FQE+ LL+PLE FYPME+FVK EVK+IRKVR
Sbjct: 215 TTSPGDSRPSPSVGDDQLTRDGGSG---GGDVSQXXXXXXXXXXXXXXXXXXXXXXXEPKHP-----NVDQKELFLPNLVMEFGEDSPAFRRKVETLDSNVEGLRGQLQQLVAVARKYCGNGLAFCEHGRELAGVLMNPRGESWFTRLGALAPALEELGRVLGDIQGFQEDILLRPLENAFYPMEDFVKGEVKTIRKVR 405
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE) HSP 1 Score: 200 bits (509), Expect = 3.150e-56 Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 223 IEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPREESWFTRLGALAPALESLGRVLEDIQSFQEETLLKPLEKNFYPMEEFVKTEVKSIRKVR 579
+EFGEDSPAFRRKVE LDSNVEGLRGQLQQLVA ARKYCG+G AFCEHGRELAGVLMNPR ESWFTRLGALAPALE LGRVL DIQ FQE+ LL+PLE FYPME+FVK EVK+IRK++
Sbjct: 1 MEFGEDSPAFRRKVETLDSNVEGLRGQLQQLVAVARKYCGNGLAFCEHGRELAGVLMNPRGESWFTRLGALAPALEELGRVLGDIQGFQEDVLLRPLENAFYPMEDFVKGEVKTIRKMK 119
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: A0A4D9CVE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVE4_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.500e-20 Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 1
Query: 190 NQKELFLPNLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPRE----------------------------ESWFTRLGALAPALESLGRVLEDIQSFQEETLLKPLEKNFY-PMEEFVKTEVKSIRKVR 579
N F +V+E+ EDSP+FRRK++ALD NVEG+R LQ+LV +KY +G AF GR A LM+ +E ESWF+RLG LAPAL G ++++QS+ + L LE F PM EFVK E+K ++ ++
Sbjct: 291 NPDLFFQSTVVLEYEEDSPSFRRKLQALDENVEGMRKHLQRLVDIVQKYIEAGVAFSAVGRIFASELMHLQEGKASGKSGTGXXXXXXXXXXGLSQQGGGESWFSRLGDLAPALVRFGETIDEVQSYNDAVLFS-LESTFLAPMREFVKRELKEVKSLK 448
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.960e-15 Identity = 47/89 (52.81%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 196 KELFLPNLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQL----------------------VAGARKYCGSGFAFCEHGRELAGVLMN 396
K LF PNL+IEF EDSP+FRRKVE LD NV GLRG QQL V AR YC +G AFCEHGREL+ LM+
Sbjct: 250 KSLFKPNLIIEFAEDSPSFRRKVETLDQNVIGLRGHQQQLXXXXXXXXXXXXXXXXXXXXXLVNIARAYCKAGNAFCEHGRELSSALMH 338
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: D0N718_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N718_PHYIT) HSP 1 Score: 55.8 bits (133), Expect = 1.010e-5 Identity = 33/105 (31.43%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 205 FLPNLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPRE-----ESWFTRLGALAPALESLGRVLEDIQSFQEETLL 504
F N+V+++ EDSP FRR++E + ++ GLR L++LVA +++Y +G F + ELA L+ + + LG+L+ + L +QS + LL
Sbjct: 476 FSKNVVLDYVEDSPMFRRQLEGFEESITGLRALLKELVAHSKEYAAAGKHFGQEETELADELIQRKHARAIFSTSCPELGSLSELFGEMHDTLAQVQSSRVSMLL 580
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: A0A484EF15_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF15_BRELC) HSP 1 Score: 55.1 bits (131), Expect = 1.760e-5 Identity = 33/106 (31.13%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 205 FLPNLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPR-EESWFT----RLGALAPALESLGRVLEDIQSFQEETLLK 507
F N+V+++ EDSP FRR++E+ + ++ GLR L+++VA +++Y +G F E LA L+ + + F+ LG+++ + + L IQS + LL+
Sbjct: 128 FSKNVVLDYVEDSPMFRRQIESFEESITGLRALLKEIVAHSKEYTAAGKYFGEQETALAHELIQRKYARAIFSTSCPELGSVSELFKEMSDTLVQIQSSRVSMLLR 233
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: H3GSJ5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSJ5_PHYRM) HSP 1 Score: 55.1 bits (131), Expect = 1.770e-5 Identity = 33/102 (32.35%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 214 NLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPRE-----ESWFTRLGALAPALESLGRVLEDIQSFQEETLL 504
N+V++F EDSP FRR++E + ++ GLR L++LVA +++Y +G F E LA L+ + + + LG+L+ + L +QS + LL
Sbjct: 133 NVVLDFVEDSPMFRRQLEGFEESITGLRALLKELVAHSKEYSAAGRNFGEEETALADELVQRKHARAIFSTSCSELGSLSELFGEMHDTLAQVQSSRVSMLL 234
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: K3X085_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X085_GLOUD) HSP 1 Score: 55.1 bits (131), Expect = 1.780e-5 Identity = 33/102 (32.35%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 214 NLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPR-EESWFT----RLGALAPALESLGRVLEDIQSFQEETLL 504
N+V++F EDSP FRR++E + ++ GLRG L++++A ++Y SG + E LA +++ + + FT LG+L+ + + IQS + LL
Sbjct: 171 NVVLDFVEDSPMFRRQLEGFEESLGGLRGLLKEILARTKEYVASGMRYGEEETALAEEIVHRKYARALFTTSCPELGSLSSIFNEVHDTITQIQSSRVSMLL 272
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: A0A225WIV7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WIV7_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 3.390e-5 Identity = 33/102 (32.35%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 214 NLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAG-VLMNPREESWFT----RLGALAPALESLGRVLEDIQSFQEETLL 504
N+V++F EDSP FRR++E + ++ GLR L++LVA +++Y +G F E LA +++ + F+ LG+L+ + L +QS + LL
Sbjct: 443 NVVLDFVEDSPMFRRQLEGFEESITGLRALLKELVAHSKEYAAAGKHFGEEETALADELILRKHARAIFSTSCPELGSLSELFGEMHDTLAQVQSSRVSMLL 544
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Match: A0A8K1CP00_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP00_PYTOL) HSP 1 Score: 53.9 bits (128), Expect = 4.330e-5 Identity = 31/102 (30.39%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 214 NLVIEFGEDSPAFRRKVEALDSNVEGLRGQLQQLVAGARKYCGSGFAFCEHGRELAGVLMNPR-EESWFT----RLGALAPALESLGRVLEDIQSFQEETLL 504
N+V++F EDSP FRR++E+ + ++ GLRG +++++A ++Y +G + E LA +++ + + FT LG+L+ + + IQS + LL
Sbjct: 148 NVVLDFVEDSPMFRRQLESFEESLGGLRGLMKEILARTKEYVATGMRYGEEETALAEEIVHRKYSRALFTTSCPELGSLSSVFTEVHDTITQIQSSRVSMLL 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12246.1928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12246.1928.1 >prot_H-canaliculatus_F_contig12246.1928.1 ID=prot_H-canaliculatus_F_contig12246.1928.1|Name=mRNA_H-canaliculatus_F_contig12246.1928.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=193bp TITPFPGRLPSSVGEDSRPAGAGVADGGDPSQAAAARSQQYQQQQRGAAGback to top mRNA from alignment at H-canaliculatus_F_contig12246:895..3393+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12246.1928.1 ID=mRNA_H-canaliculatus_F_contig12246.1928.1|Name=mRNA_H-canaliculatus_F_contig12246.1928.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2499bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12246:895..3393+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12246:895..3393+ >mRNA_H-canaliculatus_F_contig12246.1928.1 ID=mRNA_H-canaliculatus_F_contig12246.1928.1|Name=mRNA_H-canaliculatus_F_contig12246.1928.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1158bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12246:895..3393+ (Hapterophycus canaliculatus Oshoro5f female)back to top |